AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0249850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249850 MtrunA17_Chr2g0295881 98.876 178 2 0 1 178 701 878 2.26e-119 357
Msa0249850 MtrunA17_Chr2g0295881 86.538 52 7 0 1 52 632 683 2.63e-23 95.9
Msa0249850 MtrunA17_Chr4g0067421 79.651 172 34 1 7 178 643 813 2.53e-85 267
Msa0249850 MtrunA17_Chr2g0331761 39.490 157 64 4 22 171 562 694 9.48e-26 102
Msa0249850 MtrunA17_Chr6g0485471 50.549 91 45 0 82 172 582 672 6.19e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249850 AT3G16630.2 65.193 181 58 3 3 178 614 794 1.49e-67 219
Msa0249850 AT3G16630.1 65.193 181 58 3 3 178 614 794 1.49e-67 219
Msa0249850 AT4G15885.1 77.477 111 24 1 69 178 3 113 6.67e-54 167
Msa0249850 AT3G16060.1 55.682 88 39 0 84 171 591 678 1.14e-27 108

Find 233 sgRNAs with CRISPR-Local

Find 612 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTCTCAAACTTCAAATTT+TGG 0.057110 2_2:+37604374 None:intergenic
CATACAAATTACAATATTTA+TGG 0.121915 2_2:+37604409 None:intergenic
GTAAGCTCTTTCTTGTTTAA+AGG 0.137930 2_2:+37610178 None:intergenic
CCTGAATTTAGAGGGGATTT+TGG 0.166128 2_2:-37611831 Msa0249850:five_prime_UTR
TCTTGATGGAATTTATTTAT+TGG 0.197719 2_2:-37604279 Msa0249850:three_prime_UTR
CAAAAGGCTCTTATTAATTT+CGG 0.239065 2_2:+37606321 None:intergenic
GTTAGTTTGTAGATTAATTA+AGG 0.240984 2_2:+37613721 None:intergenic
TGCTTCCCCGGAATGGAATA+TGG 0.255940 2_2:+37606257 None:intergenic
CCAAGAGAAACCAATGGATA+TGG 0.285856 2_2:-37605889 Msa0249850:five_prime_UTR
CGAAATTAATAAGAGCCTTT+TGG 0.290303 2_2:-37606320 Msa0249850:five_prime_UTR
TCTCCTATCCATCCTCTTGA+TGG 0.292725 2_2:-37604293 Msa0249850:three_prime_UTR
CTTGATGGAATTTATTTATT+GGG 0.299141 2_2:-37604278 Msa0249850:three_prime_UTR
CGTGGGTAAGAGTTCATCTT+TGG 0.302944 2_2:+37605499 None:intergenic
TACGCCCAATACTCAAACTT+TGG 0.304546 2_2:-37611886 Msa0249850:five_prime_UTR
CTTAGCTACTTTGAGATATA+TGG 0.307492 2_2:-37608722 Msa0249850:five_prime_UTR
CATCAGTGGATGCACTTTGC+AGG 0.317173 2_2:+37613274 None:intergenic
TCGAAACAAACCTTTAGTTT+AGG 0.317787 2_2:+37610097 None:intergenic
ATTGCATCACATAATGTAAA+TGG 0.320493 2_2:-37604180 Msa0249850:three_prime_UTR
CGGCAGCAAGTTTGCATTGT+AGG 0.320847 2_2:-37607795 Msa0249850:five_prime_UTR
ATCTGAAAACGATGGCGTTT+TGG 0.326559 2_2:+37613597 None:intergenic
CCGCCCAAAGTTTGAGTATT+GGG 0.329032 2_2:+37611882 None:intergenic
GAATGTTGTAGGTACGTAAA+AGG 0.335639 2_2:-37610201 Msa0249850:intron
CATTACCCTGTGGCGGCATC+TGG 0.335888 2_2:+37613334 None:intergenic
ATTAGTTTGTGGTACACAAT+TGG 0.340077 2_2:+37605977 None:intergenic
CGATGTGGTTTGCTGTTGCC+TGG 0.341952 2_2:+37605345 None:intergenic
TCAAATGGACGAGAAGAAAA+AGG 0.345193 2_2:-37605777 Msa0249850:five_prime_UTR
ACCAGATCCATATTCCATTC+CGG 0.349780 2_2:-37606264 Msa0249850:five_prime_UTR
AGGGATACCGTTGAAGAAAA+AGG 0.353355 2_2:-37605570 Msa0249850:five_prime_UTR
TTCTATTCTCCTGAATTTAG+AGG 0.358844 2_2:-37611840 Msa0249850:five_prime_UTR
CTTTGCAGGGAGGCGCCGGC+AGG 0.361664 2_2:+37613288 None:intergenic
CCAGATCCATATTCCATTCC+GGG 0.362045 2_2:-37606263 Msa0249850:five_prime_UTR
CCATATCCATTGGTTTCTCT+TGG 0.362238 2_2:+37605889 None:intergenic
GAGAAAGCACAAAGCTCAAT+TGG 0.369470 2_2:+37604799 None:intergenic
GGCCTGCAAACTGGATGAAA+AGG 0.371282 2_2:-37605590 Msa0249850:five_prime_UTR
TTCAAATACTCTAGTATCTC+CGG 0.377595 2_2:+37611308 None:intergenic
TATCTCTGACTCCGGTAAAC+TGG 0.379182 2_2:+37608755 None:intergenic
CCCACGCAGAAAAGGTTCTA+AGG 0.383062 2_2:-37605628 Msa0249850:five_prime_UTR
TTTCTTCTCGTCCATTTGAT+AGG 0.385240 2_2:+37605781 None:intergenic
TGGTACATGTGGTAGGGTTA+TGG 0.385516 2_2:-37611993 Msa0249850:intron
GATACCTGCATGAGAAGGTT+AGG 0.388034 2_2:+37613156 None:intergenic
GGCCAGCCACCACGTGGCGC+TGG 0.388561 2_2:+37613355 None:intergenic
TGTCAAAGAATTCATTGAAA+AGG 0.394345 2_2:-37607739 Msa0249850:five_prime_UTR
CCAAAATCCCCTCTAAATTC+AGG 0.399848 2_2:+37611831 None:intergenic
CCGTGTTTGACGATCATTAT+CGG 0.400160 2_2:+37607506 None:intergenic
TTCTCATCTGTATCATTTCG+TGG 0.405010 2_2:+37605481 None:intergenic
CAGATTCCGCATTAAAATTG+AGG 0.405141 2_2:+37611922 None:intergenic
AATCTGAAAGGCCTGCAAAC+TGG 0.406353 2_2:-37605599 Msa0249850:five_prime_UTR
GGCCTGCAAACTTGATGAAA+AGG 0.407516 2_2:-37605402 Msa0249850:CDS
CTCTTCTACCATAGGATTGA+AGG 0.410441 2_2:-37606346 Msa0249850:intron
GGCGGAGGGTCTGCATCAGA+TGG 0.410993 2_2:-37611864 Msa0249850:five_prime_UTR
CCCAAAATTTGAAGTTTGAG+AGG 0.411613 2_2:-37604375 Msa0249850:three_prime_UTR
ATAAGCAAAACAAGTAGCTT+TGG 0.413430 2_2:+37609567 None:intergenic
ACGCCCAATACTCAAACTTT+GGG 0.414343 2_2:-37611885 Msa0249850:five_prime_UTR
ACTGATCTTTCATCTTAAGT+TGG 0.416356 2_2:-37604509 Msa0249850:three_prime_UTR
GAAACATCTTTATTAGTTTG+TGG 0.417078 2_2:+37605966 None:intergenic
TCCGCCGGTTTGCAGCATTT+AGG 0.417395 2_2:-37613219 Msa0249850:five_prime_UTR
CATGATAAATATGCATCTAC+AGG 0.418929 2_2:+37604206 None:intergenic
CATAATGTAAATGGAGTGTT+TGG 0.419686 2_2:-37604171 Msa0249850:three_prime_UTR
GGCTGGCCAGATGCCGCCAC+AGG 0.420211 2_2:-37613340 Msa0249850:five_prime_UTR
CTTCTGTAAGTTTGCTTCCC+CGG 0.421797 2_2:+37606245 None:intergenic
CGCAAAGCAGCTAGTCTTGT+GGG 0.421857 2_2:-37604777 Msa0249850:CDS
AGTTGCATCAGCCAGTTTAC+CGG 0.422294 2_2:-37608766 Msa0249850:five_prime_UTR
AAATATTGTAATTTGTATGT+AGG 0.423461 2_2:-37604405 Msa0249850:three_prime_UTR
AACCTCTCCCTCTCCATTGA+AGG 0.426175 2_2:+37605744 None:intergenic
GTCAAAGAATTCATTGAAAA+GGG 0.431470 2_2:-37607738 Msa0249850:five_prime_UTR
TCTTCAAATTACCTATCAAA+TGG 0.431546 2_2:-37605792 Msa0249850:five_prime_UTR
TCCTCTGCACCAACACTAGC+TGG 0.434055 2_2:+37605927 None:intergenic
GGTTCTCCGCTTGCTTCATC+CGG 0.437160 2_2:-37613198 Msa0249850:five_prime_UTR
TGCACTTTGCAGGGAGGCGC+CGG 0.437789 2_2:+37613284 None:intergenic
GGCTTCCTGCCCATATCCAT+TGG 0.439469 2_2:+37605879 None:intergenic
AACCAGAGAATGGCGTTTGT+TGG 0.440589 2_2:+37613653 None:intergenic
CAAATCTCGAGTTCCTGATT+CGG 0.440857 2_2:-37613566 Msa0249850:five_prime_UTR
GTTAAAAGTCTTTCCAAAAG+TGG 0.446031 2_2:-37606023 Msa0249850:five_prime_UTR
CCGCGCCATGACAGCATCAC+TGG 0.447264 2_2:+37613251 None:intergenic
GAGATGCCTTACTTCATCAT+TGG 0.449247 2_2:+37609869 None:intergenic
GGTTGATTTGACAGCTTATG+TGG 0.450940 2_2:-37609937 Msa0249850:five_prime_UTR
TCCCAGCGCCACGTGGTGGC+TGG 0.451179 2_2:-37613357 Msa0249850:five_prime_UTR
GTGCTGCGGGACTCCTTTGT+AGG 0.451705 2_2:-37606223 Msa0249850:five_prime_UTR
TGTTCACAAGACCCGGCACC+TGG 0.455776 2_2:+37606166 None:intergenic
TCTAGTATCTCCGGGTATGA+TGG 0.457346 2_2:+37611317 None:intergenic
AAGCACTAATTGCCGCTCAT+AGG 0.460152 2_2:-37605135 Msa0249850:CDS
TTAGTTTGTGGTACACAATT+GGG 0.461485 2_2:+37605978 None:intergenic
TTCCCCGTTGATAAGAGATT+CGG 0.462943 2_2:-37604686 Msa0249850:exon
CTCCAACAAACGCCATTCTC+TGG 0.469534 2_2:-37613655 Msa0249850:five_prime_UTR
TCTTGTATATCTCCAGGTGC+CGG 0.470837 2_2:-37606178 Msa0249850:five_prime_UTR
ATCTCTCGACCACAAGCTCC+AGG 0.471983 2_2:-37605363 Msa0249850:CDS
GCCAGCCACCACGTGGCGCT+GGG 0.473924 2_2:+37613356 None:intergenic
ATTATTCATATTGCAAGGCC+TGG 0.476052 2_2:-37604251 Msa0249850:three_prime_UTR
AGGCATCACTTATCCTTCAA+TGG 0.478467 2_2:-37605757 Msa0249850:five_prime_UTR
TCCGCCCAAAGTTTGAGTAT+TGG 0.480256 2_2:+37611881 None:intergenic
GTAAGTTTGCTTCCCCGGAA+TGG 0.482960 2_2:+37606250 None:intergenic
GGGCAGGAAGCCACTTGAAA+AGG 0.483500 2_2:-37605868 Msa0249850:five_prime_UTR
CCCGGAATGGAATATGGATC+TGG 0.484858 2_2:+37606263 None:intergenic
TCCAGCTAGTGTTGGTGCAG+AGG 0.486381 2_2:-37605928 Msa0249850:five_prime_UTR
CTCGATTTCTTTCCTATGAG+CGG 0.486709 2_2:+37605123 None:intergenic
AGTTCATGAACCTAAACTAA+AGG 0.489976 2_2:-37610107 Msa0249850:intron
AAGTGAGAAGAAACCGAATC+AGG 0.491021 2_2:+37613553 None:intergenic
ATCCTTCAATGGAGAGGGAG+AGG 0.493463 2_2:-37605746 Msa0249850:five_prime_UTR
CTTCCCTAACCTTCTCATGC+AGG 0.493565 2_2:-37613160 Msa0249850:intron
ATGATCTCTTGTATATCTCC+AGG 0.496462 2_2:-37606184 Msa0249850:five_prime_UTR
CAAGAAAGAGCTTACTAAGA+AGG 0.499325 2_2:-37610170 Msa0249850:five_prime_UTR
AATAAATTCCATCAAGAGGA+TGG 0.499411 2_2:+37604285 None:intergenic
AAACTTTGCATGAGGGAAGA+TGG 0.501921 2_2:-37607819 Msa0249850:five_prime_UTR
TTTGGAGGGAGAAAATGAAA+TGG 0.502709 2_2:+37613697 None:intergenic
CCAAAATTTGAAGTTTGAGA+GGG 0.503602 2_2:-37604374 Msa0249850:three_prime_UTR
AGAACCTAAATGCTGCAAAC+CGG 0.504875 2_2:+37613215 None:intergenic
GCCTGCAAACTTGATGAAAA+GGG 0.505733 2_2:-37605401 Msa0249850:CDS
GGAAATGCTTCAAGAAGTAC+AGG 0.506048 2_2:-37607717 Msa0249850:five_prime_UTR
AGAAAGCACAAAGCTCAATT+GGG 0.508038 2_2:+37604800 None:intergenic
TACAGATGAGAAAGTGCAAA+AGG 0.508669 2_2:-37605470 Msa0249850:CDS
TACAGATGAGAAAGTGCAAA+AGG 0.508669 2_2:-37605658 Msa0249850:five_prime_UTR
CTTGTATATCTCCAGGTGCC+GGG 0.510214 2_2:-37606177 Msa0249850:five_prime_UTR
TCTGCAGCTCTGAGTGGTAA+AGG 0.511800 2_2:+37608803 None:intergenic
TTTATGGCAAATATTTGCAA+AGG 0.511844 2_2:+37604425 None:intergenic
TGCAAGAAGTGGGAAGGTCG+TGG 0.513801 2_2:-37607580 Msa0249850:five_prime_UTR
TTATGGCAAATATTTGCAAA+GGG 0.513968 2_2:+37604426 None:intergenic
CCAACATCGACTAAAAGAAC+AGG 0.515698 2_2:-37604730 Msa0249850:CDS
TTGATCTTCTTAGTGACAGA+AGG 0.517592 2_2:-37608688 Msa0249850:intron
TCTATTCTCCTGAATTTAGA+GGG 0.518042 2_2:-37611839 Msa0249850:five_prime_UTR
CAAGAGAAACCAATGGATAT+GGG 0.518721 2_2:-37605888 Msa0249850:five_prime_UTR
GCAAGAAGTGGGAAGGTCGT+GGG 0.520449 2_2:-37607579 Msa0249850:five_prime_UTR
AGGTAATTTGAAGAAATACT+AGG 0.524091 2_2:+37605801 None:intergenic
GCGCGGTGGCTTCAGTCCGC+CGG 0.525337 2_2:-37613234 Msa0249850:five_prime_UTR
TCTCATCTGTATCATTTCGT+GGG 0.525364 2_2:+37605482 None:intergenic
AATCACAACACTGTTACCTC+TGG 0.525931 2_2:-37605322 Msa0249850:CDS
AATAAATAAATTCCATCAAG+AGG 0.530039 2_2:+37604281 None:intergenic
GAAGCACAATGAGGTGAAAG+AGG 0.530493 2_2:-37607634 Msa0249850:five_prime_UTR
GTCGATGTTGGAATCTTGCA+AGG 0.530551 2_2:+37604742 None:intergenic
TGCATTCCTTCAAAGCCAAA+AGG 0.533200 2_2:+37606305 None:intergenic
TCGCAAAGCAGCTAGTCTTG+TGG 0.534592 2_2:-37604778 Msa0249850:CDS
GTGCTAACGAGGAGTCCTCC+AGG 0.536158 2_2:-37607686 Msa0249850:five_prime_UTR
GCCTGCAAACTGGATGAAAA+GGG 0.537984 2_2:-37605589 Msa0249850:five_prime_UTR
TTGCTGTTGCCTGGAGCTTG+TGG 0.539840 2_2:+37605354 None:intergenic
GGGCTACATAGTTGTCAATA+CGG 0.541525 2_2:+37604820 None:intergenic
TCAAATACTCTAGTATCTCC+GGG 0.543058 2_2:+37611309 None:intergenic
CAGAAGCTCTGTGTCATCCA+TGG 0.544630 2_2:+37611785 None:intergenic
ATTCCATCAAGAGGATGGAT+AGG 0.544773 2_2:+37604290 None:intergenic
AGAAACCAATGGATATGGGC+AGG 0.546156 2_2:-37605884 Msa0249850:five_prime_UTR
ATATAAAACGGCTATGTCCA+TGG 0.546499 2_2:+37613821 None:intergenic
ATCAGTGGATGCACTTTGCA+GGG 0.546523 2_2:+37613275 None:intergenic
ACACTGTTACCTCTGGATCC+AGG 0.546686 2_2:-37605315 Msa0249850:CDS
GTCGCATGCTATCTTACAGT+TGG 0.546802 2_2:-37607664 Msa0249850:five_prime_UTR
CTGTAAGATAGCATGCGACC+TGG 0.548027 2_2:+37607668 None:intergenic
GGACTCCTCGTTAGCACCCG+TGG 0.548467 2_2:+37607692 None:intergenic
CACTTATCCTTCAATGGAGA+GGG 0.552141 2_2:-37605751 Msa0249850:five_prime_UTR
TGTCACTAAGATTAAAGTTG+TGG 0.552752 2_2:-37611181 Msa0249850:intron
ACTGCATTGATATTCACGTC+AGG 0.553424 2_2:+37605271 None:intergenic
ATACTCAAACTTTGGGCGGA+GGG 0.554840 2_2:-37611878 Msa0249850:five_prime_UTR
TCGAATCAGTAACCAGAGAA+TGG 0.560446 2_2:+37613643 None:intergenic
ACAATTTATATCTCTGACTC+CGG 0.560604 2_2:+37608747 None:intergenic
GCGCAATTATTCATATTGCA+AGG 0.560658 2_2:-37604256 Msa0249850:three_prime_UTR
AATACTCAAACTTTGGGCGG+AGG 0.563270 2_2:-37611879 Msa0249850:five_prime_UTR
ATACCTGCATGAGAAGGTTA+GGG 0.564528 2_2:+37613157 None:intergenic
GGCATGAAGATCCAAAAGCC+CGG 0.564861 2_2:+37611806 None:intergenic
CTGCACCAACACTAGCTGGA+AGG 0.565077 2_2:+37605931 None:intergenic
GGACTCTGCGTCATAAAGCC+TGG 0.565107 2_2:+37605297 None:intergenic
GCTGTTTACGATCAACCTGC+CGG 0.565284 2_2:-37613303 Msa0249850:five_prime_UTR
TTGATCGTAAACAGCGGCAG+CGG 0.569954 2_2:+37613311 None:intergenic
GCGGAGGGTCTGCATCAGAT+GGG 0.573718 2_2:-37611863 Msa0249850:five_prime_UTR
TTCAAGAAGTACAGGATCCA+CGG 0.574374 2_2:-37607709 Msa0249850:five_prime_UTR
TGATGCCAGTGATGCTGTCA+TGG 0.575124 2_2:-37613256 Msa0249850:five_prime_UTR
GACAGCATCACTGGCATCAG+TGG 0.579144 2_2:+37613260 None:intergenic
TAGTTGTCAATACGGCTACC+TGG 0.583675 2_2:+37604828 None:intergenic
GATCTTGCTGGAAGTGAAAG+AGG 0.587977 2_2:-37607540 Msa0249850:five_prime_UTR
TTAAAGATGAAAAGTCTGAA+AGG 0.588043 2_2:-37605423 Msa0249850:CDS
TGCACCAACACTAGCTGGAA+GGG 0.590135 2_2:+37605932 None:intergenic
AAGCGTGTGTTCACAAGACC+CGG 0.590561 2_2:+37606159 None:intergenic
TCAAGAAGTACAGGATCCAC+GGG 0.592542 2_2:-37607708 Msa0249850:five_prime_UTR
TGAACAGGAAACTTTGCATG+AGG 0.594736 2_2:-37607827 Msa0249850:intron
GCTACCTGGTTGGTCAACTT+CGG 0.595314 2_2:+37604842 None:intergenic
CAAACTTACAGAAGTGCTGC+GGG 0.595838 2_2:-37606236 Msa0249850:five_prime_UTR
TGACACAGAGCTTCTGTCTG+AGG 0.595888 2_2:-37611778 Msa0249850:intron
CTATTCTCCTGAATTTAGAG+GGG 0.596100 2_2:-37611838 Msa0249850:five_prime_UTR
AGCTACTTTGAGATATATGG+TGG 0.596766 2_2:-37608719 Msa0249850:five_prime_UTR
GAACAGGAAACTTTGCATGA+GGG 0.597527 2_2:-37607826 Msa0249850:intron
CCCAATACTCAAACTTTGGG+CGG 0.597953 2_2:-37611882 Msa0249850:five_prime_UTR
GGTAACATGCTCATCAAGAA+CGG 0.600281 2_2:+37609890 None:intergenic
ACGTTCCCAGCGCCACGTGG+TGG 0.601422 2_2:-37613361 Msa0249850:five_prime_UTR
AGTCTGCTGAAGAGAAGCAG+AGG 0.602638 2_2:-37611965 Msa0249850:five_prime_UTR
GAATATCAATGCAGTACTTG+AGG 0.607729 2_2:-37605263 Msa0249850:intron
AAGCGAAACTCAAACACTGA+TGG 0.608067 2_2:-37607609 Msa0249850:five_prime_UTR
AGGATCCACGGGTGCTAACG+AGG 0.610896 2_2:-37607697 Msa0249850:five_prime_UTR
GCAGCGGCATTACCCTGTGG+CGG 0.610995 2_2:+37613327 None:intergenic
GGTCGAGAGATCAGAAGCAT+TGG 0.611300 2_2:+37605375 None:intergenic
GCTGATGCAACTGTCGAACA+AGG 0.611981 2_2:+37608777 None:intergenic
GCATCTGGCCAGCCACCACG+TGG 0.612902 2_2:+37613349 None:intergenic
TGTCAATACGGCTACCTGGT+TGG 0.614603 2_2:+37604832 None:intergenic
TCATTCGACTTCAACAACCA+TGG 0.616694 2_2:-37613838 None:intergenic
AAGCACAATGAGGTGAAAGA+GGG 0.617798 2_2:-37607633 Msa0249850:five_prime_UTR
TATTTGCAAAGGGCCTGAGA+TGG 0.617979 2_2:+37604436 None:intergenic
CAAGAAGTGGGAAGGTCGTG+GGG 0.619219 2_2:-37607578 Msa0249850:five_prime_UTR
ACACCCTACGATATGCTGAT+CGG 0.619564 2_2:-37606135 Msa0249850:intron
ACGATCATTATCGGTAGTGT+CGG 0.621738 2_2:+37607515 None:intergenic
GAAAGAAATCGAGGACACGA+TGG 0.622983 2_2:-37605113 Msa0249850:CDS
CATACCGATCAGCATATCGT+AGG 0.623535 2_2:+37606131 None:intergenic
ACCTAAATGCTGCAAACCGG+CGG 0.626190 2_2:+37613218 None:intergenic
GAAAGAGCTTACTAAGAAGG+AGG 0.626345 2_2:-37610167 Msa0249850:five_prime_UTR
TCACTTATCCTTCAATGGAG+AGG 0.628797 2_2:-37605752 Msa0249850:five_prime_UTR
GCGACGATACCTGCATGAGA+AGG 0.630424 2_2:+37613151 None:intergenic
TAATTGGCTCAACTGTAGCT+CGG 0.631916 2_2:+37609611 None:intergenic
CGCTCATAGGAAAGAAATCG+AGG 0.632537 2_2:-37605122 Msa0249850:CDS
GTCATAAAGCCTGGATCCAG+AGG 0.636118 2_2:+37605306 None:intergenic
CCGATAATGATCGTCAAACA+CGG 0.641769 2_2:-37607506 Msa0249850:intron
TGGCGCTGGGAACGTCGTTG+AGG 0.643279 2_2:+37613369 None:intergenic
GCTGGCCAGATGCCGCCACA+GGG 0.644189 2_2:-37613339 Msa0249850:five_prime_UTR
AACAGTGTTGTGATTCGATG+TGG 0.644511 2_2:+37605330 None:intergenic
GATGGAAATGATGCAAGAAG+TGG 0.644792 2_2:-37607591 Msa0249850:five_prime_UTR
GCAAACTTACAGAAGTGCTG+CGG 0.645759 2_2:-37606237 Msa0249850:five_prime_UTR
TTTGCATGAGGGAAGATGGA+CGG 0.649839 2_2:-37607815 Msa0249850:five_prime_UTR
TCAACCCTTCCAGCTAGTGT+TGG 0.651641 2_2:-37605936 Msa0249850:five_prime_UTR
CGATTCAGATCTGAAAACGA+TGG 0.652168 2_2:+37613589 None:intergenic
AGGTCTTCTGCAGCTCTGAG+TGG 0.653185 2_2:+37608797 None:intergenic
ACGACGTTCCCAGCGCCACG+TGG 0.653938 2_2:-37613364 Msa0249850:five_prime_UTR
AAATGATGCAAGAAGTGGGA+AGG 0.654261 2_2:-37607586 Msa0249850:five_prime_UTR
TTGGCCGAAGTTGACCAACC+AGG 0.654287 2_2:-37604846 Msa0249850:CDS
CAGATCCATATTCCATTCCG+GGG 0.655413 2_2:-37606262 Msa0249850:five_prime_UTR
ATTGATATTCACGTCAGGTG+CGG 0.656679 2_2:+37605276 None:intergenic
TCAGCGCCAAGAGAAACCAA+TGG 0.658332 2_2:-37605895 Msa0249850:five_prime_UTR
ATACCGATCAGCATATCGTA+GGG 0.658363 2_2:+37606132 None:intergenic
GGAGTCAGAGATATAAATTG+TGG 0.661080 2_2:-37608745 Msa0249850:five_prime_UTR
GAACAATCATCCATCATACC+CGG 0.665372 2_2:-37611327 Msa0249850:five_prime_UTR
CCAGTGATGCTGTCATGGCG+CGG 0.668175 2_2:-37613251 Msa0249850:five_prime_UTR
ATGGAAATGATGCAAGAAGT+GGG 0.676829 2_2:-37607590 Msa0249850:five_prime_UTR
GCGGCAGCGGCATTACCCTG+TGG 0.676940 2_2:+37613324 None:intergenic
GAAGAGACGATGATCGACAC+CGG 0.681814 2_2:+37613179 None:intergenic
ATGATAAATATGCATCTACA+GGG 0.687075 2_2:+37604207 None:intergenic
AAATGAAATAGAATCTAATG+CGG 0.687168 2_2:-37604341 Msa0249850:three_prime_UTR
TAAGATAGCATGCGACCTGG+AGG 0.688559 2_2:+37607671 None:intergenic
AGTGGATGCACTTTGCAGGG+AGG 0.695027 2_2:+37613278 None:intergenic
GTGATGCTGTCATGGCGCGG+TGG 0.697240 2_2:-37613248 Msa0249850:five_prime_UTR
TCGACACCGGATGAAGCAAG+CGG 0.701765 2_2:+37613192 None:intergenic
GGTTGTAAAGAAGCACAATG+AGG 0.702597 2_2:-37607643 Msa0249850:five_prime_UTR
GGCAGGTTGATCGTAAACAG+CGG 0.727107 2_2:+37613305 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCAAAACTATATAAAA+CGG + chr2_2:37604190-37604209 None:intergenic 10.0%
!! TAATTAAATATGATAAAAGT+TGG + chr2_2:37605046-37605065 None:intergenic 10.0%
!!! ATTTTTGAAATAAGTTTTAT+AGG + chr2_2:37605186-37605205 None:intergenic 10.0%
!!! TTTTTTTTTTGCTTATAATA+TGG - chr2_2:37605267-37605286 Msa0249850:CDS 10.0%
!!! TTTTTTTTTGCTTATAATAT+GGG - chr2_2:37605268-37605287 Msa0249850:CDS 10.0%
!! TTATTATTATATCATAATGT+AGG - chr2_2:37606264-37606283 Msa0249850:five_prime_UTR 10.0%
!! ATAACAAATATTTATTTAAG+CGG + chr2_2:37609552-37609571 None:intergenic 10.0%
!! ATAATAAATATAAACCATAT+TGG - chr2_2:37610786-37610805 Msa0249850:intron 10.0%
!!! TTTATCTTATAGTTTTTTCT+AGG + chr2_2:37605750-37605769 None:intergenic 15.0%
!!! CTTTAGATGAATATTTTATA+TGG - chr2_2:37605983-37606002 Msa0249850:five_prime_UTR 15.0%
!!! TATACTGAAAAGTTTTAAAA+CGG - chr2_2:37606367-37606386 Msa0249850:intron 15.0%
!!! TTTTTTTTTTCTTTTCCAAA+TGG - chr2_2:37606516-37606535 Msa0249850:intron 15.0%
!! TATTTACTTCATACTATATA+TGG + chr2_2:37606944-37606963 None:intergenic 15.0%
!!! TTAATTTTTTTTGTCTTTTC+TGG - chr2_2:37608672-37608691 Msa0249850:intron 15.0%
!!! TAATTTTTTTTGTCTTTTCT+GGG - chr2_2:37608673-37608692 Msa0249850:intron 15.0%
!! TACCATTATTATAAAAGTAA+AGG + chr2_2:37609850-37609869 None:intergenic 15.0%
!! TAAGAAAAATATATTAGTGA+AGG + chr2_2:37609919-37609938 None:intergenic 15.0%
!! TAACTAAAAATTGGTAAATT+AGG + chr2_2:37612782-37612801 None:intergenic 15.0%
!! GTATATACTTAACTAAAAAT+TGG + chr2_2:37612791-37612810 None:intergenic 15.0%
!! CATACAAATTACAATATTTA+TGG + chr2_2:37613590-37613609 None:intergenic 15.0%
!!! AAATATTGTAATTTGTATGT+AGG - chr2_2:37613591-37613610 Msa0249850:five_prime_UTR 15.0%
!!! TATATAGTTTTGAAAATGTG+AGG - chr2_2:37604193-37604212 Msa0249850:three_prime_UTR 20.0%
!!! GTTAGTTTGTAGATTAATTA+AGG + chr2_2:37604278-37604297 None:intergenic 20.0%
!! TAATAAATGCAATATCAAAG+AGG + chr2_2:37604891-37604910 None:intergenic 20.0%
!! ATTGTATAATTATTTGGCAT+TGG - chr2_2:37604910-37604929 Msa0249850:intron 20.0%
!!! GGTTTTTTTGCTTATAATTT+GGG + chr2_2:37604989-37605008 None:intergenic 20.0%
!!! GTCTTTTTTGCTTATAATTT+GGG + chr2_2:37605024-37605043 None:intergenic 20.0%
!!! CAAAAAATCATCTTTTCTAA+AGG - chr2_2:37605074-37605093 Msa0249850:intron 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + chr2_2:37605161-37605180 None:intergenic 20.0%
!! ATGACATATGATTAACATTA+TGG - chr2_2:37605809-37605828 Msa0249850:five_prime_UTR 20.0%
!!! TTTCTTTTTGATAGTATATG+AGG - chr2_2:37605957-37605976 Msa0249850:five_prime_UTR 20.0%
!!! AATATTTTATATGGTACATG+TGG - chr2_2:37605992-37606011 Msa0249850:five_prime_UTR 20.0%
!! ATAAGATTAACAAGTAGTAT+GGG - chr2_2:37606339-37606358 Msa0249850:intron 20.0%
!! ACAATCTATTTACTTATGAA+TGG - chr2_2:37607003-37607022 Msa0249850:intron 20.0%
!! CATACTATTATCAATGTATA+TGG + chr2_2:37607183-37607202 None:intergenic 20.0%
!! AAGGATCTATATTACTTATA+AGG + chr2_2:37607454-37607473 None:intergenic 20.0%
!! ACAAATTCAAAGATAGAAAA+AGG + chr2_2:37607555-37607574 None:intergenic 20.0%
!! CATTAAGATAACTAATAATG+AGG + chr2_2:37607987-37608006 None:intergenic 20.0%
!! TCAAAAATTGTAGGAATAAT+TGG + chr2_2:37608404-37608423 None:intergenic 20.0%
!! TAATAATGATAATTTGGTAC+AGG + chr2_2:37608490-37608509 None:intergenic 20.0%
!! ACTGGATAATAATGATAATT+TGG + chr2_2:37608496-37608515 None:intergenic 20.0%
!! AACAGTTTAATATGTAAAAC+TGG + chr2_2:37608514-37608533 None:intergenic 20.0%
!!! ATAGTATGAATATTCTGAAA+AGG + chr2_2:37608757-37608776 None:intergenic 20.0%
!!! AGTATAGTTAGTATTTTGTT+GGG + chr2_2:37608997-37609016 None:intergenic 20.0%
!!! TAGTATAGTTAGTATTTTGT+TGG + chr2_2:37608998-37609017 None:intergenic 20.0%
!! CATCATCTAATACATTTAAA+TGG + chr2_2:37609390-37609409 None:intergenic 20.0%
!! AAAATGTTGTCTCATAATTA+AGG + chr2_2:37609483-37609502 None:intergenic 20.0%
!! ATAATAATAATGCTTGATGT+AGG + chr2_2:37609606-37609625 None:intergenic 20.0%
!! GTATTAATTAGAGTTGTAAT+AGG + chr2_2:37609796-37609815 None:intergenic 20.0%
!!! CTCCTTTACTTTTATAATAA+TGG - chr2_2:37609845-37609864 Msa0249850:intron 20.0%
!!! AATTTTTTTGTTGTCTGTTT+TGG - chr2_2:37611354-37611373 Msa0249850:intron 20.0%
!! AACAAGTAAAATTTACTTGA+GGG + chr2_2:37611574-37611593 None:intergenic 20.0%
!!! CATAAAAAGTATATACATGT+AGG + chr2_2:37613529-37613548 None:intergenic 20.0%
!! AAATGAAATAGAATCTAATG+CGG - chr2_2:37613655-37613674 Msa0249850:five_prime_UTR 20.0%
!! AATAAATAAATTCCATCAAG+AGG + chr2_2:37613718-37613737 None:intergenic 20.0%
!! TCTTGATGGAATTTATTTAT+TGG - chr2_2:37613717-37613736 Msa0249850:five_prime_UTR 20.0%
!! CTTGATGGAATTTATTTATT+GGG - chr2_2:37613718-37613737 Msa0249850:five_prime_UTR 20.0%
! GAATGAAGAAGATGATAAAA+AGG + chr2_2:37604494-37604513 None:intergenic 25.0%
! GTGTAACAGATCTTAAAAAT+TGG - chr2_2:37604602-37604621 Msa0249850:intron 25.0%
!!! GGGTTTTTTTGCTTATAATT+TGG + chr2_2:37604990-37605009 None:intergenic 25.0%
!! TAATTTGGGACAAAGAAAAT+GGG + chr2_2:37605010-37605029 None:intergenic 25.0%
!! ATAATTTGGGACAAAGAAAA+TGG + chr2_2:37605011-37605030 None:intergenic 25.0%
!!! GGTCTTTTTTGCTTATAATT+TGG + chr2_2:37605025-37605044 None:intergenic 25.0%
!! TTTTTGCTTATAATATGGGA+CGG - chr2_2:37605272-37605291 Msa0249850:CDS 25.0%
!! CAATATGTATTTGTTAGAGA+GGG - chr2_2:37605362-37605381 Msa0249850:CDS 25.0%
!!! AAATAAATCTTTAGCTTGAG+CGG + chr2_2:37605417-37605436 None:intergenic 25.0%
! TGAAGATAAAATAAGCATAG+CGG - chr2_2:37605505-37605524 Msa0249850:CDS 25.0%
! AGATATAGAGATTAATGAGT+TGG - chr2_2:37605780-37605799 Msa0249850:five_prime_UTR 25.0%
! ATTATATCATAATGTAGGCT+TGG - chr2_2:37606269-37606288 Msa0249850:five_prime_UTR 25.0%
! GATAAGATTAACAAGTAGTA+TGG - chr2_2:37606338-37606357 Msa0249850:intron 25.0%
! ACAAAAATTGTAGTGTAAGA+TGG + chr2_2:37606405-37606424 None:intergenic 25.0%
!!! TTTTCTAGCTTGCTATTAAT+AGG + chr2_2:37606726-37606745 None:intergenic 25.0%
!!! CTATTCTCTTTTTCATTCAT+AGG + chr2_2:37606780-37606799 None:intergenic 25.0%
! ATGAAAAAGAGAATAGTACA+AGG - chr2_2:37606784-37606803 Msa0249850:intron 25.0%
! TGAAAAAGAGAATAGTACAA+GGG - chr2_2:37606785-37606804 Msa0249850:intron 25.0%
! TCTTTCTTTCTTCCTTTATT+TGG - chr2_2:37606978-37606997 Msa0249850:intron 25.0%
! AATAGATTGTAGCCAAATAA+AGG + chr2_2:37606993-37607012 None:intergenic 25.0%
! ATGGAAAAGATAATAGTACA+AGG - chr2_2:37607022-37607041 Msa0249850:intron 25.0%
! TGGAAAAGATAATAGTACAA+GGG - chr2_2:37607023-37607042 Msa0249850:intron 25.0%
!!! TTATTTTTCTTGTCCTATGT+TGG - chr2_2:37607152-37607171 Msa0249850:intron 25.0%
!! TATTTTTCTTGTCCTATGTT+GGG - chr2_2:37607153-37607172 Msa0249850:intron 25.0%
!!! CTTTCTTTTCTTGCTTTATT+TGG - chr2_2:37607227-37607246 Msa0249850:intron 25.0%
! AAACCAACTTATGATGATAT+TGG + chr2_2:37607331-37607350 None:intergenic 25.0%
!!! TCATTTTTTCATTAGCATTC+AGG - chr2_2:37607725-37607744 Msa0249850:five_prime_UTR 25.0%
!!! CATTTTTTCATTAGCATTCA+GGG - chr2_2:37607726-37607745 Msa0249850:five_prime_UTR 25.0%
!!! ATTTTTTCATTAGCATTCAG+GGG - chr2_2:37607727-37607746 Msa0249850:five_prime_UTR 25.0%
! ACAACATTCATTAGAAGAAA+GGG + chr2_2:37607784-37607803 None:intergenic 25.0%
! TACAACATTCATTAGAAGAA+AGG + chr2_2:37607785-37607804 None:intergenic 25.0%
! TTTCTTCTAATGAATGTTGT+AGG - chr2_2:37607784-37607803 Msa0249850:five_prime_UTR 25.0%
! ACGAATGAAAAATAGAACTT+GGG + chr2_2:37607932-37607951 None:intergenic 25.0%
! TACGAATGAAAAATAGAACT+TGG + chr2_2:37607933-37607952 None:intergenic 25.0%
!!! GAGTTTTATGAAAGTTATCT+TGG - chr2_2:37608277-37608296 Msa0249850:intron 25.0%
!!! TGATTTGTTTGATTGATCTA+AGG - chr2_2:37608335-37608354 Msa0249850:intron 25.0%
!!! CATGATTGGTTTATAATAAC+AGG - chr2_2:37608358-37608377 Msa0249850:intron 25.0%
!!! CATATATGTATGCAGTTTTT+TGG - chr2_2:37608548-37608567 Msa0249850:intron 25.0%
!! TTCTGAAAAGGAAAATATGT+TGG + chr2_2:37608745-37608764 None:intergenic 25.0%
!! ACACAATATTTTTCACTTGA+TGG - chr2_2:37608832-37608851 Msa0249850:five_prime_UTR 25.0%
!! TCATGAAAACTGAGATTTTA+AGG + chr2_2:37608892-37608911 None:intergenic 25.0%
!! TTAAGGTTTGTTTAGTAGTT+GGG - chr2_2:37608915-37608934 Msa0249850:intron 25.0%
!! TATAGTTAGTATTTTGTTGG+GGG + chr2_2:37608995-37609014 None:intergenic 25.0%
!! GTATAGTTAGTATTTTGTTG+GGG + chr2_2:37608996-37609015 None:intergenic 25.0%
!! AAAAAAGTATGTGTACTTGT+TGG - chr2_2:37609039-37609058 Msa0249850:intron 25.0%
! TAATGAATTAAGTGATGAAG+TGG + chr2_2:37609119-37609138 None:intergenic 25.0%
!!! CACTAATAATCTTTGTTTTC+AGG - chr2_2:37609145-37609164 Msa0249850:intron 25.0%
! ACAAAAAGCTCAGTTATTAT+GGG + chr2_2:37609708-37609727 None:intergenic 25.0%
! ATTGCATTGAAAAGTGAAAT+GGG + chr2_2:37609758-37609777 None:intergenic 25.0%
! TATTGCATTGAAAAGTGAAA+TGG + chr2_2:37609759-37609778 None:intergenic 25.0%
! ATAAATGTGAAATGAGCAAA+AGG - chr2_2:37609939-37609958 Msa0249850:five_prime_UTR 25.0%
! GAAAAAATAATGCTTGATGT+AGG + chr2_2:37610031-37610050 None:intergenic 25.0%
!!! TTCTTTGTTTTTGAATGTAC+AGG - chr2_2:37610048-37610067 Msa0249850:intron 25.0%
! TGGTTTATTACATTATGAAC+AGG - chr2_2:37610154-37610173 Msa0249850:five_prime_UTR 25.0%
! TGTCAAAGAATTCATTGAAA+AGG - chr2_2:37610257-37610276 Msa0249850:intron 25.0%
! GTCAAAGAATTCATTGAAAA+GGG - chr2_2:37610258-37610277 Msa0249850:intron 25.0%
!! ATTTCTTTTATTGATCTTGC+TGG - chr2_2:37610444-37610463 Msa0249850:intron 25.0%
! TGTTCATAAATATTCATGCA+TGG + chr2_2:37610580-37610599 None:intergenic 25.0%
! GTAAAAAAGGCTAAACAAAA+AGG + chr2_2:37610728-37610747 None:intergenic 25.0%
! ATATGAGCAAACAAAAGAAA+TGG - chr2_2:37610916-37610935 Msa0249850:intron 25.0%
! ATTGAGTTATATACTCTTTG+AGG - chr2_2:37610946-37610965 Msa0249850:intron 25.0%
!! TTATATACTCTTTGAGGAAA+TGG - chr2_2:37610952-37610971 Msa0249850:intron 25.0%
! TATCAAGAAAATAGTGAAGT+TGG + chr2_2:37611028-37611047 None:intergenic 25.0%
!! TCTTAAAAGCTTTTCTTTAG+TGG - chr2_2:37611312-37611331 Msa0249850:five_prime_UTR 25.0%
! GAACAAGTAAAATTTACTTG+AGG + chr2_2:37611575-37611594 None:intergenic 25.0%
! CAAAAGGCTCTTATTAATTT+CGG + chr2_2:37611678-37611697 None:intergenic 25.0%
!! GAAACATCTTTATTAGTTTG+TGG + chr2_2:37612033-37612052 None:intergenic 25.0%
! AGGTAATTTGAAGAAATACT+AGG + chr2_2:37612198-37612217 None:intergenic 25.0%
! TCTTCAAATTACCTATCAAA+TGG - chr2_2:37612204-37612223 Msa0249850:intron 25.0%
! TTAAAGATGAAAAGTCTGAA+AGG - chr2_2:37612573-37612592 Msa0249850:intron 25.0%
! TTTCTTGATTGAACTTATAC+AGG - chr2_2:37612832-37612851 Msa0249850:intron 25.0%
! AAGATTTATAATTGCTTGTC+AGG - chr2_2:37612953-37612972 Msa0249850:intron 25.0%
! CTTATCAAAAAAGAAACTAG+TGG - chr2_2:37613050-37613069 Msa0249850:intron 25.0%
! TTATGGCAAATATTTGCAAA+GGG + chr2_2:37613573-37613592 None:intergenic 25.0%
! TTTATGGCAAATATTTGCAA+AGG + chr2_2:37613574-37613593 None:intergenic 25.0%
!! ATTAAATTTTGCTAAACTCC+AGG + chr2_2:37613766-37613785 None:intergenic 25.0%
! ATGATAAATATGCATCTACA+GGG + chr2_2:37613792-37613811 None:intergenic 25.0%
! ATTGCATCACATAATGTAAA+TGG - chr2_2:37613816-37613835 Msa0249850:five_prime_UTR 25.0%
AGTTGTAACACTTGCTTATT+TGG - chr2_2:37604944-37604963 Msa0249850:intron 30.0%
GAGTATATGTTTCGTGAAAT+TGG - chr2_2:37605298-37605317 Msa0249850:CDS 30.0%
TTGAGATGTACTCTAATTTG+AGG - chr2_2:37605324-37605343 Msa0249850:CDS 30.0%
TGAGATGTACTCTAATTTGA+GGG - chr2_2:37605325-37605344 Msa0249850:CDS 30.0%
CCTCTCTAACAAATACATAT+TGG + chr2_2:37605364-37605383 None:intergenic 30.0%
! CCAATATGTATTTGTTAGAG+AGG - chr2_2:37605361-37605380 Msa0249850:CDS 30.0%
AGGCATAATAGGATTAGAAT+TGG - chr2_2:37605563-37605582 Msa0249850:five_prime_UTR 30.0%
AGAATTGGAAATGACAACAT+TGG - chr2_2:37605578-37605597 Msa0249850:five_prime_UTR 30.0%
TTTACATTTGTGTGTAGTGT+GGG - chr2_2:37605908-37605927 Msa0249850:five_prime_UTR 30.0%
! TTTTATATGGTACATGTGGT+AGG - chr2_2:37605996-37606015 Msa0249850:five_prime_UTR 30.0%
TTTATATGGTACATGTGGTA+GGG - chr2_2:37605997-37606016 Msa0249850:five_prime_UTR 30.0%
!! GAGAAACCTCAATTTTAATG+CGG - chr2_2:37606068-37606087 Msa0249850:intron 30.0%
TTCTATTCTCCTGAATTTAG+AGG - chr2_2:37606156-37606175 Msa0249850:five_prime_UTR 30.0%
TCTATTCTCCTGAATTTAGA+GGG - chr2_2:37606157-37606176 Msa0249850:five_prime_UTR 30.0%
! CTGTCTGAGGTATAAATAAT+TGG - chr2_2:37606231-37606250 Msa0249850:five_prime_UTR 30.0%
ACGTATTGTAGAGAAAATAC+AGG - chr2_2:37606307-37606326 Msa0249850:five_prime_UTR 30.0%
TAGAGAATAAACATGCCATT+TGG + chr2_2:37606534-37606553 None:intergenic 30.0%
AAATCATATGCTGATAAGAG+GGG + chr2_2:37606638-37606657 None:intergenic 30.0%
GAAATCATATGCTGATAAGA+GGG + chr2_2:37606639-37606658 None:intergenic 30.0%
TGAAATCATATGCTGATAAG+AGG + chr2_2:37606640-37606659 None:intergenic 30.0%
TTCAAATACTCTAGTATCTC+CGG + chr2_2:37606691-37606710 None:intergenic 30.0%
TGTCACTAAGATTAAAGTTG+TGG - chr2_2:37606815-37606834 Msa0249850:intron 30.0%
!! TTATTTTTCTTGTGCTACGT+TGG - chr2_2:37606913-37606932 Msa0249850:intron 30.0%
! TATTTTTCTTGTGCTACGTT+GGG - chr2_2:37606914-37606933 Msa0249850:intron 30.0%
TCACCAATATCATCATAAGT+TGG - chr2_2:37607325-37607344 Msa0249850:intron 30.0%
ATTATCTCACACTTAAGTGA+AGG + chr2_2:37607473-37607492 None:intergenic 30.0%
AACATTTCTTAAGGGGAAAA+TGG + chr2_2:37607508-37607527 None:intergenic 30.0%
ACTATACTTGAGATTCTTGA+TGG - chr2_2:37607694-37607713 Msa0249850:five_prime_UTR 30.0%
! GTAAGCTCTTTCTTGTTTAA+AGG + chr2_2:37607821-37607840 None:intergenic 30.0%
AGTTCATGAACCTAAACTAA+AGG - chr2_2:37607889-37607908 Msa0249850:intron 30.0%
! TCGAAACAAACCTTTAGTTT+AGG + chr2_2:37607902-37607921 None:intergenic 30.0%
! CTAAAGGTTTGTTTCGATAT+CGG - chr2_2:37607905-37607924 Msa0249850:intron 30.0%
!! AATTTTTGTTTGAGCTTGAC+AGG - chr2_2:37608038-37608057 Msa0249850:intron 30.0%
ATGTTACCAATGATGAAGTA+AGG - chr2_2:37608121-37608140 Msa0249850:intron 30.0%
! TTGGTTCGTTCAAAAATTGT+AGG + chr2_2:37608413-37608432 None:intergenic 30.0%
ATAAGCAAAACAAGTAGCTT+TGG + chr2_2:37608432-37608451 None:intergenic 30.0%
!!! AAAGCTACTTGTTTTGCTTA+TGG - chr2_2:37608431-37608450 Msa0249850:intron 30.0%
AAATAATCTTGTTGAGTGAG+TGG - chr2_2:37608780-37608799 Msa0249850:five_prime_UTR 30.0%
AATAATCTTGTTGAGTGAGT+GGG - chr2_2:37608781-37608800 Msa0249850:five_prime_UTR 30.0%
! CTTAAGGTTTGTTTAGTAGT+TGG - chr2_2:37608914-37608933 Msa0249850:intron 30.0%
! TAAGGTTTGTTTAGTAGTTG+GGG - chr2_2:37608916-37608935 Msa0249850:intron 30.0%
!!! TAATCTTTGTTTTCAGGAAG+TGG - chr2_2:37609151-37609170 Msa0249850:intron 30.0%
ACAATTTATATCTCTGACTC+CGG + chr2_2:37609252-37609271 None:intergenic 30.0%
!! CTTAGCTACTTTGAGATATA+TGG - chr2_2:37609274-37609293 Msa0249850:intron 30.0%
GAATCCTCGATTTATTTAAG+CGG + chr2_2:37609527-37609546 None:intergenic 30.0%
ACTATTTCATGTCTTACTTG+AGG - chr2_2:37609651-37609670 Msa0249850:intron 30.0%
CACAAAAAGCTCAGTTATTA+TGG + chr2_2:37609709-37609728 None:intergenic 30.0%
TAAGTGTTCTTGTCAAGTAT+TGG + chr2_2:37609879-37609898 None:intergenic 30.0%
!! ATTTGAAGTTTTTGACGTTC+AGG - chr2_2:37610233-37610252 Msa0249850:intron 30.0%
ATTAACTTCGTCAACCAATA+TGG + chr2_2:37610803-37610822 None:intergenic 30.0%
CTAAATAAGCTAAAACAGAG+AGG - chr2_2:37610874-37610893 Msa0249850:intron 30.0%
TGAGGAAATGGAAAACTAAA+TGG - chr2_2:37610964-37610983 Msa0249850:intron 30.0%
!! GATGAGAAGATTCTAGAATT+AGG + chr2_2:37611102-37611121 None:intergenic 30.0%
! TCTACTCTCTTTTGTGTAAT+GGG - chr2_2:37611216-37611235 Msa0249850:five_prime_UTR 30.0%
! TGTTTGCTAGTTAGTATTTC+TGG - chr2_2:37611275-37611294 Msa0249850:five_prime_UTR 30.0%
AAGTAAAATTTACTTGAGGG+AGG + chr2_2:37611571-37611590 None:intergenic 30.0%
TTATGTATCTCTTCTACCAT+AGG - chr2_2:37611642-37611661 Msa0249850:intron 30.0%
! CGAAATTAATAAGAGCCTTT+TGG - chr2_2:37611676-37611695 Msa0249850:intron 30.0%
! AGTTTTTGAATTGCCTACAA+AGG + chr2_2:37611789-37611808 None:intergenic 30.0%
GTTAAAAGTCTTTCCAAAAG+TGG - chr2_2:37611973-37611992 Msa0249850:five_prime_UTR 30.0%
!!! TTTTCTAGGATTTCCACTTT+TGG + chr2_2:37611989-37612008 None:intergenic 30.0%
!! TTAGTTTGTGGTACACAATT+GGG + chr2_2:37612021-37612040 None:intergenic 30.0%
!! ATTAGTTTGTGGTACACAAT+TGG + chr2_2:37612022-37612041 None:intergenic 30.0%
!! ATAGTTTTCTCCTTTTCAAG+TGG + chr2_2:37612141-37612160 None:intergenic 30.0%
! GTAAGAGTTAATCTTTTGAC+TGG + chr2_2:37612307-37612326 None:intergenic 30.0%
CTAAGGATGAAAAATCTGAA+AGG - chr2_2:37612385-37612404 Msa0249850:intron 30.0%
! CATTCATCATGTATTGCTTT+TGG - chr2_2:37613108-37613127 Msa0249850:intron 30.0%
!!! ATGTATTGCTTTTGGTTTTC+AGG - chr2_2:37613116-37613135 Msa0249850:intron 30.0%
!! TTTTCAGGAAATGAAACTCT+TGG - chr2_2:37613131-37613150 Msa0249850:intron 30.0%
ACTGATCTTTCATCTTAAGT+TGG - chr2_2:37613487-37613506 Msa0249850:intron 30.0%
! CCTCTCAAACTTCAAATTTT+GGG + chr2_2:37613624-37613643 None:intergenic 30.0%
! CCAAAATTTGAAGTTTGAGA+GGG - chr2_2:37613622-37613641 Msa0249850:five_prime_UTR 30.0%
AATAAATTCCATCAAGAGGA+TGG + chr2_2:37613714-37613733 None:intergenic 30.0%
CATGATAAATATGCATCTAC+AGG + chr2_2:37613793-37613812 None:intergenic 30.0%
! CATAATGTAAATGGAGTGTT+TGG - chr2_2:37613825-37613844 Msa0249850:five_prime_UTR 30.0%
ATATAAAACGGCTATGTCCA+TGG + chr2_2:37604178-37604197 None:intergenic 35.0%
TTTGGAGGGAGAAAATGAAA+TGG + chr2_2:37604302-37604321 None:intergenic 35.0%
! TTTGGTAATATGTACTCCCT+CGG - chr2_2:37604962-37604981 Msa0249850:intron 35.0%
GTTCAATGTATGGTAAGACT+AGG - chr2_2:37605543-37605562 Msa0249850:exon 35.0%
ATGGTAAGACTAGGCATAAT+AGG - chr2_2:37605552-37605571 Msa0249850:five_prime_UTR 35.0%
AGATTGTAGATTATGCAGCA+AGG - chr2_2:37605677-37605696 Msa0249850:five_prime_UTR 35.0%
GTTTACATTTGTGTGTAGTG+TGG - chr2_2:37605907-37605926 Msa0249850:five_prime_UTR 35.0%
CAGATTCCGCATTAAAATTG+AGG + chr2_2:37606077-37606096 None:intergenic 35.0%
!! CTCAATTTTAATGCGGAATC+TGG - chr2_2:37606075-37606094 Msa0249850:intron 35.0%
! TTTTAATGCGGAATCTGGTT+CGG - chr2_2:37606080-37606099 Msa0249850:intron 35.0%
CTATTCTCCTGAATTTAGAG+GGG - chr2_2:37606158-37606177 Msa0249850:five_prime_UTR 35.0%
! ATCATAATGTAGGCTTGGTT+TGG - chr2_2:37606274-37606293 Msa0249850:five_prime_UTR 35.0%
TTACTGCAGGAAATTTAAGC+TGG + chr2_2:37606578-37606597 None:intergenic 35.0%
TCAAATACTCTAGTATCTCC+GGG + chr2_2:37606690-37606709 None:intergenic 35.0%
TGTCGCTAAGATTAAAGTTG+TGG - chr2_2:37607053-37607072 Msa0249850:intron 35.0%
GTTGCATTCACAAACTGAAA+AGG + chr2_2:37607432-37607451 None:intergenic 35.0%
AAGGGGAAAATGGATACAAA+GGG + chr2_2:37607498-37607517 None:intergenic 35.0%
TAAGGGGAAAATGGATACAA+AGG + chr2_2:37607499-37607518 None:intergenic 35.0%
TTCCCCTTAAGAAATGTTGA+TGG - chr2_2:37607510-37607529 Msa0249850:five_prime_UTR 35.0%
AAGAATCTCAAGTATAGTGC+AGG + chr2_2:37607692-37607711 None:intergenic 35.0%
ATTAGCATTCAGGGGATATT+TGG - chr2_2:37607735-37607754 Msa0249850:five_prime_UTR 35.0%
GAATGTTGTAGGTACGTAAA+AGG - chr2_2:37607795-37607814 Msa0249850:five_prime_UTR 35.0%
CAAGAAAGAGCTTACTAAGA+AGG - chr2_2:37607826-37607845 Msa0249850:intron 35.0%
ACAATAGTGAAGTTCGATCT+TGG + chr2_2:37608157-37608176 None:intergenic 35.0%
! TGATTGATCTAAGGCATGAT+TGG - chr2_2:37608344-37608363 Msa0249850:intron 35.0%
! TACATCGTAGCATTTGTTAC+TGG - chr2_2:37608596-37608615 Msa0249850:intron 35.0%
! TCATGTTGTTGAGTTGTTTC+TGG - chr2_2:37608700-37608719 Msa0249850:five_prime_UTR 35.0%
TATTGTGTCTATCTAGACCA+AGG + chr2_2:37608820-37608839 None:intergenic 35.0%
! CTCAGTTTTCATGAAGCTTA+AGG - chr2_2:37608898-37608917 Msa0249850:intron 35.0%
GGAGTCAGAGATATAAATTG+TGG - chr2_2:37609251-37609270 Msa0249850:intron 35.0%
!! AGCTACTTTGAGATATATGG+TGG - chr2_2:37609277-37609296 Msa0249850:intron 35.0%
TTGATCTTCTTAGTGACAGA+AGG - chr2_2:37609308-37609327 Msa0249850:intron 35.0%
AAAGCTCAGTTATTATGGGA+CGG + chr2_2:37609704-37609723 None:intergenic 35.0%
! GTGAAATGGGTCACTTATTT+TGG + chr2_2:37609745-37609764 None:intergenic 35.0%
TAGTGAAGGAGAGAGAAAAA+TGG + chr2_2:37609905-37609924 None:intergenic 35.0%
AGCAAAAGGCTCACTTAAAT+TGG - chr2_2:37609953-37609972 Msa0249850:intron 35.0%
GCAAAAGGCTCACTTAAATT+GGG - chr2_2:37609954-37609973 Msa0249850:intron 35.0%
ATGGAAATGATGCAAGAAGT+GGG - chr2_2:37610406-37610425 Msa0249850:intron 35.0%
CTTAATACTATGTCCCTAGA+AGG + chr2_2:37610659-37610678 None:intergenic 35.0%
CTAGGGACATAGTATTAAGT+TGG - chr2_2:37610660-37610679 Msa0249850:intron 35.0%
CAGGCAATGTTGAGTAAAAA+AGG + chr2_2:37610741-37610760 None:intergenic 35.0%
!!! CTTTTTTACTCAACATTGCC+TGG - chr2_2:37610739-37610758 Msa0249850:intron 35.0%
TCTCATTTCAAAGATAGTCC+AGG + chr2_2:37610760-37610779 None:intergenic 35.0%
GACGAAGTTAATGAAACGTT+CGG - chr2_2:37610811-37610830 Msa0249850:intron 35.0%
!! CAAACAAAAGAAATGGACTG+TGG - chr2_2:37610923-37610942 Msa0249850:intron 35.0%
! TCTAGAATTAGGAAACGAGA+GGG + chr2_2:37611091-37611110 None:intergenic 35.0%
!! TTCTAGAATTAGGAAACGAG+AGG + chr2_2:37611092-37611111 None:intergenic 35.0%
! TTGGTGGATATGGAAAAAGA+GGG + chr2_2:37611161-37611180 None:intergenic 35.0%
! TTTGGTGGATATGGAAAAAG+AGG + chr2_2:37611162-37611181 None:intergenic 35.0%
! ATGAGTGTATTTGGTGGATA+TGG + chr2_2:37611171-37611190 None:intergenic 35.0%
ATATCCACCAAATACACTCA+TGG - chr2_2:37611170-37611189 Msa0249850:intron 35.0%
AAGAGAGTAGAGAAAGTGAT+CGG + chr2_2:37611207-37611226 None:intergenic 35.0%
! CTCTACTCTCTTTTGTGTAA+TGG - chr2_2:37611215-37611234 Msa0249850:five_prime_UTR 35.0%
!!! CTTCGTTGTTTTGAGTTTCT+TGG - chr2_2:37611533-37611552 Msa0249850:intron 35.0%
AAATTTACTTGAGGGAGGAA+TGG + chr2_2:37611566-37611585 None:intergenic 35.0%
ATGATCTCTTGTATATCTCC+AGG - chr2_2:37611812-37611831 Msa0249850:five_prime_UTR 35.0%
CAAGAGAAACCAATGGATAT+GGG - chr2_2:37612108-37612127 Msa0249850:intron 35.0%
TTTCTTCTCGTCCATTTGAT+AGG + chr2_2:37612218-37612237 None:intergenic 35.0%
TCAAATGGACGAGAAGAAAA+AGG - chr2_2:37612219-37612238 Msa0249850:intron 35.0%
! TACAGATGAGAAAGTGCAAA+AGG - chr2_2:37612338-37612357 Msa0249850:intron 35.0%
TCTCATCTGTATCATTTCGT+GGG + chr2_2:37612517-37612536 None:intergenic 35.0%
TTCTCATCTGTATCATTTCG+TGG + chr2_2:37612518-37612537 None:intergenic 35.0%
! TACAGATGAGAAAGTGCAAA+AGG - chr2_2:37612338-37612357 Msa0249850:intron 35.0%
!! TTTAAAACCTTTTCTGCGTG+GGG + chr2_2:37612558-37612577 None:intergenic 35.0%
!!! CTTTAAAACCTTTTCTGCGT+GGG + chr2_2:37612559-37612578 None:intergenic 35.0%
!!! TCTTTAAAACCTTTTCTGCG+TGG + chr2_2:37612560-37612579 None:intergenic 35.0%
GAATATCAATGCAGTACTTG+AGG - chr2_2:37612733-37612752 Msa0249850:intron 35.0%
CTTGATTGAACTTATACAGG+AGG - chr2_2:37612835-37612854 Msa0249850:intron 35.0%
AAGCACATTAAAAGAAGCTG+CGG + chr2_2:37613004-37613023 None:intergenic 35.0%
! AGAAAGCACAAAGCTCAATT+GGG + chr2_2:37613199-37613218 None:intergenic 35.0%
AAACCGAATCTCTTATCAAC+GGG + chr2_2:37613316-37613335 None:intergenic 35.0%
! CCCAAAATTTGAAGTTTGAG+AGG - chr2_2:37613621-37613640 Msa0249850:five_prime_UTR 35.0%
! CCCTCTCAAACTTCAAATTT+TGG + chr2_2:37613625-37613644 None:intergenic 35.0%
GCGCAATTATTCATATTGCA+AGG - chr2_2:37613740-37613759 Msa0249850:five_prime_UTR 35.0%
ATTATTCATATTGCAAGGCC+TGG - chr2_2:37613745-37613764 Msa0249850:five_prime_UTR 35.0%
TCGAATCAGTAACCAGAGAA+TGG + chr2_2:37604356-37604375 None:intergenic 40.0%
! ATCTGAAAACGATGGCGTTT+TGG + chr2_2:37604402-37604421 None:intergenic 40.0%
CGATTCAGATCTGAAAACGA+TGG + chr2_2:37604410-37604429 None:intergenic 40.0%
CAAATCTCGAGTTCCTGATT+CGG - chr2_2:37604430-37604449 Msa0249850:three_prime_UTR 40.0%
AAGTGAGAAGAAACCGAATC+AGG + chr2_2:37604446-37604465 None:intergenic 40.0%
AGAACCTAAATGCTGCAAAC+CGG + chr2_2:37604784-37604803 None:intergenic 40.0%
ATACCTGCATGAGAAGGTTA+GGG + chr2_2:37604842-37604861 None:intergenic 40.0%
! TGCTTATAATTTGGGACCGA+GGG + chr2_2:37604981-37605000 None:intergenic 40.0%
! TTGCTTATAATTTGGGACCG+AGG + chr2_2:37604982-37605001 None:intergenic 40.0%
TTGCTTATAATATGGGACGG+AGG - chr2_2:37605275-37605294 Msa0249850:CDS 40.0%
TGCTTATAATATGGGACGGA+GGG - chr2_2:37605276-37605295 Msa0249850:CDS 40.0%
! GTATTTGTTAGAGAGGGTCT+CGG - chr2_2:37605368-37605387 Msa0249850:CDS 40.0%
! TATTTGTTAGAGAGGGTCTC+GGG - chr2_2:37605369-37605388 Msa0249850:CDS 40.0%
TAAGACCCGTGATGTTGTAT+GGG - chr2_2:37605455-37605474 Msa0249850:CDS 40.0%
ATTGTCCCATACAACATCAC+GGG + chr2_2:37605463-37605482 None:intergenic 40.0%
CATTGTCCCATACAACATCA+CGG + chr2_2:37605464-37605483 None:intergenic 40.0%
GATGTTGTATGGGACAATGT+TGG - chr2_2:37605465-37605484 Msa0249850:CDS 40.0%
TTGTATGGGACAATGTTGGA+CGG - chr2_2:37605469-37605488 Msa0249850:CDS 40.0%
! AAATAAGCATAGCGGAGATG+AGG - chr2_2:37605513-37605532 Msa0249850:CDS 40.0%
AGGATGTTGCGTTCAATGTA+TGG - chr2_2:37605533-37605552 Msa0249850:exon 40.0%
ACAACATTGGAGAGAGAGTT+GGG - chr2_2:37605591-37605610 Msa0249850:five_prime_UTR 40.0%
! AGCACCTTTTGCTGAAAAGA+TGG - chr2_2:37605616-37605635 Msa0249850:five_prime_UTR 40.0%
! ACCTTTTGCTGAAAAGATGG+TGG - chr2_2:37605619-37605638 Msa0249850:five_prime_UTR 40.0%
! TCCACCATCTTTTCAGCAAA+AGG + chr2_2:37605623-37605642 None:intergenic 40.0%
! AAGCCTTATCCCACTAAATG+GGG + chr2_2:37605859-37605878 None:intergenic 40.0%
! CAAGCCTTATCCCACTAAAT+GGG + chr2_2:37605860-37605879 None:intergenic 40.0%
TGTTGTCGTCGTCATTATAG+AGG - chr2_2:37605885-37605904 Msa0249850:five_prime_UTR 40.0%
TACGCCCAATACTCAAACTT+TGG - chr2_2:37606110-37606129 Msa0249850:intron 40.0%
ACGCCCAATACTCAAACTTT+GGG - chr2_2:37606111-37606130 Msa0249850:intron 40.0%
CCAAAATCCCCTCTAAATTC+AGG + chr2_2:37606168-37606187 None:intergenic 40.0%
! CCTGAATTTAGAGGGGATTT+TGG - chr2_2:37606165-37606184 Msa0249850:five_prime_UTR 40.0%
GTTCGCAATGATGAACAACT+AGG - chr2_2:37606423-37606442 Msa0249850:intron 40.0%
AGCTGGATGCAGGATTATAA+GGG + chr2_2:37606561-37606580 None:intergenic 40.0%
AAGCTGGATGCAGGATTATA+AGG + chr2_2:37606562-37606581 None:intergenic 40.0%
AGGAAATTTAAGCTGGATGC+AGG + chr2_2:37606571-37606590 None:intergenic 40.0%
!!! CACATACTGACTTTTACTGC+AGG + chr2_2:37606591-37606610 None:intergenic 40.0%
GAACAATCATCCATCATACC+CGG - chr2_2:37606669-37606688 Msa0249850:intron 40.0%
GTATATGGAAGTCCCAACAT+AGG + chr2_2:37607168-37607187 None:intergenic 40.0%
GATGATAGCAGTAGTAGTTG+TGG + chr2_2:37607278-37607297 None:intergenic 40.0%
TGAAACTCTTCTGCTAGGAA+GGG + chr2_2:37607308-37607327 None:intergenic 40.0%
ATTGGTGAAACTCTTCTGCT+AGG + chr2_2:37607313-37607332 None:intergenic 40.0%
CGCCATCAACATTTCTTAAG+GGG + chr2_2:37607515-37607534 None:intergenic 40.0%
GCGCCATCAACATTTCTTAA+GGG + chr2_2:37607516-37607535 None:intergenic 40.0%
AGCGCCATCAACATTTCTTA+AGG + chr2_2:37607517-37607536 None:intergenic 40.0%
GAAAGAGCTTACTAAGAAGG+AGG - chr2_2:37607829-37607848 Msa0249850:intron 40.0%
!! GGTTGATTTGACAGCTTATG+TGG - chr2_2:37608059-37608078 Msa0249850:intron 40.0%
GGTAACATGCTCATCAAGAA+CGG + chr2_2:37608109-37608128 None:intergenic 40.0%
GAGATGCCTTACTTCATCAT+TGG + chr2_2:37608130-37608149 None:intergenic 40.0%
! TAATTGGCTCAACTGTAGCT+CGG + chr2_2:37608388-37608407 None:intergenic 40.0%
! TGTTTTGCTTATGGTCAGAC+AGG - chr2_2:37608440-37608459 Msa0249850:intron 40.0%
GTTTGTTTAGTAGTTGGGGT+GGG - chr2_2:37608920-37608939 Msa0249850:intron 40.0%
AGTTAAGCAGTGGAGTGATA+AGG - chr2_2:37608945-37608964 Msa0249850:intron 40.0%
! TTAGTATTTTGTTGGGGGTG+GGG + chr2_2:37608990-37609009 None:intergenic 40.0%
! GTTAGTATTTTGTTGGGGGT+GGG + chr2_2:37608991-37609010 None:intergenic 40.0%
! AGTTAGTATTTTGTTGGGGG+TGG + chr2_2:37608992-37609011 None:intergenic 40.0%
GCACAGCAATGGAATATGAA+CGG + chr2_2:37609081-37609100 None:intergenic 40.0%
ATCTTCTTAGTGACAGAAGG+CGG - chr2_2:37609311-37609330 Msa0249850:intron 40.0%
CATAGGCACATAATGGCTTA+AGG + chr2_2:37609432-37609451 None:intergenic 40.0%
CTTAAGCCATTATGTGCCTA+TGG - chr2_2:37609430-37609449 Msa0249850:intron 40.0%
!!! AACATTTTTTGTCTTCCGCG+AGG - chr2_2:37609495-37609514 Msa0249850:intron 40.0%
TCAGCCGCTTAAATAAATCG+AGG - chr2_2:37609520-37609539 Msa0249850:intron 40.0%
! GGAGGGAGTATGTATTTAAG+CGG + chr2_2:37609683-37609702 None:intergenic 40.0%
AAGGCTCACTTAAATTGGGA+CGG - chr2_2:37609958-37609977 Msa0249850:intron 40.0%
TTGCTTACTCAATGTCTCGT+TGG - chr2_2:37610124-37610143 Msa0249850:five_prime_UTR 40.0%
TGAACAGGAAACTTTGCATG+AGG - chr2_2:37610169-37610188 Msa0249850:five_prime_UTR 40.0%
GAACAGGAAACTTTGCATGA+GGG - chr2_2:37610170-37610189 Msa0249850:five_prime_UTR 40.0%
AAACTTTGCATGAGGGAAGA+TGG - chr2_2:37610177-37610196 Msa0249850:five_prime_UTR 40.0%
! GGAAATGCTTCAAGAAGTAC+AGG - chr2_2:37610279-37610298 Msa0249850:intron 40.0%
! TTCAAGAAGTACAGGATCCA+CGG - chr2_2:37610287-37610306 Msa0249850:intron 40.0%
! GGTTGTAAAGAAGCACAATG+AGG - chr2_2:37610353-37610372 Msa0249850:intron 40.0%
AAGCACAATGAGGTGAAAGA+GGG - chr2_2:37610363-37610382 Msa0249850:intron 40.0%
AAGCGAAACTCAAACACTGA+TGG - chr2_2:37610387-37610406 Msa0249850:intron 40.0%
GATGGAAATGATGCAAGAAG+TGG - chr2_2:37610405-37610424 Msa0249850:intron 40.0%
AAATGATGCAAGAAGTGGGA+AGG - chr2_2:37610410-37610429 Msa0249850:intron 40.0%
ACGATCATTATCGGTAGTGT+CGG + chr2_2:37610484-37610503 None:intergenic 40.0%
CCGTGTTTGACGATCATTAT+CGG + chr2_2:37610493-37610512 None:intergenic 40.0%
CCGATAATGATCGTCAAACA+CGG - chr2_2:37610490-37610509 Msa0249850:intron 40.0%
!! CTGACTTTTCTAGCCTTCTA+GGG - chr2_2:37610643-37610662 Msa0249850:intron 40.0%
! AATTTTGTTCCCTCCACTCT+AGG + chr2_2:37610838-37610857 None:intergenic 40.0%
AGAGTGGAGGGAACAAAATT+AGG - chr2_2:37610838-37610857 Msa0249850:intron 40.0%
TCATAGAAAACCCTTTCGTG+AGG - chr2_2:37610994-37611013 Msa0249850:intron 40.0%
CAAGGCTGAATATAAGAGGA+GGG + chr2_2:37611067-37611086 None:intergenic 40.0%
TCAAGGCTGAATATAAGAGG+AGG + chr2_2:37611068-37611087 None:intergenic 40.0%
CAGAGTCGAACAAGTCAATT+AGG + chr2_2:37611257-37611276 None:intergenic 40.0%
CTCTTCTACCATAGGATTGA+AGG - chr2_2:37611650-37611669 Msa0249850:intron 40.0%
!!! TAAGAGCCTTTTGGCTTTGA+AGG - chr2_2:37611685-37611704 Msa0249850:intron 40.0%
TGCATTCCTTCAAAGCCAAA+AGG + chr2_2:37611694-37611713 None:intergenic 40.0%
ACCAGATCCATATTCCATTC+CGG - chr2_2:37611732-37611751 Msa0249850:intron 40.0%
ATACCGATCAGCATATCGTA+GGG + chr2_2:37611867-37611886 None:intergenic 40.0%
TCTAGCATCTGTTCTTTCAC+AGG - chr2_2:37611904-37611923 Msa0249850:five_prime_UTR 40.0%
CTAGCATCTGTTCTTTCACA+GGG - chr2_2:37611905-37611924 Msa0249850:five_prime_UTR 40.0%
TGCTTCATCTTAACGTGAAC+AGG - chr2_2:37611950-37611969 Msa0249850:five_prime_UTR 40.0%
GCTTCATCTTAACGTGAACA+GGG - chr2_2:37611951-37611970 Msa0249850:five_prime_UTR 40.0%
!! TTGGGTATTGCGTCTTTTCT+AGG + chr2_2:37612003-37612022 None:intergenic 40.0%
!! CCATATCCATTGGTTTCTCT+TGG + chr2_2:37612110-37612129 None:intergenic 40.0%
CCAAGAGAAACCAATGGATA+TGG - chr2_2:37612107-37612126 Msa0249850:intron 40.0%
AGGCATCACTTATCCTTCAA+TGG - chr2_2:37612239-37612258 Msa0249850:intron 40.0%
TCACTTATCCTTCAATGGAG+AGG - chr2_2:37612244-37612263 Msa0249850:intron 40.0%
CACTTATCCTTCAATGGAGA+GGG - chr2_2:37612245-37612264 Msa0249850:intron 40.0%
AGGGATACCGTTGAAGAAAA+AGG - chr2_2:37612426-37612445 Msa0249850:intron 40.0%
! CGTCAAGCCTTTTTCTTCAA+CGG + chr2_2:37612436-37612455 None:intergenic 40.0%
! TTAAAACCTTTTCTGCGTGG+GGG + chr2_2:37612557-37612576 None:intergenic 40.0%
GCCTGCAAACTTGATGAAAA+GGG - chr2_2:37612595-37612614 Msa0249850:intron 40.0%
! TCCCTTTTCATCAAGTTTGC+AGG + chr2_2:37612599-37612618 None:intergenic 40.0%
AACAGTGTTGTGATTCGATG+TGG + chr2_2:37612669-37612688 None:intergenic 40.0%
AATCACAACACTGTTACCTC+TGG - chr2_2:37612674-37612693 Msa0249850:intron 40.0%
ATTGATATTCACGTCAGGTG+CGG + chr2_2:37612723-37612742 None:intergenic 40.0%
! ACTGCATTGATATTCACGTC+AGG + chr2_2:37612728-37612747 None:intergenic 40.0%
CTCGATTTCTTTCCTATGAG+CGG + chr2_2:37612876-37612895 None:intergenic 40.0%
GGGCTACATAGTTGTCAATA+CGG + chr2_2:37613179-37613198 None:intergenic 40.0%
! GAGAAAGCACAAAGCTCAAT+TGG + chr2_2:37613200-37613219 None:intergenic 40.0%
! CCTGTTCTTTTAGTCGATGT+TGG + chr2_2:37613269-37613288 None:intergenic 40.0%
! CCAACATCGACTAAAAGAAC+AGG - chr2_2:37613266-37613285 Msa0249850:five_prime_UTR 40.0%
! TTCCCCGTTGATAAGAGATT+CGG - chr2_2:37613310-37613329 Msa0249850:five_prime_UTR 40.0%
AACCGAATCTCTTATCAACG+GGG + chr2_2:37613315-37613334 None:intergenic 40.0%
!!! TGTGTCATTTTAGCCATCTC+AGG - chr2_2:37613547-37613566 Msa0249850:five_prime_UTR 40.0%
ATTCCATCAAGAGGATGGAT+AGG + chr2_2:37613709-37613728 None:intergenic 40.0%
AACCAGAGAATGGCGTTTGT+TGG + chr2_2:37604346-37604365 None:intergenic 45.0%
ATCAGTGGATGCACTTTGCA+GGG + chr2_2:37604724-37604743 None:intergenic 45.0%
GATACCTGCATGAGAAGGTT+AGG + chr2_2:37604843-37604862 None:intergenic 45.0%
GTAAGACCCGTGATGTTGTA+TGG - chr2_2:37605454-37605473 Msa0249850:CDS 45.0%
GACAACATTGGAGAGAGAGT+TGG - chr2_2:37605590-37605609 Msa0249850:five_prime_UTR 45.0%
CAACATTGGAGAGAGAGTTG+GGG - chr2_2:37605592-37605611 Msa0249850:five_prime_UTR 45.0%
!! AGATGGTGGAAACTCACCTT+AGG - chr2_2:37605633-37605652 Msa0249850:five_prime_UTR 45.0%
CTACATGCTGAAACCACCTA+AGG + chr2_2:37605652-37605671 None:intergenic 45.0%
TAGCCAAATCACTAGGGGTA+GGG - chr2_2:37605720-37605739 Msa0249850:five_prime_UTR 45.0%
CTTATCCCACTAAATGGGGT+CGG + chr2_2:37605855-37605874 None:intergenic 45.0%
! CCAAGCCTTATCCCACTAAA+TGG + chr2_2:37605861-37605880 None:intergenic 45.0%
CCATTTAGTGGGATAAGGCT+TGG - chr2_2:37605858-37605877 Msa0249850:five_prime_UTR 45.0%
TGGTACATGTGGTAGGGTTA+TGG - chr2_2:37606003-37606022 Msa0249850:five_prime_UTR 45.0%
CCGCCCAAAGTTTGAGTATT+GGG + chr2_2:37606117-37606136 None:intergenic 45.0%
CCCAATACTCAAACTTTGGG+CGG - chr2_2:37606114-37606133 Msa0249850:intron 45.0%
TCCGCCCAAAGTTTGAGTAT+TGG + chr2_2:37606118-37606137 None:intergenic 45.0%
AATACTCAAACTTTGGGCGG+AGG - chr2_2:37606117-37606136 Msa0249850:intron 45.0%
ATACTCAAACTTTGGGCGGA+GGG - chr2_2:37606118-37606137 Msa0249850:intron 45.0%
!!! TTTAGAGGGGATTTTGGAGC+CGG - chr2_2:37606171-37606190 Msa0249850:five_prime_UTR 45.0%
! GCTTTTGGATCTTCATGCCA+TGG - chr2_2:37606194-37606213 Msa0249850:five_prime_UTR 45.0%
CCAATATTGCGCGTAATTGC+TGG + chr2_2:37606457-37606476 None:intergenic 45.0%
CCAGCAATTACGCGCAATAT+TGG - chr2_2:37606454-37606473 Msa0249850:intron 45.0%
TCTAGTATCTCCGGGTATGA+TGG + chr2_2:37606682-37606701 None:intergenic 45.0%
GTGAAACTCTTCTGCTAGGA+AGG + chr2_2:37607309-37607328 None:intergenic 45.0%
!! GTTGTTGAGTTGTTTCTGGC+TGG - chr2_2:37608704-37608723 Msa0249850:five_prime_UTR 45.0%
CTGGCTGGTATGTGTGATAT+AGG - chr2_2:37608719-37608738 Msa0249850:five_prime_UTR 45.0%
AATCTTGTTGAGTGAGTGGG+AGG - chr2_2:37608784-37608803 Msa0249850:five_prime_UTR 45.0%
TTGAGTGAGTGGGAGGATAT+TGG - chr2_2:37608791-37608810 Msa0249850:five_prime_UTR 45.0%
! GGTTTGTTTAGTAGTTGGGG+TGG - chr2_2:37608919-37608938 Msa0249850:intron 45.0%
TAAGCAGTGGAGTGATAAGG+AGG - chr2_2:37608948-37608967 Msa0249850:intron 45.0%
AAGCAGTGGAGTGATAAGGA+GGG - chr2_2:37608949-37608968 Msa0249850:intron 45.0%
AGTGATGAAGTGGCTTTCTG+AGG + chr2_2:37609109-37609128 None:intergenic 45.0%
AGTTGCATCAGCCAGTTTAC+CGG - chr2_2:37609230-37609249 Msa0249850:intron 45.0%
TATCTCTGACTCCGGTAAAC+TGG + chr2_2:37609244-37609263 None:intergenic 45.0%
TCTTCTTAGTGACAGAAGGC+GGG - chr2_2:37609312-37609331 Msa0249850:intron 45.0%
CTCAGACCATAGGCACATAA+TGG + chr2_2:37609439-37609458 None:intergenic 45.0%
CTCAGTTATTATGGGACGGA+GGG + chr2_2:37609700-37609719 None:intergenic 45.0%
CTCACTTAAATTGGGACGGA+GGG - chr2_2:37609962-37609981 Msa0249850:intron 45.0%
! CTCAATGTCTCGTTGGTGAA+TGG - chr2_2:37610131-37610150 Msa0249850:five_prime_UTR 45.0%
! AATGTCTCGTTGGTGAATGG+TGG - chr2_2:37610134-37610153 Msa0249850:five_prime_UTR 45.0%
TTTGCATGAGGGAAGATGGA+CGG - chr2_2:37610181-37610200 Msa0249850:five_prime_UTR 45.0%
! TCAAGAAGTACAGGATCCAC+GGG - chr2_2:37610288-37610307 Msa0249850:intron 45.0%
GTCGCATGCTATCTTACAGT+TGG - chr2_2:37610332-37610351 Msa0249850:intron 45.0%
GAAGCACAATGAGGTGAAAG+AGG - chr2_2:37610362-37610381 Msa0249850:intron 45.0%
GATCTTGCTGGAAGTGAAAG+AGG - chr2_2:37610456-37610475 Msa0249850:intron 45.0%
!! GCTGACTTTTCTAGCCTTCT+AGG - chr2_2:37610642-37610661 Msa0249850:intron 45.0%
GGTTCTTGTTCCTCACGAAA+GGG + chr2_2:37611007-37611026 None:intergenic 45.0%
TGGTTCTTGTTCCTCACGAA+AGG + chr2_2:37611008-37611027 None:intergenic 45.0%
GGGTCAAGGCTGAATATAAG+AGG + chr2_2:37611071-37611090 None:intergenic 45.0%
ATTAGGAAACGAGAGGGTCA+AGG + chr2_2:37611085-37611104 None:intergenic 45.0%
GAGTAGAGAAAGTGATCGGT+GGG + chr2_2:37611203-37611222 None:intergenic 45.0%
AGAGTAGAGAAAGTGATCGG+TGG + chr2_2:37611204-37611223 None:intergenic 45.0%
TTACTTGAGGGAGGAATGGT+AGG + chr2_2:37611562-37611581 None:intergenic 45.0%
TTTCGGCTCCTTCAATCCTA+TGG + chr2_2:37611661-37611680 None:intergenic 45.0%
CCAGATCCATATTCCATTCC+GGG - chr2_2:37611733-37611752 Msa0249850:intron 45.0%
CAGATCCATATTCCATTCCG+GGG - chr2_2:37611734-37611753 Msa0249850:intron 45.0%
! CTTCTGTAAGTTTGCTTCCC+CGG + chr2_2:37611754-37611773 None:intergenic 45.0%
!! GCAAACTTACAGAAGTGCTG+CGG - chr2_2:37611759-37611778 Msa0249850:intron 45.0%
!! CAAACTTACAGAAGTGCTGC+GGG - chr2_2:37611760-37611779 Msa0249850:intron 45.0%
TCTTGTATATCTCCAGGTGC+CGG - chr2_2:37611818-37611837 Msa0249850:five_prime_UTR 45.0%
ACACCCTACGATATGCTGAT+CGG - chr2_2:37611861-37611880 Msa0249850:five_prime_UTR 45.0%
CATACCGATCAGCATATCGT+AGG + chr2_2:37611868-37611887 None:intergenic 45.0%
AGAAACCAATGGATATGGGC+AGG - chr2_2:37612112-37612131 Msa0249850:intron 45.0%
! TTAGAACCTTTTCTGCGTGG+GGG + chr2_2:37612369-37612388 None:intergenic 45.0%
! CTTAGAACCTTTTCTGCGTG+GGG + chr2_2:37612370-37612389 None:intergenic 45.0%
! CCTTAGAACCTTTTCTGCGT+GGG + chr2_2:37612371-37612390 None:intergenic 45.0%
! TCCTTAGAACCTTTTCTGCG+TGG + chr2_2:37612372-37612391 None:intergenic 45.0%
AATCTGAAAGGCCTGCAAAC+TGG - chr2_2:37612397-37612416 Msa0249850:intron 45.0%
GCCTGCAAACTGGATGAAAA+GGG - chr2_2:37612407-37612426 Msa0249850:intron 45.0%
! TCCCTTTTCATCCAGTTTGC+AGG + chr2_2:37612411-37612430 None:intergenic 45.0%
CGTGGGTAAGAGTTCATCTT+TGG + chr2_2:37612500-37612519 None:intergenic 45.0%
GGCCTGCAAACTTGATGAAA+AGG - chr2_2:37612594-37612613 Msa0249850:intron 45.0%
AAGCACTAATTGCCGCTCAT+AGG - chr2_2:37612861-37612880 Msa0249850:intron 45.0%
CGCTCATAGGAAAGAAATCG+AGG - chr2_2:37612874-37612893 Msa0249850:intron 45.0%
GAAAGAAATCGAGGACACGA+TGG - chr2_2:37612883-37612902 Msa0249850:intron 45.0%
TAGTTGTCAATACGGCTACC+TGG + chr2_2:37613171-37613190 None:intergenic 45.0%
GTCGATGTTGGAATCTTGCA+AGG + chr2_2:37613257-37613276 None:intergenic 45.0%
TATTTGCAAAGGGCCTGAGA+TGG + chr2_2:37613563-37613582 None:intergenic 45.0%
TCTCCTATCCATCCTCTTGA+TGG - chr2_2:37613703-37613722 Msa0249850:five_prime_UTR 45.0%
!! TTTATTATTGTATAATTATT+TGG - chr2_2:37604904-37604923 Msa0249850:intron 5.0%
GAGAGAGAGAGAGGTTTGGA+GGG + chr2_2:37604316-37604335 None:intergenic 50.0%
AGAGAGAGAGAGAGGTTTGG+AGG + chr2_2:37604317-37604336 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGGTT+TGG + chr2_2:37604320-37604339 None:intergenic 50.0%
CTCCAACAAACGCCATTCTC+TGG - chr2_2:37604341-37604360 Msa0249850:three_prime_UTR 50.0%
TTGATCGTAAACAGCGGCAG+CGG + chr2_2:37604688-37604707 None:intergenic 50.0%
!! GGCAGGTTGATCGTAAACAG+CGG + chr2_2:37604694-37604713 None:intergenic 50.0%
GCTGTTTACGATCAACCTGC+CGG - chr2_2:37604693-37604712 Msa0249850:exon 50.0%
CATCAGTGGATGCACTTTGC+AGG + chr2_2:37604725-37604744 None:intergenic 50.0%
TGATGCCAGTGATGCTGTCA+TGG - chr2_2:37604740-37604759 Msa0249850:CDS 50.0%
ACCTAAATGCTGCAAACCGG+CGG + chr2_2:37604781-37604800 None:intergenic 50.0%
GAAGAGACGATGATCGACAC+CGG + chr2_2:37604820-37604839 None:intergenic 50.0%
CTTCCCTAACCTTCTCATGC+AGG - chr2_2:37604836-37604855 Msa0249850:CDS 50.0%
TGGTGGAAACTCACCTTAGG+TGG - chr2_2:37605636-37605655 Msa0249850:five_prime_UTR 50.0%
AGCAAGGAGAGTAGACCAGA+TGG - chr2_2:37605693-37605712 Msa0249850:five_prime_UTR 50.0%
AAGGAGAGTAGACCAGATGG+AGG - chr2_2:37605696-37605715 Msa0249850:five_prime_UTR 50.0%
AGGAGAGTAGACCAGATGGA+GGG - chr2_2:37605697-37605716 Msa0249850:five_prime_UTR 50.0%
! TGATTTGGCTACCCTCCATC+TGG + chr2_2:37605711-37605730 None:intergenic 50.0%
TGGAGGGTAGCCAAATCACT+AGG - chr2_2:37605713-37605732 Msa0249850:five_prime_UTR 50.0%
GGAGGGTAGCCAAATCACTA+GGG - chr2_2:37605714-37605733 Msa0249850:five_prime_UTR 50.0%
GAGGGTAGCCAAATCACTAG+GGG - chr2_2:37605715-37605734 Msa0249850:five_prime_UTR 50.0%
GTAGCCAAATCACTAGGGGT+AGG - chr2_2:37605719-37605738 Msa0249850:five_prime_UTR 50.0%
CTTCCCTACCCCTAGTGATT+TGG + chr2_2:37605726-37605745 None:intergenic 50.0%
ACTAAATGGGGTCGGCTACA+TGG + chr2_2:37605847-37605866 None:intergenic 50.0%
ATGTAGCCGACCCCATTTAG+TGG - chr2_2:37605846-37605865 Msa0249850:five_prime_UTR 50.0%
TGTAGCCGACCCCATTTAGT+GGG - chr2_2:37605847-37605866 Msa0249850:five_prime_UTR 50.0%
CGACCCCATTTAGTGGGATA+AGG - chr2_2:37605853-37605872 Msa0249850:five_prime_UTR 50.0%
AGTCTGCTGAAGAGAAGCAG+AGG - chr2_2:37606031-37606050 Msa0249850:intron 50.0%
!!! TTAGAGGGGATTTTGGAGCC+GGG - chr2_2:37606172-37606191 Msa0249850:five_prime_UTR 50.0%
GGCATGAAGATCCAAAAGCC+CGG + chr2_2:37606193-37606212 None:intergenic 50.0%
CAGAAGCTCTGTGTCATCCA+TGG + chr2_2:37606214-37606233 None:intergenic 50.0%
TGACACAGAGCTTCTGTCTG+AGG - chr2_2:37606218-37606237 Msa0249850:five_prime_UTR 50.0%
! TGGGAGGATATTGGTTGCCT+TGG - chr2_2:37608800-37608819 Msa0249850:five_prime_UTR 50.0%
AGTGATAAGGAGGGAGGAGA+GGG - chr2_2:37608958-37608977 Msa0249850:intron 50.0%
CTGAGGATCAAGCACAGCAA+TGG + chr2_2:37609092-37609111 None:intergenic 50.0%
!! TCTGCAGCTCTGAGTGGTAA+AGG + chr2_2:37609196-37609215 None:intergenic 50.0%
GCTGATGCAACTGTCGAACA+AGG + chr2_2:37609222-37609241 None:intergenic 50.0%
! ACGCAAAGCACTCAGACCAT+AGG + chr2_2:37609449-37609468 None:intergenic 50.0%
AGTGCTTTGCGTGTGGATCT+GGG - chr2_2:37609457-37609476 Msa0249850:intron 50.0%
TTTAAGCGGCTGAATCCTCG+CGG + chr2_2:37609513-37609532 None:intergenic 50.0%
GCTCAGTTATTATGGGACGG+AGG + chr2_2:37609701-37609720 None:intergenic 50.0%
GCTCACTTAAATTGGGACGG+AGG - chr2_2:37609961-37609980 Msa0249850:intron 50.0%
CGGCAGCAAGTTTGCATTGT+AGG - chr2_2:37610201-37610220 Msa0249850:intron 50.0%
TAAGATAGCATGCGACCTGG+AGG + chr2_2:37610328-37610347 None:intergenic 50.0%
CTGTAAGATAGCATGCGACC+TGG + chr2_2:37610331-37610350 None:intergenic 50.0%
GCATGGAACAGTCATGCAGT+TGG + chr2_2:37610563-37610582 None:intergenic 50.0%
TGAAACGTTCGGACCTAGAG+TGG - chr2_2:37610822-37610841 Msa0249850:intron 50.0%
TCCACTCACTCTCTGACATG+TGG - chr2_2:37611120-37611139 Msa0249850:intron 50.0%
ACCACATGTCAGAGAGTGAG+TGG + chr2_2:37611124-37611143 None:intergenic 50.0%
GGAGCCATGAGTGTATTTGG+TGG + chr2_2:37611177-37611196 None:intergenic 50.0%
TGGGGAGCCATGAGTGTATT+TGG + chr2_2:37611180-37611199 None:intergenic 50.0%
AGAGAAAGTGATCGGTGGGT+GGG + chr2_2:37611199-37611218 None:intergenic 50.0%
TAGAGAAAGTGATCGGTGGG+TGG + chr2_2:37611200-37611219 None:intergenic 50.0%
CCCGGAATGGAATATGGATC+TGG + chr2_2:37611736-37611755 None:intergenic 50.0%
TGCTTCCCCGGAATGGAATA+TGG + chr2_2:37611742-37611761 None:intergenic 50.0%
! GTAAGTTTGCTTCCCCGGAA+TGG + chr2_2:37611749-37611768 None:intergenic 50.0%
CTTGTATATCTCCAGGTGCC+GGG - chr2_2:37611819-37611838 Msa0249850:five_prime_UTR 50.0%
AAGCGTGTGTTCACAAGACC+CGG + chr2_2:37611840-37611859 None:intergenic 50.0%
TCAACCCTTCCAGCTAGTGT+TGG - chr2_2:37612060-37612079 Msa0249850:intron 50.0%
TGCACCAACACTAGCTGGAA+GGG + chr2_2:37612067-37612086 None:intergenic 50.0%
TCAGCGCCAAGAGAAACCAA+TGG - chr2_2:37612101-37612120 Msa0249850:intron 50.0%
ATCCTTCAATGGAGAGGGAG+AGG - chr2_2:37612250-37612269 Msa0249850:intron 50.0%
AACCTCTCCCTCTCCATTGA+AGG + chr2_2:37612255-37612274 None:intergenic 50.0%
CCCACGCAGAAAAGGTTCTA+AGG - chr2_2:37612368-37612387 Msa0249850:intron 50.0%
GGCCTGCAAACTGGATGAAA+AGG - chr2_2:37612406-37612425 Msa0249850:intron 50.0%
! GGTCGAGAGATCAGAAGCAT+TGG + chr2_2:37612624-37612643 None:intergenic 50.0%
ACACTGTTACCTCTGGATCC+AGG - chr2_2:37612681-37612700 Msa0249850:intron 50.0%
GTCATAAAGCCTGGATCCAG+AGG + chr2_2:37612693-37612712 None:intergenic 50.0%
GCGGCACAAAAACTCAAGTC+AGG + chr2_2:37612985-37613004 None:intergenic 50.0%
! GCTACCTGGTTGGTCAACTT+CGG + chr2_2:37613157-37613176 None:intergenic 50.0%
TGTCAATACGGCTACCTGGT+TGG + chr2_2:37613167-37613186 None:intergenic 50.0%
!! TCGCAAAGCAGCTAGTCTTG+TGG - chr2_2:37613218-37613237 Msa0249850:five_prime_UTR 50.0%
!! CGCAAAGCAGCTAGTCTTGT+GGG - chr2_2:37613219-37613238 Msa0249850:five_prime_UTR 50.0%
GGAGAGAGAGAGAGAGAGAG+AGG + chr2_2:37604325-37604344 None:intergenic 55.0%
AGTGGATGCACTTTGCAGGG+AGG + chr2_2:37604721-37604740 None:intergenic 55.0%
GACAGCATCACTGGCATCAG+TGG + chr2_2:37604739-37604758 None:intergenic 55.0%
!! TCCGCCGGTTTGCAGCATTT+AGG - chr2_2:37604777-37604796 Msa0249850:CDS 55.0%
GGTTCTCCGCTTGCTTCATC+CGG - chr2_2:37604798-37604817 Msa0249850:CDS 55.0%
TCGACACCGGATGAAGCAAG+CGG + chr2_2:37604807-37604826 None:intergenic 55.0%
GCGACGATACCTGCATGAGA+AGG + chr2_2:37604848-37604867 None:intergenic 55.0%
!!! GGATTTTGGAGCCGGGCTTT+TGG - chr2_2:37606179-37606198 Msa0249850:five_prime_UTR 55.0%
CAGTGGAGTGATAAGGAGGG+AGG - chr2_2:37608952-37608971 Msa0249850:intron 55.0%
GAGTGATAAGGAGGGAGGAG+AGG - chr2_2:37608957-37608976 Msa0249850:intron 55.0%
!! AGGTCTTCTGCAGCTCTGAG+TGG + chr2_2:37609202-37609221 None:intergenic 55.0%
TGGTCTGAGTGCTTTGCGTG+TGG - chr2_2:37609450-37609469 Msa0249850:intron 55.0%
GAGTGCTTTGCGTGTGGATC+TGG - chr2_2:37609456-37609475 Msa0249850:intron 55.0%
TGCAAGAAGTGGGAAGGTCG+TGG - chr2_2:37610416-37610435 Msa0249850:intron 55.0%
GCAAGAAGTGGGAAGGTCGT+GGG - chr2_2:37610417-37610436 Msa0249850:intron 55.0%
CAAGAAGTGGGAAGGTCGTG+GGG - chr2_2:37610418-37610437 Msa0249850:intron 55.0%
AACGTTCGGACCTAGAGTGG+AGG - chr2_2:37610825-37610844 Msa0249850:intron 55.0%
ACGTTCGGACCTAGAGTGGA+GGG - chr2_2:37610826-37610845 Msa0249850:intron 55.0%
GAGGAGGGCGAGTAACAGAA+AGG + chr2_2:37611052-37611071 None:intergenic 55.0%
GAGAAAGTGATCGGTGGGTG+GGG + chr2_2:37611198-37611217 None:intergenic 55.0%
CTGCACCAACACTAGCTGGA+AGG + chr2_2:37612068-37612087 None:intergenic 55.0%
!! TCCAGCTAGTGTTGGTGCAG+AGG - chr2_2:37612068-37612087 Msa0249850:intron 55.0%
TCCTCTGCACCAACACTAGC+TGG + chr2_2:37612072-37612091 None:intergenic 55.0%
GGCTTCCTGCCCATATCCAT+TGG + chr2_2:37612120-37612139 None:intergenic 55.0%
GGGCAGGAAGCCACTTGAAA+AGG - chr2_2:37612128-37612147 Msa0249850:intron 55.0%
GTATCTCCCCCACGCAGAAA+AGG - chr2_2:37612360-37612379 Msa0249850:intron 55.0%
GTTTCTCCCCCACGCAGAAA+AGG - chr2_2:37612548-37612567 Msa0249850:intron 55.0%
ATCTCTCGACCACAAGCTCC+AGG - chr2_2:37612633-37612652 Msa0249850:intron 55.0%
! TTGCTGTTGCCTGGAGCTTG+TGG + chr2_2:37612645-37612664 None:intergenic 55.0%
!! CGATGTGGTTTGCTGTTGCC+TGG + chr2_2:37612654-37612673 None:intergenic 55.0%
GGACTCTGCGTCATAAAGCC+TGG + chr2_2:37612702-37612721 None:intergenic 55.0%
TTGGCCGAAGTTGACCAACC+AGG - chr2_2:37613150-37613169 Msa0249850:intron 55.0%
CATTACCCTGTGGCGGCATC+TGG + chr2_2:37604665-37604684 None:intergenic 60.0%
CCAGTGATGCTGTCATGGCG+CGG - chr2_2:37604745-37604764 Msa0249850:CDS 60.0%
GCGGAGGGTCTGCATCAGAT+GGG - chr2_2:37606133-37606152 Msa0249850:intron 60.0%
GGGGTGGGAGAGTTAAGCAG+TGG - chr2_2:37608935-37608954 Msa0249850:intron 60.0%
AGGATCCACGGGTGCTAACG+AGG - chr2_2:37610299-37610318 Msa0249850:intron 60.0%
GTGCTAACGAGGAGTCCTCC+AGG - chr2_2:37610310-37610329 Msa0249850:intron 60.0%
GTGCTGCGGGACTCCTTTGT+AGG - chr2_2:37611773-37611792 Msa0249850:intron 60.0%
TGTTCACAAGACCCGGCACC+TGG + chr2_2:37611833-37611852 None:intergenic 60.0%
! TGGCGCTGGGAACGTCGTTG+AGG + chr2_2:37604630-37604649 None:intergenic 65.0%
GCAGCGGCATTACCCTGTGG+CGG + chr2_2:37604672-37604691 None:intergenic 65.0%
! TGCACTTTGCAGGGAGGCGC+CGG + chr2_2:37604715-37604734 None:intergenic 65.0%
CCGCGCCATGACAGCATCAC+TGG + chr2_2:37604748-37604767 None:intergenic 65.0%
GTGATGCTGTCATGGCGCGG+TGG - chr2_2:37604748-37604767 Msa0249850:CDS 65.0%
GGCGGAGGGTCTGCATCAGA+TGG - chr2_2:37606132-37606151 Msa0249850:intron 65.0%
GGACTCCTCGTTAGCACCCG+TGG + chr2_2:37610307-37610326 None:intergenic 65.0%
ACGACGTTCCCAGCGCCACG+TGG - chr2_2:37604632-37604651 Msa0249850:intron 70.0%
ACGTTCCCAGCGCCACGTGG+TGG - chr2_2:37604635-37604654 Msa0249850:intron 70.0%
GCATCTGGCCAGCCACCACG+TGG + chr2_2:37604650-37604669 None:intergenic 70.0%
GCTGGCCAGATGCCGCCACA+GGG - chr2_2:37604657-37604676 Msa0249850:intron 70.0%
GCGGCAGCGGCATTACCCTG+TGG + chr2_2:37604675-37604694 None:intergenic 70.0%
TCCCAGCGCCACGTGGTGGC+TGG - chr2_2:37604639-37604658 Msa0249850:intron 75.0%
GCCAGCCACCACGTGGCGCT+GGG + chr2_2:37604643-37604662 None:intergenic 75.0%
! GGCTGGCCAGATGCCGCCAC+AGG - chr2_2:37604656-37604675 Msa0249850:intron 75.0%
!! CTTTGCAGGGAGGCGCCGGC+AGG + chr2_2:37604711-37604730 None:intergenic 75.0%
GCGCGGTGGCTTCAGTCCGC+CGG - chr2_2:37604762-37604781 Msa0249850:CDS 75.0%
! GGCCAGCCACCACGTGGCGC+TGG + chr2_2:37604644-37604663 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 37604170 37613848 37604170 ID=Msa0249850;Name=Msa0249850
chr2_2 mRNA 37604170 37613848 37604170 ID=Msa0249850-mRNA-1;Parent=Msa0249850;Name=Msa0249850-mRNA-1;_AED=0.13;_eAED=0.13;_QI=2462|1|1|1|0.76|0.5|14|428|178
chr2_2 exon 37604170 37604582 37604170 ID=Msa0249850-mRNA-1:exon:11899;Parent=Msa0249850-mRNA-1
chr2_2 exon 37604683 37604880 37604683 ID=Msa0249850-mRNA-1:exon:11898;Parent=Msa0249850-mRNA-1
chr2_2 exon 37605099 37605164 37605099 ID=Msa0249850-mRNA-1:exon:11897;Parent=Msa0249850-mRNA-1
chr2_2 exon 37605264 37606046 37605264 ID=Msa0249850-mRNA-1:exon:11896;Parent=Msa0249850-mRNA-1
chr2_2 exon 37606136 37606354 37606136 ID=Msa0249850-mRNA-1:exon:11895;Parent=Msa0249850-mRNA-1
chr2_2 exon 37607507 37607842 37607507 ID=Msa0249850-mRNA-1:exon:11894;Parent=Msa0249850-mRNA-1
chr2_2 exon 37608689 37608851 37608689 ID=Msa0249850-mRNA-1:exon:11893;Parent=Msa0249850-mRNA-1
chr2_2 exon 37609557 37609638 37609557 ID=Msa0249850-mRNA-1:exon:11892;Parent=Msa0249850-mRNA-1
chr2_2 exon 37609881 37609958 37609881 ID=Msa0249850-mRNA-1:exon:11891;Parent=Msa0249850-mRNA-1
chr2_2 exon 37610108 37610212 37610108 ID=Msa0249850-mRNA-1:exon:11890;Parent=Msa0249850-mRNA-1
chr2_2 exon 37611182 37611370 37611182 ID=Msa0249850-mRNA-1:exon:11889;Parent=Msa0249850-mRNA-1
chr2_2 exon 37611779 37612000 37611779 ID=Msa0249850-mRNA-1:exon:11888;Parent=Msa0249850-mRNA-1
chr2_2 exon 37613161 37613424 37613161 ID=Msa0249850-mRNA-1:exon:11887;Parent=Msa0249850-mRNA-1
chr2_2 exon 37613540 37613848 37613540 ID=Msa0249850-mRNA-1:exon:11886;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37613540 37613848 37613540 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37613161 37613424 37613161 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37611779 37612000 37611779 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37611182 37611370 37611182 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37610108 37610212 37610108 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37609881 37609958 37609881 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37609557 37609638 37609557 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37608689 37608851 37608689 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37607507 37607842 37607507 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37606136 37606354 37606136 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 five_prime_UTR 37605552 37606046 37605552 ID=Msa0249850-mRNA-1:five_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 CDS 37605264 37605551 37605264 ID=Msa0249850-mRNA-1:cds;Parent=Msa0249850-mRNA-1
chr2_2 CDS 37605099 37605164 37605099 ID=Msa0249850-mRNA-1:cds;Parent=Msa0249850-mRNA-1
chr2_2 CDS 37604698 37604880 37604698 ID=Msa0249850-mRNA-1:cds;Parent=Msa0249850-mRNA-1
chr2_2 three_prime_UTR 37604683 37604697 37604683 ID=Msa0249850-mRNA-1:three_prime_utr;Parent=Msa0249850-mRNA-1
chr2_2 three_prime_UTR 37604170 37604582 37604170 ID=Msa0249850-mRNA-1:three_prime_utr;Parent=Msa0249850-mRNA-1
Gene Sequence

>Msa0249850

ATGAAGAACTCTTATAATGATTCTTCGAGTCCAAAGATGAACTCTTACCCACGAAATGATACAGATGAGAAAGTGCAAAAGGTTTCTCCCCCACGCAGAAAAGGTTTTAAAGATGAAAAGTCTGAAAGGCCTGCAAACTTGATGAAAAGGGATACCAATGCTTCTGATCTCTCGACCACAAGCTCCAGGCAACAGCAAACCACATCGAATCACAACACTGTTACCTCTGGATCCAGGCTTTATGACGCAGAGTCCGCACCTGACGTGAATATCAATGCAGTACTTGAGGAGGAAGAAGCACTAATTGCCGCTCATAGGAAAGAAATCGAGGACACGATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTTGACCAACCAGGTAGCCGTATTGACAACTATGTAGCCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTTGTGGGTCTTCAAGCTCGCCTTGCAAGATTCCAACATCGACTAAAAGAACAGGAAATTCTGAGTAGAAAAAGAGTTCCCCGTTGA
Protein sequence

>Msa0249850

MKNSYNDSSSPKMNSYPRNDTDEKVQKVSPPRRKGFKDEKSERPANLMKRDTNASDLSTTSSRQQQTTSNHNTVTSGSRLYDAESAPDVNINAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSRIDNYVAQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPR*