Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436840 | XP_003609873.1 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436840 | sp|Q9LRP1|NPS13_ARATH | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.62e-155 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436840 | G7JQ41 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa0436840 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
| Msa0180100 | Msa0436840 | -0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0184510 | Msa0436840 | -0.809463 | 1.868879e-50 | -8.615850e-47 |
| Msa0371350 | Msa0436840 | -0.805592 | 1.238956e-49 | -8.615850e-47 |
| Msa0382860 | Msa0436840 | 0.810480 | 1.128575e-50 | -8.615850e-47 |
| Msa0419420 | Msa0436840 | -0.807947 | 3.940465e-50 | -8.615850e-47 |
| Msa0432970 | Msa0436840 | 0.802464 | 5.541293e-49 | -8.615850e-47 |
| Msa0436840 | Msa0477030 | 0.810918 | 9.074721e-51 | -8.615850e-47 |
| Msa0436840 | Msa0608820 | 0.814603 | 1.416483e-51 | -8.615850e-47 |
| Msa0436840 | Msa0610700 | -0.809209 | 2.119097e-50 | -8.615850e-47 |
| Msa0436840 | Msa0691610 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0436840 | Msa0718360 | 0.814890 | 1.223465e-51 | -8.615850e-47 |
| Msa0436840 | Msa0745140 | 0.802149 | 6.433019e-49 | -8.615850e-47 |
| Msa0436840 | Msa0759430 | 0.819036 | 1.433784e-52 | -8.615850e-47 |
| Msa0436840 | Msa0776640 | 0.801019 | 1.096924e-48 | -8.615850e-47 |
| Msa0436840 | Msa0825920 | 0.801514 | 8.685998e-49 | -8.615850e-47 |
| Msa0436840 | Msa0887100 | -0.809985 | 1.443293e-50 | -8.615850e-47 |
| Msa0436840 | Msa0913140 | -0.812331 | 4.473883e-51 | -8.615850e-47 |
| Msa0436840 | Msa0931550 | -0.804350 | 2.253695e-49 | -8.615850e-47 |
| Msa0436840 | Msa0950470 | -0.805738 | 1.154723e-49 | -8.615850e-47 |
| Msa0436840 | Msa0950570 | -0.805114 | 1.560879e-49 | -8.615850e-47 |
| Msa0436840 | Msa1024570 | 0.811529 | 6.690828e-51 | -8.615850e-47 |
| Msa0436840 | Msa1031180 | 0.839455 | 1.568134e-57 | -8.615850e-47 |
| Msa0436840 | Msa1063190 | 0.854924 | 8.898003e-62 | -8.615850e-47 |
| Msa0436840 | Msa1070360 | 0.804816 | 1.801668e-49 | -8.615850e-47 |
| Msa0436840 | Msa1078590 | -0.805993 | 1.020575e-49 | -8.615850e-47 |
| Msa0436840 | Msa1078760 | -0.805700 | 1.176289e-49 | -8.615850e-47 |
| Msa0436840 | Msa1119430 | 0.831230 | 1.877692e-55 | -8.615850e-47 |
| Msa0436840 | Msa1190350 | -0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0436840 | Msa1205270 | -0.812211 | 4.751581e-51 | -8.615850e-47 |
| Msa0436840 | Msa1219540 | 0.998378 | 2.358168e-263 | -8.615850e-47 |
| Msa0436840 | Msa1236860 | -0.802283 | 6.037000e-49 | -8.615850e-47 |
| Msa0436840 | Msa1243630 | -0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0436840 | Msa1255030 | -0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa0436840 | Msa1266120 | -0.800758 | 1.240345e-48 | -8.615850e-47 |
| Msa0436840 | Msa1297220 | -0.819488 | 1.131104e-52 | -8.615850e-47 |
| Msa0436840 | Msa1303820 | -0.805327 | 1.408004e-49 | -8.615850e-47 |
| Msa0436840 | Msa1333210 | 0.973826 | 4.320864e-137 | -8.615850e-47 |
| Msa0436840 | Msa1333240 | 0.846010 | 2.840690e-59 | -8.615850e-47 |
| Msa0436840 | Msa1343450 | -0.824613 | 7.340856e-54 | -8.615850e-47 |
| Msa0436840 | Msa1371300 | 0.808969 | 2.384819e-50 | -8.615850e-47 |
| Msa0436840 | Msa1437510 | 0.817268 | 3.601497e-52 | -8.615850e-47 |
| Msa0256540 | Msa0436840 | 0.809108 | 2.226723e-50 | -8.615850e-47 |
| Msa0266140 | Msa0436840 | -0.800340 | 1.509302e-48 | -8.615850e-47 |
| Msa0267450 | Msa0436840 | -0.805002 | 1.647108e-49 | -8.615850e-47 |
| Msa0267510 | Msa0436840 | -0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0304060 | Msa0436840 | -0.803195 | 3.914742e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436840 | MtrunA17_Chr4g0069271 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Msa0436840 | MtrunA17_Chr2g0302561 | 88.679 | 265 | 30 | 0 | 1 | 265 | 1 | 265 | 1.33e-167 | 464 |
| Msa0436840 | MtrunA17_Chr4g0055321 | 64.202 | 257 | 87 | 2 | 7 | 261 | 7 | 260 | 5.63e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0436840 | AT3G17440.1 | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.65e-156 | 436 |
| Msa0436840 | AT1G48240.1 | 83.333 | 264 | 43 | 1 | 1 | 263 | 1 | 264 | 2.19e-154 | 431 |
| Msa0436840 | AT3G17440.2 | 83.568 | 213 | 34 | 1 | 1 | 212 | 1 | 213 | 9.41e-126 | 357 |
| Msa0436840 | AT1G48240.2 | 84.038 | 213 | 33 | 1 | 52 | 263 | 1 | 213 | 1.89e-122 | 348 |
| Msa0436840 | AT2G35190.1 | 67.954 | 259 | 76 | 3 | 7 | 261 | 7 | 262 | 3.79e-111 | 321 |
Find 92 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAACAATCCAAATATTT+AGG | 0.090500 | 3_2:+90687928 | Msa0436840:three_prime_UTR |
| TCTCTCTAGCCCTAAATATT+TGG | 0.162380 | 3_2:-90687938 | None:intergenic |
| AATATTAGAGGATTGCTTTC+TGG | 0.171816 | 3_2:+90687782 | Msa0436840:three_prime_UTR |
| GAATGAATGTGTTTGAAAAT+TGG | 0.232521 | 3_2:-90682928 | None:intergenic |
| CTTTAATCTTATCCAGCTTC+TGG | 0.274677 | 3_2:-90684116 | None:intergenic |
| ATCCCAACAACAAAGATATT+AGG | 0.293546 | 3_2:+90687617 | Msa0436840:CDS |
| TGTAACAATCCAAATATTTA+GGG | 0.294643 | 3_2:+90687929 | Msa0436840:three_prime_UTR |
| AGTTGCTTGTTCACTTCTTC+GGG | 0.302974 | 3_2:-90684831 | None:intergenic |
| GAGTTGCTTGTTCACTTCTT+CGG | 0.321882 | 3_2:-90684832 | None:intergenic |
| TTTGCAGTCCCTCATCTTCC+CGG | 0.331240 | 3_2:-90684175 | None:intergenic |
| CAGCTGAGTACTTTGTCTAT+TGG | 0.333441 | 3_2:-90684142 | None:intergenic |
| CCTTCAAGGTAGAAGCAGTT+TGG | 0.343816 | 3_2:-90686922 | None:intergenic |
| TCCCAACAACAAAGATATTA+GGG | 0.359712 | 3_2:+90687618 | Msa0436840:CDS |
| CTTCAAGGTAGAAGCAGTTT+GGG | 0.360070 | 3_2:-90686921 | None:intergenic |
| TTTGAAACTATTTGTTGAAT+CGG | 0.373263 | 3_2:+90688069 | Msa0436840:three_prime_UTR |
| ATCCCTAATATCTTTGTTGT+TGG | 0.373848 | 3_2:-90687620 | None:intergenic |
| CAAACTTACTTGGCCCTTCA+AGG | 0.377735 | 3_2:-90686936 | None:intergenic |
| TCTTATCAATCGAATATTAG+AGG | 0.380556 | 3_2:+90687770 | Msa0436840:three_prime_UTR |
| CCAAACTGCTTCTACCTTGA+AGG | 0.383146 | 3_2:+90686922 | Msa0436840:CDS |
| TCCCTAATATCTTTGTTGTT+GGG | 0.383563 | 3_2:-90687619 | None:intergenic |
| TCCCAACTTGTTAAGGAGAT+TGG | 0.395927 | 3_2:+90687104 | Msa0436840:CDS |
| TCATACCTTCACGACAATAA+TGG | 0.396104 | 3_2:-90687278 | None:intergenic |
| CTACTTGTACTTGAAATTTG+TGG | 0.402605 | 3_2:+90687971 | Msa0436840:three_prime_UTR |
| AAAAGCCTCCTTGAGGGAAC+TGG | 0.407527 | 3_2:-90687661 | None:intergenic |
| GAAGGCCTCCCAACTTGTTA+AGG | 0.410294 | 3_2:+90687097 | Msa0436840:CDS |
| TTGAAACTATTTGTTGAATC+GGG | 0.411278 | 3_2:+90688070 | Msa0436840:three_prime_UTR |
| AAAGATATTAGGGATATTCC+AGG | 0.415143 | 3_2:+90687628 | Msa0436840:CDS |
| CAATTCTAGTCCTGCCAACT+TGG | 0.415915 | 3_2:+90687740 | Msa0436840:three_prime_UTR |
| AATCAAGAACTTGTCAATGC+TGG | 0.416592 | 3_2:+90686749 | Msa0436840:CDS |
| AATCATGCAGACTGAACAAA+TGG | 0.425940 | 3_2:+90687031 | Msa0436840:intron |
| GGAACTGGAGGCGCCAATCC+TGG | 0.433221 | 3_2:-90687646 | None:intergenic |
| TGTTAAGGAGATTGGTAGAC+AGG | 0.437254 | 3_2:+90687112 | Msa0436840:CDS |
| ACCAATCTCCTTAACAAGTT+GGG | 0.449301 | 3_2:-90687105 | None:intergenic |
| CAGAAATGGCTTCCAGAAGC+TGG | 0.449482 | 3_2:+90684104 | Msa0436840:intron |
| TGCCAATTGAACATTTCCTT+CGG | 0.451709 | 3_2:-90685597 | None:intergenic |
| CATGGATCTGTTCGAGCTGA+GGG | 0.453043 | 3_2:-90683124 | None:intergenic |
| AGCCGAAGGAAATGTTCAAT+TGG | 0.469264 | 3_2:+90685595 | Msa0436840:CDS |
| GATCGTGAAATTAAAGATGA+AGG | 0.472497 | 3_2:+90684798 | Msa0436840:CDS |
| GGAAATGTTCAATTGGCATC+AGG | 0.483291 | 3_2:+90685602 | Msa0436840:CDS |
| TACCAATCTCCTTAACAAGT+TGG | 0.487013 | 3_2:-90687106 | None:intergenic |
| TATTAGGGATATTCCAGGAT+TGG | 0.491096 | 3_2:+90687633 | Msa0436840:CDS |
| ATCAAGAACTTGTCAATGCT+GGG | 0.492269 | 3_2:+90686750 | Msa0436840:CDS |
| CAATAGACAAAGTACTCAGC+TGG | 0.497315 | 3_2:+90684143 | Msa0436840:CDS |
| ACACAACGGAACGCAGAAGT+TGG | 0.500757 | 3_2:-90682835 | None:intergenic |
| GTACATCAAACAATTGAAGT+TGG | 0.510767 | 3_2:+90686896 | Msa0436840:CDS |
| AATCAAGCTCATTAACAATA+CGG | 0.513503 | 3_2:-90687055 | None:intergenic |
| GGAAGATGAGGGACTGCAAA+AGG | 0.516525 | 3_2:+90684178 | Msa0436840:CDS |
| CATCTTCAAGTTGGAAGCCA+TGG | 0.518612 | 3_2:-90683099 | None:intergenic |
| AACTCAATCTCCCGCATCCA+TGG | 0.519687 | 3_2:+90683082 | Msa0436840:exon |
| ACTCAGCTGGAGGAACTCAC+CGG | 0.523198 | 3_2:+90684156 | Msa0436840:CDS |
| GAAATTAAAGATGAAGGTGC+AGG | 0.526092 | 3_2:+90684804 | Msa0436840:CDS |
| GGCTATTGAGAGATCTAAGC+AGG | 0.527773 | 3_2:+90686799 | Msa0436840:CDS |
| CTGAGGGGTCATCTTCAAGT+TGG | 0.529082 | 3_2:-90683108 | None:intergenic |
| CCATGGATCTGTTCGAGCTG+AGG | 0.533024 | 3_2:-90683125 | None:intergenic |
| GAGTTTAACCCTCAAAATCC+CGG | 0.534542 | 3_2:-90683064 | None:intergenic |
| GTTGTTGTTGTTGATGAGAG+AGG | 0.538666 | 3_2:-90683003 | None:intergenic |
| TTGTTGTTAATTGAGAAGAA+AGG | 0.541556 | 3_2:-90682964 | None:intergenic |
| ACGTACAAAAGCCTCCTTGA+GGG | 0.543026 | 3_2:-90687667 | None:intergenic |
| CAATGACGAAAAGCAATCAA+TGG | 0.543601 | 3_2:+90684854 | Msa0436840:CDS |
| TTTCTGTTTCTTATCGTCTG+TGG | 0.544072 | 3_2:+90687247 | Msa0436840:CDS |
| CAAGTTGGAAGCCATGGATG+CGG | 0.544349 | 3_2:-90683093 | None:intergenic |
| AAGTTGGAAGCCATGGATGC+GGG | 0.545305 | 3_2:-90683092 | None:intergenic |
| AGAACAAGAACCAAGTTGGC+AGG | 0.550428 | 3_2:-90687750 | None:intergenic |
| AACAGGTACATGAATACGAT+TGG | 0.551437 | 3_2:+90685521 | Msa0436840:intron |
| AAGATGCATACGCGAGGGCA+CGG | 0.552215 | 3_2:-90683166 | None:intergenic |
| GCTTAGATCTCTCAATAGCC+TGG | 0.553529 | 3_2:-90686796 | None:intergenic |
| GATAAGAACAAGAACCAAGT+TGG | 0.555394 | 3_2:-90687754 | None:intergenic |
| CAAACTGCTTCTACCTTGAA+GGG | 0.570444 | 3_2:+90686923 | Msa0436840:CDS |
| AGGAACTCACCGGGAAGATG+AGG | 0.575887 | 3_2:+90684166 | Msa0436840:CDS |
| ATTAGAGGATTGCTTTCTGG+AGG | 0.581140 | 3_2:+90687785 | Msa0436840:three_prime_UTR |
| TGGCGCCTCCAGTTCCCTCA+AGG | 0.584416 | 3_2:+90687653 | Msa0436840:CDS |
| CGCCTCCAGTTCCCTCAAGG+AGG | 0.588015 | 3_2:+90687656 | Msa0436840:CDS |
| ATTAAGAGACGTGGCACTCG+AGG | 0.588508 | 3_2:-90687907 | None:intergenic |
| CAAGGAGCTAAACTCATATG+TGG | 0.596320 | 3_2:+90685243 | Msa0436840:CDS |
| GGAACTCACCGGGAAGATGA+GGG | 0.597027 | 3_2:+90684167 | Msa0436840:CDS |
| AGCCTCCTTGAGGGAACTGG+AGG | 0.604127 | 3_2:-90687658 | None:intergenic |
| CCTCAGCTCGAACAGATCCA+TGG | 0.604752 | 3_2:+90683125 | Msa0436840:CDS |
| CTCAGCTGGAGGAACTCACC+GGG | 0.605565 | 3_2:+90684157 | Msa0436840:CDS |
| TGTAAATGTGTCTAATTCAG+AGG | 0.607175 | 3_2:+90687994 | Msa0436840:three_prime_UTR |
| GATTGCCATTATTGTCGTGA+AGG | 0.622761 | 3_2:+90687273 | Msa0436840:CDS |
| ATCATGCAGACTGAACAAAT+GGG | 0.622906 | 3_2:+90687032 | Msa0436840:intron |
| GCAAGTGAATCTACAGCCGA+AGG | 0.626899 | 3_2:+90685581 | Msa0436840:CDS |
| GACAATGGATGAGACTGACC+AGG | 0.634633 | 3_2:+90686778 | Msa0436840:CDS |
| AATCTCCTTAACAAGTTGGG+AGG | 0.641193 | 3_2:-90687102 | None:intergenic |
| CAGAAGTTGGACATGTGCTG+TGG | 0.658857 | 3_2:-90682822 | None:intergenic |
| CAATGCTGGGATGAAGACAA+TGG | 0.665195 | 3_2:+90686763 | Msa0436840:CDS |
| TAGACAAAGTACTCAGCTGG+AGG | 0.671294 | 3_2:+90684146 | Msa0436840:CDS |
| GATTGTTACATTAAGAGACG+TGG | 0.682955 | 3_2:-90687916 | None:intergenic |
| ACAGCACGACACAAACACAA+CGG | 0.684691 | 3_2:-90682849 | None:intergenic |
| TACGTACAAAAGCCTCCTTG+AGG | 0.702572 | 3_2:-90687668 | None:intergenic |
| ATGGATCTGTTCGAGCTGAG+GGG | 0.705029 | 3_2:-90683123 | None:intergenic |
| AGATGTCACGAATTTCACCA+TGG | 0.723900 | 3_2:-90683142 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATACACAA+TGG | - | chr3_2:90685100-90685119 | None:intergenic | 10.0% |
| !! | AAAACTTCTATTTATATATA+AGG | - | chr3_2:90685452-90685471 | None:intergenic | 10.0% |
| !!! | TTTTCTCATTTTATTTATTT+TGG | + | chr3_2:90686431-90686450 | Msa0436840:intron | 10.0% |
| !!! | TTTCTCATTTTATTTATTTT+GGG | + | chr3_2:90686432-90686451 | Msa0436840:intron | 10.0% |
| !! | GATTTGATTAATAATAATGT+GGG | + | chr3_2:90684469-90684488 | Msa0436840:intron | 15.0% |
| !!! | TAAATTTGATAGTTGTTTTT+TGG | + | chr3_2:90684564-90684583 | Msa0436840:intron | 15.0% |
| !!! | AAATTTGATAGTTGTTTTTT+GGG | + | chr3_2:90684565-90684584 | Msa0436840:intron | 15.0% |
| !!! | AAATAGAAGTTTTATTCTTT+TGG | + | chr3_2:90685459-90685478 | Msa0436840:intron | 15.0% |
| !! | ATAAAATTATTAGAGCAAAT+TGG | - | chr3_2:90687363-90687382 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAATAACTT+TGG | + | chr3_2:90687401-90687420 | Msa0436840:intron | 15.0% |
| !!! | GCAAAGAAAAAAATGAATTT+TGG | - | chr3_2:90683045-90683064 | None:intergenic | 20.0% |
| !!! | AAATTCATTTTTTTCTTTGC+CGG | + | chr3_2:90683045-90683064 | Msa0436840:five_prime_UTR | 20.0% |
| !! | GATATATAAATCAACAAAGT+TGG | + | chr3_2:90683401-90683420 | Msa0436840:intron | 20.0% |
| !!! | GTTTTAATTAAGAAGTGATA+GGG | - | chr3_2:90683923-90683942 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAAGAAGTGAT+AGG | - | chr3_2:90683924-90683943 | None:intergenic | 20.0% |
| !! | TAAGAACTTATATGCTTATA+AGG | - | chr3_2:90683975-90683994 | None:intergenic | 20.0% |
| !! | TTTAGTAGTGAAAAACTAAA+GGG | - | chr3_2:90684396-90684415 | None:intergenic | 20.0% |
| !! | ATTTAGTAGTGAAAAACTAA+AGG | - | chr3_2:90684397-90684416 | None:intergenic | 20.0% |
| !! | CATAAACAAAACTTCTATAA+TGG | + | chr3_2:90684419-90684438 | Msa0436840:intron | 20.0% |
| !! | CATTATTATTAATCAAATCC+TGG | - | chr3_2:90684468-90684487 | None:intergenic | 20.0% |
| !! | GGATTTGATTAATAATAATG+TGG | + | chr3_2:90684468-90684487 | Msa0436840:intron | 20.0% |
| !! | TAAAATATTCTATATAGAGC+GGG | - | chr3_2:90684538-90684557 | None:intergenic | 20.0% |
| !! | CTAAAATATTCTATATAGAG+CGG | - | chr3_2:90684539-90684558 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAAACATCAATGT+TGG | + | chr3_2:90684645-90684664 | Msa0436840:intron | 20.0% |
| !!! | TACATTTCATGATTTCTTTT+TGG | + | chr3_2:90684703-90684722 | Msa0436840:intron | 20.0% |
| !!! | TTCTTTTTGGAATTTGTTAA+TGG | + | chr3_2:90684716-90684735 | Msa0436840:intron | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | - | chr3_2:90686311-90686330 | None:intergenic | 20.0% |
| !!! | CTTAGATTTGAAATTCAAAA+CGG | + | chr3_2:90686124-90686143 | Msa0436840:intron | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+GGG | + | chr3_2:90686125-90686144 | Msa0436840:intron | 20.0% |
| !! | TCCTTAAAAGAGTTATAAAA+AGG | + | chr3_2:90686259-90686278 | Msa0436840:intron | 20.0% |
| !!! | TCCTTTTTATAACTCTTTTA+AGG | - | chr3_2:90686263-90686282 | None:intergenic | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+AGG | - | chr3_2:90686125-90686144 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | + | chr3_2:90686311-90686330 | Msa0436840:intron | 20.0% |
| !! | TAAAATAAGATAAATGGTGT+GGG | - | chr3_2:90686856-90686875 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATAAATGGTG+TGG | - | chr3_2:90686857-90686876 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCAATAAAGA+AGG | + | chr3_2:90687079-90687098 | Msa0436840:CDS | 20.0% |
| !!! | CTTTAATTTCCTTGTTTATA+TGG | + | chr3_2:90687138-90687157 | Msa0436840:intron | 20.0% |
| !! | AGAGAATATATCAACAAATT+AGG | - | chr3_2:90687327-90687346 | None:intergenic | 20.0% |
| !! | TGAAAAAAGAAAGAATTAAC+TGG | - | chr3_2:90687827-90687846 | None:intergenic | 20.0% |
| !! | ATGTAACAATCCAAATATTT+AGG | + | chr3_2:90687928-90687947 | Msa0436840:three_prime_UTR | 20.0% |
| !! | TGTAACAATCCAAATATTTA+GGG | + | chr3_2:90687929-90687948 | Msa0436840:three_prime_UTR | 20.0% |
| !! | ATACTACACATCAAAAAATA+GGG | - | chr3_2:90688035-90688054 | None:intergenic | 20.0% |
| !! | TATACTACACATCAAAAAAT+AGG | - | chr3_2:90688036-90688055 | None:intergenic | 20.0% |
| !!! | TTTGAAACTATTTGTTGAAT+CGG | + | chr3_2:90688069-90688088 | Msa0436840:three_prime_UTR | 20.0% |
| ! | GAATGAATGTGTTTGAAAAT+TGG | - | chr3_2:90682931-90682950 | None:intergenic | 25.0% |
| !! | TTGTTGTTAATTGAGAAGAA+AGG | - | chr3_2:90682967-90682986 | None:intergenic | 25.0% |
| !!! | AATTCATTTTTTTCTTTGCC+GGG | + | chr3_2:90683046-90683065 | Msa0436840:five_prime_UTR | 25.0% |
| !!! | AATTTGTAAAAGCATTGATG+AGG | - | chr3_2:90683238-90683257 | None:intergenic | 25.0% |
| ! | GTTGTTATAGTTGAAAGTTT+AGG | + | chr3_2:90683370-90683389 | Msa0436840:intron | 25.0% |
| !! | AGTTATGTAGTTCAACATTT+TGG | + | chr3_2:90683439-90683458 | Msa0436840:intron | 25.0% |
| ! | TCAATAACGACTTAAACAAT+AGG | - | chr3_2:90684003-90684022 | None:intergenic | 25.0% |
| ! | GATATTTAGTGGTAAACAAA+GGG | - | chr3_2:90684284-90684303 | None:intergenic | 25.0% |
| ! | TGATATTTAGTGGTAAACAA+AGG | - | chr3_2:90684285-90684304 | None:intergenic | 25.0% |
| !! | CTCTTGTTTATGATATTTAG+TGG | - | chr3_2:90684295-90684314 | None:intergenic | 25.0% |
| ! | CACTAAATATCATAAACAAG+AGG | + | chr3_2:90684293-90684312 | Msa0436840:intron | 25.0% |
| ! | TTAGTAGTGAAAAACTAAAG+GGG | - | chr3_2:90684395-90684414 | None:intergenic | 25.0% |
| ! | ATTATTAATCAAATCCTGGA+AGG | - | chr3_2:90684464-90684483 | None:intergenic | 25.0% |
| ! | AAAATATTCTATATAGAGCG+GGG | - | chr3_2:90684537-90684556 | None:intergenic | 25.0% |
| !! | CGCTCTATATAGAATATTTT+AGG | + | chr3_2:90684537-90684556 | Msa0436840:intron | 25.0% |
| !! | TTGACTACACATTTTATAGA+CGG | + | chr3_2:90684616-90684635 | Msa0436840:intron | 25.0% |
| !! | ATGTTTCTATTAATGTCATC+AGG | + | chr3_2:90684760-90684779 | Msa0436840:intron | 25.0% |
| ! | ACATGACCAAGAAAAAAAAA+GGG | - | chr3_2:90684892-90684911 | None:intergenic | 25.0% |
| ! | AACATGACCAAGAAAAAAAA+AGG | - | chr3_2:90684893-90684912 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTGGTCATGT+TGG | + | chr3_2:90684892-90684911 | Msa0436840:intron | 25.0% |
| !! | GAGACTAAATTTTGCTTTAT+TGG | - | chr3_2:90685430-90685449 | None:intergenic | 25.0% |
| !! | AAAACTTGAACTTTTTGACA+TGG | + | chr3_2:90685550-90685569 | Msa0436840:CDS | 25.0% |
| !! | AAACTTGAACTTTTTGACAT+GGG | + | chr3_2:90685551-90685570 | Msa0436840:CDS | 25.0% |
| ! | TGAATGCAATATCAAAACTT+GGG | - | chr3_2:90685909-90685928 | None:intergenic | 25.0% |
| !!! | TCATGTTGTTTTGGATTTTT+GGG | - | chr3_2:90685993-90686012 | None:intergenic | 25.0% |
| !!! | ATGATTTTCTCATGTTGTTT+TGG | - | chr3_2:90686002-90686021 | None:intergenic | 25.0% |
| ! | ATTCTACAACAGAAATATAG+TGG | - | chr3_2:90686554-90686573 | None:intergenic | 25.0% |
| ! | CAGGGTTAAAATAAGATAAA+TGG | - | chr3_2:90686862-90686881 | None:intergenic | 25.0% |
| ! | CAATTCAAATCAAACTTACT+TGG | - | chr3_2:90686949-90686968 | None:intergenic | 25.0% |
| ! | AATCAAGCTCATTAACAATA+CGG | - | chr3_2:90687058-90687077 | None:intergenic | 25.0% |
| ! | ACATTATTCTACTTGAGAAA+AGG | + | chr3_2:90687428-90687447 | Msa0436840:intron | 25.0% |
| ! | TCTTATCAATCGAATATTAG+AGG | + | chr3_2:90687770-90687789 | Msa0436840:three_prime_UTR | 25.0% |
| ! | TACTACACATCAAAAAATAG+GGG | - | chr3_2:90688034-90688053 | None:intergenic | 25.0% |
| !! | TTGAAACTATTTGTTGAATC+GGG | + | chr3_2:90688070-90688089 | Msa0436840:three_prime_UTR | 25.0% |
| ATCAACAACAACAACAACTT+AGG | + | chr3_2:90683011-90683030 | Msa0436840:five_prime_UTR | 30.0% | |
| TCAACAACAACAACAACTTA+GGG | + | chr3_2:90683012-90683031 | Msa0436840:five_prime_UTR | 30.0% | |
| !! | GACGAAAATTTGATTTGAGA+GGG | - | chr3_2:90683321-90683340 | None:intergenic | 30.0% |
| !! | TGACGAAAATTTGATTTGAG+AGG | - | chr3_2:90683322-90683341 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGGTATAATA+GGG | - | chr3_2:90683723-90683742 | None:intergenic | 30.0% |
| !! | ACACAAAGTGTTGGTATAAT+AGG | - | chr3_2:90683724-90683743 | None:intergenic | 30.0% |
| AAGAAAGTAACACAAAGTGT+TGG | - | chr3_2:90683733-90683752 | None:intergenic | 30.0% | |
| !! | ACTTTGTGTTACTTTCTTGT+GGG | + | chr3_2:90683735-90683754 | Msa0436840:intron | 30.0% |
| TTATCAATTAGTACTAACGC+TGG | - | chr3_2:90683802-90683821 | None:intergenic | 30.0% | |
| AAGTCGTTATTGATACATGT+TGG | + | chr3_2:90684010-90684029 | Msa0436840:intron | 30.0% | |
| ATAATGTGGGAAACAACAAA+AGG | + | chr3_2:90684482-90684501 | Msa0436840:intron | 30.0% | |
| TAATGTGGGAAACAACAAAA+GGG | + | chr3_2:90684483-90684502 | Msa0436840:intron | 30.0% | |
| ! | TGACTACACATTTTATAGAC+GGG | + | chr3_2:90684617-90684636 | Msa0436840:intron | 30.0% |
| GATCGTGAAATTAAAGATGA+AGG | + | chr3_2:90684798-90684817 | Msa0436840:CDS | 30.0% | |
| !!! | TCAGAACCCTTTTTTTTTCT+TGG | + | chr3_2:90684883-90684902 | Msa0436840:intron | 30.0% |
| ! | ATGGTGATCACTTAATTTGA+TGG | - | chr3_2:90685042-90685061 | None:intergenic | 30.0% |
| CAAATTAAGTGATCACCATA+TGG | + | chr3_2:90685043-90685062 | Msa0436840:intron | 30.0% | |
| !!! | CAAACTTTTTTCTGACCATA+TGG | - | chr3_2:90685061-90685080 | None:intergenic | 30.0% |
| GAAAAAAGTTTGAGAATACG+AGG | + | chr3_2:90685069-90685088 | Msa0436840:intron | 30.0% | |
| !! | TTCATTTTTCTTGCAGATCA+AGG | + | chr3_2:90685225-90685244 | Msa0436840:intron | 30.0% |
| !! | TATTCTTTTGGCTAGTTGAA+AGG | + | chr3_2:90685471-90685490 | Msa0436840:intron | 30.0% |
| TTATCACTTGGATGATAAAC+AGG | + | chr3_2:90685504-90685523 | Msa0436840:intron | 30.0% | |
| ACCGCCAAATATTCATATAA+GGG | + | chr3_2:90685637-90685656 | Msa0436840:intron | 30.0% | |
| AAATATTCGGCCAGAATATT+CGG | + | chr3_2:90685752-90685771 | Msa0436840:intron | 30.0% | |
| TTTAGTATCTGATTAGGTCA+TGG | - | chr3_2:90685886-90685905 | None:intergenic | 30.0% | |
| GTGAATGCAATATCAAAACT+TGG | - | chr3_2:90685910-90685929 | None:intergenic | 30.0% | |
| !!! | CATGTTGTTTTGGATTTTTG+GGG | - | chr3_2:90685992-90686011 | None:intergenic | 30.0% |
| !!! | CTCATGTTGTTTTGGATTTT+TGG | - | chr3_2:90685994-90686013 | None:intergenic | 30.0% |
| GACGAAATTCTTATTCTCAA+AGG | + | chr3_2:90686098-90686117 | Msa0436840:intron | 30.0% | |
| ! | AATACATTTTCTCAAGCCAA+TGG | + | chr3_2:90686475-90686494 | Msa0436840:intron | 30.0% |
| ATGTCAACTACAAATTCCAT+TGG | - | chr3_2:90686494-90686513 | None:intergenic | 30.0% | |
| TATTTGCAATAGCATACTTC+AGG | + | chr3_2:90686598-90686617 | Msa0436840:intron | 30.0% | |
| ! | TCTTGATTTGACATTTCTGT+AGG | - | chr3_2:90686737-90686756 | None:intergenic | 30.0% |
| ! | TTTTAACCCTGTCAAAATGT+AGG | + | chr3_2:90686871-90686890 | Msa0436840:intron | 30.0% |
| GTACATCAAACAATTGAAGT+TGG | + | chr3_2:90686896-90686915 | Msa0436840:CDS | 30.0% | |
| GAATTGAGTATGCTATAAGA+AGG | + | chr3_2:90686963-90686982 | Msa0436840:intron | 30.0% | |
| ATCCCAACAACAAAGATATT+AGG | + | chr3_2:90687617-90687636 | Msa0436840:CDS | 30.0% | |
| TCCCAACAACAAAGATATTA+GGG | + | chr3_2:90687618-90687637 | Msa0436840:CDS | 30.0% | |
| !! | TCCCTAATATCTTTGTTGTT+GGG | - | chr3_2:90687622-90687641 | None:intergenic | 30.0% |
| ! | ATCCCTAATATCTTTGTTGT+TGG | - | chr3_2:90687623-90687642 | None:intergenic | 30.0% |
| AAAGATATTAGGGATATTCC+AGG | + | chr3_2:90687628-90687647 | Msa0436840:CDS | 30.0% | |
| AATATTAGAGGATTGCTTTC+TGG | + | chr3_2:90687782-90687801 | Msa0436840:three_prime_UTR | 30.0% | |
| CTACTTGTACTTGAAATTTG+TGG | + | chr3_2:90687971-90687990 | Msa0436840:three_prime_UTR | 30.0% | |
| TGTAAATGTGTCTAATTCAG+AGG | + | chr3_2:90687994-90688013 | Msa0436840:three_prime_UTR | 30.0% | |
| TTATTATGTGCAAGAGATCG+TGG | + | chr3_2:90683272-90683291 | Msa0436840:intron | 35.0% | |
| ! | ATCGTGGTTTTTGTTGACAT+TGG | + | chr3_2:90683288-90683307 | Msa0436840:intron | 35.0% |
| ACCATGAACATGTATATCAG+TGG | - | chr3_2:90683467-90683486 | None:intergenic | 35.0% | |
| ACACTTACAATATGTCAACC+TGG | - | chr3_2:90683515-90683534 | None:intergenic | 35.0% | |
| GGTTGACATATTGTAAGTGT+AGG | + | chr3_2:90683515-90683534 | Msa0436840:intron | 35.0% | |
| !! | CACTTTGTGTTACTTTCTTG+TGG | + | chr3_2:90683734-90683753 | Msa0436840:intron | 35.0% |
| TTGATAAGCATCCAAGTACT+TGG | + | chr3_2:90683815-90683834 | Msa0436840:intron | 35.0% | |
| TGATAAGCATCCAAGTACTT+GGG | + | chr3_2:90683816-90683835 | Msa0436840:intron | 35.0% | |
| AATTAAGAAGTGATAGGGCA+TGG | - | chr3_2:90683918-90683937 | None:intergenic | 35.0% | |
| TATTGATACATGTTGGAGTG+TGG | + | chr3_2:90684017-90684036 | Msa0436840:intron | 35.0% | |
| !! | GCACTTTTTGCATACAGAAA+TGG | + | chr3_2:90684090-90684109 | Msa0436840:intron | 35.0% |
| CTTTAATCTTATCCAGCTTC+TGG | - | chr3_2:90684119-90684138 | None:intergenic | 35.0% | |
| !! | GTAAACAAAGGGTGTTTGTT+TGG | - | chr3_2:90684273-90684292 | None:intergenic | 35.0% |
| CAATAACGTCTCTAACCATT+GGG | - | chr3_2:90684327-90684346 | None:intergenic | 35.0% | |
| ACAATAACGTCTCTAACCAT+TGG | - | chr3_2:90684328-90684347 | None:intergenic | 35.0% | |
| TTAATCAAATCCTGGAAGGT+TGG | - | chr3_2:90684460-90684479 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTGGGTTATCGTAC+TGG | + | chr3_2:90684577-90684596 | Msa0436840:intron | 35.0% |
| ! | GAAATTAAAGATGAAGGTGC+AGG | + | chr3_2:90684804-90684823 | Msa0436840:CDS | 35.0% |
| CAATGACGAAAAGCAATCAA+TGG | + | chr3_2:90684854-90684873 | Msa0436840:CDS | 35.0% | |
| !!! | TACCTCGTCAAAGTTTTGAA+AGG | + | chr3_2:90684927-90684946 | Msa0436840:intron | 35.0% |
| !!! | ACCTCGTCAAAGTTTTGAAA+GGG | + | chr3_2:90684928-90684947 | Msa0436840:intron | 35.0% |
| AAAGTTTGAGAATACGAGGA+TGG | + | chr3_2:90685073-90685092 | Msa0436840:intron | 35.0% | |
| AACAGGTACATGAATACGAT+TGG | + | chr3_2:90685521-90685540 | Msa0436840:intron | 35.0% | |
| TGCCAATTGAACATTTCCTT+CGG | - | chr3_2:90685600-90685619 | None:intergenic | 35.0% | |
| GACCGCCAAATATTCATATA+AGG | + | chr3_2:90685636-90685655 | Msa0436840:intron | 35.0% | |
| GCCCTTATATGAATATTTGG+CGG | - | chr3_2:90685641-90685660 | None:intergenic | 35.0% | |
| GAATATTCTGGCCGAATATT+TGG | - | chr3_2:90685753-90685772 | None:intergenic | 35.0% | |
| CTTGGGTTTAGTATCTGATT+AGG | - | chr3_2:90685892-90685911 | None:intergenic | 35.0% | |
| ! | ATTTTCATCCCAAAATCCCA+CGG | - | chr3_2:90685954-90685973 | None:intergenic | 35.0% |
| ATTTGATGTTTGCTCCTTTG+AGG | - | chr3_2:90686051-90686070 | None:intergenic | 35.0% | |
| TACAAGAATCTTCACTCTGA+AGG | + | chr3_2:90686076-90686095 | Msa0436840:intron | 35.0% | |
| TCATGAAAGGAGTTGCAAAA+AGG | - | chr3_2:90686175-90686194 | None:intergenic | 35.0% | |
| CACACTAAGCAAATCATGAA+AGG | - | chr3_2:90686188-90686207 | None:intergenic | 35.0% | |
| AAACCCAGACAAAATCTAAG+AGG | + | chr3_2:90686208-90686227 | Msa0436840:intron | 35.0% | |
| ! | AAGCCTCTTAGATTTTGTCT+GGG | - | chr3_2:90686214-90686233 | None:intergenic | 35.0% |
| ! | AAAGCCTCTTAGATTTTGTC+TGG | - | chr3_2:90686215-90686234 | None:intergenic | 35.0% |
| ! | AAATCTAAGAGGCTTTTGTG+TGG | + | chr3_2:90686219-90686238 | Msa0436840:intron | 35.0% |
| ! | AATCTAAGAGGCTTTTGTGT+GGG | + | chr3_2:90686220-90686239 | Msa0436840:intron | 35.0% |
| GACGAAATCCTAATTCACAA+AGG | - | chr3_2:90686337-90686356 | None:intergenic | 35.0% | |
| AGTTTGATGTTTGCTTCTTG+AGG | + | chr3_2:90686378-90686397 | Msa0436840:intron | 35.0% | |
| AAACCACACAAAAATAGCCT+AGG | - | chr3_2:90686662-90686681 | None:intergenic | 35.0% | |
| AATCAAGAACTTGTCAATGC+TGG | + | chr3_2:90686749-90686768 | Msa0436840:CDS | 35.0% | |
| ATCAAGAACTTGTCAATGCT+GGG | + | chr3_2:90686750-90686769 | Msa0436840:CDS | 35.0% | |
| !! | GTACAACCTACATTTTGACA+GGG | - | chr3_2:90686880-90686899 | None:intergenic | 35.0% |
| !! | TGTACAACCTACATTTTGAC+AGG | - | chr3_2:90686881-90686900 | None:intergenic | 35.0% |
| CTATAAGAAGGAAAGAGTCT+AGG | + | chr3_2:90686975-90686994 | Msa0436840:intron | 35.0% | |
| AATCATGCAGACTGAACAAA+TGG | + | chr3_2:90687031-90687050 | Msa0436840:intron | 35.0% | |
| ATCATGCAGACTGAACAAAT+GGG | + | chr3_2:90687032-90687051 | Msa0436840:intron | 35.0% | |
| ACCAATCTCCTTAACAAGTT+GGG | - | chr3_2:90687108-90687127 | None:intergenic | 35.0% | |
| TACCAATCTCCTTAACAAGT+TGG | - | chr3_2:90687109-90687128 | None:intergenic | 35.0% | |
| TACAGCAGTCCATATAAACA+AGG | - | chr3_2:90687150-90687169 | None:intergenic | 35.0% | |
| TATTTCTTCCAAACCTGTCA+TGG | + | chr3_2:90687168-90687187 | Msa0436840:intron | 35.0% | |
| ! | TTTCTGTTTCTTATCGTCTG+TGG | + | chr3_2:90687247-90687266 | Msa0436840:CDS | 35.0% |
| TCATACCTTCACGACAATAA+TGG | - | chr3_2:90687281-90687300 | None:intergenic | 35.0% | |
| TGTGCACATAAACATGCAAT+AGG | - | chr3_2:90687502-90687521 | None:intergenic | 35.0% | |
| TATTAGGGATATTCCAGGAT+TGG | + | chr3_2:90687633-90687652 | Msa0436840:CDS | 35.0% | |
| GATAAGAACAAGAACCAAGT+TGG | - | chr3_2:90687757-90687776 | None:intergenic | 35.0% | |
| GATTGTTACATTAAGAGACG+TGG | - | chr3_2:90687919-90687938 | None:intergenic | 35.0% | |
| TCTCTCTAGCCCTAAATATT+TGG | - | chr3_2:90687941-90687960 | None:intergenic | 35.0% | |
| ACACATCAAAAAATAGGGGA+GGG | - | chr3_2:90688030-90688049 | None:intergenic | 35.0% | |
| TACACATCAAAAAATAGGGG+AGG | - | chr3_2:90688031-90688050 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGATGAGAG+AGG | - | chr3_2:90683006-90683025 | None:intergenic | 40.0% |
| ! | TTTTCTTTGCCGGGATTTTG+AGG | + | chr3_2:90683055-90683074 | Msa0436840:five_prime_UTR | 40.0% |
| ! | TTTCTTTGCCGGGATTTTGA+GGG | + | chr3_2:90683056-90683075 | Msa0436840:five_prime_UTR | 40.0% |
| GAGTTTAACCCTCAAAATCC+CGG | - | chr3_2:90683067-90683086 | None:intergenic | 40.0% | |
| AGATGTCACGAATTTCACCA+TGG | - | chr3_2:90683145-90683164 | None:intergenic | 40.0% | |
| ! | GTGGTTTTTGTTGACATTGG+AGG | + | chr3_2:90683291-90683310 | Msa0436840:intron | 40.0% |
| GCCACTGATATACATGTTCA+TGG | + | chr3_2:90683463-90683482 | Msa0436840:intron | 40.0% | |
| GTGTAGGTAGCTAAGACTAA+TGG | + | chr3_2:90683531-90683550 | Msa0436840:intron | 40.0% | |
| ! | TAAGCAACCACCAAAGTACT+TGG | + | chr3_2:90683608-90683627 | Msa0436840:intron | 40.0% |
| ! | AAGCAACCACCAAAGTACTT+GGG | + | chr3_2:90683609-90683628 | Msa0436840:intron | 40.0% |
| TGTTGGTATAATAGGGACTC+GGG | - | chr3_2:90683716-90683735 | None:intergenic | 40.0% | |
| ! | GTGTTGGTATAATAGGGACT+CGG | - | chr3_2:90683717-90683736 | None:intergenic | 40.0% |
| ! | TTAGTACTAACGCTGGTTGT+CGG | - | chr3_2:90683795-90683814 | None:intergenic | 40.0% |
| GATAAGCATCCAAGTACTTG+GGG | + | chr3_2:90683817-90683836 | Msa0436840:intron | 40.0% | |
| ATCAAGTAGTATGGGATGCT+CGG | - | chr3_2:90683864-90683883 | None:intergenic | 40.0% | |
| CATCCCATACTACTTGATGT+GGG | + | chr3_2:90683866-90683885 | Msa0436840:intron | 40.0% | |
| AGTCCCACATCAAGTAGTAT+GGG | - | chr3_2:90683872-90683891 | None:intergenic | 40.0% | |
| AAGTCCCACATCAAGTAGTA+TGG | - | chr3_2:90683873-90683892 | None:intergenic | 40.0% | |
| CAGCTGAGTACTTTGTCTAT+TGG | - | chr3_2:90684145-90684164 | None:intergenic | 40.0% | |
| ! | CAATAGACAAAGTACTCAGC+TGG | + | chr3_2:90684143-90684162 | Msa0436840:CDS | 40.0% |
| ATCATAAACAAGAGGAGCCT+TGG | + | chr3_2:90684301-90684320 | Msa0436840:intron | 40.0% | |
| AGAGACGTTATTGTGTGACT+AGG | + | chr3_2:90684334-90684353 | Msa0436840:intron | 40.0% | |
| AGTTGCTTGTTCACTTCTTC+GGG | - | chr3_2:90684834-90684853 | None:intergenic | 40.0% | |
| GAGTTGCTTGTTCACTTCTT+CGG | - | chr3_2:90684835-90684854 | None:intergenic | 40.0% | |
| ACCCTTTCAAAACTTTGACG+AGG | - | chr3_2:90684932-90684951 | None:intergenic | 40.0% | |
| TCAAGATCCTCCTTGTATTG+TGG | + | chr3_2:90684952-90684971 | Msa0436840:intron | 40.0% | |
| TGTCAATCCACAATACAAGG+AGG | - | chr3_2:90684962-90684981 | None:intergenic | 40.0% | |
| GAGTGTCAATCCACAATACA+AGG | - | chr3_2:90684965-90684984 | None:intergenic | 40.0% | |
| AACTCGTTACACGCAGAAAA+AGG | - | chr3_2:90684995-90685014 | None:intergenic | 40.0% | |
| CAAGGAGCTAAACTCATATG+TGG | + | chr3_2:90685243-90685262 | Msa0436840:CDS | 40.0% | |
| ACGAGAAATACCAATTCCGT+AGG | + | chr3_2:90685353-90685372 | Msa0436840:intron | 40.0% | |
| AGAAATACCAATTCCGTAGG+AGG | + | chr3_2:90685356-90685375 | Msa0436840:intron | 40.0% | |
| !! | CTTTTGGCTAGTTGAAAGGA+CGG | + | chr3_2:90685475-90685494 | Msa0436840:intron | 40.0% |
| ! | GGACGGTTGATATTATCACT+TGG | + | chr3_2:90685492-90685511 | Msa0436840:intron | 40.0% |
| AGCCGAAGGAAATGTTCAAT+TGG | + | chr3_2:90685595-90685614 | Msa0436840:CDS | 40.0% | |
| GGAAATGTTCAATTGGCATC+AGG | + | chr3_2:90685602-90685621 | Msa0436840:CDS | 40.0% | |
| TTGGCATCAGGTAACATGTT+TGG | + | chr3_2:90685614-90685633 | Msa0436840:intron | 40.0% | |
| CGGGCCCTTATATGAATATT+TGG | - | chr3_2:90685644-90685663 | None:intergenic | 40.0% | |
| AATATTTGGCCTCAAGGTTC+GGG | - | chr3_2:90685739-90685758 | None:intergenic | 40.0% | |
| GAATATTTGGCCTCAAGGTT+CGG | - | chr3_2:90685740-90685759 | None:intergenic | 40.0% | |
| GAACCTTGAGGCCAAATATT+CGG | + | chr3_2:90685739-90685758 | Msa0436840:intron | 40.0% | |
| GGCCAGAATATTCGGATATA+GGG | + | chr3_2:90685760-90685779 | Msa0436840:intron | 40.0% | |
| GCCAGAATATTCGGATATAG+GGG | + | chr3_2:90685761-90685780 | Msa0436840:intron | 40.0% | |
| CCAGAATATTCGGATATAGG+GGG | + | chr3_2:90685762-90685781 | Msa0436840:intron | 40.0% | |
| !!! | GGTGCTATTATAGCCCTTTT+GGG | - | chr3_2:90685845-90685864 | None:intergenic | 40.0% |
| ATCTGATTAGGTCATGGCTT+GGG | - | chr3_2:90685880-90685899 | None:intergenic | 40.0% | |
| TATCTGATTAGGTCATGGCT+TGG | - | chr3_2:90685881-90685900 | None:intergenic | 40.0% | |
| GCATTCACTGCAAGTACATT+TGG | + | chr3_2:90685922-90685941 | Msa0436840:intron | 40.0% | |
| CTAAGAGGCCTTTGTGAATT+AGG | + | chr3_2:90686326-90686345 | Msa0436840:intron | 40.0% | |
| TTTGCTTCTTGAGGAAGAAG+AGG | + | chr3_2:90686387-90686406 | Msa0436840:intron | 40.0% | |
| TTGCTTCTTGAGGAAGAAGA+GGG | + | chr3_2:90686388-90686407 | Msa0436840:intron | 40.0% | |
| ! | TCTTTTCCGTGCATCCTTTT+TGG | + | chr3_2:90686627-90686646 | Msa0436840:intron | 40.0% |
| ! | CTTTTCCGTGCATCCTTTTT+GGG | + | chr3_2:90686628-90686647 | Msa0436840:intron | 40.0% |
| ! | TTTTCCGTGCATCCTTTTTG+GGG | + | chr3_2:90686629-90686648 | Msa0436840:intron | 40.0% |
| CTTCAAGGTAGAAGCAGTTT+GGG | - | chr3_2:90686924-90686943 | None:intergenic | 40.0% | |
| CAAACTGCTTCTACCTTGAA+GGG | + | chr3_2:90686923-90686942 | Msa0436840:CDS | 40.0% | |
| ! | AATCTCCTTAACAAGTTGGG+AGG | - | chr3_2:90687105-90687124 | None:intergenic | 40.0% |
| !! | TCCCAACTTGTTAAGGAGAT+TGG | + | chr3_2:90687104-90687123 | Msa0436840:CDS | 40.0% |
| TGTTAAGGAGATTGGTAGAC+AGG | + | chr3_2:90687112-90687131 | Msa0436840:CDS | 40.0% | |
| ACTTAGTTCCATGACAGGTT+TGG | - | chr3_2:90687179-90687198 | None:intergenic | 40.0% | |
| TCTGTAGCAACCTGATAACA+GGG | - | chr3_2:90687211-90687230 | None:intergenic | 40.0% | |
| GATTGCCATTATTGTCGTGA+AGG | + | chr3_2:90687273-90687292 | Msa0436840:CDS | 40.0% | |
| GCAATCACTATTCACTAGCA+CGG | - | chr3_2:90687480-90687499 | None:intergenic | 40.0% | |
| ATTAGAGGATTGCTTTCTGG+AGG | + | chr3_2:90687785-90687804 | Msa0436840:three_prime_UTR | 40.0% | |
| CACATCAAAAAATAGGGGAG+GGG | - | chr3_2:90688029-90688048 | None:intergenic | 40.0% | |
| ACAGCACGACACAAACACAA+CGG | - | chr3_2:90682852-90682871 | None:intergenic | 45.0% | |
| !! | GATGAGAGAGGAAGCATTAG+TGG | - | chr3_2:90682994-90683013 | None:intergenic | 45.0% |
| !! | CATCTTCAAGTTGGAAGCCA+TGG | - | chr3_2:90683102-90683121 | None:intergenic | 45.0% |
| TGATGAAGATGCATACGCGA+GGG | - | chr3_2:90683174-90683193 | None:intergenic | 45.0% | |
| ATGATGAAGATGCATACGCG+AGG | - | chr3_2:90683175-90683194 | None:intergenic | 45.0% | |
| ! | AGCAACCACCAAAGTACTTG+GGG | + | chr3_2:90683610-90683629 | Msa0436840:intron | 45.0% |
| GTTCTTTCCCCCAAGTACTT+TGG | - | chr3_2:90683621-90683640 | None:intergenic | 45.0% | |
| ! | GAGGGAGTACGTAAGATGTT+TGG | - | chr3_2:90683643-90683662 | None:intergenic | 45.0% |
| AGTCTCACATCGAGTGGTAT+GGG | - | chr3_2:90683672-90683691 | None:intergenic | 45.0% | |
| AAGTCTCACATCGAGTGGTA+TGG | - | chr3_2:90683673-90683692 | None:intergenic | 45.0% | |
| TACCACTCGATGTGAGACTT+AGG | + | chr3_2:90683673-90683692 | Msa0436840:intron | 45.0% | |
| GCATCCCATACTACTTGATG+TGG | + | chr3_2:90683865-90683884 | Msa0436840:intron | 45.0% | |
| AGGGCATGGTTGGGTATTAT+GGG | - | chr3_2:90683904-90683923 | None:intergenic | 45.0% | |
| TAGGGCATGGTTGGGTATTA+TGG | - | chr3_2:90683905-90683924 | None:intergenic | 45.0% | |
| AGAAGTGATAGGGCATGGTT+GGG | - | chr3_2:90683913-90683932 | None:intergenic | 45.0% | |
| AAGAAGTGATAGGGCATGGT+TGG | - | chr3_2:90683914-90683933 | None:intergenic | 45.0% | |
| ! | TAGACAAAGTACTCAGCTGG+AGG | + | chr3_2:90684146-90684165 | Msa0436840:CDS | 45.0% |
| GAAAAACTAAAGGGGCAGCA+GGG | - | chr3_2:90684387-90684406 | None:intergenic | 45.0% | |
| TGAAAAACTAAAGGGGCAGC+AGG | - | chr3_2:90684388-90684407 | None:intergenic | 45.0% | |
| AAAGCTGAACATGCCTCCTA+CGG | - | chr3_2:90685372-90685391 | None:intergenic | 45.0% | |
| ! | GAACTTTTTGACATGGGAGC+TGG | + | chr3_2:90685557-90685576 | Msa0436840:CDS | 45.0% |
| TTTGGGGGGATAAGAAAAGG+GGG | - | chr3_2:90685708-90685727 | None:intergenic | 45.0% | |
| GTTTGGGGGGATAAGAAAAG+GGG | - | chr3_2:90685709-90685728 | None:intergenic | 45.0% | |
| GGTTTGGGGGGATAAGAAAA+GGG | - | chr3_2:90685710-90685729 | None:intergenic | 45.0% | |
| ! | TGGTTTGGGGGGATAAGAAA+AGG | - | chr3_2:90685711-90685730 | None:intergenic | 45.0% |
| ! | AGGTTCGGGATTGATGGTTT+GGG | - | chr3_2:90685725-90685744 | None:intergenic | 45.0% |
| ! | AAGGTTCGGGATTGATGGTT+TGG | - | chr3_2:90685726-90685745 | None:intergenic | 45.0% |
| CGGCCAGAATATTCGGATAT+AGG | + | chr3_2:90685759-90685778 | Msa0436840:intron | 45.0% | |
| CCCCCTATATCCGAATATTC+TGG | - | chr3_2:90685765-90685784 | None:intergenic | 45.0% | |
| ! | TACGCGTTTTACGCTCTGAT+CGG | + | chr3_2:90685788-90685807 | Msa0436840:intron | 45.0% |
| TACGCTCTGATCGGTAACTT+AGG | + | chr3_2:90685797-90685816 | Msa0436840:intron | 45.0% | |
| ACGCTCTGATCGGTAACTTA+GGG | + | chr3_2:90685798-90685817 | Msa0436840:intron | 45.0% | |
| !!! | GGGTGCTATTATAGCCCTTT+TGG | - | chr3_2:90685846-90685865 | None:intergenic | 45.0% |
| AAGGGCTATAATAGCACCCT+TGG | + | chr3_2:90685847-90685866 | Msa0436840:intron | 45.0% | |
| AGGGCTATAATAGCACCCTT+GGG | + | chr3_2:90685848-90685867 | Msa0436840:intron | 45.0% | |
| AACACCCTCTTCTTCCTCAA+AGG | + | chr3_2:90686034-90686053 | Msa0436840:intron | 45.0% | |
| ! | TGCTCCTTTGAGGAAGAAGA+GGG | - | chr3_2:90686041-90686060 | None:intergenic | 45.0% |
| ! | TTGCTCCTTTGAGGAAGAAG+AGG | - | chr3_2:90686042-90686061 | None:intergenic | 45.0% |
| CAATGCTGGGATGAAGACAA+TGG | + | chr3_2:90686763-90686782 | Msa0436840:CDS | 45.0% | |
| CCTTCAAGGTAGAAGCAGTT+TGG | - | chr3_2:90686925-90686944 | None:intergenic | 45.0% | |
| CCAAACTGCTTCTACCTTGA+AGG | + | chr3_2:90686922-90686941 | Msa0436840:CDS | 45.0% | |
| CAAACTTACTTGGCCCTTCA+AGG | - | chr3_2:90686939-90686958 | None:intergenic | 45.0% | |
| GGACAACTTAGTTCCATGAC+AGG | - | chr3_2:90687184-90687203 | None:intergenic | 45.0% | |
| TTGTCCTTACCCCTGTTATC+AGG | + | chr3_2:90687198-90687217 | Msa0436840:intron | 45.0% | |
| CTGTAGCAACCTGATAACAG+GGG | - | chr3_2:90687210-90687229 | None:intergenic | 45.0% | |
| GTCTGTAGCAACCTGATAAC+AGG | - | chr3_2:90687212-90687231 | None:intergenic | 45.0% | |
| ! | TGAGAAAAGGTGCGAGAACT+TGG | + | chr3_2:90687441-90687460 | Msa0436840:intron | 45.0% |
| GTGCGAGAACTTGGATTTCA+TGG | + | chr3_2:90687450-90687469 | Msa0436840:intron | 45.0% | |
| ACGTACAAAAGCCTCCTTGA+GGG | - | chr3_2:90687670-90687689 | None:intergenic | 45.0% | |
| TACGTACAAAAGCCTCCTTG+AGG | - | chr3_2:90687671-90687690 | None:intergenic | 45.0% | |
| ! | CAAGGAGGCTTTTGTACGTA+CGG | + | chr3_2:90687671-90687690 | Msa0436840:CDS | 45.0% |
| CAATTCTAGTCCTGCCAACT+TGG | + | chr3_2:90687740-90687759 | Msa0436840:three_prime_UTR | 45.0% | |
| ! | AGAACAAGAACCAAGTTGGC+AGG | - | chr3_2:90687753-90687772 | None:intergenic | 45.0% |
| CAGAAGTTGGACATGTGCTG+TGG | - | chr3_2:90682825-90682844 | None:intergenic | 50.0% | |
| ACACAACGGAACGCAGAAGT+TGG | - | chr3_2:90682838-90682857 | None:intergenic | 50.0% | |
| AACTCAATCTCCCGCATCCA+TGG | + | chr3_2:90683082-90683101 | Msa0436840:exon | 50.0% | |
| AAGTTGGAAGCCATGGATGC+GGG | - | chr3_2:90683095-90683114 | None:intergenic | 50.0% | |
| ! | CAAGTTGGAAGCCATGGATG+CGG | - | chr3_2:90683096-90683115 | None:intergenic | 50.0% |
| CTGAGGGGTCATCTTCAAGT+TGG | - | chr3_2:90683111-90683130 | None:intergenic | 50.0% | |
| ATGGATCTGTTCGAGCTGAG+GGG | - | chr3_2:90683126-90683145 | None:intergenic | 50.0% | |
| CATGGATCTGTTCGAGCTGA+GGG | - | chr3_2:90683127-90683146 | None:intergenic | 50.0% | |
| CTGGTTGTCACTGCACAACA+AGG | - | chr3_2:90683496-90683515 | None:intergenic | 50.0% | |
| ! | CTTGTTGTGCAGTGACAACC+AGG | + | chr3_2:90683494-90683513 | Msa0436840:intron | 50.0% |
| ! | GCAACCACCAAAGTACTTGG+GGG | + | chr3_2:90683611-90683630 | Msa0436840:intron | 50.0% |
| CTTTCCCCCAAGTACTTTGG+TGG | - | chr3_2:90683618-90683637 | None:intergenic | 50.0% | |
| GAGTGGTATGGGATGCTTGA+GGG | - | chr3_2:90683661-90683680 | None:intergenic | 50.0% | |
| !!! | GTTTTGGAGAAGACCACCGA+CGG | - | chr3_2:90683771-90683790 | None:intergenic | 50.0% |
| !! | AACGCTGGTTGTCGGTGTTT+TGG | - | chr3_2:90683787-90683806 | None:intergenic | 50.0% |
| GGGATTGTTCCCCAAGTACT+TGG | - | chr3_2:90683829-90683848 | None:intergenic | 50.0% | |
| GCATGGTTGGGTATTATGGG+GGG | - | chr3_2:90683901-90683920 | None:intergenic | 50.0% | |
| GGCATGGTTGGGTATTATGG+GGG | - | chr3_2:90683902-90683921 | None:intergenic | 50.0% | |
| GGGCATGGTTGGGTATTATG+GGG | - | chr3_2:90683903-90683922 | None:intergenic | 50.0% | |
| CAGAAATGGCTTCCAGAAGC+TGG | + | chr3_2:90684104-90684123 | Msa0436840:intron | 50.0% | |
| TTTGCAGTCCCTCATCTTCC+CGG | - | chr3_2:90684178-90684197 | None:intergenic | 50.0% | |
| GGAAGATGAGGGACTGCAAA+AGG | + | chr3_2:90684178-90684197 | Msa0436840:CDS | 50.0% | |
| TGGCAAGATTCGACTCAGCA+GGG | - | chr3_2:90684361-90684380 | None:intergenic | 50.0% | |
| ACATCTCATGCCAACCTTCC+AGG | + | chr3_2:90684447-90684466 | Msa0436840:intron | 50.0% | |
| TATAGAGCGGGGTTGCATGT+TGG | - | chr3_2:90684526-90684545 | None:intergenic | 50.0% | |
| GAACATGCCTCCTACGGAAT+TGG | - | chr3_2:90685366-90685385 | None:intergenic | 50.0% | |
| GCAAGTGAATCTACAGCCGA+AGG | + | chr3_2:90685581-90685600 | Msa0436840:CDS | 50.0% | |
| TTGGGGGGATAAGAAAAGGG+GGG | - | chr3_2:90685707-90685726 | None:intergenic | 50.0% | |
| ! | TTCGGGATTGATGGTTTGGG+GGG | - | chr3_2:90685722-90685741 | None:intergenic | 50.0% |
| ! | GTTCGGGATTGATGGTTTGG+GGG | - | chr3_2:90685723-90685742 | None:intergenic | 50.0% |
| ! | GGTTCGGGATTGATGGTTTG+GGG | - | chr3_2:90685724-90685743 | None:intergenic | 50.0% |
| ACCATCAATCCCGAACCTTG+AGG | + | chr3_2:90685727-90685746 | Msa0436840:intron | 50.0% | |
| TGGCCGAATATTTGGCCTCA+AGG | - | chr3_2:90685745-90685764 | None:intergenic | 50.0% | |
| GCGTGGAAGAATGCCCAAAA+GGG | + | chr3_2:90685829-90685848 | Msa0436840:intron | 50.0% | |
| ! | TGGCTTGGGAATGATCCCAA+GGG | - | chr3_2:90685866-90685885 | None:intergenic | 50.0% |
| ! | ATGGCTTGGGAATGATCCCA+AGG | - | chr3_2:90685867-90685886 | None:intergenic | 50.0% |
| TCATCCCAAAATCCCACGGT+GGG | - | chr3_2:90685950-90685969 | None:intergenic | 50.0% | |
| TTCATCCCAAAATCCCACGG+TGG | - | chr3_2:90685951-90685970 | None:intergenic | 50.0% | |
| CAGACCCCAAAAAGGATGCA+CGG | - | chr3_2:90686636-90686655 | None:intergenic | 50.0% | |
| !!! | GTGCATCCTTTTTGGGGTCT+GGG | + | chr3_2:90686635-90686654 | Msa0436840:intron | 50.0% |
| !!! | TGCATCCTTTTTGGGGTCTG+GGG | + | chr3_2:90686636-90686655 | Msa0436840:intron | 50.0% |
| !!! | GGGCCTAGGCTATTTTTGTG+TGG | + | chr3_2:90686656-90686675 | Msa0436840:intron | 50.0% |
| GACAATGGATGAGACTGACC+AGG | + | chr3_2:90686778-90686797 | Msa0436840:CDS | 50.0% | |
| AAATGGTGTGGGCGCAATGA+AGG | - | chr3_2:90686845-90686864 | None:intergenic | 50.0% | |
| !! | GAAGGCCTCCCAACTTGTTA+AGG | + | chr3_2:90687097-90687116 | Msa0436840:CDS | 50.0% |
| GCAACCTGATAACAGGGGTA+AGG | - | chr3_2:90687205-90687224 | None:intergenic | 50.0% | |
| AAAAGCCTCCTTGAGGGAAC+TGG | - | chr3_2:90687664-90687683 | None:intergenic | 50.0% | |
| ! | AGGCTTTTGTACGTACGGAC+TGG | + | chr3_2:90687676-90687695 | Msa0436840:CDS | 50.0% |
| ATTAAGAGACGTGGCACTCG+AGG | - | chr3_2:90687910-90687929 | None:intergenic | 50.0% | |
| CCATGGATCTGTTCGAGCTG+AGG | - | chr3_2:90683128-90683147 | None:intergenic | 55.0% | |
| CCTCAGCTCGAACAGATCCA+TGG | + | chr3_2:90683125-90683144 | Msa0436840:CDS | 55.0% | |
| AAGATGCATACGCGAGGGCA+CGG | - | chr3_2:90683169-90683188 | None:intergenic | 55.0% | |
| CGAGTGGTATGGGATGCTTG+AGG | - | chr3_2:90683662-90683681 | None:intergenic | 55.0% | |
| CGCCTAAGTCTCACATCGAG+TGG | - | chr3_2:90683678-90683697 | None:intergenic | 55.0% | |
| ATGTGAGACTTAGGCGTCCC+AGG | + | chr3_2:90683682-90683701 | Msa0436840:intron | 55.0% | |
| TGTGGGTCAAAACCCTCCGT+CGG | + | chr3_2:90683752-90683771 | Msa0436840:intron | 55.0% | |
| ATGCTCGGCGAAACACTCAG+GGG | - | chr3_2:90683849-90683868 | None:intergenic | 55.0% | |
| GATGCTCGGCGAAACACTCA+GGG | - | chr3_2:90683850-90683869 | None:intergenic | 55.0% | |
| ACTCAGCTGGAGGAACTCAC+CGG | + | chr3_2:90684156-90684175 | Msa0436840:CDS | 55.0% | |
| AGGAACTCACCGGGAAGATG+AGG | + | chr3_2:90684166-90684185 | Msa0436840:CDS | 55.0% | |
| GGAACTCACCGGGAAGATGA+GGG | + | chr3_2:90684167-90684186 | Msa0436840:CDS | 55.0% | |
| CGTCTCTAACCATTGGGCCA+AGG | - | chr3_2:90684321-90684340 | None:intergenic | 55.0% | |
| CTGGCAAGATTCGACTCAGC+AGG | - | chr3_2:90684362-90684381 | None:intergenic | 55.0% | |
| CTGCTGAGTCGAATCTTGCC+AGG | + | chr3_2:90684360-90684379 | Msa0436840:intron | 55.0% | |
| TGCCCTTGCTTAGGGCTAAC+GGG | - | chr3_2:90685663-90685682 | None:intergenic | 55.0% | |
| GTGCCCTTGCTTAGGGCTAA+CGG | - | chr3_2:90685664-90685683 | None:intergenic | 55.0% | |
| GCCTCAAGGTTCGGGATTGA+TGG | - | chr3_2:90685731-90685750 | None:intergenic | 55.0% | |
| AACTTAGGGAGTGAGTCGCG+TGG | + | chr3_2:90685812-90685831 | Msa0436840:intron | 55.0% | |
| CGCGTGGAAGAATGCCCAAA+AGG | + | chr3_2:90685828-90685847 | Msa0436840:intron | 55.0% | |
| !!! | CGTGCATCCTTTTTGGGGTC+TGG | + | chr3_2:90686634-90686653 | Msa0436840:intron | 55.0% |
| AGACTTAGGCGTCCCAGGAC+AGG | + | chr3_2:90683687-90683706 | Msa0436840:intron | 60.0% | |
| TGGAGAAGACCACCGACGGA+GGG | - | chr3_2:90683767-90683786 | None:intergenic | 60.0% | |
| TTGGAGAAGACCACCGACGG+AGG | - | chr3_2:90683768-90683787 | None:intergenic | 60.0% | |
| GGATGCTCGGCGAAACACTC+AGG | - | chr3_2:90683851-90683870 | None:intergenic | 60.0% | |
| CTCAGCTGGAGGAACTCACC+GGG | + | chr3_2:90684157-90684176 | Msa0436840:CDS | 60.0% | |
| CAAGAGGAGCCTTGGCCCAA+TGG | + | chr3_2:90684309-90684328 | Msa0436840:intron | 60.0% | |
| GGCCCGTTAGCCCTAAGCAA+GGG | + | chr3_2:90685658-90685677 | Msa0436840:intron | 60.0% | |
| !! | CATGGGGGTGCCCTTGCTTA+GGG | - | chr3_2:90685671-90685690 | None:intergenic | 60.0% |
| !! | TCATGGGGGTGCCCTTGCTT+AGG | - | chr3_2:90685672-90685691 | None:intergenic | 60.0% |
| ! | AGGGCACCCCCATGACAGAA+TGG | + | chr3_2:90685677-90685696 | Msa0436840:intron | 60.0% |
| GGGCACCCCCATGACAGAAT+GGG | + | chr3_2:90685678-90685697 | Msa0436840:intron | 60.0% | |
| GGCACCCCCATGACAGAATG+GGG | + | chr3_2:90685679-90685698 | Msa0436840:intron | 60.0% | |
| AGTACATTTGGCGCCCACCG+TGG | + | chr3_2:90685934-90685953 | Msa0436840:intron | 60.0% | |
| GTACATTTGGCGCCCACCGT+GGG | + | chr3_2:90685935-90685954 | Msa0436840:intron | 60.0% | |
| CTAGGCCCCAGACCCCAAAA+AGG | - | chr3_2:90686644-90686663 | None:intergenic | 60.0% | |
| !!! | CTTTTTGGGGTCTGGGGCCT+AGG | + | chr3_2:90686642-90686661 | Msa0436840:intron | 60.0% |
| AGCCTCCTTGAGGGAACTGG+AGG | - | chr3_2:90687661-90687680 | None:intergenic | 60.0% | |
| GGACTCGGGCATCCTGTCCT+GGG | - | chr3_2:90683702-90683721 | None:intergenic | 65.0% | |
| GGGTCAAAACCCTCCGTCGG+TGG | + | chr3_2:90683755-90683774 | Msa0436840:intron | 65.0% | |
| CTAAAGGGGCAGCAGGGTCC+TGG | - | chr3_2:90684381-90684400 | None:intergenic | 65.0% | |
| GGGCCCGTTAGCCCTAAGCA+AGG | + | chr3_2:90685657-90685676 | Msa0436840:intron | 65.0% | |
| GGCGCCCCATTCTGTCATGG+GGG | - | chr3_2:90685686-90685705 | None:intergenic | 65.0% | |
| GGGCGCCCCATTCTGTCATG+GGG | - | chr3_2:90685687-90685706 | None:intergenic | 65.0% | |
| ! | GGGGCGCCCCATTCTGTCAT+GGG | - | chr3_2:90685688-90685707 | None:intergenic | 65.0% |
| ! | TGGCGCCCACCGTGGGATTT+TGG | + | chr3_2:90685942-90685961 | Msa0436840:intron | 65.0% |
| ! | GGCGCCCACCGTGGGATTTT+GGG | + | chr3_2:90685943-90685962 | Msa0436840:intron | 65.0% |
| !! | GGAACTGGAGGCGCCAATCC+TGG | - | chr3_2:90687649-90687668 | None:intergenic | 65.0% |
| TGGCGCCTCCAGTTCCCTCA+AGG | + | chr3_2:90687653-90687672 | Msa0436840:CDS | 65.0% | |
| CGCCTCCAGTTCCCTCAAGG+AGG | + | chr3_2:90687656-90687675 | Msa0436840:CDS | 65.0% | |
| GGGACTCGGGCATCCTGTCC+TGG | - | chr3_2:90683703-90683722 | None:intergenic | 70.0% | |
| !! | GGGGGCGCCCCATTCTGTCA+TGG | - | chr3_2:90685689-90685708 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 90682803 | 90688148 | 90682803 | ID=Msa0436840;Name=Msa0436840 |
| chr3_2 | mRNA | 90682803 | 90688148 | 90682803 | ID=Msa0436840-mRNA-1;Parent=Msa0436840;Name=Msa0436840-mRNA-1;_AED=0.13;_eAED=0.13;_QI=275|1|1|1|0.9|0.81|11|434|269 |
| chr3_2 | exon | 90682803 | 90682976 | 90682803 | ID=Msa0436840-mRNA-1:exon:26971;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90683000 | 90683177 | 90683000 | ID=Msa0436840-mRNA-1:exon:26972;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90684107 | 90684199 | 90684107 | ID=Msa0436840-mRNA-1:exon:26973;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90684782 | 90684875 | 90684782 | ID=Msa0436840-mRNA-1:exon:26974;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90685241 | 90685278 | 90685241 | ID=Msa0436840-mRNA-1:exon:26975;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90685526 | 90685623 | 90685526 | ID=Msa0436840-mRNA-1:exon:26976;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90686741 | 90686820 | 90686741 | ID=Msa0436840-mRNA-1:exon:26977;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90686893 | 90686949 | 90686893 | ID=Msa0436840-mRNA-1:exon:26978;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90687041 | 90687133 | 90687041 | ID=Msa0436840-mRNA-1:exon:26979;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90687220 | 90687294 | 90687220 | ID=Msa0436840-mRNA-1:exon:26980;Parent=Msa0436840-mRNA-1 |
| chr3_2 | exon | 90687610 | 90688148 | 90687610 | ID=Msa0436840-mRNA-1:exon:26981;Parent=Msa0436840-mRNA-1 |
| chr3_2 | five_prime_UTR | 90682803 | 90682976 | 90682803 | ID=Msa0436840-mRNA-1:five_prime_utr;Parent=Msa0436840-mRNA-1 |
| chr3_2 | five_prime_UTR | 90683000 | 90683100 | 90683000 | ID=Msa0436840-mRNA-1:five_prime_utr;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90683101 | 90683177 | 90683101 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90684107 | 90684199 | 90684107 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90684782 | 90684875 | 90684782 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90685241 | 90685278 | 90685241 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90685526 | 90685623 | 90685526 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90686741 | 90686820 | 90686741 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90686893 | 90686949 | 90686893 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90687041 | 90687133 | 90687041 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90687220 | 90687294 | 90687220 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | CDS | 90687610 | 90687714 | 90687610 | ID=Msa0436840-mRNA-1:cds;Parent=Msa0436840-mRNA-1 |
| chr3_2 | three_prime_UTR | 90687715 | 90688148 | 90687715 | ID=Msa0436840-mRNA-1:three_prime_utr;Parent=Msa0436840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
