Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1219540 | XP_003609873.1 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1219540 | sp|Q9LRP1|NPS13_ARATH | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.62e-155 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1219540 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0608820 | Msa1219540 | 0.811697 | 6.148755e-51 | -8.615850e-47 |
| Msa0610700 | Msa1219540 | -0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0691610 | Msa1219540 | 0.801151 | 1.030999e-48 | -8.615850e-47 |
| Msa0718360 | Msa1219540 | 0.812047 | 5.158762e-51 | -8.615850e-47 |
| Msa0719270 | Msa1219540 | 0.800018 | 1.754299e-48 | -8.615850e-47 |
| Msa0759430 | Msa1219540 | 0.814422 | 1.553587e-51 | -8.615850e-47 |
| Msa0180100 | Msa1219540 | -0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa0184510 | Msa1219540 | -0.809774 | 1.602298e-50 | -8.615850e-47 |
| Msa0371350 | Msa1219540 | -0.809555 | 1.785391e-50 | -8.615850e-47 |
| Msa0382860 | Msa1219540 | 0.806696 | 7.257353e-50 | -8.615850e-47 |
| Msa0419420 | Msa1219540 | -0.810210 | 1.290671e-50 | -8.615850e-47 |
| Msa0428330 | Msa1219540 | -0.801517 | 8.673914e-49 | -8.615850e-47 |
| Msa0436840 | Msa1219540 | 0.998378 | 2.358168e-263 | -8.615850e-47 |
| Msa0477030 | Msa1219540 | 0.807695 | 4.456986e-50 | -8.615850e-47 |
| Msa1024570 | Msa1219540 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
| Msa1031180 | Msa1219540 | 0.833447 | 5.305012e-56 | -8.615850e-47 |
| Msa1063190 | Msa1219540 | 0.849447 | 3.214898e-60 | -8.615850e-47 |
| Msa1078590 | Msa1219540 | -0.807979 | 3.878498e-50 | -8.615850e-47 |
| Msa1078760 | Msa1219540 | -0.807887 | 4.057159e-50 | -8.615850e-47 |
| Msa0256540 | Msa1219540 | 0.806727 | 7.149715e-50 | -8.615850e-47 |
| Msa0266140 | Msa1219540 | -0.801209 | 1.003243e-48 | -8.615850e-47 |
| Msa0267450 | Msa1219540 | -0.806020 | 1.007584e-49 | -8.615850e-47 |
| Msa0267510 | Msa1219540 | -0.802772 | 4.788209e-49 | -8.615850e-47 |
| Msa0304060 | Msa1219540 | -0.803418 | 3.519974e-49 | -8.615850e-47 |
| Msa1119430 | Msa1219540 | 0.824321 | 8.600093e-54 | -8.615850e-47 |
| Msa1190350 | Msa1219540 | -0.815694 | 8.109185e-52 | -8.615850e-47 |
| Msa1205270 | Msa1219540 | -0.809558 | 1.783608e-50 | -8.615850e-47 |
| Msa1219540 | Msa1236860 | -0.804017 | 2.643822e-49 | -8.615850e-47 |
| Msa1219540 | Msa1243630 | -0.805779 | 1.132009e-49 | -8.615850e-47 |
| Msa1219540 | Msa1244220 | -0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa1219540 | Msa1255030 | -0.803687 | 3.094900e-49 | -8.615850e-47 |
| Msa1219540 | Msa1266120 | -0.801632 | 8.217048e-49 | -8.615850e-47 |
| Msa1219540 | Msa1297220 | -0.820107 | 8.169363e-53 | -8.615850e-47 |
| Msa1219540 | Msa1303820 | -0.809262 | 2.064138e-50 | -8.615850e-47 |
| Msa1219540 | Msa1317240 | -0.801294 | 9.635178e-49 | -8.615850e-47 |
| Msa1219540 | Msa1332690 | -0.802343 | 5.867706e-49 | -8.615850e-47 |
| Msa1219540 | Msa1333210 | 0.970175 | 3.218019e-131 | -8.615850e-47 |
| Msa1219540 | Msa1333240 | 0.842332 | 2.758048e-58 | -8.615850e-47 |
| Msa1219540 | Msa1343450 | -0.826090 | 3.282073e-54 | -8.615850e-47 |
| Msa1219540 | Msa1371300 | 0.803589 | 3.243995e-49 | -8.615850e-47 |
| Msa1219540 | Msa1437510 | 0.830797 | 2.398672e-55 | -8.615850e-47 |
| Msa0887100 | Msa1219540 | -0.810698 | 1.012599e-50 | -8.615850e-47 |
| Msa0913140 | Msa1219540 | -0.811965 | 5.376626e-51 | -8.615850e-47 |
| Msa0931550 | Msa1219540 | -0.800560 | 1.361050e-48 | -8.615850e-47 |
| Msa0950470 | Msa1219540 | -0.804357 | 2.245808e-49 | -8.615850e-47 |
| Msa0950570 | Msa1219540 | -0.804946 | 1.692409e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1219540 | MtrunA17_Chr4g0069271 | 100.000 | 269 | 0 | 0 | 1 | 269 | 1 | 269 | 0.0 | 551 |
| Msa1219540 | MtrunA17_Chr2g0302561 | 88.679 | 265 | 30 | 0 | 1 | 265 | 1 | 265 | 1.33e-167 | 464 |
| Msa1219540 | MtrunA17_Chr4g0055321 | 64.202 | 257 | 87 | 2 | 7 | 261 | 7 | 260 | 5.63e-105 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1219540 | AT3G17440.1 | 84.470 | 264 | 40 | 1 | 1 | 263 | 1 | 264 | 1.65e-156 | 436 |
| Msa1219540 | AT1G48240.1 | 83.333 | 264 | 43 | 1 | 1 | 263 | 1 | 264 | 2.19e-154 | 431 |
| Msa1219540 | AT3G17440.2 | 83.568 | 213 | 34 | 1 | 1 | 212 | 1 | 213 | 9.41e-126 | 357 |
| Msa1219540 | AT1G48240.2 | 84.038 | 213 | 33 | 1 | 52 | 263 | 1 | 213 | 1.89e-122 | 348 |
| Msa1219540 | AT2G35190.1 | 67.954 | 259 | 76 | 3 | 7 | 261 | 7 | 262 | 3.79e-111 | 321 |
Find 92 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTAACAATCCAAATATTT+AGG | 0.090500 | 8_1:+82459735 | Msa1219540:three_prime_UTR |
| TCTCTCTAGCCCTAAATATT+TGG | 0.162380 | 8_1:-82459745 | None:intergenic |
| AATATTAGAGGATTGCTTTC+TGG | 0.171816 | 8_1:+82459589 | Msa1219540:three_prime_UTR |
| GAATGAATGTGTTTGAAAAT+TGG | 0.232521 | 8_1:-82454710 | None:intergenic |
| CTTTAATCTTATCCAGCTTC+TGG | 0.274677 | 8_1:-82455898 | None:intergenic |
| ATCCCAACAACAAAGATATT+AGG | 0.293546 | 8_1:+82459424 | Msa1219540:CDS |
| TGTAACAATCCAAATATTTA+GGG | 0.294643 | 8_1:+82459736 | Msa1219540:three_prime_UTR |
| AGTTGCTTGTTCACTTCTTC+GGG | 0.302974 | 8_1:-82456613 | None:intergenic |
| GAGTTGCTTGTTCACTTCTT+CGG | 0.321882 | 8_1:-82456614 | None:intergenic |
| TTTGCAGTCCCTCATCTTCC+CGG | 0.331240 | 8_1:-82455957 | None:intergenic |
| CAGCTGAGTACTTTGTCTAT+TGG | 0.333441 | 8_1:-82455924 | None:intergenic |
| CCTTCAAGGTAGAAGCAGTT+TGG | 0.343816 | 8_1:-82458729 | None:intergenic |
| TCCCAACAACAAAGATATTA+GGG | 0.359712 | 8_1:+82459425 | Msa1219540:CDS |
| CTTCAAGGTAGAAGCAGTTT+GGG | 0.360070 | 8_1:-82458728 | None:intergenic |
| TTTGAAACTATTTGTTGAAT+CGG | 0.373263 | 8_1:+82459876 | Msa1219540:three_prime_UTR |
| ATCCCTAATATCTTTGTTGT+TGG | 0.373848 | 8_1:-82459427 | None:intergenic |
| CAAACTTACTTGGCCCTTCA+AGG | 0.377735 | 8_1:-82458743 | None:intergenic |
| TCTTATCAATCGAATATTAG+AGG | 0.380556 | 8_1:+82459577 | Msa1219540:three_prime_UTR |
| CCAAACTGCTTCTACCTTGA+AGG | 0.383146 | 8_1:+82458729 | Msa1219540:CDS |
| TCCCTAATATCTTTGTTGTT+GGG | 0.383563 | 8_1:-82459426 | None:intergenic |
| TCCCAACTTGTTAAGGAGAT+TGG | 0.395927 | 8_1:+82458911 | Msa1219540:CDS |
| TCATACCTTCACGACAATAA+TGG | 0.396104 | 8_1:-82459085 | None:intergenic |
| CTACTTGTACTTGAAATTTG+TGG | 0.402605 | 8_1:+82459778 | Msa1219540:three_prime_UTR |
| AAAAGCCTCCTTGAGGGAAC+TGG | 0.407527 | 8_1:-82459468 | None:intergenic |
| GAAGGCCTCCCAACTTGTTA+AGG | 0.410294 | 8_1:+82458904 | Msa1219540:CDS |
| TTGAAACTATTTGTTGAATC+GGG | 0.411278 | 8_1:+82459877 | Msa1219540:three_prime_UTR |
| AAAGATATTAGGGATATTCC+AGG | 0.415143 | 8_1:+82459435 | Msa1219540:CDS |
| CAATTCTAGTCCTGCCAACT+TGG | 0.415915 | 8_1:+82459547 | Msa1219540:three_prime_UTR |
| AATCAAGAACTTGTCAATGC+TGG | 0.416592 | 8_1:+82458556 | Msa1219540:CDS |
| AATCATGCAGACTGAACAAA+TGG | 0.425940 | 8_1:+82458838 | Msa1219540:intron |
| GGAACTGGAGGCGCCAATCC+TGG | 0.433221 | 8_1:-82459453 | None:intergenic |
| TGTTAAGGAGATTGGTAGAC+AGG | 0.437254 | 8_1:+82458919 | Msa1219540:CDS |
| ACCAATCTCCTTAACAAGTT+GGG | 0.449301 | 8_1:-82458912 | None:intergenic |
| CAGAAATGGCTTCCAGAAGC+TGG | 0.449482 | 8_1:+82455886 | Msa1219540:intron |
| TGCCAATTGAACATTTCCTT+CGG | 0.451709 | 8_1:-82457404 | None:intergenic |
| CATGGATCTGTTCGAGCTGA+GGG | 0.453043 | 8_1:-82454906 | None:intergenic |
| AGCCGAAGGAAATGTTCAAT+TGG | 0.469264 | 8_1:+82457402 | Msa1219540:CDS |
| GATCGTGAAATTAAAGATGA+AGG | 0.472497 | 8_1:+82456580 | Msa1219540:CDS |
| GGAAATGTTCAATTGGCATC+AGG | 0.483291 | 8_1:+82457409 | Msa1219540:CDS |
| TACCAATCTCCTTAACAAGT+TGG | 0.487013 | 8_1:-82458913 | None:intergenic |
| TATTAGGGATATTCCAGGAT+TGG | 0.491096 | 8_1:+82459440 | Msa1219540:CDS |
| ATCAAGAACTTGTCAATGCT+GGG | 0.492269 | 8_1:+82458557 | Msa1219540:CDS |
| CAATAGACAAAGTACTCAGC+TGG | 0.497315 | 8_1:+82455925 | Msa1219540:CDS |
| ACACAACGGAACGCAGAAGT+TGG | 0.500757 | 8_1:-82454617 | None:intergenic |
| GTACATCAAACAATTGAAGT+TGG | 0.510767 | 8_1:+82458703 | Msa1219540:CDS |
| AATCAAGCTCATTAACAATA+CGG | 0.513503 | 8_1:-82458862 | None:intergenic |
| GGAAGATGAGGGACTGCAAA+AGG | 0.516525 | 8_1:+82455960 | Msa1219540:CDS |
| CATCTTCAAGTTGGAAGCCA+TGG | 0.518612 | 8_1:-82454881 | None:intergenic |
| AACTCAATCTCCCGCATCCA+TGG | 0.519687 | 8_1:+82454864 | Msa1219540:exon |
| ACTCAGCTGGAGGAACTCAC+CGG | 0.523198 | 8_1:+82455938 | Msa1219540:CDS |
| GAAATTAAAGATGAAGGTGC+AGG | 0.526092 | 8_1:+82456586 | Msa1219540:CDS |
| GGCTATTGAGAGATCTAAGC+AGG | 0.527773 | 8_1:+82458606 | Msa1219540:CDS |
| CTGAGGGGTCATCTTCAAGT+TGG | 0.529082 | 8_1:-82454890 | None:intergenic |
| CCATGGATCTGTTCGAGCTG+AGG | 0.533024 | 8_1:-82454907 | None:intergenic |
| GAGTTTAACCCTCAAAATCC+CGG | 0.534542 | 8_1:-82454846 | None:intergenic |
| GTTGTTGTTGTTGATGAGAG+AGG | 0.538666 | 8_1:-82454785 | None:intergenic |
| TTGTTGTTAATTGAGAAGAA+AGG | 0.541556 | 8_1:-82454746 | None:intergenic |
| ACGTACAAAAGCCTCCTTGA+GGG | 0.543026 | 8_1:-82459474 | None:intergenic |
| CAATGACGAAAAGCAATCAA+TGG | 0.543601 | 8_1:+82456636 | Msa1219540:CDS |
| TTTCTGTTTCTTATCGTCTG+TGG | 0.544072 | 8_1:+82459054 | Msa1219540:CDS |
| CAAGTTGGAAGCCATGGATG+CGG | 0.544349 | 8_1:-82454875 | None:intergenic |
| AAGTTGGAAGCCATGGATGC+GGG | 0.545305 | 8_1:-82454874 | None:intergenic |
| AGAACAAGAACCAAGTTGGC+AGG | 0.550428 | 8_1:-82459557 | None:intergenic |
| AACAGGTACATGAATACGAT+TGG | 0.551437 | 8_1:+82457328 | Msa1219540:intron |
| AAGATGCATACGCGAGGGCA+CGG | 0.552215 | 8_1:-82454948 | None:intergenic |
| GCTTAGATCTCTCAATAGCC+TGG | 0.553529 | 8_1:-82458603 | None:intergenic |
| GATAAGAACAAGAACCAAGT+TGG | 0.555394 | 8_1:-82459561 | None:intergenic |
| CAAACTGCTTCTACCTTGAA+GGG | 0.570444 | 8_1:+82458730 | Msa1219540:CDS |
| AGGAACTCACCGGGAAGATG+AGG | 0.575887 | 8_1:+82455948 | Msa1219540:CDS |
| ATTAGAGGATTGCTTTCTGG+AGG | 0.581140 | 8_1:+82459592 | Msa1219540:three_prime_UTR |
| TGGCGCCTCCAGTTCCCTCA+AGG | 0.584416 | 8_1:+82459460 | Msa1219540:CDS |
| CGCCTCCAGTTCCCTCAAGG+AGG | 0.588015 | 8_1:+82459463 | Msa1219540:CDS |
| ATTAAGAGACGTGGCACTCG+AGG | 0.588508 | 8_1:-82459714 | None:intergenic |
| CAAGGAGCTAAACTCATATG+TGG | 0.596320 | 8_1:+82457050 | Msa1219540:CDS |
| GGAACTCACCGGGAAGATGA+GGG | 0.597027 | 8_1:+82455949 | Msa1219540:CDS |
| AGCCTCCTTGAGGGAACTGG+AGG | 0.604127 | 8_1:-82459465 | None:intergenic |
| CCTCAGCTCGAACAGATCCA+TGG | 0.604752 | 8_1:+82454907 | Msa1219540:CDS |
| CTCAGCTGGAGGAACTCACC+GGG | 0.605565 | 8_1:+82455939 | Msa1219540:CDS |
| TGTAAATGTGTCTAATTCAG+AGG | 0.607175 | 8_1:+82459801 | Msa1219540:three_prime_UTR |
| GATTGCCATTATTGTCGTGA+AGG | 0.622761 | 8_1:+82459080 | Msa1219540:CDS |
| ATCATGCAGACTGAACAAAT+GGG | 0.622906 | 8_1:+82458839 | Msa1219540:intron |
| GCAAGTGAATCTACAGCCGA+AGG | 0.626899 | 8_1:+82457388 | Msa1219540:CDS |
| GACAATGGATGAGACTGACC+AGG | 0.634633 | 8_1:+82458585 | Msa1219540:CDS |
| AATCTCCTTAACAAGTTGGG+AGG | 0.641193 | 8_1:-82458909 | None:intergenic |
| CAGAAGTTGGACATGTGCTG+TGG | 0.658857 | 8_1:-82454604 | None:intergenic |
| CAATGCTGGGATGAAGACAA+TGG | 0.665195 | 8_1:+82458570 | Msa1219540:CDS |
| TAGACAAAGTACTCAGCTGG+AGG | 0.671294 | 8_1:+82455928 | Msa1219540:CDS |
| GATTGTTACATTAAGAGACG+TGG | 0.682955 | 8_1:-82459723 | None:intergenic |
| ACAGCACGACACAAACACAA+CGG | 0.684691 | 8_1:-82454631 | None:intergenic |
| TACGTACAAAAGCCTCCTTG+AGG | 0.702572 | 8_1:-82459475 | None:intergenic |
| ATGGATCTGTTCGAGCTGAG+GGG | 0.705029 | 8_1:-82454905 | None:intergenic |
| AGATGTCACGAATTTCACCA+TGG | 0.723900 | 8_1:-82454924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATAACACAA+TGG | - | chr8_1:82456882-82456901 | None:intergenic | 10.0% |
| !! | AAAACTTCTATTTATATATA+AGG | - | chr8_1:82457259-82457278 | None:intergenic | 10.0% |
| !!! | TTTTCTCATTTTATTTATTT+TGG | + | chr8_1:82458238-82458257 | Msa1219540:intron | 10.0% |
| !!! | TTTCTCATTTTATTTATTTT+GGG | + | chr8_1:82458239-82458258 | Msa1219540:intron | 10.0% |
| !! | GATTTGATTAATAATAATGT+GGG | + | chr8_1:82456251-82456270 | Msa1219540:intron | 15.0% |
| !!! | TAAATTTGATAGTTGTTTTT+TGG | + | chr8_1:82456346-82456365 | Msa1219540:intron | 15.0% |
| !!! | AAATTTGATAGTTGTTTTTT+GGG | + | chr8_1:82456347-82456366 | Msa1219540:intron | 15.0% |
| !!! | AAATAGAAGTTTTATTCTTT+TGG | + | chr8_1:82457266-82457285 | Msa1219540:intron | 15.0% |
| !! | ATAAAATTATTAGAGCAAAT+TGG | - | chr8_1:82459170-82459189 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAATAACTT+TGG | + | chr8_1:82459208-82459227 | Msa1219540:intron | 15.0% |
| !!! | GCAAAGAAAAAAATGAATTT+TGG | - | chr8_1:82454827-82454846 | None:intergenic | 20.0% |
| !!! | AAATTCATTTTTTTCTTTGC+CGG | + | chr8_1:82454827-82454846 | Msa1219540:five_prime_UTR | 20.0% |
| !! | GATATATAAATCAACAAAGT+TGG | + | chr8_1:82455183-82455202 | Msa1219540:intron | 20.0% |
| !!! | GTTTTAATTAAGAAGTGATA+GGG | - | chr8_1:82455705-82455724 | None:intergenic | 20.0% |
| !!! | TGTTTTAATTAAGAAGTGAT+AGG | - | chr8_1:82455706-82455725 | None:intergenic | 20.0% |
| !! | TAAGAACTTATATGCTTATA+AGG | - | chr8_1:82455757-82455776 | None:intergenic | 20.0% |
| !! | TTTAGTAGTGAAAAACTAAA+GGG | - | chr8_1:82456178-82456197 | None:intergenic | 20.0% |
| !! | ATTTAGTAGTGAAAAACTAA+AGG | - | chr8_1:82456179-82456198 | None:intergenic | 20.0% |
| !! | CATAAACAAAACTTCTATAA+TGG | + | chr8_1:82456201-82456220 | Msa1219540:intron | 20.0% |
| !! | CATTATTATTAATCAAATCC+TGG | - | chr8_1:82456250-82456269 | None:intergenic | 20.0% |
| !! | GGATTTGATTAATAATAATG+TGG | + | chr8_1:82456250-82456269 | Msa1219540:intron | 20.0% |
| !! | TAAAATATTCTATATAGAGC+GGG | - | chr8_1:82456320-82456339 | None:intergenic | 20.0% |
| !! | CTAAAATATTCTATATAGAG+CGG | - | chr8_1:82456321-82456340 | None:intergenic | 20.0% |
| !!! | ATTTTTTCAAACATCAATGT+TGG | + | chr8_1:82456427-82456446 | Msa1219540:intron | 20.0% |
| !!! | TACATTTCATGATTTCTTTT+TGG | + | chr8_1:82456485-82456504 | Msa1219540:intron | 20.0% |
| !!! | TTCTTTTTGGAATTTGTTAA+TGG | + | chr8_1:82456498-82456517 | Msa1219540:intron | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | - | chr8_1:82458118-82458137 | None:intergenic | 20.0% |
| !!! | CTTAGATTTGAAATTCAAAA+CGG | + | chr8_1:82457931-82457950 | Msa1219540:intron | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+GGG | + | chr8_1:82457932-82457951 | Msa1219540:intron | 20.0% |
| !! | TCCTTAAAAGAGTTATAAAA+AGG | + | chr8_1:82458066-82458085 | Msa1219540:intron | 20.0% |
| !!! | TCCTTTTTATAACTCTTTTA+AGG | - | chr8_1:82458070-82458089 | None:intergenic | 20.0% |
| !!! | TTAGATTTGAAATTCAAAAC+AGG | - | chr8_1:82457932-82457951 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTCAAATCTAAG+AGG | + | chr8_1:82458118-82458137 | Msa1219540:intron | 20.0% |
| !! | TAAAATAAGATAAATGGTGT+GGG | - | chr8_1:82458663-82458682 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATAAATGGTG+TGG | - | chr8_1:82458664-82458683 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCAATAAAGA+AGG | + | chr8_1:82458886-82458905 | Msa1219540:CDS | 20.0% |
| !!! | CTTTAATTTCCTTGTTTATA+TGG | + | chr8_1:82458945-82458964 | Msa1219540:intron | 20.0% |
| !! | AGAGAATATATCAACAAATT+AGG | - | chr8_1:82459134-82459153 | None:intergenic | 20.0% |
| !! | TGAAAAAAGAAAGAATTAAC+TGG | - | chr8_1:82459634-82459653 | None:intergenic | 20.0% |
| !! | ATGTAACAATCCAAATATTT+AGG | + | chr8_1:82459735-82459754 | Msa1219540:three_prime_UTR | 20.0% |
| !! | TGTAACAATCCAAATATTTA+GGG | + | chr8_1:82459736-82459755 | Msa1219540:three_prime_UTR | 20.0% |
| !! | ATACTACACATCAAAAAATA+GGG | - | chr8_1:82459842-82459861 | None:intergenic | 20.0% |
| !! | TATACTACACATCAAAAAAT+AGG | - | chr8_1:82459843-82459862 | None:intergenic | 20.0% |
| !!! | TTTGAAACTATTTGTTGAAT+CGG | + | chr8_1:82459876-82459895 | Msa1219540:three_prime_UTR | 20.0% |
| ! | GAATGAATGTGTTTGAAAAT+TGG | - | chr8_1:82454713-82454732 | None:intergenic | 25.0% |
| !! | TTGTTGTTAATTGAGAAGAA+AGG | - | chr8_1:82454749-82454768 | None:intergenic | 25.0% |
| !!! | AATTCATTTTTTTCTTTGCC+GGG | + | chr8_1:82454828-82454847 | Msa1219540:five_prime_UTR | 25.0% |
| !!! | AATTTGTAAAAGCATTGATG+AGG | - | chr8_1:82455020-82455039 | None:intergenic | 25.0% |
| ! | GTTGTTATAGTTGAAAGTTT+AGG | + | chr8_1:82455152-82455171 | Msa1219540:intron | 25.0% |
| !! | AGTTATGTAGTTCAACATTT+TGG | + | chr8_1:82455221-82455240 | Msa1219540:intron | 25.0% |
| ! | TCAATAACGACTTAAACAAT+AGG | - | chr8_1:82455785-82455804 | None:intergenic | 25.0% |
| ! | GATATTTAGTGGTAAACAAA+GGG | - | chr8_1:82456066-82456085 | None:intergenic | 25.0% |
| ! | TGATATTTAGTGGTAAACAA+AGG | - | chr8_1:82456067-82456086 | None:intergenic | 25.0% |
| !! | CTCTTGTTTATGATATTTAG+TGG | - | chr8_1:82456077-82456096 | None:intergenic | 25.0% |
| ! | CACTAAATATCATAAACAAG+AGG | + | chr8_1:82456075-82456094 | Msa1219540:intron | 25.0% |
| ! | TTAGTAGTGAAAAACTAAAG+GGG | - | chr8_1:82456177-82456196 | None:intergenic | 25.0% |
| ! | ATTATTAATCAAATCCTGGA+AGG | - | chr8_1:82456246-82456265 | None:intergenic | 25.0% |
| ! | AAAATATTCTATATAGAGCG+GGG | - | chr8_1:82456319-82456338 | None:intergenic | 25.0% |
| !! | CGCTCTATATAGAATATTTT+AGG | + | chr8_1:82456319-82456338 | Msa1219540:intron | 25.0% |
| !! | TTGACTACACATTTTATAGA+CGG | + | chr8_1:82456398-82456417 | Msa1219540:intron | 25.0% |
| !! | ATGTTTCTATTAATGTCATC+AGG | + | chr8_1:82456542-82456561 | Msa1219540:intron | 25.0% |
| ! | ACATGACCAAGAAAAAAAAA+GGG | - | chr8_1:82456674-82456693 | None:intergenic | 25.0% |
| ! | AACATGACCAAGAAAAAAAA+AGG | - | chr8_1:82456675-82456694 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTGGTCATGT+TGG | + | chr8_1:82456674-82456693 | Msa1219540:intron | 25.0% |
| !! | GAGACTAAATTTTGCTTTAT+TGG | - | chr8_1:82457237-82457256 | None:intergenic | 25.0% |
| !! | AAAACTTGAACTTTTTGACA+TGG | + | chr8_1:82457357-82457376 | Msa1219540:CDS | 25.0% |
| !! | AAACTTGAACTTTTTGACAT+GGG | + | chr8_1:82457358-82457377 | Msa1219540:CDS | 25.0% |
| ! | TGAATGCAATATCAAAACTT+GGG | - | chr8_1:82457716-82457735 | None:intergenic | 25.0% |
| !!! | TCATGTTGTTTTGGATTTTT+GGG | - | chr8_1:82457800-82457819 | None:intergenic | 25.0% |
| !!! | ATGATTTTCTCATGTTGTTT+TGG | - | chr8_1:82457809-82457828 | None:intergenic | 25.0% |
| ! | ATTCTACAACAGAAATATAG+TGG | - | chr8_1:82458361-82458380 | None:intergenic | 25.0% |
| ! | CAGGGTTAAAATAAGATAAA+TGG | - | chr8_1:82458669-82458688 | None:intergenic | 25.0% |
| ! | CAATTCAAATCAAACTTACT+TGG | - | chr8_1:82458756-82458775 | None:intergenic | 25.0% |
| ! | AATCAAGCTCATTAACAATA+CGG | - | chr8_1:82458865-82458884 | None:intergenic | 25.0% |
| ! | ACATTATTCTACTTGAGAAA+AGG | + | chr8_1:82459235-82459254 | Msa1219540:intron | 25.0% |
| ! | TCTTATCAATCGAATATTAG+AGG | + | chr8_1:82459577-82459596 | Msa1219540:three_prime_UTR | 25.0% |
| ! | TACTACACATCAAAAAATAG+GGG | - | chr8_1:82459841-82459860 | None:intergenic | 25.0% |
| !! | TTGAAACTATTTGTTGAATC+GGG | + | chr8_1:82459877-82459896 | Msa1219540:three_prime_UTR | 25.0% |
| ATCAACAACAACAACAACTT+AGG | + | chr8_1:82454793-82454812 | Msa1219540:five_prime_UTR | 30.0% | |
| TCAACAACAACAACAACTTA+GGG | + | chr8_1:82454794-82454813 | Msa1219540:five_prime_UTR | 30.0% | |
| !! | GACGAAAATTTGATTTGAGA+GGG | - | chr8_1:82455103-82455122 | None:intergenic | 30.0% |
| !! | TGACGAAAATTTGATTTGAG+AGG | - | chr8_1:82455104-82455123 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGGTATAATA+GGG | - | chr8_1:82455505-82455524 | None:intergenic | 30.0% |
| !! | ACACAAAGTGTTGGTATAAT+AGG | - | chr8_1:82455506-82455525 | None:intergenic | 30.0% |
| AAGAAAGTAACACAAAGTGT+TGG | - | chr8_1:82455515-82455534 | None:intergenic | 30.0% | |
| !! | ACTTTGTGTTACTTTCTTGT+GGG | + | chr8_1:82455517-82455536 | Msa1219540:intron | 30.0% |
| TTATCAATTAGTACTAACGC+TGG | - | chr8_1:82455584-82455603 | None:intergenic | 30.0% | |
| AAGTCGTTATTGATACATGT+TGG | + | chr8_1:82455792-82455811 | Msa1219540:intron | 30.0% | |
| ATAATGTGGGAAACAACAAA+AGG | + | chr8_1:82456264-82456283 | Msa1219540:intron | 30.0% | |
| TAATGTGGGAAACAACAAAA+GGG | + | chr8_1:82456265-82456284 | Msa1219540:intron | 30.0% | |
| ! | TGACTACACATTTTATAGAC+GGG | + | chr8_1:82456399-82456418 | Msa1219540:intron | 30.0% |
| GATCGTGAAATTAAAGATGA+AGG | + | chr8_1:82456580-82456599 | Msa1219540:CDS | 30.0% | |
| !!! | TCAGAACCCTTTTTTTTTCT+TGG | + | chr8_1:82456665-82456684 | Msa1219540:intron | 30.0% |
| ! | ATGGTGATCACTTAATTTGA+TGG | - | chr8_1:82456824-82456843 | None:intergenic | 30.0% |
| CAAATTAAGTGATCACCATA+TGG | + | chr8_1:82456825-82456844 | Msa1219540:intron | 30.0% | |
| !!! | CAAACTTTTTTCTGACCATA+TGG | - | chr8_1:82456843-82456862 | None:intergenic | 30.0% |
| GAAAAAAGTTTGAGAATACG+AGG | + | chr8_1:82456851-82456870 | Msa1219540:intron | 30.0% | |
| !! | TTCATTTTTCTTGCAGATCA+AGG | + | chr8_1:82457032-82457051 | Msa1219540:intron | 30.0% |
| !! | TATTCTTTTGGCTAGTTGAA+AGG | + | chr8_1:82457278-82457297 | Msa1219540:intron | 30.0% |
| TTATCACTTGGATGATAAAC+AGG | + | chr8_1:82457311-82457330 | Msa1219540:intron | 30.0% | |
| ACCGCCAAATATTCATATAA+GGG | + | chr8_1:82457444-82457463 | Msa1219540:intron | 30.0% | |
| AAATATTCGGCCAGAATATT+CGG | + | chr8_1:82457559-82457578 | Msa1219540:intron | 30.0% | |
| TTTAGTATCTGATTAGGTCA+TGG | - | chr8_1:82457693-82457712 | None:intergenic | 30.0% | |
| GTGAATGCAATATCAAAACT+TGG | - | chr8_1:82457717-82457736 | None:intergenic | 30.0% | |
| !!! | CATGTTGTTTTGGATTTTTG+GGG | - | chr8_1:82457799-82457818 | None:intergenic | 30.0% |
| !!! | CTCATGTTGTTTTGGATTTT+TGG | - | chr8_1:82457801-82457820 | None:intergenic | 30.0% |
| GACGAAATTCTTATTCTCAA+AGG | + | chr8_1:82457905-82457924 | Msa1219540:intron | 30.0% | |
| ! | AATACATTTTCTCAAGCCAA+TGG | + | chr8_1:82458282-82458301 | Msa1219540:intron | 30.0% |
| ATGTCAACTACAAATTCCAT+TGG | - | chr8_1:82458301-82458320 | None:intergenic | 30.0% | |
| TATTTGCAATAGCATACTTC+AGG | + | chr8_1:82458405-82458424 | Msa1219540:intron | 30.0% | |
| ! | TCTTGATTTGACATTTCTGT+AGG | - | chr8_1:82458544-82458563 | None:intergenic | 30.0% |
| ! | TTTTAACCCTGTCAAAATGT+AGG | + | chr8_1:82458678-82458697 | Msa1219540:intron | 30.0% |
| GTACATCAAACAATTGAAGT+TGG | + | chr8_1:82458703-82458722 | Msa1219540:CDS | 30.0% | |
| GAATTGAGTATGCTATAAGA+AGG | + | chr8_1:82458770-82458789 | Msa1219540:intron | 30.0% | |
| ATCCCAACAACAAAGATATT+AGG | + | chr8_1:82459424-82459443 | Msa1219540:CDS | 30.0% | |
| TCCCAACAACAAAGATATTA+GGG | + | chr8_1:82459425-82459444 | Msa1219540:CDS | 30.0% | |
| !! | TCCCTAATATCTTTGTTGTT+GGG | - | chr8_1:82459429-82459448 | None:intergenic | 30.0% |
| ! | ATCCCTAATATCTTTGTTGT+TGG | - | chr8_1:82459430-82459449 | None:intergenic | 30.0% |
| AAAGATATTAGGGATATTCC+AGG | + | chr8_1:82459435-82459454 | Msa1219540:CDS | 30.0% | |
| AATATTAGAGGATTGCTTTC+TGG | + | chr8_1:82459589-82459608 | Msa1219540:three_prime_UTR | 30.0% | |
| CTACTTGTACTTGAAATTTG+TGG | + | chr8_1:82459778-82459797 | Msa1219540:three_prime_UTR | 30.0% | |
| TGTAAATGTGTCTAATTCAG+AGG | + | chr8_1:82459801-82459820 | Msa1219540:three_prime_UTR | 30.0% | |
| TTATTATGTGCAAGAGATCG+TGG | + | chr8_1:82455054-82455073 | Msa1219540:intron | 35.0% | |
| ! | ATCGTGGTTTTTGTTGACAT+TGG | + | chr8_1:82455070-82455089 | Msa1219540:intron | 35.0% |
| ACCATGAACATGTATATCAG+TGG | - | chr8_1:82455249-82455268 | None:intergenic | 35.0% | |
| ACACTTACAATATGTCAACC+TGG | - | chr8_1:82455297-82455316 | None:intergenic | 35.0% | |
| GGTTGACATATTGTAAGTGT+AGG | + | chr8_1:82455297-82455316 | Msa1219540:intron | 35.0% | |
| !! | CACTTTGTGTTACTTTCTTG+TGG | + | chr8_1:82455516-82455535 | Msa1219540:intron | 35.0% |
| TTGATAAGCATCCAAGTACT+TGG | + | chr8_1:82455597-82455616 | Msa1219540:intron | 35.0% | |
| TGATAAGCATCCAAGTACTT+GGG | + | chr8_1:82455598-82455617 | Msa1219540:intron | 35.0% | |
| AATTAAGAAGTGATAGGGCA+TGG | - | chr8_1:82455700-82455719 | None:intergenic | 35.0% | |
| TATTGATACATGTTGGAGTG+TGG | + | chr8_1:82455799-82455818 | Msa1219540:intron | 35.0% | |
| !! | GCACTTTTTGCATACAGAAA+TGG | + | chr8_1:82455872-82455891 | Msa1219540:intron | 35.0% |
| CTTTAATCTTATCCAGCTTC+TGG | - | chr8_1:82455901-82455920 | None:intergenic | 35.0% | |
| !! | GTAAACAAAGGGTGTTTGTT+TGG | - | chr8_1:82456055-82456074 | None:intergenic | 35.0% |
| CAATAACGTCTCTAACCATT+GGG | - | chr8_1:82456109-82456128 | None:intergenic | 35.0% | |
| ACAATAACGTCTCTAACCAT+TGG | - | chr8_1:82456110-82456129 | None:intergenic | 35.0% | |
| TTAATCAAATCCTGGAAGGT+TGG | - | chr8_1:82456242-82456261 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTGGGTTATCGTAC+TGG | + | chr8_1:82456359-82456378 | Msa1219540:intron | 35.0% |
| ! | GAAATTAAAGATGAAGGTGC+AGG | + | chr8_1:82456586-82456605 | Msa1219540:CDS | 35.0% |
| CAATGACGAAAAGCAATCAA+TGG | + | chr8_1:82456636-82456655 | Msa1219540:CDS | 35.0% | |
| !!! | TACCTCGTCAAAGTTTTGAA+AGG | + | chr8_1:82456709-82456728 | Msa1219540:intron | 35.0% |
| !!! | ACCTCGTCAAAGTTTTGAAA+GGG | + | chr8_1:82456710-82456729 | Msa1219540:intron | 35.0% |
| AAAGTTTGAGAATACGAGGA+TGG | + | chr8_1:82456855-82456874 | Msa1219540:intron | 35.0% | |
| AACAGGTACATGAATACGAT+TGG | + | chr8_1:82457328-82457347 | Msa1219540:intron | 35.0% | |
| TGCCAATTGAACATTTCCTT+CGG | - | chr8_1:82457407-82457426 | None:intergenic | 35.0% | |
| GACCGCCAAATATTCATATA+AGG | + | chr8_1:82457443-82457462 | Msa1219540:intron | 35.0% | |
| GCCCTTATATGAATATTTGG+CGG | - | chr8_1:82457448-82457467 | None:intergenic | 35.0% | |
| GAATATTCTGGCCGAATATT+TGG | - | chr8_1:82457560-82457579 | None:intergenic | 35.0% | |
| CTTGGGTTTAGTATCTGATT+AGG | - | chr8_1:82457699-82457718 | None:intergenic | 35.0% | |
| ! | ATTTTCATCCCAAAATCCCA+CGG | - | chr8_1:82457761-82457780 | None:intergenic | 35.0% |
| ATTTGATGTTTGCTCCTTTG+AGG | - | chr8_1:82457858-82457877 | None:intergenic | 35.0% | |
| TACAAGAATCTTCACTCTGA+AGG | + | chr8_1:82457883-82457902 | Msa1219540:intron | 35.0% | |
| TCATGAAAGGAGTTGCAAAA+AGG | - | chr8_1:82457982-82458001 | None:intergenic | 35.0% | |
| CACACTAAGCAAATCATGAA+AGG | - | chr8_1:82457995-82458014 | None:intergenic | 35.0% | |
| AAACCCAGACAAAATCTAAG+AGG | + | chr8_1:82458015-82458034 | Msa1219540:intron | 35.0% | |
| ! | AAGCCTCTTAGATTTTGTCT+GGG | - | chr8_1:82458021-82458040 | None:intergenic | 35.0% |
| ! | AAAGCCTCTTAGATTTTGTC+TGG | - | chr8_1:82458022-82458041 | None:intergenic | 35.0% |
| ! | AAATCTAAGAGGCTTTTGTG+TGG | + | chr8_1:82458026-82458045 | Msa1219540:intron | 35.0% |
| ! | AATCTAAGAGGCTTTTGTGT+GGG | + | chr8_1:82458027-82458046 | Msa1219540:intron | 35.0% |
| GACGAAATCCTAATTCACAA+AGG | - | chr8_1:82458144-82458163 | None:intergenic | 35.0% | |
| AGTTTGATGTTTGCTTCTTG+AGG | + | chr8_1:82458185-82458204 | Msa1219540:intron | 35.0% | |
| AAACCACACAAAAATAGCCT+AGG | - | chr8_1:82458469-82458488 | None:intergenic | 35.0% | |
| AATCAAGAACTTGTCAATGC+TGG | + | chr8_1:82458556-82458575 | Msa1219540:CDS | 35.0% | |
| ATCAAGAACTTGTCAATGCT+GGG | + | chr8_1:82458557-82458576 | Msa1219540:CDS | 35.0% | |
| !! | GTACAACCTACATTTTGACA+GGG | - | chr8_1:82458687-82458706 | None:intergenic | 35.0% |
| !! | TGTACAACCTACATTTTGAC+AGG | - | chr8_1:82458688-82458707 | None:intergenic | 35.0% |
| CTATAAGAAGGAAAGAGTCT+AGG | + | chr8_1:82458782-82458801 | Msa1219540:intron | 35.0% | |
| AATCATGCAGACTGAACAAA+TGG | + | chr8_1:82458838-82458857 | Msa1219540:intron | 35.0% | |
| ATCATGCAGACTGAACAAAT+GGG | + | chr8_1:82458839-82458858 | Msa1219540:intron | 35.0% | |
| ACCAATCTCCTTAACAAGTT+GGG | - | chr8_1:82458915-82458934 | None:intergenic | 35.0% | |
| TACCAATCTCCTTAACAAGT+TGG | - | chr8_1:82458916-82458935 | None:intergenic | 35.0% | |
| TACAGCAGTCCATATAAACA+AGG | - | chr8_1:82458957-82458976 | None:intergenic | 35.0% | |
| TATTTCTTCCAAACCTGTCA+TGG | + | chr8_1:82458975-82458994 | Msa1219540:intron | 35.0% | |
| ! | TTTCTGTTTCTTATCGTCTG+TGG | + | chr8_1:82459054-82459073 | Msa1219540:CDS | 35.0% |
| TCATACCTTCACGACAATAA+TGG | - | chr8_1:82459088-82459107 | None:intergenic | 35.0% | |
| TGTGCACATAAACATGCAAT+AGG | - | chr8_1:82459309-82459328 | None:intergenic | 35.0% | |
| TATTAGGGATATTCCAGGAT+TGG | + | chr8_1:82459440-82459459 | Msa1219540:CDS | 35.0% | |
| GATAAGAACAAGAACCAAGT+TGG | - | chr8_1:82459564-82459583 | None:intergenic | 35.0% | |
| GATTGTTACATTAAGAGACG+TGG | - | chr8_1:82459726-82459745 | None:intergenic | 35.0% | |
| TCTCTCTAGCCCTAAATATT+TGG | - | chr8_1:82459748-82459767 | None:intergenic | 35.0% | |
| ACACATCAAAAAATAGGGGA+GGG | - | chr8_1:82459837-82459856 | None:intergenic | 35.0% | |
| TACACATCAAAAAATAGGGG+AGG | - | chr8_1:82459838-82459857 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGATGAGAG+AGG | - | chr8_1:82454788-82454807 | None:intergenic | 40.0% |
| ! | TTTTCTTTGCCGGGATTTTG+AGG | + | chr8_1:82454837-82454856 | Msa1219540:five_prime_UTR | 40.0% |
| ! | TTTCTTTGCCGGGATTTTGA+GGG | + | chr8_1:82454838-82454857 | Msa1219540:five_prime_UTR | 40.0% |
| GAGTTTAACCCTCAAAATCC+CGG | - | chr8_1:82454849-82454868 | None:intergenic | 40.0% | |
| AGATGTCACGAATTTCACCA+TGG | - | chr8_1:82454927-82454946 | None:intergenic | 40.0% | |
| ! | GTGGTTTTTGTTGACATTGG+AGG | + | chr8_1:82455073-82455092 | Msa1219540:intron | 40.0% |
| GCCACTGATATACATGTTCA+TGG | + | chr8_1:82455245-82455264 | Msa1219540:intron | 40.0% | |
| GTGTAGGTAGCTAAGACTAA+TGG | + | chr8_1:82455313-82455332 | Msa1219540:intron | 40.0% | |
| ! | TAAGCAACCACCAAAGTACT+TGG | + | chr8_1:82455390-82455409 | Msa1219540:intron | 40.0% |
| ! | AAGCAACCACCAAAGTACTT+GGG | + | chr8_1:82455391-82455410 | Msa1219540:intron | 40.0% |
| TGTTGGTATAATAGGGACTC+GGG | - | chr8_1:82455498-82455517 | None:intergenic | 40.0% | |
| ! | GTGTTGGTATAATAGGGACT+CGG | - | chr8_1:82455499-82455518 | None:intergenic | 40.0% |
| ! | TTAGTACTAACGCTGGTTGT+CGG | - | chr8_1:82455577-82455596 | None:intergenic | 40.0% |
| GATAAGCATCCAAGTACTTG+GGG | + | chr8_1:82455599-82455618 | Msa1219540:intron | 40.0% | |
| ATCAAGTAGTATGGGATGCT+CGG | - | chr8_1:82455646-82455665 | None:intergenic | 40.0% | |
| CATCCCATACTACTTGATGT+GGG | + | chr8_1:82455648-82455667 | Msa1219540:intron | 40.0% | |
| AGTCCCACATCAAGTAGTAT+GGG | - | chr8_1:82455654-82455673 | None:intergenic | 40.0% | |
| AAGTCCCACATCAAGTAGTA+TGG | - | chr8_1:82455655-82455674 | None:intergenic | 40.0% | |
| CAGCTGAGTACTTTGTCTAT+TGG | - | chr8_1:82455927-82455946 | None:intergenic | 40.0% | |
| ! | CAATAGACAAAGTACTCAGC+TGG | + | chr8_1:82455925-82455944 | Msa1219540:CDS | 40.0% |
| ATCATAAACAAGAGGAGCCT+TGG | + | chr8_1:82456083-82456102 | Msa1219540:intron | 40.0% | |
| AGAGACGTTATTGTGTGACT+AGG | + | chr8_1:82456116-82456135 | Msa1219540:intron | 40.0% | |
| AGTTGCTTGTTCACTTCTTC+GGG | - | chr8_1:82456616-82456635 | None:intergenic | 40.0% | |
| GAGTTGCTTGTTCACTTCTT+CGG | - | chr8_1:82456617-82456636 | None:intergenic | 40.0% | |
| ACCCTTTCAAAACTTTGACG+AGG | - | chr8_1:82456714-82456733 | None:intergenic | 40.0% | |
| TCAAGATCCTCCTTGTATTG+TGG | + | chr8_1:82456734-82456753 | Msa1219540:intron | 40.0% | |
| TGTCAATCCACAATACAAGG+AGG | - | chr8_1:82456744-82456763 | None:intergenic | 40.0% | |
| GAGTGTCAATCCACAATACA+AGG | - | chr8_1:82456747-82456766 | None:intergenic | 40.0% | |
| AACTCGTTACACGCAGAAAA+AGG | - | chr8_1:82456777-82456796 | None:intergenic | 40.0% | |
| CAAGGAGCTAAACTCATATG+TGG | + | chr8_1:82457050-82457069 | Msa1219540:CDS | 40.0% | |
| ACGAGAAATACCAATTCCGT+AGG | + | chr8_1:82457160-82457179 | Msa1219540:intron | 40.0% | |
| AGAAATACCAATTCCGTAGG+AGG | + | chr8_1:82457163-82457182 | Msa1219540:intron | 40.0% | |
| !! | CTTTTGGCTAGTTGAAAGGA+CGG | + | chr8_1:82457282-82457301 | Msa1219540:intron | 40.0% |
| ! | GGACGGTTGATATTATCACT+TGG | + | chr8_1:82457299-82457318 | Msa1219540:intron | 40.0% |
| AGCCGAAGGAAATGTTCAAT+TGG | + | chr8_1:82457402-82457421 | Msa1219540:CDS | 40.0% | |
| GGAAATGTTCAATTGGCATC+AGG | + | chr8_1:82457409-82457428 | Msa1219540:CDS | 40.0% | |
| TTGGCATCAGGTAACATGTT+TGG | + | chr8_1:82457421-82457440 | Msa1219540:intron | 40.0% | |
| CGGGCCCTTATATGAATATT+TGG | - | chr8_1:82457451-82457470 | None:intergenic | 40.0% | |
| AATATTTGGCCTCAAGGTTC+GGG | - | chr8_1:82457546-82457565 | None:intergenic | 40.0% | |
| GAATATTTGGCCTCAAGGTT+CGG | - | chr8_1:82457547-82457566 | None:intergenic | 40.0% | |
| GAACCTTGAGGCCAAATATT+CGG | + | chr8_1:82457546-82457565 | Msa1219540:intron | 40.0% | |
| GGCCAGAATATTCGGATATA+GGG | + | chr8_1:82457567-82457586 | Msa1219540:intron | 40.0% | |
| GCCAGAATATTCGGATATAG+GGG | + | chr8_1:82457568-82457587 | Msa1219540:intron | 40.0% | |
| CCAGAATATTCGGATATAGG+GGG | + | chr8_1:82457569-82457588 | Msa1219540:intron | 40.0% | |
| !!! | GGTGCTATTATAGCCCTTTT+GGG | - | chr8_1:82457652-82457671 | None:intergenic | 40.0% |
| ATCTGATTAGGTCATGGCTT+GGG | - | chr8_1:82457687-82457706 | None:intergenic | 40.0% | |
| TATCTGATTAGGTCATGGCT+TGG | - | chr8_1:82457688-82457707 | None:intergenic | 40.0% | |
| GCATTCACTGCAAGTACATT+TGG | + | chr8_1:82457729-82457748 | Msa1219540:intron | 40.0% | |
| CTAAGAGGCCTTTGTGAATT+AGG | + | chr8_1:82458133-82458152 | Msa1219540:intron | 40.0% | |
| TTTGCTTCTTGAGGAAGAAG+AGG | + | chr8_1:82458194-82458213 | Msa1219540:intron | 40.0% | |
| TTGCTTCTTGAGGAAGAAGA+GGG | + | chr8_1:82458195-82458214 | Msa1219540:intron | 40.0% | |
| ! | TCTTTTCCGTGCATCCTTTT+TGG | + | chr8_1:82458434-82458453 | Msa1219540:intron | 40.0% |
| ! | CTTTTCCGTGCATCCTTTTT+GGG | + | chr8_1:82458435-82458454 | Msa1219540:intron | 40.0% |
| ! | TTTTCCGTGCATCCTTTTTG+GGG | + | chr8_1:82458436-82458455 | Msa1219540:intron | 40.0% |
| CTTCAAGGTAGAAGCAGTTT+GGG | - | chr8_1:82458731-82458750 | None:intergenic | 40.0% | |
| CAAACTGCTTCTACCTTGAA+GGG | + | chr8_1:82458730-82458749 | Msa1219540:CDS | 40.0% | |
| ! | AATCTCCTTAACAAGTTGGG+AGG | - | chr8_1:82458912-82458931 | None:intergenic | 40.0% |
| !! | TCCCAACTTGTTAAGGAGAT+TGG | + | chr8_1:82458911-82458930 | Msa1219540:CDS | 40.0% |
| TGTTAAGGAGATTGGTAGAC+AGG | + | chr8_1:82458919-82458938 | Msa1219540:CDS | 40.0% | |
| ACTTAGTTCCATGACAGGTT+TGG | - | chr8_1:82458986-82459005 | None:intergenic | 40.0% | |
| TCTGTAGCAACCTGATAACA+GGG | - | chr8_1:82459018-82459037 | None:intergenic | 40.0% | |
| GATTGCCATTATTGTCGTGA+AGG | + | chr8_1:82459080-82459099 | Msa1219540:CDS | 40.0% | |
| GCAATCACTATTCACTAGCA+CGG | - | chr8_1:82459287-82459306 | None:intergenic | 40.0% | |
| ATTAGAGGATTGCTTTCTGG+AGG | + | chr8_1:82459592-82459611 | Msa1219540:three_prime_UTR | 40.0% | |
| CACATCAAAAAATAGGGGAG+GGG | - | chr8_1:82459836-82459855 | None:intergenic | 40.0% | |
| ACAGCACGACACAAACACAA+CGG | - | chr8_1:82454634-82454653 | None:intergenic | 45.0% | |
| !! | GATGAGAGAGGAAGCATTAG+TGG | - | chr8_1:82454776-82454795 | None:intergenic | 45.0% |
| !! | CATCTTCAAGTTGGAAGCCA+TGG | - | chr8_1:82454884-82454903 | None:intergenic | 45.0% |
| TGATGAAGATGCATACGCGA+GGG | - | chr8_1:82454956-82454975 | None:intergenic | 45.0% | |
| ATGATGAAGATGCATACGCG+AGG | - | chr8_1:82454957-82454976 | None:intergenic | 45.0% | |
| ! | AGCAACCACCAAAGTACTTG+GGG | + | chr8_1:82455392-82455411 | Msa1219540:intron | 45.0% |
| GTTCTTTCCCCCAAGTACTT+TGG | - | chr8_1:82455403-82455422 | None:intergenic | 45.0% | |
| ! | GAGGGAGTACGTAAGATGTT+TGG | - | chr8_1:82455425-82455444 | None:intergenic | 45.0% |
| AGTCTCACATCGAGTGGTAT+GGG | - | chr8_1:82455454-82455473 | None:intergenic | 45.0% | |
| AAGTCTCACATCGAGTGGTA+TGG | - | chr8_1:82455455-82455474 | None:intergenic | 45.0% | |
| TACCACTCGATGTGAGACTT+AGG | + | chr8_1:82455455-82455474 | Msa1219540:intron | 45.0% | |
| GCATCCCATACTACTTGATG+TGG | + | chr8_1:82455647-82455666 | Msa1219540:intron | 45.0% | |
| AGGGCATGGTTGGGTATTAT+GGG | - | chr8_1:82455686-82455705 | None:intergenic | 45.0% | |
| TAGGGCATGGTTGGGTATTA+TGG | - | chr8_1:82455687-82455706 | None:intergenic | 45.0% | |
| AGAAGTGATAGGGCATGGTT+GGG | - | chr8_1:82455695-82455714 | None:intergenic | 45.0% | |
| AAGAAGTGATAGGGCATGGT+TGG | - | chr8_1:82455696-82455715 | None:intergenic | 45.0% | |
| ! | TAGACAAAGTACTCAGCTGG+AGG | + | chr8_1:82455928-82455947 | Msa1219540:CDS | 45.0% |
| GAAAAACTAAAGGGGCAGCA+GGG | - | chr8_1:82456169-82456188 | None:intergenic | 45.0% | |
| TGAAAAACTAAAGGGGCAGC+AGG | - | chr8_1:82456170-82456189 | None:intergenic | 45.0% | |
| AAAGCTGAACATGCCTCCTA+CGG | - | chr8_1:82457179-82457198 | None:intergenic | 45.0% | |
| ! | GAACTTTTTGACATGGGAGC+TGG | + | chr8_1:82457364-82457383 | Msa1219540:CDS | 45.0% |
| TTTGGGGGGATAAGAAAAGG+GGG | - | chr8_1:82457515-82457534 | None:intergenic | 45.0% | |
| GTTTGGGGGGATAAGAAAAG+GGG | - | chr8_1:82457516-82457535 | None:intergenic | 45.0% | |
| GGTTTGGGGGGATAAGAAAA+GGG | - | chr8_1:82457517-82457536 | None:intergenic | 45.0% | |
| ! | TGGTTTGGGGGGATAAGAAA+AGG | - | chr8_1:82457518-82457537 | None:intergenic | 45.0% |
| ! | AGGTTCGGGATTGATGGTTT+GGG | - | chr8_1:82457532-82457551 | None:intergenic | 45.0% |
| ! | AAGGTTCGGGATTGATGGTT+TGG | - | chr8_1:82457533-82457552 | None:intergenic | 45.0% |
| CGGCCAGAATATTCGGATAT+AGG | + | chr8_1:82457566-82457585 | Msa1219540:intron | 45.0% | |
| CCCCCTATATCCGAATATTC+TGG | - | chr8_1:82457572-82457591 | None:intergenic | 45.0% | |
| ! | TACGCGTTTTACGCTCTGAT+CGG | + | chr8_1:82457595-82457614 | Msa1219540:intron | 45.0% |
| TACGCTCTGATCGGTAACTT+AGG | + | chr8_1:82457604-82457623 | Msa1219540:intron | 45.0% | |
| ACGCTCTGATCGGTAACTTA+GGG | + | chr8_1:82457605-82457624 | Msa1219540:intron | 45.0% | |
| !!! | GGGTGCTATTATAGCCCTTT+TGG | - | chr8_1:82457653-82457672 | None:intergenic | 45.0% |
| AAGGGCTATAATAGCACCCT+TGG | + | chr8_1:82457654-82457673 | Msa1219540:intron | 45.0% | |
| AGGGCTATAATAGCACCCTT+GGG | + | chr8_1:82457655-82457674 | Msa1219540:intron | 45.0% | |
| AACACCCTCTTCTTCCTCAA+AGG | + | chr8_1:82457841-82457860 | Msa1219540:intron | 45.0% | |
| ! | TGCTCCTTTGAGGAAGAAGA+GGG | - | chr8_1:82457848-82457867 | None:intergenic | 45.0% |
| ! | TTGCTCCTTTGAGGAAGAAG+AGG | - | chr8_1:82457849-82457868 | None:intergenic | 45.0% |
| GCTTAGATCTCTCAATAGCC+TGG | - | chr8_1:82458606-82458625 | None:intergenic | 45.0% | |
| GGCTATTGAGAGATCTAAGC+AGG | + | chr8_1:82458606-82458625 | Msa1219540:CDS | 45.0% | |
| CCTTCAAGGTAGAAGCAGTT+TGG | - | chr8_1:82458732-82458751 | None:intergenic | 45.0% | |
| CCAAACTGCTTCTACCTTGA+AGG | + | chr8_1:82458729-82458748 | Msa1219540:CDS | 45.0% | |
| CAAACTTACTTGGCCCTTCA+AGG | - | chr8_1:82458746-82458765 | None:intergenic | 45.0% | |
| GGACAACTTAGTTCCATGAC+AGG | - | chr8_1:82458991-82459010 | None:intergenic | 45.0% | |
| TTGTCCTTACCCCTGTTATC+AGG | + | chr8_1:82459005-82459024 | Msa1219540:intron | 45.0% | |
| CTGTAGCAACCTGATAACAG+GGG | - | chr8_1:82459017-82459036 | None:intergenic | 45.0% | |
| GTCTGTAGCAACCTGATAAC+AGG | - | chr8_1:82459019-82459038 | None:intergenic | 45.0% | |
| ! | TGAGAAAAGGTGCGAGAACT+TGG | + | chr8_1:82459248-82459267 | Msa1219540:intron | 45.0% |
| GTGCGAGAACTTGGATTTCA+TGG | + | chr8_1:82459257-82459276 | Msa1219540:intron | 45.0% | |
| ACGTACAAAAGCCTCCTTGA+GGG | - | chr8_1:82459477-82459496 | None:intergenic | 45.0% | |
| TACGTACAAAAGCCTCCTTG+AGG | - | chr8_1:82459478-82459497 | None:intergenic | 45.0% | |
| ! | CAAGGAGGCTTTTGTACGTA+CGG | + | chr8_1:82459478-82459497 | Msa1219540:CDS | 45.0% |
| CAATTCTAGTCCTGCCAACT+TGG | + | chr8_1:82459547-82459566 | Msa1219540:three_prime_UTR | 45.0% | |
| ! | AGAACAAGAACCAAGTTGGC+AGG | - | chr8_1:82459560-82459579 | None:intergenic | 45.0% |
| CAGAAGTTGGACATGTGCTG+TGG | - | chr8_1:82454607-82454626 | None:intergenic | 50.0% | |
| ACACAACGGAACGCAGAAGT+TGG | - | chr8_1:82454620-82454639 | None:intergenic | 50.0% | |
| AACTCAATCTCCCGCATCCA+TGG | + | chr8_1:82454864-82454883 | Msa1219540:exon | 50.0% | |
| AAGTTGGAAGCCATGGATGC+GGG | - | chr8_1:82454877-82454896 | None:intergenic | 50.0% | |
| ! | CAAGTTGGAAGCCATGGATG+CGG | - | chr8_1:82454878-82454897 | None:intergenic | 50.0% |
| CTGAGGGGTCATCTTCAAGT+TGG | - | chr8_1:82454893-82454912 | None:intergenic | 50.0% | |
| ATGGATCTGTTCGAGCTGAG+GGG | - | chr8_1:82454908-82454927 | None:intergenic | 50.0% | |
| CATGGATCTGTTCGAGCTGA+GGG | - | chr8_1:82454909-82454928 | None:intergenic | 50.0% | |
| CTGGTTGTCACTGCACAACA+AGG | - | chr8_1:82455278-82455297 | None:intergenic | 50.0% | |
| ! | CTTGTTGTGCAGTGACAACC+AGG | + | chr8_1:82455276-82455295 | Msa1219540:intron | 50.0% |
| ! | GCAACCACCAAAGTACTTGG+GGG | + | chr8_1:82455393-82455412 | Msa1219540:intron | 50.0% |
| CTTTCCCCCAAGTACTTTGG+TGG | - | chr8_1:82455400-82455419 | None:intergenic | 50.0% | |
| GAGTGGTATGGGATGCTTGA+GGG | - | chr8_1:82455443-82455462 | None:intergenic | 50.0% | |
| !!! | GTTTTGGAGAAGACCACCGA+CGG | - | chr8_1:82455553-82455572 | None:intergenic | 50.0% |
| !! | AACGCTGGTTGTCGGTGTTT+TGG | - | chr8_1:82455569-82455588 | None:intergenic | 50.0% |
| GGGATTGTTCCCCAAGTACT+TGG | - | chr8_1:82455611-82455630 | None:intergenic | 50.0% | |
| GCATGGTTGGGTATTATGGG+GGG | - | chr8_1:82455683-82455702 | None:intergenic | 50.0% | |
| GGCATGGTTGGGTATTATGG+GGG | - | chr8_1:82455684-82455703 | None:intergenic | 50.0% | |
| GGGCATGGTTGGGTATTATG+GGG | - | chr8_1:82455685-82455704 | None:intergenic | 50.0% | |
| CAGAAATGGCTTCCAGAAGC+TGG | + | chr8_1:82455886-82455905 | Msa1219540:intron | 50.0% | |
| TTTGCAGTCCCTCATCTTCC+CGG | - | chr8_1:82455960-82455979 | None:intergenic | 50.0% | |
| GGAAGATGAGGGACTGCAAA+AGG | + | chr8_1:82455960-82455979 | Msa1219540:CDS | 50.0% | |
| TGGCAAGATTCGACTCAGCA+GGG | - | chr8_1:82456143-82456162 | None:intergenic | 50.0% | |
| ACATCTCATGCCAACCTTCC+AGG | + | chr8_1:82456229-82456248 | Msa1219540:intron | 50.0% | |
| TATAGAGCGGGGTTGCATGT+TGG | - | chr8_1:82456308-82456327 | None:intergenic | 50.0% | |
| GAACATGCCTCCTACGGAAT+TGG | - | chr8_1:82457173-82457192 | None:intergenic | 50.0% | |
| GCAAGTGAATCTACAGCCGA+AGG | + | chr8_1:82457388-82457407 | Msa1219540:CDS | 50.0% | |
| TTGGGGGGATAAGAAAAGGG+GGG | - | chr8_1:82457514-82457533 | None:intergenic | 50.0% | |
| ! | TTCGGGATTGATGGTTTGGG+GGG | - | chr8_1:82457529-82457548 | None:intergenic | 50.0% |
| ! | GTTCGGGATTGATGGTTTGG+GGG | - | chr8_1:82457530-82457549 | None:intergenic | 50.0% |
| ! | GGTTCGGGATTGATGGTTTG+GGG | - | chr8_1:82457531-82457550 | None:intergenic | 50.0% |
| ACCATCAATCCCGAACCTTG+AGG | + | chr8_1:82457534-82457553 | Msa1219540:intron | 50.0% | |
| TGGCCGAATATTTGGCCTCA+AGG | - | chr8_1:82457552-82457571 | None:intergenic | 50.0% | |
| GCGTGGAAGAATGCCCAAAA+GGG | + | chr8_1:82457636-82457655 | Msa1219540:intron | 50.0% | |
| ! | TGGCTTGGGAATGATCCCAA+GGG | - | chr8_1:82457673-82457692 | None:intergenic | 50.0% |
| ! | ATGGCTTGGGAATGATCCCA+AGG | - | chr8_1:82457674-82457693 | None:intergenic | 50.0% |
| TCATCCCAAAATCCCACGGT+GGG | - | chr8_1:82457757-82457776 | None:intergenic | 50.0% | |
| TTCATCCCAAAATCCCACGG+TGG | - | chr8_1:82457758-82457777 | None:intergenic | 50.0% | |
| CAGACCCCAAAAAGGATGCA+CGG | - | chr8_1:82458443-82458462 | None:intergenic | 50.0% | |
| !!! | GTGCATCCTTTTTGGGGTCT+GGG | + | chr8_1:82458442-82458461 | Msa1219540:intron | 50.0% |
| !!! | TGCATCCTTTTTGGGGTCTG+GGG | + | chr8_1:82458443-82458462 | Msa1219540:intron | 50.0% |
| !!! | GGGCCTAGGCTATTTTTGTG+TGG | + | chr8_1:82458463-82458482 | Msa1219540:intron | 50.0% |
| GACAATGGATGAGACTGACC+AGG | + | chr8_1:82458585-82458604 | Msa1219540:CDS | 50.0% | |
| AAATGGTGTGGGCGCAATGA+AGG | - | chr8_1:82458652-82458671 | None:intergenic | 50.0% | |
| !! | GAAGGCCTCCCAACTTGTTA+AGG | + | chr8_1:82458904-82458923 | Msa1219540:CDS | 50.0% |
| GCAACCTGATAACAGGGGTA+AGG | - | chr8_1:82459012-82459031 | None:intergenic | 50.0% | |
| AAAAGCCTCCTTGAGGGAAC+TGG | - | chr8_1:82459471-82459490 | None:intergenic | 50.0% | |
| ! | AGGCTTTTGTACGTACGGAC+TGG | + | chr8_1:82459483-82459502 | Msa1219540:CDS | 50.0% |
| ATTAAGAGACGTGGCACTCG+AGG | - | chr8_1:82459717-82459736 | None:intergenic | 50.0% | |
| CCATGGATCTGTTCGAGCTG+AGG | - | chr8_1:82454910-82454929 | None:intergenic | 55.0% | |
| CCTCAGCTCGAACAGATCCA+TGG | + | chr8_1:82454907-82454926 | Msa1219540:CDS | 55.0% | |
| AAGATGCATACGCGAGGGCA+CGG | - | chr8_1:82454951-82454970 | None:intergenic | 55.0% | |
| CGAGTGGTATGGGATGCTTG+AGG | - | chr8_1:82455444-82455463 | None:intergenic | 55.0% | |
| CGCCTAAGTCTCACATCGAG+TGG | - | chr8_1:82455460-82455479 | None:intergenic | 55.0% | |
| ATGTGAGACTTAGGCGTCCC+AGG | + | chr8_1:82455464-82455483 | Msa1219540:intron | 55.0% | |
| TGTGGGTCAAAACCCTCCGT+CGG | + | chr8_1:82455534-82455553 | Msa1219540:intron | 55.0% | |
| ATGCTCGGCGAAACACTCAG+GGG | - | chr8_1:82455631-82455650 | None:intergenic | 55.0% | |
| GATGCTCGGCGAAACACTCA+GGG | - | chr8_1:82455632-82455651 | None:intergenic | 55.0% | |
| ACTCAGCTGGAGGAACTCAC+CGG | + | chr8_1:82455938-82455957 | Msa1219540:CDS | 55.0% | |
| AGGAACTCACCGGGAAGATG+AGG | + | chr8_1:82455948-82455967 | Msa1219540:CDS | 55.0% | |
| GGAACTCACCGGGAAGATGA+GGG | + | chr8_1:82455949-82455968 | Msa1219540:CDS | 55.0% | |
| CGTCTCTAACCATTGGGCCA+AGG | - | chr8_1:82456103-82456122 | None:intergenic | 55.0% | |
| CTGGCAAGATTCGACTCAGC+AGG | - | chr8_1:82456144-82456163 | None:intergenic | 55.0% | |
| CTGCTGAGTCGAATCTTGCC+AGG | + | chr8_1:82456142-82456161 | Msa1219540:intron | 55.0% | |
| TGCCCTTGCTTAGGGCTAAC+GGG | - | chr8_1:82457470-82457489 | None:intergenic | 55.0% | |
| GTGCCCTTGCTTAGGGCTAA+CGG | - | chr8_1:82457471-82457490 | None:intergenic | 55.0% | |
| GCCTCAAGGTTCGGGATTGA+TGG | - | chr8_1:82457538-82457557 | None:intergenic | 55.0% | |
| AACTTAGGGAGTGAGTCGCG+TGG | + | chr8_1:82457619-82457638 | Msa1219540:intron | 55.0% | |
| CGCGTGGAAGAATGCCCAAA+AGG | + | chr8_1:82457635-82457654 | Msa1219540:intron | 55.0% | |
| !!! | CGTGCATCCTTTTTGGGGTC+TGG | + | chr8_1:82458441-82458460 | Msa1219540:intron | 55.0% |
| AGACTTAGGCGTCCCAGGAC+AGG | + | chr8_1:82455469-82455488 | Msa1219540:intron | 60.0% | |
| TGGAGAAGACCACCGACGGA+GGG | - | chr8_1:82455549-82455568 | None:intergenic | 60.0% | |
| TTGGAGAAGACCACCGACGG+AGG | - | chr8_1:82455550-82455569 | None:intergenic | 60.0% | |
| GGATGCTCGGCGAAACACTC+AGG | - | chr8_1:82455633-82455652 | None:intergenic | 60.0% | |
| CTCAGCTGGAGGAACTCACC+GGG | + | chr8_1:82455939-82455958 | Msa1219540:CDS | 60.0% | |
| CAAGAGGAGCCTTGGCCCAA+TGG | + | chr8_1:82456091-82456110 | Msa1219540:intron | 60.0% | |
| GGCCCGTTAGCCCTAAGCAA+GGG | + | chr8_1:82457465-82457484 | Msa1219540:intron | 60.0% | |
| !! | CATGGGGGTGCCCTTGCTTA+GGG | - | chr8_1:82457478-82457497 | None:intergenic | 60.0% |
| !! | TCATGGGGGTGCCCTTGCTT+AGG | - | chr8_1:82457479-82457498 | None:intergenic | 60.0% |
| ! | AGGGCACCCCCATGACAGAA+TGG | + | chr8_1:82457484-82457503 | Msa1219540:intron | 60.0% |
| GGGCACCCCCATGACAGAAT+GGG | + | chr8_1:82457485-82457504 | Msa1219540:intron | 60.0% | |
| GGCACCCCCATGACAGAATG+GGG | + | chr8_1:82457486-82457505 | Msa1219540:intron | 60.0% | |
| AGTACATTTGGCGCCCACCG+TGG | + | chr8_1:82457741-82457760 | Msa1219540:intron | 60.0% | |
| GTACATTTGGCGCCCACCGT+GGG | + | chr8_1:82457742-82457761 | Msa1219540:intron | 60.0% | |
| CTAGGCCCCAGACCCCAAAA+AGG | - | chr8_1:82458451-82458470 | None:intergenic | 60.0% | |
| !!! | CTTTTTGGGGTCTGGGGCCT+AGG | + | chr8_1:82458449-82458468 | Msa1219540:intron | 60.0% |
| AGCCTCCTTGAGGGAACTGG+AGG | - | chr8_1:82459468-82459487 | None:intergenic | 60.0% | |
| GGACTCGGGCATCCTGTCCT+GGG | - | chr8_1:82455484-82455503 | None:intergenic | 65.0% | |
| GGGTCAAAACCCTCCGTCGG+TGG | + | chr8_1:82455537-82455556 | Msa1219540:intron | 65.0% | |
| CTAAAGGGGCAGCAGGGTCC+TGG | - | chr8_1:82456163-82456182 | None:intergenic | 65.0% | |
| GGGCCCGTTAGCCCTAAGCA+AGG | + | chr8_1:82457464-82457483 | Msa1219540:intron | 65.0% | |
| GGCGCCCCATTCTGTCATGG+GGG | - | chr8_1:82457493-82457512 | None:intergenic | 65.0% | |
| GGGCGCCCCATTCTGTCATG+GGG | - | chr8_1:82457494-82457513 | None:intergenic | 65.0% | |
| ! | GGGGCGCCCCATTCTGTCAT+GGG | - | chr8_1:82457495-82457514 | None:intergenic | 65.0% |
| ! | TGGCGCCCACCGTGGGATTT+TGG | + | chr8_1:82457749-82457768 | Msa1219540:intron | 65.0% |
| ! | GGCGCCCACCGTGGGATTTT+GGG | + | chr8_1:82457750-82457769 | Msa1219540:intron | 65.0% |
| !! | GGAACTGGAGGCGCCAATCC+TGG | - | chr8_1:82459456-82459475 | None:intergenic | 65.0% |
| TGGCGCCTCCAGTTCCCTCA+AGG | + | chr8_1:82459460-82459479 | Msa1219540:CDS | 65.0% | |
| CGCCTCCAGTTCCCTCAAGG+AGG | + | chr8_1:82459463-82459482 | Msa1219540:CDS | 65.0% | |
| GGGACTCGGGCATCCTGTCC+TGG | - | chr8_1:82455485-82455504 | None:intergenic | 70.0% | |
| !! | GGGGGCGCCCCATTCTGTCA+TGG | - | chr8_1:82457496-82457515 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 82454585 | 82459955 | 82454585 | ID=Msa1219540;Name=Msa1219540 |
| chr8_1 | mRNA | 82454585 | 82459955 | 82454585 | ID=Msa1219540-mRNA-1;Parent=Msa1219540;Name=Msa1219540-mRNA-1;_AED=0.13;_eAED=0.13;_QI=275|1|1|1|0.9|0.81|11|434|269 |
| chr8_1 | exon | 82454585 | 82454758 | 82454585 | ID=Msa1219540-mRNA-1:exon:29304;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82454782 | 82454959 | 82454782 | ID=Msa1219540-mRNA-1:exon:29305;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82455889 | 82455981 | 82455889 | ID=Msa1219540-mRNA-1:exon:29306;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82456564 | 82456657 | 82456564 | ID=Msa1219540-mRNA-1:exon:29307;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82457048 | 82457085 | 82457048 | ID=Msa1219540-mRNA-1:exon:29308;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82457333 | 82457430 | 82457333 | ID=Msa1219540-mRNA-1:exon:29309;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82458548 | 82458627 | 82458548 | ID=Msa1219540-mRNA-1:exon:29310;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82458700 | 82458756 | 82458700 | ID=Msa1219540-mRNA-1:exon:29311;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82458848 | 82458940 | 82458848 | ID=Msa1219540-mRNA-1:exon:29312;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82459027 | 82459101 | 82459027 | ID=Msa1219540-mRNA-1:exon:29313;Parent=Msa1219540-mRNA-1 |
| chr8_1 | exon | 82459417 | 82459955 | 82459417 | ID=Msa1219540-mRNA-1:exon:29314;Parent=Msa1219540-mRNA-1 |
| chr8_1 | five_prime_UTR | 82454585 | 82454758 | 82454585 | ID=Msa1219540-mRNA-1:five_prime_utr;Parent=Msa1219540-mRNA-1 |
| chr8_1 | five_prime_UTR | 82454782 | 82454882 | 82454782 | ID=Msa1219540-mRNA-1:five_prime_utr;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82454883 | 82454959 | 82454883 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82455889 | 82455981 | 82455889 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82456564 | 82456657 | 82456564 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82457048 | 82457085 | 82457048 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82457333 | 82457430 | 82457333 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82458548 | 82458627 | 82458548 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82458700 | 82458756 | 82458700 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82458848 | 82458940 | 82458848 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82459027 | 82459101 | 82459027 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | CDS | 82459417 | 82459521 | 82459417 | ID=Msa1219540-mRNA-1:cds;Parent=Msa1219540-mRNA-1 |
| chr8_1 | three_prime_UTR | 82459522 | 82459955 | 82459522 | ID=Msa1219540-mRNA-1:three_prime_utr;Parent=Msa1219540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
