AlfalfaGEDB | Msa1437510

M. sativa cultivar zhongmu-4 / Msa1437510

KEGG: K08494
GO: GO:0000149 GO:0003674 GO:0005484 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0005789 GO:0005794 GO:0005798 GO:0005886 GO:0005911 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006888 GO:0006891 GO:0006892 GO:0006896 GO:0006906 GO:0006996 GO:0007034 GO:0008104 GO:0008150 GO:0009506 GO:0009987 GO:0010008 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016197 GO:0016482 GO:0030054 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031201 GO:0031410 GO:0031902 GO:0031982 GO:0031984 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042147 GO:0042175 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048193 GO:0048280 GO:0048284 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072594 GO:0072665 GO:0072666 GO:0090174 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098827
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1437510	XP_003609873.1	100.000	105	0	0	1	105	165	269	2.92e-68	216

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1437510	sp\|Q9LNH6\|NPS12_ARATH	86.869	99	13	0	1	99	166	264	8.12e-52	166

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1437510	G7JQ41	100.000	105	0	0	1	105	165	269	1.40e-68	216

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa1427600	Msa1437510	-0.802767	4.799690e-49	-8.615850e-47
Msa0436840	Msa1437510	0.817268	3.601497e-52	-8.615850e-47
Msa1219540	Msa1437510	0.830797	2.398672e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1437510	MtrunA17_Chr4g0069271	100.000	105	0	0	1	105	165	269	2.69e-72	216
Msa1437510	MtrunA17_Chr2g0302561	96.040	101	4	0	1	101	165	265	2.26e-66	200
Msa1437510	MtrunA17_Chr4g0055321	76.768	99	21	1	1	97	162	260	2.02e-42	139

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1437510	AT1G48240.2	86.869	99	13	0	1	99	115	213	3.45e-53	166
Msa1437510	AT1G48240.1	86.869	99	13	0	1	99	166	264	8.26e-53	166
Msa1437510	AT3G17440.1	85.000	100	15	0	1	100	166	265	2.30e-52	165
Msa1437510	AT2G35190.1	79.798	99	18	1	1	97	164	262	1.76e-41	137
Msa1437510	AT3G17440.2	85.106	47	7	0	1	47	166	212	1.73e-21	84.7

Find 39 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATATTAGAGGATTGCTTTC+TGG	0.171816	tig0028307:-54476	Msa1437510:three_prime_UTR
ATCCCAACAACAAAGATATT+AGG	0.293546	tig0028307:-54641	Msa1437510:CDS
CCTTCAAGGTAGAAGCAGTT+TGG	0.343816	tig0028307:+55335	None:intergenic
TCCCAACAACAAAGATATTA+GGG	0.359712	tig0028307:-54640	Msa1437510:CDS
CTTCAAGGTAGAAGCAGTTT+GGG	0.360070	tig0028307:+55336	None:intergenic
ATCCCTAATATCTTTGTTGT+TGG	0.373848	tig0028307:+54638	None:intergenic
CAAACTTACTTGGCCCTTCA+AGG	0.377735	tig0028307:+55321	None:intergenic
TCTTATCAATCGAATATTAG+AGG	0.380556	tig0028307:-54488	Msa1437510:three_prime_UTR
CCAAACTGCTTCTACCTTGA+AGG	0.383146	tig0028307:-55335	Msa1437510:CDS
TCCCTAATATCTTTGTTGTT+GGG	0.383563	tig0028307:+54639	None:intergenic
TCCCAACTTGTTAAGGAGAT+TGG	0.395927	tig0028307:-55154	Msa1437510:CDS
TCATACCTTCACGACAATAA+TGG	0.396104	tig0028307:+54980	None:intergenic
AAAAGCCTCCTTGAGGGAAC+TGG	0.407527	tig0028307:+54597	None:intergenic
GAAGGCCTCCCAACTTGTTA+AGG	0.410294	tig0028307:-55161	Msa1437510:CDS
AAAGATATTAGGGATATTCC+AGG	0.415143	tig0028307:-54630	Msa1437510:CDS
CAATTCTAGTCCTGCCAACT+TGG	0.415915	tig0028307:-54518	Msa1437510:three_prime_UTR
AATCATGCAGACTGAACAAA+TGG	0.422006	tig0028307:-55227	Msa1437510:intron
GGAACTGGAGGCGCCAATCC+TGG	0.433221	tig0028307:+54612	None:intergenic
TGTTAAGGAGATTGGTAGAC+AGG	0.437254	tig0028307:-55146	Msa1437510:intron
ACCAATCTCCTTAACAAGTT+GGG	0.449301	tig0028307:+55153	None:intergenic
TACCAATCTCCTTAACAAGT+TGG	0.487013	tig0028307:+55152	None:intergenic
TATTAGGGATATTCCAGGAT+TGG	0.491096	tig0028307:-54625	Msa1437510:CDS
GTACATCAAACAATTGAAGT+TGG	0.510767	tig0028307:-55361	None:intergenic
AATCAAGCTCATTAACAATA+CGG	0.513503	tig0028307:+55203	None:intergenic
ACGTACAAAAGCCTCCTTGA+GGG	0.543026	tig0028307:+54591	None:intergenic
TTTCTGTTTCTTATCGTCTG+TGG	0.544072	tig0028307:-55011	Msa1437510:CDS
AGAACAAGAACCAAGTTGGC+AGG	0.550428	tig0028307:+54508	None:intergenic
GATAAGAACAAGAACCAAGT+TGG	0.555394	tig0028307:+54504	None:intergenic
CAAACTGCTTCTACCTTGAA+GGG	0.570444	tig0028307:-55334	Msa1437510:CDS
ATTAGAGGATTGCTTTCTGG+AGG	0.581140	tig0028307:-54473	Msa1437510:three_prime_UTR
TGGCGCCTCCAGTTCCCTCA+AGG	0.584416	tig0028307:-54605	Msa1437510:CDS
CGCCTCCAGTTCCCTCAAGG+AGG	0.588015	tig0028307:-54602	Msa1437510:CDS
ATTAAGAGACGTGGCACTCG+AGG	0.588508	tig0028307:+54351	None:intergenic
AGCCTCCTTGAGGGAACTGG+AGG	0.604127	tig0028307:+54600	None:intergenic
GATTGCCATTATTGTCGTGA+AGG	0.622761	tig0028307:-54985	Msa1437510:intron
ATCATGCAGACTGAACAAAT+GGG	0.629726	tig0028307:-55226	Msa1437510:intron
AATCTCCTTAACAAGTTGGG+AGG	0.641193	tig0028307:+55156	None:intergenic
GATTGTTACATTAAGAGACG+TGG	0.682955	tig0028307:+54342	None:intergenic
TACGTACAAAAGCCTCCTTG+AGG	0.702572	tig0028307:+54590	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAATTATTAGAGCAAAT+TGG	+	tig0028307:54802-54821	None:intergenic	15.0%
!!!	TCAACTATTTTAAATAACTT+TGG	-	tig0028307:54840-54859	Msa1437510:intron	15.0%
!!	ATAAAATTATTAGAGCAAAT+TGG	+	tig0028307:54802-54821	None:intergenic	15.0%
!!!	TCAACTATTTTAAATAACTT+TGG	-	tig0028307:54840-54859	Msa1437510:intron	15.0%
!!!	AATTCAGTTTTCAATAAAGA+AGG	-	tig0028307:54518-54537	Msa1437510:three_prime_UTR	20.0%
!!!	CTTTAATTTCCTTGTTTATA+TGG	-	tig0028307:54577-54596	Msa1437510:CDS	20.0%
!!	AGAGAATATATCAACAAATT+AGG	+	tig0028307:54766-54785	None:intergenic	20.0%
!!	TGAAAAAAGAAAGAATTAAC+TGG	+	tig0028307:55266-55285	None:intergenic	20.0%
!!!	AATTCAGTTTTCAATAAAGA+AGG	-	tig0028307:54518-54537	Msa1437510:three_prime_UTR	20.0%
!!!	CTTTAATTTCCTTGTTTATA+TGG	-	tig0028307:54577-54596	Msa1437510:CDS	20.0%
!!	AGAGAATATATCAACAAATT+AGG	+	tig0028307:54766-54785	None:intergenic	20.0%
!!	TGAAAAAAGAAAGAATTAAC+TGG	+	tig0028307:55266-55285	None:intergenic	20.0%
!	CAATTCAAATCAAACTTACT+TGG	+	tig0028307:54389-54408	None:intergenic	25.0%
!	AATCAAGCTCATTAACAATA+CGG	+	tig0028307:54497-54516	None:intergenic	25.0%
!	ACATTATTCTACTTGAGAAA+AGG	-	tig0028307:54867-54886	Msa1437510:intron	25.0%
!	TCTTATCAATCGAATATTAG+AGG	-	tig0028307:55209-55228	Msa1437510:CDS	25.0%
!	CAATTCAAATCAAACTTACT+TGG	+	tig0028307:54389-54408	None:intergenic	25.0%
!	AATCAAGCTCATTAACAATA+CGG	+	tig0028307:54497-54516	None:intergenic	25.0%
!	ACATTATTCTACTTGAGAAA+AGG	-	tig0028307:54867-54886	Msa1437510:intron	25.0%
!	TCTTATCAATCGAATATTAG+AGG	-	tig0028307:55209-55228	Msa1437510:CDS	25.0%
	GAATTGAGTATGCTATAAGA+AGG	-	tig0028307:54403-54422	Msa1437510:three_prime_UTR	30.0%
	ATCCCAACAACAAAGATATT+AGG	-	tig0028307:55056-55075	Msa1437510:intron	30.0%
	TCCCAACAACAAAGATATTA+GGG	-	tig0028307:55057-55076	Msa1437510:intron	30.0%
!!	TCCCTAATATCTTTGTTGTT+GGG	+	tig0028307:55061-55080	None:intergenic	30.0%
!	ATCCCTAATATCTTTGTTGT+TGG	+	tig0028307:55062-55081	None:intergenic	30.0%
	AAAGATATTAGGGATATTCC+AGG	-	tig0028307:55067-55086	Msa1437510:intron	30.0%
	AATATTAGAGGATTGCTTTC+TGG	-	tig0028307:55221-55240	Msa1437510:intron	30.0%
	GAATTGAGTATGCTATAAGA+AGG	-	tig0028307:54403-54422	Msa1437510:three_prime_UTR	30.0%
	ATCCCAACAACAAAGATATT+AGG	-	tig0028307:55056-55075	Msa1437510:intron	30.0%
	TCCCAACAACAAAGATATTA+GGG	-	tig0028307:55057-55076	Msa1437510:intron	30.0%
!!	TCCCTAATATCTTTGTTGTT+GGG	+	tig0028307:55061-55080	None:intergenic	30.0%
!	ATCCCTAATATCTTTGTTGT+TGG	+	tig0028307:55062-55081	None:intergenic	30.0%
	AAAGATATTAGGGATATTCC+AGG	-	tig0028307:55067-55086	Msa1437510:intron	30.0%
	AATATTAGAGGATTGCTTTC+TGG	-	tig0028307:55221-55240	Msa1437510:intron	30.0%
	CTATAAGAAGGAAAGAGTCT+AGG	-	tig0028307:54415-54434	Msa1437510:three_prime_UTR	35.0%
	AATCATGCAGACTGAACAAA+TGG	-	tig0028307:54470-54489	Msa1437510:three_prime_UTR	35.0%
	ATCATGCAGACTGAACAAAT+GGG	-	tig0028307:54471-54490	Msa1437510:three_prime_UTR	35.0%
	ACCAATCTCCTTAACAAGTT+GGG	+	tig0028307:54547-54566	None:intergenic	35.0%
	TACCAATCTCCTTAACAAGT+TGG	+	tig0028307:54548-54567	None:intergenic	35.0%
	TACAGCAGTCCATATAAACA+AGG	+	tig0028307:54589-54608	None:intergenic	35.0%
	TATTTCTTCCAAACCTGTCA+TGG	-	tig0028307:54607-54626	Msa1437510:CDS	35.0%
!	TTTCTGTTTCTTATCGTCTG+TGG	-	tig0028307:54686-54705	Msa1437510:intron	35.0%
	TCATACCTTCACGACAATAA+TGG	+	tig0028307:54720-54739	None:intergenic	35.0%
	TGTGCACATAAACATGCAAT+AGG	+	tig0028307:54941-54960	None:intergenic	35.0%
	TATTAGGGATATTCCAGGAT+TGG	-	tig0028307:55072-55091	Msa1437510:intron	35.0%
	GATAAGAACAAGAACCAAGT+TGG	+	tig0028307:55196-55215	None:intergenic	35.0%
	CTATAAGAAGGAAAGAGTCT+AGG	-	tig0028307:54415-54434	Msa1437510:three_prime_UTR	35.0%
	AATCATGCAGACTGAACAAA+TGG	-	tig0028307:54470-54489	Msa1437510:three_prime_UTR	35.0%
	ATCATGCAGACTGAACAAAT+GGG	-	tig0028307:54471-54490	Msa1437510:three_prime_UTR	35.0%
	ACCAATCTCCTTAACAAGTT+GGG	+	tig0028307:54547-54566	None:intergenic	35.0%
	TACCAATCTCCTTAACAAGT+TGG	+	tig0028307:54548-54567	None:intergenic	35.0%
	TACAGCAGTCCATATAAACA+AGG	+	tig0028307:54589-54608	None:intergenic	35.0%
	TATTTCTTCCAAACCTGTCA+TGG	-	tig0028307:54607-54626	Msa1437510:CDS	35.0%
!	TTTCTGTTTCTTATCGTCTG+TGG	-	tig0028307:54686-54705	Msa1437510:intron	35.0%
	TCATACCTTCACGACAATAA+TGG	+	tig0028307:54720-54739	None:intergenic	35.0%
	TGTGCACATAAACATGCAAT+AGG	+	tig0028307:54941-54960	None:intergenic	35.0%
	TATTAGGGATATTCCAGGAT+TGG	-	tig0028307:55072-55091	Msa1437510:intron	35.0%
	GATAAGAACAAGAACCAAGT+TGG	+	tig0028307:55196-55215	None:intergenic	35.0%
	CTTCAAGGTAGAAGCAGTTT+GGG	+	tig0028307:54364-54383	None:intergenic	40.0%
	CAAACTGCTTCTACCTTGAA+GGG	-	tig0028307:54363-54382	Msa1437510:three_prime_UTR	40.0%
!	AATCTCCTTAACAAGTTGGG+AGG	+	tig0028307:54544-54563	None:intergenic	40.0%
!!	TCCCAACTTGTTAAGGAGAT+TGG	-	tig0028307:54543-54562	Msa1437510:three_prime_UTR	40.0%
	TGTTAAGGAGATTGGTAGAC+AGG	-	tig0028307:54551-54570	Msa1437510:exon	40.0%
	ACTTAGTTCCATGACAGGTT+TGG	+	tig0028307:54618-54637	None:intergenic	40.0%
	TCTGTAGCAACCTGATAACA+GGG	+	tig0028307:54650-54669	None:intergenic	40.0%
	GATTGCCATTATTGTCGTGA+AGG	-	tig0028307:54712-54731	Msa1437510:intron	40.0%
	GCAATCACTATTCACTAGCA+CGG	+	tig0028307:54919-54938	None:intergenic	40.0%
	ATTAGAGGATTGCTTTCTGG+AGG	-	tig0028307:55224-55243	Msa1437510:intron	40.0%
	CTTCAAGGTAGAAGCAGTTT+GGG	+	tig0028307:54364-54383	None:intergenic	40.0%
	CAAACTGCTTCTACCTTGAA+GGG	-	tig0028307:54363-54382	Msa1437510:three_prime_UTR	40.0%
!	AATCTCCTTAACAAGTTGGG+AGG	+	tig0028307:54544-54563	None:intergenic	40.0%
!!	TCCCAACTTGTTAAGGAGAT+TGG	-	tig0028307:54543-54562	Msa1437510:three_prime_UTR	40.0%
	TGTTAAGGAGATTGGTAGAC+AGG	-	tig0028307:54551-54570	Msa1437510:exon	40.0%
	ACTTAGTTCCATGACAGGTT+TGG	+	tig0028307:54618-54637	None:intergenic	40.0%
	TCTGTAGCAACCTGATAACA+GGG	+	tig0028307:54650-54669	None:intergenic	40.0%
	GATTGCCATTATTGTCGTGA+AGG	-	tig0028307:54712-54731	Msa1437510:intron	40.0%
	GCAATCACTATTCACTAGCA+CGG	+	tig0028307:54919-54938	None:intergenic	40.0%
	ATTAGAGGATTGCTTTCTGG+AGG	-	tig0028307:55224-55243	Msa1437510:intron	40.0%
	CCTTCAAGGTAGAAGCAGTT+TGG	+	tig0028307:54365-54384	None:intergenic	45.0%
	CCAAACTGCTTCTACCTTGA+AGG	-	tig0028307:54362-54381	Msa1437510:three_prime_UTR	45.0%
	CAAACTTACTTGGCCCTTCA+AGG	+	tig0028307:54379-54398	None:intergenic	45.0%
	GGACAACTTAGTTCCATGAC+AGG	+	tig0028307:54623-54642	None:intergenic	45.0%
	TTGTCCTTACCCCTGTTATC+AGG	-	tig0028307:54637-54656	Msa1437510:CDS	45.0%
	CTGTAGCAACCTGATAACAG+GGG	+	tig0028307:54649-54668	None:intergenic	45.0%
	GTCTGTAGCAACCTGATAAC+AGG	+	tig0028307:54651-54670	None:intergenic	45.0%
!	TGAGAAAAGGTGCGAGAACT+TGG	-	tig0028307:54880-54899	Msa1437510:intron	45.0%
	GTGCGAGAACTTGGATTTCA+TGG	-	tig0028307:54889-54908	Msa1437510:intron	45.0%
	ACGTACAAAAGCCTCCTTGA+GGG	+	tig0028307:55109-55128	None:intergenic	45.0%
	TACGTACAAAAGCCTCCTTG+AGG	+	tig0028307:55110-55129	None:intergenic	45.0%
!	CAAGGAGGCTTTTGTACGTA+CGG	-	tig0028307:55110-55129	Msa1437510:intron	45.0%
	CAATTCTAGTCCTGCCAACT+TGG	-	tig0028307:55179-55198	Msa1437510:CDS	45.0%
!	AGAACAAGAACCAAGTTGGC+AGG	+	tig0028307:55192-55211	None:intergenic	45.0%
	CCTTCAAGGTAGAAGCAGTT+TGG	+	tig0028307:54365-54384	None:intergenic	45.0%
	CCAAACTGCTTCTACCTTGA+AGG	-	tig0028307:54362-54381	Msa1437510:three_prime_UTR	45.0%
	CAAACTTACTTGGCCCTTCA+AGG	+	tig0028307:54379-54398	None:intergenic	45.0%
	GGACAACTTAGTTCCATGAC+AGG	+	tig0028307:54623-54642	None:intergenic	45.0%
	TTGTCCTTACCCCTGTTATC+AGG	-	tig0028307:54637-54656	Msa1437510:CDS	45.0%
	CTGTAGCAACCTGATAACAG+GGG	+	tig0028307:54649-54668	None:intergenic	45.0%
	GTCTGTAGCAACCTGATAAC+AGG	+	tig0028307:54651-54670	None:intergenic	45.0%
!	TGAGAAAAGGTGCGAGAACT+TGG	-	tig0028307:54880-54899	Msa1437510:intron	45.0%
	GTGCGAGAACTTGGATTTCA+TGG	-	tig0028307:54889-54908	Msa1437510:intron	45.0%
	ACGTACAAAAGCCTCCTTGA+GGG	+	tig0028307:55109-55128	None:intergenic	45.0%
	TACGTACAAAAGCCTCCTTG+AGG	+	tig0028307:55110-55129	None:intergenic	45.0%
!	CAAGGAGGCTTTTGTACGTA+CGG	-	tig0028307:55110-55129	Msa1437510:intron	45.0%
	CAATTCTAGTCCTGCCAACT+TGG	-	tig0028307:55179-55198	Msa1437510:CDS	45.0%
!	AGAACAAGAACCAAGTTGGC+AGG	+	tig0028307:55192-55211	None:intergenic	45.0%
!!	GAAGGCCTCCCAACTTGTTA+AGG	-	tig0028307:54536-54555	Msa1437510:three_prime_UTR	50.0%
	GCAACCTGATAACAGGGGTA+AGG	+	tig0028307:54644-54663	None:intergenic	50.0%
	AAAAGCCTCCTTGAGGGAAC+TGG	+	tig0028307:55103-55122	None:intergenic	50.0%
!	AGGCTTTTGTACGTACGGAC+TGG	-	tig0028307:55115-55134	Msa1437510:intron	50.0%
	ATTAAGAGACGTGGCACTCG+AGG	+	tig0028307:55349-55368	None:intergenic	50.0%
!!	GAAGGCCTCCCAACTTGTTA+AGG	-	tig0028307:54536-54555	Msa1437510:three_prime_UTR	50.0%
	GCAACCTGATAACAGGGGTA+AGG	+	tig0028307:54644-54663	None:intergenic	50.0%
	AAAAGCCTCCTTGAGGGAAC+TGG	+	tig0028307:55103-55122	None:intergenic	50.0%
!	AGGCTTTTGTACGTACGGAC+TGG	-	tig0028307:55115-55134	Msa1437510:intron	50.0%
	ATTAAGAGACGTGGCACTCG+AGG	+	tig0028307:55349-55368	None:intergenic	50.0%
	AGCCTCCTTGAGGGAACTGG+AGG	+	tig0028307:55100-55119	None:intergenic	60.0%
	AGCCTCCTTGAGGGAACTGG+AGG	+	tig0028307:55100-55119	None:intergenic	60.0%
!!	GGAACTGGAGGCGCCAATCC+TGG	+	tig0028307:55088-55107	None:intergenic	65.0%
	TGGCGCCTCCAGTTCCCTCA+AGG	-	tig0028307:55092-55111	Msa1437510:intron	65.0%
	CGCCTCCAGTTCCCTCAAGG+AGG	-	tig0028307:55095-55114	Msa1437510:intron	65.0%
!!	GGAACTGGAGGCGCCAATCC+TGG	+	tig0028307:55088-55107	None:intergenic	65.0%
	TGGCGCCTCCAGTTCCCTCA+AGG	-	tig0028307:55092-55111	Msa1437510:intron	65.0%
	CGCCTCCAGTTCCCTCAAGG+AGG	-	tig0028307:55095-55114	Msa1437510:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0028307	gene	54345	55374	54345	ID=Msa1437510;Name=Msa1437510
tig0028307	mRNA	54345	55374	54345	ID=Msa1437510-mRNA-1;Parent=Msa1437510;Name=Msa1437510-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0\|1\|0.75\|1\|1\|1\|4\|221\|105
tig0028307	exon	54345	54670	54345	ID=Msa1437510-mRNA-1:exon:10714;Parent=Msa1437510-mRNA-1
tig0028307	exon	54986	55060	54986	ID=Msa1437510-mRNA-1:exon:10713;Parent=Msa1437510-mRNA-1
tig0028307	exon	55147	55239	55147	ID=Msa1437510-mRNA-1:exon:10712;Parent=Msa1437510-mRNA-1
tig0028307	exon	55330	55374	55330	ID=Msa1437510-mRNA-1:exon:10711;Parent=Msa1437510-mRNA-1
tig0028307	CDS	55330	55374	55330	ID=Msa1437510-mRNA-1:cds;Parent=Msa1437510-mRNA-1
tig0028307	CDS	55147	55239	55147	ID=Msa1437510-mRNA-1:cds;Parent=Msa1437510-mRNA-1
tig0028307	CDS	54986	55060	54986	ID=Msa1437510-mRNA-1:cds;Parent=Msa1437510-mRNA-1
tig0028307	CDS	54566	54670	54566	ID=Msa1437510-mRNA-1:cds;Parent=Msa1437510-mRNA-1
tig0028307	three_prime_UTR	54345	54565	54345	ID=Msa1437510-mRNA-1:three_prime_utr;Parent=Msa1437510-mRNA-1

Gene Sequence	>Msa1437510 ACAATTGAAGTTGGCACCCAAACTGCTTCTACCTTGAAGGGCCAAACTGAACAAATGGGCCGTATTGTTAATGAGCTTGATTCAATTCAGTTTTCAATAAAGAAGGCCTCCCAACTTGTTAAGGAGATTGGTAGACAGGTTGCTACAGACAAGTGCATCATGCTTTTTCTGTTTCTTATCGTCTGTGGTGTGATTGCCATTATTGTCGTGAAGATTGTGAATCCCAACAACAAAGATATTAGGGATATTCCAGGATTGGCGCCTCCAGTTCCCTCAAGGAGGCTTTTGTACGTACGGACTGGAGAACTTTTTGATTAA
Protein sequence	>Msa1437510 TIEVGTQTASTLKGQTEQMGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPVPSRRLLYVRTGELFD*