Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436470 | XP_013470478.1 | 98.418 | 316 | 5 | 0 | 1 | 316 | 19 | 334 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436470 | sp|O80624|MAKR4_ARATH | 48.265 | 317 | 106 | 13 | 1 | 308 | 18 | 285 | 1.40e-54 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436470 | A0A072VS60 | 98.418 | 316 | 5 | 0 | 1 | 316 | 19 | 334 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045620 | Msa1436470 | 0.800404 | 1.464445e-48 | -8.615850e-47 |
| Msa1371800 | Msa1436470 | 0.800013 | 1.758833e-48 | -8.615850e-47 |
| Msa1372030 | Msa1436470 | 0.814235 | 1.708045e-51 | -8.615850e-47 |
| Msa1409710 | Msa1436470 | 0.976440 | 7.892532e-142 | -8.615850e-47 |
| Msa0751720 | Msa1436470 | 0.806096 | 9.708242e-50 | -8.615850e-47 |
| Msa1278030 | Msa1436470 | 0.808695 | 2.728837e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436470 | MtrunA17_Chr1g0212991 | 98.418 | 316 | 5 | 0 | 1 | 316 | 19 | 334 | 0.0 | 644 |
| Msa1436470 | MtrunA17_Chr1g0182011 | 42.593 | 324 | 133 | 13 | 1 | 313 | 22 | 303 | 1.94e-41 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1436470 | AT2G39370.1 | 48.265 | 317 | 106 | 13 | 1 | 308 | 18 | 285 | 1.42e-55 | 183 |
| Msa1436470 | AT2G37380.1 | 37.333 | 300 | 124 | 11 | 19 | 311 | 50 | 292 | 4.32e-20 | 89.4 |
Find 54 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTTGAAGCCTTTAATT+TGG | 0.146793 | tig0027943:+15381 | None:intergenic |
| GTTGGAATCAAACTTCTTTC+AGG | 0.146827 | tig0027943:-15112 | Msa1436470:CDS |
| GATAGCTTTGCCTTTGAATT+TGG | 0.163953 | tig0027943:+15215 | None:intergenic |
| TTCTTTAGGTTCCAAATTAA+AGG | 0.205767 | tig0027943:-15392 | Msa1436470:CDS |
| AAACTGAAACAGTCTTCTTT+AGG | 0.271143 | tig0027943:-15406 | Msa1436470:CDS |
| TCTTAGTCCATGACTTCTTC+TGG | 0.278627 | tig0027943:+15428 | None:intergenic |
| CTTGAACAATGGAAGACATT+TGG | 0.293756 | tig0027943:+15776 | None:intergenic |
| TGCCTTTGAATTTGGCCATA+TGG | 0.329386 | tig0027943:+15223 | None:intergenic |
| AAGTCCTGGTTTGGAAAATC+TGG | 0.332844 | tig0027943:-15352 | Msa1436470:CDS |
| TCACTTTCAAACAAATCATA+TGG | 0.358419 | tig0027943:-15043 | Msa1436470:CDS |
| TCATCAAATTCCTCGATATC+TGG | 0.379426 | tig0027943:-15079 | Msa1436470:CDS |
| ATCAGATGGTGAAATATTGC+AGG | 0.390323 | tig0027943:+15540 | None:intergenic |
| GCATATCTCAAGTCCTGGTT+TGG | 0.399275 | tig0027943:-15361 | Msa1436470:CDS |
| TGCAGTGTGCAATTGCTCCT+TGG | 0.412534 | tig0027943:+14954 | None:intergenic |
| TCAACAAAAGTTGCTGATGA+AGG | 0.445650 | tig0027943:-15304 | Msa1436470:CDS |
| TCATCAGCTGGTGAAGTTGT+TGG | 0.457440 | tig0027943:+15745 | None:intergenic |
| AAAGAAAAGAGCAGTGAAGA+TGG | 0.463735 | tig0027943:-15163 | Msa1436470:CDS |
| AAGGCAAAGCTATCAGTCTT+CGG | 0.466088 | tig0027943:-15206 | Msa1436470:CDS |
| GTAAAAGTAGTAGTGGCTAA+TGG | 0.470831 | tig0027943:+15592 | None:intergenic |
| CCTTCCACCTCGGTTACAAA+TGG | 0.472089 | tig0027943:-15689 | Msa1436470:CDS |
| CACAGAAGATCATTCTCTGT+TGG | 0.492725 | tig0027943:-15130 | Msa1436470:CDS |
| AAACTCACCAGCTTCTCAAA+AGG | 0.497441 | tig0027943:-15012 | Msa1436470:CDS |
| AAGGTTCAGTTTCAAAAGCA+AGG | 0.506978 | tig0027943:-15285 | Msa1436470:CDS |
| TGGCTCTTTCTCTTGAACAA+TGG | 0.508604 | tig0027943:+15765 | None:intergenic |
| TCAAATGGTGTGCCGGTGGT+CGG | 0.509798 | tig0027943:+15565 | None:intergenic |
| ATCCATATGGCCAAATTCAA+AGG | 0.520385 | tig0027943:-15225 | Msa1436470:CDS |
| CAACCTCAAAAGGTTTGTGA+GGG | 0.520895 | tig0027943:+15647 | None:intergenic |
| TAACCGAGGTGGAAGGTGAA+GGG | 0.527822 | tig0027943:+15696 | None:intergenic |
| GTAACCGAGGTGGAAGGTGA+AGG | 0.531115 | tig0027943:+15695 | None:intergenic |
| TCAAACTCTCTAGGATGTTG+TGG | 0.534718 | tig0027943:+15802 | None:intergenic |
| CAAGAGCATATCTCAAGTCC+TGG | 0.537010 | tig0027943:-15366 | Msa1436470:CDS |
| GAAATATTGCAGGACTCAAA+TGG | 0.540473 | tig0027943:+15550 | None:intergenic |
| ATTTGGAACTCAAACTCTCT+AGG | 0.552249 | tig0027943:+15793 | None:intergenic |
| TCAACCTCAAAAGGTTTGTG+AGG | 0.554753 | tig0027943:+15646 | None:intergenic |
| TTGAAAACCAGAAGAAGTCA+TGG | 0.561084 | tig0027943:-15435 | Msa1436470:CDS |
| GAGATAGAAAACTCAATCCA+AGG | 0.565645 | tig0027943:-14971 | Msa1436470:CDS |
| TTGTAGAAAAGCTCATCAGC+TGG | 0.575859 | tig0027943:+15733 | None:intergenic |
| AGGTTCAGTTTCAAAAGCAA+GGG | 0.584246 | tig0027943:-15284 | Msa1436470:CDS |
| GTCGAGGTTATAATACTCCT+CGG | 0.586101 | tig0027943:+15489 | None:intergenic |
| AACCGAGGTGGAAGGTGAAG+GGG | 0.586622 | tig0027943:+15697 | None:intergenic |
| CGGCGTTGTAAAAGTAGTAG+TGG | 0.587994 | tig0027943:+15585 | None:intergenic |
| GCAGGACTCAAATGGTGTGC+CGG | 0.600198 | tig0027943:+15558 | None:intergenic |
| ACCGAGGTGGAAGGTGAAGG+GGG | 0.612840 | tig0027943:+15698 | None:intergenic |
| TATCCGTTGTGTGGTAGTCG+AGG | 0.615070 | tig0027943:+15473 | None:intergenic |
| TCTTCGGTTTCTGTCATGAG+AGG | 0.620110 | tig0027943:-15190 | Msa1436470:CDS |
| TACCACACAACGGATACAAG+TGG | 0.625294 | tig0027943:-15466 | Msa1436470:CDS |
| ATCCACTTGTATCCGTTGTG+TGG | 0.626565 | tig0027943:+15464 | None:intergenic |
| CTAACTTGACAAGAATCAGA+TGG | 0.628578 | tig0027943:+15526 | None:intergenic |
| TGACGATGAACCAGATATCG+AGG | 0.629004 | tig0027943:+15069 | None:intergenic |
| GGACTCAAATGGTGTGCCGG+TGG | 0.637216 | tig0027943:+15561 | None:intergenic |
| CCATTTGTAACCGAGGTGGA+AGG | 0.639907 | tig0027943:+15689 | None:intergenic |
| TAGTCGAGAACTAAATGCCG+AGG | 0.663489 | tig0027943:-15506 | Msa1436470:CDS |
| TCGACCATTTGTAACCGAGG+TGG | 0.669165 | tig0027943:+15685 | None:intergenic |
| TAACCTCGACTACCACACAA+CGG | 0.724478 | tig0027943:-15476 | Msa1436470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAATAAGCATGTTCA+AGG | - | tig0027943:15525-15544 | Msa1436470:CDS | 20.0% |
| !!! | ATTTTAAATAAGCATGTTCA+AGG | - | tig0027943:15525-15544 | Msa1436470:CDS | 20.0% |
| !! | TTCTTTAGGTTCCAAATTAA+AGG | - | tig0027943:15392-15411 | Msa1436470:CDS | 25.0% |
| ! | TCACTTTCAAACAAATCATA+TGG | - | tig0027943:15741-15760 | Msa1436470:CDS | 25.0% |
| !! | TTCTTTAGGTTCCAAATTAA+AGG | - | tig0027943:15392-15411 | Msa1436470:CDS | 25.0% |
| ! | TCACTTTCAAACAAATCATA+TGG | - | tig0027943:15741-15760 | Msa1436470:CDS | 25.0% |
| ! | ATATCCTTTTCAACCTCAAA+AGG | + | tig0027943:15150-15169 | None:intergenic | 30.0% |
| AAACTGAAACAGTCTTCTTT+AGG | - | tig0027943:15378-15397 | Msa1436470:CDS | 30.0% | |
| GGAGCAAATAAAAATCCATA+TGG | - | tig0027943:15546-15565 | Msa1436470:CDS | 30.0% | |
| ! | ATATCCTTTTCAACCTCAAA+AGG | + | tig0027943:15150-15169 | None:intergenic | 30.0% |
| AAACTGAAACAGTCTTCTTT+AGG | - | tig0027943:15378-15397 | Msa1436470:CDS | 30.0% | |
| GGAGCAAATAAAAATCCATA+TGG | - | tig0027943:15546-15565 | Msa1436470:CDS | 30.0% | |
| ! | ATTTGGAACTCAAACTCTCT+AGG | + | tig0027943:14994-15013 | None:intergenic | 35.0% |
| CTTGAACAATGGAAGACATT+TGG | + | tig0027943:15011-15030 | None:intergenic | 35.0% | |
| !!! | CAAACCTTTTGAGGTTGAAA+AGG | - | tig0027943:15143-15162 | Msa1436470:CDS | 35.0% |
| GTAAAAGTAGTAGTGGCTAA+TGG | + | tig0027943:15195-15214 | None:intergenic | 35.0% | |
| GAAATATTGCAGGACTCAAA+TGG | + | tig0027943:15237-15256 | None:intergenic | 35.0% | |
| ATCAGATGGTGAAATATTGC+AGG | + | tig0027943:15247-15266 | None:intergenic | 35.0% | |
| CTAACTTGACAAGAATCAGA+TGG | + | tig0027943:15261-15280 | None:intergenic | 35.0% | |
| TTGAAAACCAGAAGAAGTCA+TGG | - | tig0027943:15349-15368 | Msa1436470:CDS | 35.0% | |
| TGCTCTTGAAGCCTTTAATT+TGG | + | tig0027943:15406-15425 | None:intergenic | 35.0% | |
| TCAACAAAAGTTGCTGATGA+AGG | - | tig0027943:15480-15499 | Msa1436470:CDS | 35.0% | |
| AAGGTTCAGTTTCAAAAGCA+AGG | - | tig0027943:15499-15518 | Msa1436470:CDS | 35.0% | |
| AGGTTCAGTTTCAAAAGCAA+GGG | - | tig0027943:15500-15519 | Msa1436470:CDS | 35.0% | |
| ATCCATATGGCCAAATTCAA+AGG | - | tig0027943:15559-15578 | Msa1436470:CDS | 35.0% | |
| ! | GATAGCTTTGCCTTTGAATT+TGG | + | tig0027943:15572-15591 | None:intergenic | 35.0% |
| AAAGAAAAGAGCAGTGAAGA+TGG | - | tig0027943:15621-15640 | Msa1436470:CDS | 35.0% | |
| GTTGGAATCAAACTTCTTTC+AGG | - | tig0027943:15672-15691 | Msa1436470:CDS | 35.0% | |
| TCATCAAATTCCTCGATATC+TGG | - | tig0027943:15705-15724 | Msa1436470:CDS | 35.0% | |
| GAGATAGAAAACTCAATCCA+AGG | - | tig0027943:15813-15832 | Msa1436470:CDS | 35.0% | |
| ! | ATTTGGAACTCAAACTCTCT+AGG | + | tig0027943:14994-15013 | None:intergenic | 35.0% |
| CTTGAACAATGGAAGACATT+TGG | + | tig0027943:15011-15030 | None:intergenic | 35.0% | |
| !!! | CAAACCTTTTGAGGTTGAAA+AGG | - | tig0027943:15143-15162 | Msa1436470:CDS | 35.0% |
| GTAAAAGTAGTAGTGGCTAA+TGG | + | tig0027943:15195-15214 | None:intergenic | 35.0% | |
| GAAATATTGCAGGACTCAAA+TGG | + | tig0027943:15237-15256 | None:intergenic | 35.0% | |
| ATCAGATGGTGAAATATTGC+AGG | + | tig0027943:15247-15266 | None:intergenic | 35.0% | |
| CTAACTTGACAAGAATCAGA+TGG | + | tig0027943:15261-15280 | None:intergenic | 35.0% | |
| TTGAAAACCAGAAGAAGTCA+TGG | - | tig0027943:15349-15368 | Msa1436470:CDS | 35.0% | |
| TGCTCTTGAAGCCTTTAATT+TGG | + | tig0027943:15406-15425 | None:intergenic | 35.0% | |
| TCAACAAAAGTTGCTGATGA+AGG | - | tig0027943:15480-15499 | Msa1436470:CDS | 35.0% | |
| AAGGTTCAGTTTCAAAAGCA+AGG | - | tig0027943:15499-15518 | Msa1436470:CDS | 35.0% | |
| AGGTTCAGTTTCAAAAGCAA+GGG | - | tig0027943:15500-15519 | Msa1436470:CDS | 35.0% | |
| ATCCATATGGCCAAATTCAA+AGG | - | tig0027943:15559-15578 | Msa1436470:CDS | 35.0% | |
| ! | GATAGCTTTGCCTTTGAATT+TGG | + | tig0027943:15572-15591 | None:intergenic | 35.0% |
| AAAGAAAAGAGCAGTGAAGA+TGG | - | tig0027943:15621-15640 | Msa1436470:CDS | 35.0% | |
| GTTGGAATCAAACTTCTTTC+AGG | - | tig0027943:15672-15691 | Msa1436470:CDS | 35.0% | |
| TCATCAAATTCCTCGATATC+TGG | - | tig0027943:15705-15724 | Msa1436470:CDS | 35.0% | |
| GAGATAGAAAACTCAATCCA+AGG | - | tig0027943:15813-15832 | Msa1436470:CDS | 35.0% | |
| !! | TCAAACTCTCTAGGATGTTG+TGG | + | tig0027943:14985-15004 | None:intergenic | 40.0% |
| TGGCTCTTTCTCTTGAACAA+TGG | + | tig0027943:15022-15041 | None:intergenic | 40.0% | |
| TTGTAGAAAAGCTCATCAGC+TGG | + | tig0027943:15054-15073 | None:intergenic | 40.0% | |
| ! | GCTGATGAGCTTTTCTACAA+AGG | - | tig0027943:15054-15073 | Msa1436470:CDS | 40.0% |
| ! | TTTTCGACCATTTGTAACCG+AGG | + | tig0027943:15105-15124 | None:intergenic | 40.0% |
| !! | AAGGTTTGTGAGGGTTTTGA+AGG | + | tig0027943:15131-15150 | None:intergenic | 40.0% |
| ! | AAACCCTCACAAACCTTTTG+AGG | - | tig0027943:15134-15153 | Msa1436470:CDS | 40.0% |
| CAACCTCAAAAGGTTTGTGA+GGG | + | tig0027943:15140-15159 | None:intergenic | 40.0% | |
| TCAACCTCAAAAGGTTTGTG+AGG | + | tig0027943:15141-15160 | None:intergenic | 40.0% | |
| GTCGAGGTTATAATACTCCT+CGG | + | tig0027943:15298-15317 | None:intergenic | 40.0% | |
| TCTTAGTCCATGACTTCTTC+TGG | + | tig0027943:15359-15378 | None:intergenic | 40.0% | |
| !! | AAGTCCTGGTTTGGAAAATC+TGG | - | tig0027943:15432-15451 | Msa1436470:CDS | 40.0% |
| ! | ACAACCAGATTTTCCAAACC+AGG | + | tig0027943:15439-15458 | None:intergenic | 40.0% |
| TGCCTTTGAATTTGGCCATA+TGG | + | tig0027943:15564-15583 | None:intergenic | 40.0% | |
| AAGGCAAAGCTATCAGTCTT+CGG | - | tig0027943:15578-15597 | Msa1436470:CDS | 40.0% | |
| CACAGAAGATCATTCTCTGT+TGG | - | tig0027943:15654-15673 | Msa1436470:CDS | 40.0% | |
| AAACTCACCAGCTTCTCAAA+AGG | - | tig0027943:15772-15791 | Msa1436470:CDS | 40.0% | |
| !! | TCAAACTCTCTAGGATGTTG+TGG | + | tig0027943:14985-15004 | None:intergenic | 40.0% |
| TGGCTCTTTCTCTTGAACAA+TGG | + | tig0027943:15022-15041 | None:intergenic | 40.0% | |
| TTGTAGAAAAGCTCATCAGC+TGG | + | tig0027943:15054-15073 | None:intergenic | 40.0% | |
| ! | GCTGATGAGCTTTTCTACAA+AGG | - | tig0027943:15054-15073 | Msa1436470:CDS | 40.0% |
| ! | TTTTCGACCATTTGTAACCG+AGG | + | tig0027943:15105-15124 | None:intergenic | 40.0% |
| !! | AAGGTTTGTGAGGGTTTTGA+AGG | + | tig0027943:15131-15150 | None:intergenic | 40.0% |
| ! | AAACCCTCACAAACCTTTTG+AGG | - | tig0027943:15134-15153 | Msa1436470:CDS | 40.0% |
| CAACCTCAAAAGGTTTGTGA+GGG | + | tig0027943:15140-15159 | None:intergenic | 40.0% | |
| TCAACCTCAAAAGGTTTGTG+AGG | + | tig0027943:15141-15160 | None:intergenic | 40.0% | |
| GTCGAGGTTATAATACTCCT+CGG | + | tig0027943:15298-15317 | None:intergenic | 40.0% | |
| TCTTAGTCCATGACTTCTTC+TGG | + | tig0027943:15359-15378 | None:intergenic | 40.0% | |
| !! | AAGTCCTGGTTTGGAAAATC+TGG | - | tig0027943:15432-15451 | Msa1436470:CDS | 40.0% |
| ! | ACAACCAGATTTTCCAAACC+AGG | + | tig0027943:15439-15458 | None:intergenic | 40.0% |
| TGCCTTTGAATTTGGCCATA+TGG | + | tig0027943:15564-15583 | None:intergenic | 40.0% | |
| AAGGCAAAGCTATCAGTCTT+CGG | - | tig0027943:15578-15597 | Msa1436470:CDS | 40.0% | |
| CACAGAAGATCATTCTCTGT+TGG | - | tig0027943:15654-15673 | Msa1436470:CDS | 40.0% | |
| AAACTCACCAGCTTCTCAAA+AGG | - | tig0027943:15772-15791 | Msa1436470:CDS | 40.0% | |
| TCATCAGCTGGTGAAGTTGT+TGG | + | tig0027943:15042-15061 | None:intergenic | 45.0% | |
| CGGCGTTGTAAAAGTAGTAG+TGG | + | tig0027943:15202-15221 | None:intergenic | 45.0% | |
| TAGTCGAGAACTAAATGCCG+AGG | - | tig0027943:15278-15297 | Msa1436470:CDS | 45.0% | |
| TAACCTCGACTACCACACAA+CGG | - | tig0027943:15308-15327 | Msa1436470:CDS | 45.0% | |
| TACCACACAACGGATACAAG+TGG | - | tig0027943:15318-15337 | Msa1436470:CDS | 45.0% | |
| ATCCACTTGTATCCGTTGTG+TGG | + | tig0027943:15323-15342 | None:intergenic | 45.0% | |
| ! | CAAGAGCATATCTCAAGTCC+TGG | - | tig0027943:15418-15437 | Msa1436470:CDS | 45.0% |
| GCATATCTCAAGTCCTGGTT+TGG | - | tig0027943:15423-15442 | Msa1436470:CDS | 45.0% | |
| TCTTCGGTTTCTGTCATGAG+AGG | - | tig0027943:15594-15613 | Msa1436470:CDS | 45.0% | |
| TGACGATGAACCAGATATCG+AGG | + | tig0027943:15718-15737 | None:intergenic | 45.0% | |
| !! | TGTTGCACCTTTTGAGAAGC+TGG | + | tig0027943:15782-15801 | None:intergenic | 45.0% |
| TCATCAGCTGGTGAAGTTGT+TGG | + | tig0027943:15042-15061 | None:intergenic | 45.0% | |
| CGGCGTTGTAAAAGTAGTAG+TGG | + | tig0027943:15202-15221 | None:intergenic | 45.0% | |
| TAGTCGAGAACTAAATGCCG+AGG | - | tig0027943:15278-15297 | Msa1436470:CDS | 45.0% | |
| TAACCTCGACTACCACACAA+CGG | - | tig0027943:15308-15327 | Msa1436470:CDS | 45.0% | |
| TACCACACAACGGATACAAG+TGG | - | tig0027943:15318-15337 | Msa1436470:CDS | 45.0% | |
| ATCCACTTGTATCCGTTGTG+TGG | + | tig0027943:15323-15342 | None:intergenic | 45.0% | |
| ! | CAAGAGCATATCTCAAGTCC+TGG | - | tig0027943:15418-15437 | Msa1436470:CDS | 45.0% |
| GCATATCTCAAGTCCTGGTT+TGG | - | tig0027943:15423-15442 | Msa1436470:CDS | 45.0% | |
| TCTTCGGTTTCTGTCATGAG+AGG | - | tig0027943:15594-15613 | Msa1436470:CDS | 45.0% | |
| TGACGATGAACCAGATATCG+AGG | + | tig0027943:15718-15737 | None:intergenic | 45.0% | |
| !! | TGTTGCACCTTTTGAGAAGC+TGG | + | tig0027943:15782-15801 | None:intergenic | 45.0% |
| TAACCGAGGTGGAAGGTGAA+GGG | + | tig0027943:15091-15110 | None:intergenic | 50.0% | |
| CCATTTGTAACCGAGGTGGA+AGG | + | tig0027943:15098-15117 | None:intergenic | 50.0% | |
| CCTTCCACCTCGGTTACAAA+TGG | - | tig0027943:15095-15114 | Msa1436470:CDS | 50.0% | |
| TCGACCATTTGTAACCGAGG+TGG | + | tig0027943:15102-15121 | None:intergenic | 50.0% | |
| ! | ACTTTTACAACGCCGACCAC+CGG | - | tig0027943:15207-15226 | Msa1436470:CDS | 50.0% |
| TATCCGTTGTGTGGTAGTCG+AGG | + | tig0027943:15314-15333 | None:intergenic | 50.0% | |
| TGCAGTGTGCAATTGCTCCT+TGG | + | tig0027943:15833-15852 | None:intergenic | 50.0% | |
| TAACCGAGGTGGAAGGTGAA+GGG | + | tig0027943:15091-15110 | None:intergenic | 50.0% | |
| CCATTTGTAACCGAGGTGGA+AGG | + | tig0027943:15098-15117 | None:intergenic | 50.0% | |
| CCTTCCACCTCGGTTACAAA+TGG | - | tig0027943:15095-15114 | Msa1436470:CDS | 50.0% | |
| TCGACCATTTGTAACCGAGG+TGG | + | tig0027943:15102-15121 | None:intergenic | 50.0% | |
| ! | ACTTTTACAACGCCGACCAC+CGG | - | tig0027943:15207-15226 | Msa1436470:CDS | 50.0% |
| TATCCGTTGTGTGGTAGTCG+AGG | + | tig0027943:15314-15333 | None:intergenic | 50.0% | |
| TGCAGTGTGCAATTGCTCCT+TGG | + | tig0027943:15833-15852 | None:intergenic | 50.0% | |
| AACCGAGGTGGAAGGTGAAG+GGG | + | tig0027943:15090-15109 | None:intergenic | 55.0% | |
| GTAACCGAGGTGGAAGGTGA+AGG | + | tig0027943:15092-15111 | None:intergenic | 55.0% | |
| ! | TCAAATGGTGTGCCGGTGGT+CGG | + | tig0027943:15222-15241 | None:intergenic | 55.0% |
| GCAGGACTCAAATGGTGTGC+CGG | + | tig0027943:15229-15248 | None:intergenic | 55.0% | |
| AACCGAGGTGGAAGGTGAAG+GGG | + | tig0027943:15090-15109 | None:intergenic | 55.0% | |
| GTAACCGAGGTGGAAGGTGA+AGG | + | tig0027943:15092-15111 | None:intergenic | 55.0% | |
| ! | TCAAATGGTGTGCCGGTGGT+CGG | + | tig0027943:15222-15241 | None:intergenic | 55.0% |
| GCAGGACTCAAATGGTGTGC+CGG | + | tig0027943:15229-15248 | None:intergenic | 55.0% | |
| TCCCCCTTCACCTTCCACCT+CGG | - | tig0027943:15085-15104 | Msa1436470:CDS | 60.0% | |
| ACCGAGGTGGAAGGTGAAGG+GGG | + | tig0027943:15089-15108 | None:intergenic | 60.0% | |
| GGACTCAAATGGTGTGCCGG+TGG | + | tig0027943:15226-15245 | None:intergenic | 60.0% | |
| TCCCCCTTCACCTTCCACCT+CGG | - | tig0027943:15085-15104 | Msa1436470:CDS | 60.0% | |
| ACCGAGGTGGAAGGTGAAGG+GGG | + | tig0027943:15089-15108 | None:intergenic | 60.0% | |
| GGACTCAAATGGTGTGCCGG+TGG | + | tig0027943:15226-15245 | None:intergenic | 60.0% | |
| GAGGTGGAAGGTGAAGGGGG+AGG | + | tig0027943:15086-15105 | None:intergenic | 65.0% | |
| GAGGTGGAAGGTGAAGGGGG+AGG | + | tig0027943:15086-15105 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027943 | gene | 14928 | 15878 | 14928 | ID=Msa1436470;Name=Msa1436470 |
| tig0027943 | mRNA | 14928 | 15878 | 14928 | ID=Msa1436470-mRNA-1;Parent=Msa1436470;Name=Msa1436470-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|316 |
| tig0027943 | exon | 14928 | 15878 | 14928 | ID=Msa1436470-mRNA-1:exon:10248;Parent=Msa1436470-mRNA-1 |
| tig0027943 | CDS | 14928 | 15878 | 14928 | ID=Msa1436470-mRNA-1:cds;Parent=Msa1436470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
