AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1427600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427600 MtrunA17_Chr8g0362571 90.832 938 36 5 34 946 1 913 0.0 1698
Msa1427600 MtrunA17_Chr7g0218861 56.500 400 143 6 571 941 562 959 4.09e-155 482
Msa1427600 MtrunA17_Chr1g0157251 44.192 396 186 7 575 942 43 431 2.67e-112 352
Msa1427600 MtrunA17_Chr1g0153391 44.776 402 180 8 578 942 25 421 3.73e-108 341
Msa1427600 MtrunA17_Chr1g0153421 44.690 226 113 6 725 944 2 221 1.99e-52 182
Msa1427600 MtrunA17_Chr1g0153411 32.571 175 84 4 578 719 25 198 9.31e-24 100
Msa1427600 MtrunA17_Chr8g0343341 35.211 71 46 0 680 750 46 116 5.32e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1427600 AT1G69830.1 62.587 866 253 9 102 942 66 885 0.0 1104
Msa1427600 AT1G76130.2 44.949 396 183 7 575 942 24 412 5.70e-112 351
Msa1427600 AT1G76130.1 44.949 396 183 7 575 942 24 412 5.70e-112 351
Msa1427600 AT4G25000.1 41.604 399 195 8 578 942 27 421 3.80e-92 299

Find 243 sgRNAs with CRISPR-Local

Find 676 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCATTGGGGAGTTTC+TGG 0.091608 tig0026192:+13896 Msa1427600:CDS
TCAATTACTTCAAAAGTTTA+TGG 0.108808 tig0026192:-22158 None:intergenic
CCATAGGCTTATTGTATAAT+TGG 0.117740 tig0026192:+21895 Msa1427600:three_prime_UTR
GTAGCAAAAGTTTCAAATTT+TGG 0.135634 tig0026192:-13063 None:intergenic
AAACTATTGTCTACCTTTAT+AGG 0.158801 tig0026192:-14299 None:intergenic
CTCTTGGCTTTACTGTTATT+TGG 0.163991 tig0026192:+16664 Msa1427600:CDS
AAGGAGGATGCTAATTTAAT+TGG 0.164978 tig0026192:+14707 Msa1427600:CDS
TTGACTTTGTCAGAGGATTT+TGG 0.181955 tig0026192:+19066 Msa1427600:CDS
AATGGTTTCTTGAGCTTCTT+TGG 0.188878 tig0026192:-16394 None:intergenic
AATGGTATTTGGAACATATT+TGG 0.190723 tig0026192:+17285 Msa1427600:CDS
ACGGAAGAGACTACAATATT+TGG 0.200100 tig0026192:+21786 Msa1427600:CDS
TAGTATGCCAAGGGTTTAAT+TGG 0.203351 tig0026192:+16580 Msa1427600:CDS
GAAATAAGGCATTTGGTTAC+TGG 0.216838 tig0026192:+16339 Msa1427600:CDS
GAGAGAGAGTGTGAAGAATT+TGG 0.220547 tig0026192:-12967 None:intergenic
TTAACTATGGTTCTTGTTCT+TGG 0.227656 tig0026192:+13007 Msa1427600:CDS
CATCGGTTGCTTCTGAATTC+AGG 0.242070 tig0026192:-15358 None:intergenic
CTTCCCTTTCCACTTCCTTT+TGG 0.255177 tig0026192:-16093 None:intergenic
ACAGTAACTTCCTTGGTTAA+AGG 0.278492 tig0026192:-15461 None:intergenic
ATAAACGTCCCTTTCTGATT+TGG 0.282607 tig0026192:-21672 None:intergenic
TATTTCATTGATTATTTCAT+TGG 0.290467 tig0026192:-16322 None:intergenic
GGTGCAATCTACCAGGAAAT+TGG 0.294065 tig0026192:+13873 Msa1427600:CDS
ATGAAATAATCAATGAAATA+AGG 0.296161 tig0026192:+16325 Msa1427600:CDS
TGTGGAATCCGAGGTTGTTT+TGG 0.299314 tig0026192:+16497 Msa1427600:CDS
AAGAACACTGACGGAGTTCC+TGG 0.299428 tig0026192:-20768 None:intergenic
ACTTCCGGTAGCTCAGTTAT+TGG 0.310168 tig0026192:+16228 Msa1427600:CDS
ATTTGGCTTGAAACGGTTAA+TGG 0.313857 tig0026192:-12950 None:intergenic
TTAAGATAAATGAAAATTCA+TGG 0.318297 tig0026192:+16166 Msa1427600:CDS
CAGGAAATTGGATTCTTCAT+TGG 0.318347 tig0026192:+13885 Msa1427600:CDS
AGGAAATTGGATTCTTCATT+GGG 0.341748 tig0026192:+13886 Msa1427600:CDS
TATTTGGAGGTCGTCTCAAC+TGG 0.344947 tig0026192:+17301 Msa1427600:CDS
TACGTCCCTCTCTCAACTTC+CGG 0.350003 tig0026192:+16213 Msa1427600:CDS
AGTTTGGCGAACTCAATTAA+AGG 0.353674 tig0026192:+15664 Msa1427600:CDS
GTGAAAGAATTTCATAAAGT+TGG 0.354126 tig0026192:+17204 Msa1427600:CDS
ACTTCCAATACTATTAACTA+TGG 0.356115 tig0026192:+12994 Msa1427600:CDS
ATCAGAATAAGAATGGTATT+TGG 0.356883 tig0026192:+17274 Msa1427600:CDS
AAGTTCAGCACAAATCTCTT+TGG 0.358310 tig0026192:+16113 Msa1427600:CDS
GTTTCTGGTGTGGATGATAT+TGG 0.363105 tig0026192:+13911 Msa1427600:CDS
AATCAATGAAATAAGGCATT+TGG 0.365401 tig0026192:+16332 Msa1427600:CDS
AATTGGGAGTCTAATAAATC+TGG 0.367354 tig0026192:+16597 Msa1427600:CDS
AAGAATGGTTATGCTGGTTA+AGG 0.367519 tig0026192:+17944 Msa1427600:CDS
TCCTGGATCTATTCCTATAA+AGG 0.369975 tig0026192:+14286 Msa1427600:CDS
TACTCTCCCACGCAAAAGTA+TGG 0.374781 tig0026192:-19125 None:intergenic
TACCAGTTCAATTCTGTTGA+TGG 0.381799 tig0026192:-13148 None:intergenic
AATTTAATTGGACCTAAAAC+AGG 0.381891 tig0026192:+14719 Msa1427600:CDS
AAGAATTCAGAGCTTATAGT+TGG 0.386894 tig0026192:+13851 Msa1427600:CDS
CTAAGAACTGATATACTGTT+TGG 0.387228 tig0026192:+22190 Msa1427600:three_prime_UTR
AGGGAAGAAATTGGATATGA+TGG 0.388329 tig0026192:+19035 Msa1427600:intron
AGTTTCAAATATTGATTTGA+AGG 0.392152 tig0026192:-22038 None:intergenic
TCTCTATTCGGAAACGGAAC+GGG 0.392449 tig0026192:+20835 Msa1427600:CDS
TAGAGATGATTTAAGAAGTT+GGG 0.393078 tig0026192:+15592 Msa1427600:CDS
ACAGTATATCAGTTCTTAGA+TGG 0.398080 tig0026192:-22186 None:intergenic
TCCTCTGGTAAACTATCTTA+AGG 0.405222 tig0026192:+14688 Msa1427600:CDS
AGTTCAGCACAAATCTCTTT+GGG 0.405517 tig0026192:+16114 Msa1427600:CDS
CAGTTATACATATGGTGAAA+TGG 0.406347 tig0026192:+19160 Msa1427600:CDS
CACAGAGTGAAGAATTCCTT+TGG 0.406443 tig0026192:-19267 None:intergenic
ATCATGTCGGGAACAGGCAC+AGG 0.411759 tig0026192:+16549 Msa1427600:CDS
TCTTTATATGCTACAGTTTG+TGG 0.420943 tig0026192:-15638 None:intergenic
TAGCGGCACTTCTCTCTATT+CGG 0.421298 tig0026192:+20823 Msa1427600:CDS
TGGAGGCAACTCAGGTGATT+CGG 0.422854 tig0026192:-16523 None:intergenic
GGTTCATTTCAGCTTAAGTC+TGG 0.423115 tig0026192:+21997 Msa1427600:three_prime_UTR
TGTAACATCTTCCTTGCAAA+AGG 0.423205 tig0026192:+12831 Msa1427600:CDS
CTTCTAAGAGCATCTCAAAT+GGG 0.423723 tig0026192:-12768 None:intergenic
TTGGCGCTTGTCGGATCAGC+AGG 0.425045 tig0026192:+20233 Msa1427600:CDS
CGGAAGAGACTACAATATTT+GGG 0.425833 tig0026192:+21787 Msa1427600:CDS
TAGCATATAAAGACACAGTT+TGG 0.430766 tig0026192:+15648 Msa1427600:CDS
TCTTTCAATTTCTTGAAGAA+TGG 0.430927 tig0026192:-16412 None:intergenic
GTAGAGATGATTTAAGAAGT+TGG 0.433427 tig0026192:+15591 Msa1427600:CDS
TCCTGTGAATGATCAATGTT+TGG 0.444598 tig0026192:-17901 None:intergenic
CAATGAAGAATCCAATTTCC+TGG 0.444655 tig0026192:-13884 None:intergenic
TCATAAAGAGTATCTCCTTC+CGG 0.451981 tig0026192:-14444 None:intergenic
TCGATGCAGGACGAGGAAAC+TGG 0.453145 tig0026192:+14629 Msa1427600:intron
CTCTCTATTCGGAAACGGAA+CGG 0.458500 tig0026192:+20834 Msa1427600:CDS
GGCCACCATCCCATAACGCC+GGG 0.460663 tig0026192:-20264 None:intergenic
TAGACTCCCAATTAAACCCT+TGG 0.463111 tig0026192:-16587 None:intergenic
TCCCACGCAAAAGTATGGTT+TGG 0.464670 tig0026192:-19120 None:intergenic
TCCCATCAACAGAATTGAAC+TGG 0.465937 tig0026192:+13146 Msa1427600:CDS
TGAGAAACGATATTAAAGAA+TGG 0.466017 tig0026192:+17929 Msa1427600:CDS
GCTTCTAAGAGCATCTCAAA+TGG 0.467244 tig0026192:-12769 None:intergenic
AGAACCATAGTTAATAGTAT+TGG 0.469641 tig0026192:-12998 None:intergenic
GAGATACTCTTTATGAAGTC+AGG 0.472117 tig0026192:+14451 Msa1427600:CDS
GTGAAGAATTTGGCTTGAAA+CGG 0.474351 tig0026192:-12957 None:intergenic
TGATCTGACTTACATTTCAC+TGG 0.474451 tig0026192:+15292 Msa1427600:CDS
GTTATTGACAGTAACTTCCT+TGG 0.481501 tig0026192:-15468 None:intergenic
GATTCCCTCAGTTATACATA+TGG 0.481642 tig0026192:+19152 Msa1427600:CDS
AAGAGACTTCAAAGTTCCTC+TGG 0.481998 tig0026192:+14673 Msa1427600:CDS
AAGAAATTGGATATGATGGA+TGG 0.482079 tig0026192:+19039 Msa1427600:CDS
AGTATGCCAAGGGTTTAATT+GGG 0.484401 tig0026192:+16581 Msa1427600:CDS
CCCCGTGATATGATACCTCC+TGG 0.484490 tig0026192:+14269 Msa1427600:CDS
CTTTCTTCTATACAGGGGAG+GGG 0.484650 tig0026192:+17844 Msa1427600:intron
AATCGCTGAAATCTCATCGC+TGG 0.484867 tig0026192:-14487 None:intergenic
AGAGGTTCTGAAGATACTAT+AGG 0.486290 tig0026192:-16448 None:intergenic
TCTTCAAGAAATTGAAAGAC+TGG 0.486638 tig0026192:+16416 Msa1427600:CDS
CAGAAGATTGAATCTGTTGA+AGG 0.487387 tig0026192:-13098 None:intergenic
ACCAGTTCAATTCTGTTGAT+GGG 0.490268 tig0026192:-13147 None:intergenic
GAGAGTTTGAAATTGAAGAG+TGG 0.492621 tig0026192:-12907 None:intergenic
ATGTGAGTATTGGCGCTTGT+CGG 0.492772 tig0026192:+20224 Msa1427600:CDS
GCTAAAGAACTAGCATCTCT+TGG 0.494064 tig0026192:+16648 Msa1427600:CDS
CTCTACAAACTCCCCAATGA+AGG 0.495764 tig0026192:-15574 None:intergenic
AATGGTAGCTAATCTGTGGT+AGG 0.496270 tig0026192:-12932 None:intergenic
CACTTCTCTCTATTCGGAAA+CGG 0.499973 tig0026192:+20829 Msa1427600:CDS
TCAAGATAGCAACAGTGAAT+CGG 0.500297 tig0026192:+15388 Msa1427600:CDS
TAAAATTACCAAATCAGAAA+GGG 0.504939 tig0026192:+21664 Msa1427600:CDS
AGACTACAATATTTGGGAGC+TGG 0.510378 tig0026192:+21793 Msa1427600:CDS
GTGTTTATAAGATTAGATCA+AGG 0.510606 tig0026192:+13818 Msa1427600:CDS
CGATCTGTTATGTAGCCAAA+AGG 0.511112 tig0026192:+16078 Msa1427600:intron
TCCTCACTCATAGGGACATA+GGG 0.511929 tig0026192:+15318 Msa1427600:CDS
CTCGGAGAAAGCTGGAACAG+AGG 0.512519 tig0026192:-16466 None:intergenic
CACAAACAAACCTGAAAATG+TGG 0.513742 tig0026192:-17351 None:intergenic
ATGATAGGTGGTCGTGGTGA+TGG 0.513841 tig0026192:-12856 None:intergenic
ATAGCTTCCTCGGAGAAAGC+TGG 0.514012 tig0026192:-16474 None:intergenic
ATATCTCATTGCCTTACCAT+AGG 0.516197 tig0026192:+21879 Msa1427600:three_prime_UTR
TCCAGGAGGTATCATATCAC+GGG 0.519553 tig0026192:-14270 None:intergenic
TAGCCAAAAGGAAGTGGAAA+GGG 0.521578 tig0026192:+16090 Msa1427600:intron
ACTCTATCAGTGTCTCCGTT+AGG 0.521785 tig0026192:+15489 Msa1427600:CDS
CATTGGAAAGATGTGAGTAT+TGG 0.524075 tig0026192:+20214 Msa1427600:CDS
CCAATTATACAATAAGCCTA+TGG 0.524563 tig0026192:-21895 None:intergenic
GATGATGATGATTTCTTCAA+AGG 0.524610 tig0026192:-14420 None:intergenic
ATCAAGATGCACACAGGCAG+AGG 0.525851 tig0026192:+19189 Msa1427600:CDS
AGCTAATACTAAGAAGCAAA+AGG 0.526972 tig0026192:+12789 Msa1427600:CDS
GTTATGTAGCCAAAAGGAAG+TGG 0.527882 tig0026192:+16084 Msa1427600:intron
ATAGTTAATAGTATTGGAAG+TGG 0.528099 tig0026192:-12992 None:intergenic
TAATCTGCAGGTGGAGGGAA+AGG 0.530804 tig0026192:+13796 Msa1427600:intron
TTCCTCACTCATAGGGACAT+AGG 0.531155 tig0026192:+15317 Msa1427600:CDS
ACAGGCAGAGGATCGTTGAC+TGG 0.534572 tig0026192:+19201 Msa1427600:CDS
GGTATTTGGAACATATTTGG+AGG 0.534787 tig0026192:+17288 Msa1427600:CDS
CACATCCTTCAGTTCATCAA+TGG 0.535296 tig0026192:-17181 None:intergenic
ATATTAAAGAATGGTTATGC+TGG 0.535991 tig0026192:+17938 Msa1427600:CDS
GCTATCTTGAACTTTGTCAT+CGG 0.536017 tig0026192:-15375 None:intergenic
TTATATGCTACAGTTTGTGG+TGG 0.536406 tig0026192:-15635 None:intergenic
GGATTCCACAATAGCTTCCT+CGG 0.538172 tig0026192:-16484 None:intergenic
AGAATTCAGAGCTTATAGTT+GGG 0.539938 tig0026192:+13852 Msa1427600:CDS
GTTTGTGGTGGATGAGGAGC+AGG 0.542061 tig0026192:-15623 None:intergenic
TTAAAATTACCAAATCAGAA+AGG 0.543716 tig0026192:+21663 Msa1427600:CDS
TTTCTCCGAGGAAGCTATTG+TGG 0.544731 tig0026192:+16479 Msa1427600:CDS
AAAGTTGGAATCAAAGTGCT+AGG 0.546749 tig0026192:+17219 Msa1427600:CDS
AGTCTAATAAATCTGGAAGA+TGG 0.547837 tig0026192:+16604 Msa1427600:CDS
AGTGCTGCCGGTGGTACTGC+AGG 0.548738 tig0026192:+19227 Msa1427600:CDS
ATCGCTGAAATCTCATCGCT+GGG 0.549931 tig0026192:-14486 None:intergenic
AATATATGAATTGTAAACAT+AGG 0.550004 tig0026192:-22077 None:intergenic
CTTATTGTATAATTGGATGA+TGG 0.551028 tig0026192:+21902 Msa1427600:three_prime_UTR
TATAATTGGATGATGGTGTC+AGG 0.553125 tig0026192:+21909 Msa1427600:three_prime_UTR
GCATTTGATGTTACAACCAA+AGG 0.553688 tig0026192:+19251 Msa1427600:CDS
TCCAAACATTGATCATTCAC+AGG 0.559398 tig0026192:+17900 Msa1427600:CDS
TAAATCTGGAAGATGGTACA+TGG 0.559670 tig0026192:+16611 Msa1427600:CDS
AAATTCATGGTTAAATAACA+AGG 0.562174 tig0026192:+16179 Msa1427600:CDS
TGTTTATAAGATTAGATCAA+GGG 0.564271 tig0026192:+13819 Msa1427600:CDS
GCTACAGTTTGTGGTGGATG+AGG 0.564756 tig0026192:-15629 None:intergenic
ATCCAGGAGGTATCATATCA+CGG 0.565082 tig0026192:-14271 None:intergenic
CAGAAGTATCATTATAGAGA+AGG 0.565181 tig0026192:+21966 Msa1427600:three_prime_UTR
ACCTTTATAGGAATAGATCC+AGG 0.566563 tig0026192:-14287 None:intergenic
GAAGAAATCATCATCATCAC+CGG 0.568649 tig0026192:+14425 Msa1427600:CDS
GTTGCCAATAACTGAGCTAC+CGG 0.569553 tig0026192:-16232 None:intergenic
TGTAGAACTGCCTTTAACCA+AGG 0.570430 tig0026192:+15451 Msa1427600:CDS
GCTGAGCATCAGAATAAGAA+TGG 0.572411 tig0026192:+17267 Msa1427600:CDS
ATAGTTGGGTGCAATCTACC+AGG 0.573646 tig0026192:+13866 Msa1427600:CDS
ACTCTTTATGAAGTCAGGAT+CGG 0.574850 tig0026192:+14456 Msa1427600:CDS
TATACAATAAGCCTATGGTA+AGG 0.575566 tig0026192:-21890 None:intergenic
AGAACACTGACGGAGTTCCT+GGG 0.576561 tig0026192:-20767 None:intergenic
CAATGAAGGAAAATATCACC+TGG 0.578377 tig0026192:-15560 None:intergenic
GTTGCTATGAAGATCGGTCC+TGG 0.578469 tig0026192:+21716 Msa1427600:CDS
AAATGCACCTGCAGTACCAC+CGG 0.579580 tig0026192:-19234 None:intergenic
TTCATAGAAAACCACGACAC+TGG 0.579904 tig0026192:+20303 Msa1427600:CDS
TGGCCACCATCCCATAACGC+CGG 0.581678 tig0026192:-20265 None:intergenic
GGGTATGAAATAGTATGCCA+AGG 0.581724 tig0026192:+16570 Msa1427600:CDS
TGGTTATGTAAAGGACTACA+TGG 0.581785 tig0026192:+19091 Msa1427600:CDS
CACTCATAGGGACATAGGGC+AGG 0.583880 tig0026192:+15322 Msa1427600:CDS
TGGAGGCTTGACTTTGTCAG+AGG 0.583959 tig0026192:+19059 Msa1427600:CDS
TTCTAAGAGCATCTCAAATG+GGG 0.585396 tig0026192:-12767 None:intergenic
AAATATAATCTGCAGGTGGA+GGG 0.585441 tig0026192:+13791 Msa1427600:intron
GAGTGAAGAGGCAGGCGAAG+AGG 0.586230 tig0026192:+16281 Msa1427600:CDS
GAAAGTTGTAAAGAGTGAAG+AGG 0.588257 tig0026192:+16269 Msa1427600:CDS
ATTATAGAGAAGGTTGCAGA+GGG 0.589865 tig0026192:+21976 Msa1427600:three_prime_UTR
GTTGTAAAGAGTGAAGAGGC+AGG 0.590094 tig0026192:+16273 Msa1427600:CDS
TGTTTCTGAGCATTTCCTAA+CGG 0.590931 tig0026192:-15504 None:intergenic
AGAACTGATATACTGTTTGG+AGG 0.591179 tig0026192:+22193 Msa1427600:three_prime_UTR
CCACCATCCCATAACGCCGG+GGG 0.591813 tig0026192:-20262 None:intergenic
ATGGTAGCTAATCTGTGGTA+GGG 0.591903 tig0026192:-12931 None:intergenic
ACAGGCTTTAGTTTGTCCCA+AGG 0.592504 tig0026192:+14737 Msa1427600:CDS
GTAGCCAAAAGGAAGTGGAA+AGG 0.595926 tig0026192:+16089 Msa1427600:intron
GATTTAGAAACGGATATACC+AGG 0.600340 tig0026192:+15542 Msa1427600:CDS
CTACAATATTTGGGAGCTGG+AGG 0.604343 tig0026192:+21796 Msa1427600:CDS
GATCAATGTTTGGAGCCGCA+TGG 0.607937 tig0026192:-17891 None:intergenic
CTCATTAAATAAATGTTGTG+AGG 0.608339 tig0026192:-15267 None:intergenic
CATTATAGAGAAGGTTGCAG+AGG 0.608423 tig0026192:+21975 Msa1427600:three_prime_UTR
AAGGAAAATAGTCAAGCAGA+AGG 0.609635 tig0026192:+15422 Msa1427600:CDS
GTTGACTGGATTAGTGCTGC+CGG 0.609834 tig0026192:+19215 Msa1427600:CDS
GTGGTGGAGATGCTCATGAT+AGG 0.610657 tig0026192:-12871 None:intergenic
ATGAAAGTAACGGCACGAGA+TGG 0.610843 tig0026192:-20285 None:intergenic
GGGAGGGGCAACAAGAGTAG+TGG 0.612121 tig0026192:+17859 Msa1427600:CDS
ATTTGGAGGTCGTCTCAACT+GGG 0.613014 tig0026192:+17302 Msa1427600:CDS
AAATTGGATATGATGGATGG+AGG 0.615727 tig0026192:+19042 Msa1427600:CDS
CTAGGTGGTTCATAATGACC+AGG 0.616324 tig0026192:-21734 None:intergenic
ATGCTCATGATAGGTGGTCG+TGG 0.617470 tig0026192:-12862 None:intergenic
AGAAGATTGAATCTGTTGAA+GGG 0.618052 tig0026192:-13097 None:intergenic
ATCATAATCAAGATGCACAC+AGG 0.619941 tig0026192:+19183 Msa1427600:CDS
AGGACGAGGAAACTGGCACT+TGG 0.620719 tig0026192:+14636 Msa1427600:intron
TTCGGATTCCAAAACAACCT+CGG 0.621124 tig0026192:-16505 None:intergenic
AGCTACCGGAAGTTGAGAGA+GGG 0.621352 tig0026192:-16218 None:intergenic
CCACGACACTGGTTCTACAC+AGG 0.621703 tig0026192:+20314 Msa1427600:CDS
TCCTTAAGATAGTTTACCAG+AGG 0.626240 tig0026192:-14689 None:intergenic
TGGTACCATTGATGAACTGA+AGG 0.629503 tig0026192:+17176 Msa1427600:CDS
TCATTGGGGAGTTTCTGGTG+TGG 0.629899 tig0026192:+13901 Msa1427600:CDS
GGAGAGAGAAACTCATGGGG+TGG 0.633967 tig0026192:-13042 None:intergenic
AATTCATGGTTAAATAACAA+GGG 0.635549 tig0026192:+16180 Msa1427600:CDS
TTCACCATATGTATAACTGA+GGG 0.635616 tig0026192:-19156 None:intergenic
AAATGGAAATCAGCTTGGGA+CGG 0.636057 tig0026192:+21767 Msa1427600:CDS
TGGTTCAGAGAAAACAGTGG+TGG 0.636081 tig0026192:-12887 None:intergenic
GAAGATACTATAGGCTTCAG+CGG 0.639584 tig0026192:-16439 None:intergenic
CTCTGTTCCAGCTTTCTCCG+AGG 0.640312 tig0026192:+16467 Msa1427600:CDS
CATTGATGAACTGAAGGATG+TGG 0.641184 tig0026192:+17182 Msa1427600:CDS
GCCCTATGTCCCTATGAGTG+AGG 0.641401 tig0026192:-15319 None:intergenic
TTTCACCATATGTATAACTG+AGG 0.642730 tig0026192:-19157 None:intergenic
AAATCATCATCATCACCGGA+AGG 0.643044 tig0026192:+14429 Msa1427600:CDS
GAGCTACCGGAAGTTGAGAG+AGG 0.643646 tig0026192:-16219 None:intergenic
TGTGGTGGATGAGGAGCAGG+TGG 0.645049 tig0026192:-15620 None:intergenic
ATGTGGTCAAAGAACACTGA+CGG 0.646715 tig0026192:-20777 None:intergenic
ACAAACAAACCTGAAAATGT+GGG 0.647794 tig0026192:-17350 None:intergenic
GGTTAATGGTAGCTAATCTG+TGG 0.652438 tig0026192:-12936 None:intergenic
CCCCACGGAAAAGAAATGCA+AGG 0.652968 tig0026192:+20723 Msa1427600:CDS
GGTATGAAATAGTATGCCAA+GGG 0.653817 tig0026192:+16571 Msa1427600:CDS
TCTGGTAAACTATCTTAAGG+AGG 0.654888 tig0026192:+14691 Msa1427600:CDS
GGAAGCTATTGTGGAATCCG+AGG 0.655431 tig0026192:+16488 Msa1427600:CDS
CTGGTGTGGATGATATTGGA+AGG 0.663725 tig0026192:+13915 Msa1427600:CDS
GGAAATTGGATTCTTCATTG+GGG 0.663839 tig0026192:+13887 Msa1427600:CDS
GCCACCATCCCATAACGCCG+GGG 0.667840 tig0026192:-20263 None:intergenic
CTCAGTTATTGGCAACAGAG+AGG 0.668523 tig0026192:+16239 Msa1427600:CDS
CCTGTGTAGAACCAGTGTCG+TGG 0.669185 tig0026192:-20314 None:intergenic
GCTTATACTCTTACTCACCC+AGG 0.670081 tig0026192:+20750 Msa1427600:CDS
TCATGTCGGGAACAGGCACA+GGG 0.672922 tig0026192:+16550 Msa1427600:CDS
CACCATCCCATAACGCCGGG+GGG 0.673339 tig0026192:-20261 None:intergenic
TTGGATGATGGTGTCAGGTG+TGG 0.674216 tig0026192:+21914 Msa1427600:three_prime_UTR
TCTAAGAGCATCTCAAATGG+GGG 0.684586 tig0026192:-12766 None:intergenic
GTGGAGATGCTCATGATAGG+TGG 0.684639 tig0026192:-12868 None:intergenic
CCAGGAGGTATCATATCACG+GGG 0.685523 tig0026192:-14269 None:intergenic
GGCACTTGGTATCAACACAA+AGG 0.687243 tig0026192:+14650 Msa1427600:CDS
GACTGGATTAGTGCTGCCGG+TGG 0.691174 tig0026192:+19218 Msa1427600:CDS
TGGCGCTTGTCGGATCAGCA+GGG 0.692297 tig0026192:+20234 Msa1427600:CDS
GGAGGTATCATATCACGGGG+TGG 0.712340 tig0026192:-14266 None:intergenic
GGTCATTGGAGATTTCCCCA+CGG 0.723859 tig0026192:+20708 Msa1427600:CDS
TTTGGAGAGAGAAACTCATG+GGG 0.732015 tig0026192:-13045 None:intergenic
TAGTGGAGATAGTTTCCATG+CGG 0.748696 tig0026192:+17876 Msa1427600:CDS
GAGTGGTTCAGAGAAAACAG+TGG 0.759302 tig0026192:-12890 None:intergenic
TTTATAGGAATAGATCCAGG+AGG 0.764420 tig0026192:-14284 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTATTATTAATAA+AGG - tig0026192:20033-20052 None:intergenic 0.0%
!!! ATATGTATATATCAAATTTT+TGG + tig0026192:13172-13191 Msa1427600:intron 10.0%
!!! AAAAATTATGATTTTTATAG+TGG + tig0026192:13247-13266 Msa1427600:intron 10.0%
!! GATTAAATAAATTGATTAAA+AGG - tig0026192:15234-15253 None:intergenic 10.0%
!! AATAGATAAATCTTATAATA+TGG + tig0026192:15806-15825 Msa1427600:intron 10.0%
!!! AATTTTACTTTTTTTTTTAG+GGG - tig0026192:15962-15981 None:intergenic 10.0%
!! TTTGAATTATATATTAAGAT+TGG + tig0026192:16015-16034 Msa1427600:intron 10.0%
!! ATATTATAAATCTACAAAAA+TGG - tig0026192:20485-20504 None:intergenic 10.0%
!!! TATATATCAAATTTTTGGAT+TGG + tig0026192:13177-13196 Msa1427600:intron 15.0%
!!! AAATCATAATTTTTTCATCT+GGG - tig0026192:13241-13260 None:intergenic 15.0%
!!! AAAATCATAATTTTTTCATC+TGG - tig0026192:13242-13261 None:intergenic 15.0%
!! GAAATAGTAAAAATGTTAAA+GGG + tig0026192:13269-13288 Msa1427600:intron 15.0%
!!! AATTTTGTTTTGTATAAATG+TGG + tig0026192:13339-13358 Msa1427600:intron 15.0%
!!! ATCTACTTCTAAAATAAAAA+GGG - tig0026192:13722-13741 None:intergenic 15.0%
!!! TATCTACTTCTAAAATAAAA+AGG - tig0026192:13723-13742 None:intergenic 15.0%
!!! TAGATATATATTTTAGTGTT+TGG + tig0026192:13741-13760 Msa1427600:intron 15.0%
!!! AGATTATATTAATTTGTAAC+AGG + tig0026192:14130-14149 Msa1427600:intron 15.0%
!!! AAATATTTTGGATTTAGAAA+CGG + tig0026192:15532-15551 Msa1427600:CDS 15.0%
!! AAAAATAGAAAACGAAAAAA+CGG - tig0026192:15697-15716 None:intergenic 15.0%
!! TATTACGATTTAAATAAATG+CGG - tig0026192:15790-15809 None:intergenic 15.0%
!! TTAAGATAAATGAAAATTCA+TGG + tig0026192:16166-16185 Msa1427600:CDS 15.0%
!!! TATTTCATTGATTATTTCAT+TGG - tig0026192:16325-16344 None:intergenic 15.0%
!! ATGAAATAATCAATGAAATA+AGG + tig0026192:16325-16344 Msa1427600:CDS 15.0%
!! TTTAAATTATATAAATCCCT+TGG - tig0026192:16732-16751 None:intergenic 15.0%
!!! CTACTTTTTAAAATTATTTC+CGG - tig0026192:16858-16877 None:intergenic 15.0%
!! TAATATTCATTAATGTGTAT+AGG - tig0026192:18951-18970 None:intergenic 15.0%
!! TGTTTATAATTACACTATAA+TGG - tig0026192:20520-20539 None:intergenic 15.0%
!!! TATCATAAAATTTCTTTTGA+AGG + tig0026192:20686-20705 Msa1427600:intron 15.0%
!!! ATCATAAAATTTCTTTTGAA+GGG + tig0026192:20687-20706 Msa1427600:intron 15.0%
!! TTAAAATGAATACATATTTG+AGG + tig0026192:21292-21311 Msa1427600:intron 15.0%
!!! AAATATTTTCACAAAGTAAA+CGG + tig0026192:21328-21347 Msa1427600:intron 15.0%
!!! ATTCATAAATCTTTGAAAAT+AGG - tig0026192:21491-21510 None:intergenic 15.0%
!! AATATATGAATTGTAAACAT+AGG - tig0026192:22080-22099 None:intergenic 15.0%
!! GGAAATAGTAAAAATGTTAA+AGG + tig0026192:13268-13287 Msa1427600:intron 20.0%
!!! ATTGTGACTTTCTTTTTTAT+GGG - tig0026192:13629-13648 None:intergenic 20.0%
!!! TATTGTGACTTTCTTTTTTA+TGG - tig0026192:13630-13649 None:intergenic 20.0%
!! ATAAAAAGGGAAAATAAGTA+AGG - tig0026192:13709-13728 None:intergenic 20.0%
!! TGTTTATAAGATTAGATCAA+GGG + tig0026192:13819-13838 Msa1427600:CDS 20.0%
!! GAAAATAAAACCATGATATA+GGG - tig0026192:14833-14852 None:intergenic 20.0%
!! AGAAAATAAAACCATGATAT+AGG - tig0026192:14834-14853 None:intergenic 20.0%
!!! CATGGTTTTATTTTCTTTTA+TGG + tig0026192:14838-14857 Msa1427600:intron 20.0%
!!! CGATTTGAAATATAACAATA+TGG + tig0026192:15050-15069 Msa1427600:intron 20.0%
!! TTAAAATTCGAATTAATGTC+AGG - tig0026192:15115-15134 None:intergenic 20.0%
!!! AGAAACAGCTAAAAATATTT+TGG + tig0026192:15520-15539 Msa1427600:CDS 20.0%
!! AAATTCATGGTTAAATAACA+AGG + tig0026192:16179-16198 Msa1427600:CDS 20.0%
!! AATTCATGGTTAAATAACAA+GGG + tig0026192:16180-16199 Msa1427600:CDS 20.0%
!! TGAAATAATGAGATCTTTAA+GGG - tig0026192:16776-16795 None:intergenic 20.0%
!! ATGAAATAATGAGATCTTTA+AGG - tig0026192:16777-16796 None:intergenic 20.0%
!!! TAACTGTTATTTTATATCTC+AGG + tig0026192:17151-17170 Msa1427600:intron 20.0%
!! AATATTCTTTCTTCTATACA+GGG + tig0026192:17838-17857 Msa1427600:intron 20.0%
!!! ATTCATATTTTGTTTAGTCA+TGG + tig0026192:18045-18064 Msa1427600:intron 20.0%
!! TGAAGGAAAATAAATTGAAA+GGG - tig0026192:18773-18792 None:intergenic 20.0%
!! ATGAAGGAAAATAAATTGAA+AGG - tig0026192:18774-18793 None:intergenic 20.0%
!! AACAGAAAACAGTTAAATAA+GGG - tig0026192:18924-18943 None:intergenic 20.0%
!! AAACAGAAAACAGTTAAATA+AGG - tig0026192:18925-18944 None:intergenic 20.0%
!! ATTGTAAACAAATTCCAATA+AGG - tig0026192:19432-19451 None:intergenic 20.0%
!!! TGGGTATAATTTATTTTTTG+AGG + tig0026192:19926-19945 Msa1427600:intron 20.0%
!!! TTACTAAGCTAATTTTGAAA+GGG - tig0026192:20350-20369 None:intergenic 20.0%
!!! ATTACTAAGCTAATTTTGAA+AGG - tig0026192:20351-20370 None:intergenic 20.0%
!! TTTATATAAGTAGTAGTGAA+AGG + tig0026192:20559-20578 Msa1427600:intron 20.0%
!! TTATATAAGTAGTAGTGAAA+GGG + tig0026192:20560-20579 Msa1427600:intron 20.0%
!!! TTTTATAGTGAGAAAAAATG+TGG - tig0026192:20797-20816 None:intergenic 20.0%
!! TCACTATAAAAATGAAATAG+CGG + tig0026192:20806-20825 Msa1427600:CDS 20.0%
!! ACTGAAATTATCTAATTCAA+TGG + tig0026192:20992-21011 Msa1427600:intron 20.0%
!! AATTATCTAATTCAATGGTT+TGG + tig0026192:20997-21016 Msa1427600:intron 20.0%
!!! AATGATGAAAACAATTCTTT+TGG - tig0026192:21205-21224 None:intergenic 20.0%
!!! AATATTTTCACAAAGTAAAC+GGG + tig0026192:21329-21348 Msa1427600:intron 20.0%
!!! ATTATTTTCTCATATCAAGT+AGG - tig0026192:21403-21422 None:intergenic 20.0%
!! TTAAAATTACCAAATCAGAA+AGG + tig0026192:21663-21682 Msa1427600:CDS 20.0%
!! TAAAATTACCAAATCAGAAA+GGG + tig0026192:21664-21683 Msa1427600:CDS 20.0%
!!! AGATATACAAGATTTTCTAA+AGG - tig0026192:21865-21884 None:intergenic 20.0%
!!! AGTTTCAAATATTGATTTGA+AGG - tig0026192:22041-22060 None:intergenic 20.0%
!! TCAATTACTTCAAAAGTTTA+TGG - tig0026192:22161-22180 None:intergenic 20.0%
!!! TAAACTTTTGAAGTAATTGA+TGG + tig0026192:22161-22180 Msa1427600:three_prime_UTR 20.0%
!!! AAACTTTTGAAGTAATTGAT+GGG + tig0026192:22162-22181 Msa1427600:three_prime_UTR 20.0%
!! ATAGTTAATAGTATTGGAAG+TGG - tig0026192:12995-13014 None:intergenic 25.0%
! ACTTCCAATACTATTAACTA+TGG + tig0026192:12994-13013 Msa1427600:CDS 25.0%
! AGAACCATAGTTAATAGTAT+TGG - tig0026192:13001-13020 None:intergenic 25.0%
!! GTAGCAAAAGTTTCAAATTT+TGG - tig0026192:13066-13085 None:intergenic 25.0%
! GTATAAATGTGGTAAAAGTT+TGG + tig0026192:13350-13369 Msa1427600:intron 25.0%
!!! ATCTTTTCTCCTTACTTTTT+TGG + tig0026192:13664-13683 Msa1427600:intron 25.0%
! TTACTTGAAATATAATCTGC+AGG + tig0026192:13784-13803 Msa1427600:intron 25.0%
! GTGTTTATAAGATTAGATCA+AGG + tig0026192:13818-13837 Msa1427600:CDS 25.0%
! TTGAATCGGAAGAAAAAAAA+CGG + tig0026192:13988-14007 Msa1427600:intron 25.0%
! AAGTTGACAAAAAAAATAGC+CGG + tig0026192:14022-14041 Msa1427600:intron 25.0%
! AAGTTTAGGTAATGATTCAT+TGG + tig0026192:14051-14070 Msa1427600:intron 25.0%
! AAACTATTGTCTACCTTTAT+AGG - tig0026192:14302-14321 None:intergenic 25.0%
! TCATACTTAAACATTCTACA+TGG - tig0026192:14368-14387 None:intergenic 25.0%
! AAGTATGAAGTGAAAATTTC+AGG + tig0026192:14380-14399 Msa1427600:intron 25.0%
!! AGCGATTAATTTTGTTCTTA+AGG + tig0026192:14503-14522 Msa1427600:CDS 25.0%
! AATTTAATTGGACCTAAAAC+AGG + tig0026192:14719-14738 Msa1427600:CDS 25.0%
! ATATAGAAACAGGAAACAAT+TGG - tig0026192:14908-14927 None:intergenic 25.0%
! TGAAAGCAATATATAGAAAC+AGG - tig0026192:14918-14937 None:intergenic 25.0%
!! TCAGAAAAAAGAAATTTGCT+TGG + tig0026192:15087-15106 Msa1427600:intron 25.0%
! CTCATTAAATAAATGTTGTG+AGG - tig0026192:15270-15289 None:intergenic 25.0%
! TAGAGATGATTTAAGAAGTT+GGG + tig0026192:15592-15611 Msa1427600:CDS 25.0%
! TTTCAACTCTATTGTTTCAT+TGG + tig0026192:15723-15742 Msa1427600:intron 25.0%
! ATATAAAAGAGGAAGATAGA+AGG - tig0026192:15839-15858 None:intergenic 25.0%
! CAACTTCAGTAATATAAAAG+AGG - tig0026192:15850-15869 None:intergenic 25.0%
!! AATCAATGAAATAAGGCATT+TGG + tig0026192:16332-16351 Msa1427600:CDS 25.0%
! TCTTTCAATTTCTTGAAGAA+TGG - tig0026192:16415-16434 None:intergenic 25.0%
! AATCATACATCTTTGCAAAT+AGG + tig0026192:17116-17135 Msa1427600:intron 25.0%
!!! GTTATTTTATATCTCAGGTA+TGG + tig0026192:17156-17175 Msa1427600:intron 25.0%
! GTGAAAGAATTTCATAAAGT+TGG + tig0026192:17204-17223 Msa1427600:CDS 25.0%
! ATCAGAATAAGAATGGTATT+TGG + tig0026192:17274-17293 Msa1427600:CDS 25.0%
!! AATGGTATTTGGAACATATT+TGG + tig0026192:17285-17304 Msa1427600:CDS 25.0%
! CTTGCTGACAATATAAAAAA+AGG - tig0026192:17411-17430 None:intergenic 25.0%
! GAATATTCTTTCTTCTATAC+AGG + tig0026192:17837-17856 Msa1427600:intron 25.0%
! ATATTCTTTCTTCTATACAG+GGG + tig0026192:17839-17858 Msa1427600:intron 25.0%
! TGAGAAACGATATTAAAGAA+TGG + tig0026192:17929-17948 Msa1427600:CDS 25.0%
! ATATTAAAGAATGGTTATGC+TGG + tig0026192:17938-17957 Msa1427600:CDS 25.0%
! GCTGAAATTAAGTAAAGAAA+TGG + tig0026192:18502-18521 Msa1427600:intron 25.0%
! TAAAGAAATGGATCAAACAA+TGG + tig0026192:18514-18533 Msa1427600:intron 25.0%
! GAAGGAAAATAAATTGAAAG+GGG - tig0026192:18772-18791 None:intergenic 25.0%
! AATATTCTAGATGATACCTT+TGG + tig0026192:18869-18888 Msa1427600:intron 25.0%
! ATATTCTAGATGATACCTTT+GGG + tig0026192:18870-18889 Msa1427600:intron 25.0%
! ACAGAAAACAGTTAAATAAG+GGG - tig0026192:18923-18942 None:intergenic 25.0%
!! TCTAATTCTGTTTCATTTTC+AGG + tig0026192:19015-19034 Msa1427600:intron 25.0%
!! CTAATTCTGTTTCATTTTCA+GGG + tig0026192:19016-19035 Msa1427600:intron 25.0%
! ATTGTAACTTCACTGTTATT+GGG - tig0026192:19507-19526 None:intergenic 25.0%
!!! AATACGTTTTGATTTATCAC+TGG - tig0026192:19709-19728 None:intergenic 25.0%
!!! GTTTAATTTGCTTTTGTGTT+AGG - tig0026192:19831-19850 None:intergenic 25.0%
! TATACTGAATAGTATACTAC+TGG + tig0026192:19906-19925 Msa1427600:intron 25.0%
! ATACTGAATAGTATACTACT+GGG + tig0026192:19907-19926 Msa1427600:intron 25.0%
!!! ATTTTTAAGTATCCTTAGAG+AGG - tig0026192:20086-20105 None:intergenic 25.0%
! TGTCTAGTAAAAAGCAAAAA+TGG - tig0026192:20134-20153 None:intergenic 25.0%
! GATGACATTTCATTTGAATT+TGG + tig0026192:20179-20198 Msa1427600:intron 25.0%
!!! TACTAAGCTAATTTTGAAAG+GGG - tig0026192:20349-20368 None:intergenic 25.0%
! CGCATCAAAACAATATTTAA+TGG - tig0026192:20661-20680 None:intergenic 25.0%
! GATAAAACACGAAAAACATA+AGG + tig0026192:21046-21065 Msa1427600:intron 25.0%
!!! TTCACACAAATTTTAGGAAA+AGG - tig0026192:21105-21124 None:intergenic 25.0%
!! GTAAAGTTCACACAAATTTT+AGG - tig0026192:21111-21130 None:intergenic 25.0%
!! ATATTTTCACAAAGTAAACG+GGG + tig0026192:21330-21349 Msa1427600:intron 25.0%
! TAACACCAAGGAAAAAATTT+AGG - tig0026192:21356-21375 None:intergenic 25.0%
!!! AAATTTTTTCCTTGGTGTTA+TGG + tig0026192:21356-21375 Msa1427600:intron 25.0%
! CTTATTGTATAATTGGATGA+TGG + tig0026192:21902-21921 Msa1427600:three_prime_UTR 25.0%
!! CAAAAAGTGTATTGAACAAT+TGG + tig0026192:22118-22137 Msa1427600:three_prime_UTR 25.0%
AGCTAATACTAAGAAGCAAA+AGG + tig0026192:12789-12808 Msa1427600:CDS 30.0%
TTAACTATGGTTCTTGTTCT+TGG + tig0026192:13007-13026 Msa1427600:CDS 30.0%
AGAAGATTGAATCTGTTGAA+GGG - tig0026192:13100-13119 None:intergenic 30.0%
!! TTGGATTGGAACATTGTTTT+TGG + tig0026192:13191-13210 Msa1427600:intron 30.0%
!! TTGGTTTGTAGAGAATATTC+TGG + tig0026192:13210-13229 Msa1427600:intron 30.0%
AAAAGCTGAAATTGTTAGAC+CGG - tig0026192:13472-13491 None:intergenic 30.0%
!!! TTTCTCCTTACTTTTTTGGA+AGG + tig0026192:13668-13687 Msa1427600:intron 30.0%
!!! TTCTCCTTACTTTTTTGGAA+GGG + tig0026192:13669-13688 Msa1427600:intron 30.0%
AAAACCCTTCCAAAAAAGTA+AGG - tig0026192:13676-13695 None:intergenic 30.0%
!! ATTTTAGTGTTTGGCATTGA+TGG + tig0026192:13750-13769 Msa1427600:intron 30.0%
AAGAATTCAGAGCTTATAGT+TGG + tig0026192:13851-13870 Msa1427600:CDS 30.0%
AGAATTCAGAGCTTATAGTT+GGG + tig0026192:13852-13871 Msa1427600:CDS 30.0%
AGGAAATTGGATTCTTCATT+GGG + tig0026192:13886-13905 Msa1427600:CDS 30.0%
! TGGAAGGTACATGTTAAATA+AGG + tig0026192:13931-13950 Msa1427600:intron 30.0%
CATATCGAGATTCATTGAAT+CGG + tig0026192:13974-13993 Msa1427600:intron 30.0%
AGTTGACAAAAAAAATAGCC+GGG + tig0026192:14023-14042 Msa1427600:intron 30.0%
TTTGTAACAGGATAAACACT+AGG + tig0026192:14142-14161 Msa1427600:intron 30.0%
TTGTAACAGGATAAACACTA+GGG + tig0026192:14143-14162 Msa1427600:intron 30.0%
! GATGATGATGATTTCTTCAA+AGG - tig0026192:14423-14442 None:intergenic 30.0%
ATGTCTATACAGTTAGCAAT+TGG + tig0026192:14529-14548 Msa1427600:intron 30.0%
AAGGAGGATGCTAATTTAAT+TGG + tig0026192:14707-14726 Msa1427600:CDS 30.0%
AGTGATTTCAAAATCACCTT+GGG - tig0026192:14756-14775 None:intergenic 30.0%
CTTAAATTTGCCCTATATCA+TGG + tig0026192:14820-14839 Msa1427600:intron 30.0%
TGTGAGATAGAATGTATCAT+AGG - tig0026192:14882-14901 None:intergenic 30.0%
!!! TTTGCTGCACTAGTTTTTAA+TGG - tig0026192:14977-14996 None:intergenic 30.0%
TTGAAAATTGAGAAGACAGA+TGG - tig0026192:15169-15188 None:intergenic 30.0%
TGAATCGGAAAATCCAAAAA+AGG + tig0026192:15403-15422 Msa1427600:CDS 30.0%
! GCTTGACTATTTTCCTTTTT+TGG - tig0026192:15419-15438 None:intergenic 30.0%
! AGGTGATATTTTCCTTCATT+GGG + tig0026192:15562-15581 Msa1427600:CDS 30.0%
GTAGAGATGATTTAAGAAGT+TGG + tig0026192:15591-15610 Msa1427600:CDS 30.0%
TCTTTATATGCTACAGTTTG+TGG - tig0026192:15641-15660 None:intergenic 30.0%
TAGCATATAAAGACACAGTT+TGG + tig0026192:15648-15667 Msa1427600:CDS 30.0%
! GAATCAGATCTAGAATCTTA+TGG - tig0026192:15765-15784 None:intergenic 30.0%
TCTTCAAGAAATTGAAAGAC+TGG + tig0026192:16416-16435 Msa1427600:CDS 30.0%
AATTGGGAGTCTAATAAATC+TGG + tig0026192:16597-16616 Msa1427600:CDS 30.0%
AGTCTAATAAATCTGGAAGA+TGG + tig0026192:16604-16623 Msa1427600:CDS 30.0%
GAATCAATGATAATACCATC+AGG - tig0026192:17035-17054 None:intergenic 30.0%
ACAAACAAACCTGAAAATGT+GGG - tig0026192:17353-17372 None:intergenic 30.0%
!!! ATTTTCAGGTTTGTTTGTGA+GGG + tig0026192:17355-17374 Msa1427600:intron 30.0%
!!! GTTTTGACATAAAGTATCGA+AGG - tig0026192:17517-17536 None:intergenic 30.0%
ACAACATAGAATGATATGCT+AGG - tig0026192:17672-17691 None:intergenic 30.0%
GACTAACGAAAATGAGAATT+TGG - tig0026192:17978-17997 None:intergenic 30.0%
TAGTCCAAAATGTTGTCAAT+TGG + tig0026192:17993-18012 Msa1427600:intron 30.0%
! GTTACCAATTGACAACATTT+TGG - tig0026192:18000-18019 None:intergenic 30.0%
TTGTTTAGTCATGGTTTCAT+TGG + tig0026192:18054-18073 Msa1427600:intron 30.0%
CATGATCTGGAAATAGTAAA+AGG - tig0026192:18300-18319 None:intergenic 30.0%
AATTTCAGCTTCTGAATTCA+GGG - tig0026192:18491-18510 None:intergenic 30.0%
TAATTTCAGCTTCTGAATTC+AGG - tig0026192:18492-18511 None:intergenic 30.0%
GCTTAGTAGTATAAATAGTG+AGG - tig0026192:18676-18695 None:intergenic 30.0%
GATATATAAAGAGTGAGGTA+GGG - tig0026192:18723-18742 None:intergenic 30.0%
GTAAGGATATATAAAGAGTG+AGG - tig0026192:18728-18747 None:intergenic 30.0%
TTGTAATAAAGAGAGTGGTA+AGG - tig0026192:18745-18764 None:intergenic 30.0%
GCTACAATTACATGAAATGA+AGG - tig0026192:18790-18809 None:intergenic 30.0%
ATACAATGAAAACACTGTGT+AGG - tig0026192:18844-18863 None:intergenic 30.0%
TATTCTAGATGATACCTTTG+GGG + tig0026192:18871-18890 Msa1427600:intron 30.0%
AGAAAACAGTTAAATAAGGG+GGG - tig0026192:18921-18940 None:intergenic 30.0%
CAGAAAACAGTTAAATAAGG+GGG - tig0026192:18922-18941 None:intergenic 30.0%
!! TTCATTTTCAGGGAAGAAAT+TGG + tig0026192:19026-19045 Msa1427600:intron 30.0%
! AAGAAATTGGATATGATGGA+TGG + tig0026192:19039-19058 Msa1427600:CDS 30.0%
TTCACCATATGTATAACTGA+GGG - tig0026192:19159-19178 None:intergenic 30.0%
TTTCACCATATGTATAACTG+AGG - tig0026192:19160-19179 None:intergenic 30.0%
CAGTTATACATATGGTGAAA+TGG + tig0026192:19160-19179 Msa1427600:CDS 30.0%
GTAAACAAATTCCAATAAGG+TGG - tig0026192:19429-19448 None:intergenic 30.0%
TTGTAACTTCACTGTTATTG+GGG - tig0026192:19506-19525 None:intergenic 30.0%
CATTGTAACTTCACTGTTAT+TGG - tig0026192:19508-19527 None:intergenic 30.0%
AATGCTTCTAGTGAAAGAAT+TGG + tig0026192:19530-19549 Msa1427600:intron 30.0%
TCATGAGTTCAAATCCTAAA+CGG + tig0026192:19626-19645 Msa1427600:intron 30.0%
!! AATTTGCTTTTGTGTTAGGT+GGG - tig0026192:19827-19846 None:intergenic 30.0%
!!! TAATTTGCTTTTGTGTTAGG+TGG - tig0026192:19828-19847 None:intergenic 30.0%
TATACTATCCTCCAATAAAG+GGG - tig0026192:19890-19909 None:intergenic 30.0%
GTATACTATCCTCCAATAAA+GGG - tig0026192:19891-19910 None:intergenic 30.0%
AGTATACTATCCTCCAATAA+AGG - tig0026192:19892-19911 None:intergenic 30.0%
!!! ATTTATTTTTTGAGGCTCCT+TGG + tig0026192:19934-19953 Msa1427600:intron 30.0%
!!! TTTATTTTTTGAGGCTCCTT+GGG + tig0026192:19935-19954 Msa1427600:intron 30.0%
CAAATGAAATGTCATCTAGT+CGG - tig0026192:20175-20194 None:intergenic 30.0%
! GTGGTTTTCTATGAAAGTAA+CGG - tig0026192:20298-20317 None:intergenic 30.0%
! GTGGCATTGTTTAAAACAAA+AGG - tig0026192:20413-20432 None:intergenic 30.0%
TAAAACTCGAGATTCTGATT+TGG + tig0026192:20436-20455 Msa1427600:intron 30.0%
!! AATTTCTTTTGAAGGGTCAT+TGG + tig0026192:20694-20713 Msa1427600:intron 30.0%
! CGTTTATGTGGATATTTTCT+GGG + tig0026192:20915-20934 Msa1427600:intron 30.0%
! TGTTTTGCACAAAGTAAATG+AGG - tig0026192:21072-21091 None:intergenic 30.0%
!! TTCTCGTTTTCACTATTTCT+TGG + tig0026192:21531-21550 Msa1427600:intron 30.0%
AGATGGTCAATTATTTGCAT+TGG + tig0026192:21605-21624 Msa1427600:intron 30.0%
CCTTGAACATGAAAATAGAA+AGG - tig0026192:21643-21662 None:intergenic 30.0%
! CCTTTCTATTTTCATGTTCA+AGG + tig0026192:21640-21659 Msa1427600:intron 30.0%
GAAAAAGTTGCTATGAAGAT+CGG + tig0026192:21710-21729 Msa1427600:CDS 30.0%
TATACAATAAGCCTATGGTA+AGG - tig0026192:21893-21912 None:intergenic 30.0%
CCAATTATACAATAAGCCTA+TGG - tig0026192:21898-21917 None:intergenic 30.0%
CCATAGGCTTATTGTATAAT+TGG + tig0026192:21895-21914 Msa1427600:three_prime_UTR 30.0%
!! CAGAAGTATCATTATAGAGA+AGG + tig0026192:21966-21985 Msa1427600:three_prime_UTR 30.0%
ACAGTATATCAGTTCTTAGA+TGG - tig0026192:22189-22208 None:intergenic 30.0%
!! TTCTAAGAGCATCTCAAATG+GGG - tig0026192:12770-12789 None:intergenic 35.0%
!! CTTCTAAGAGCATCTCAAAT+GGG - tig0026192:12771-12790 None:intergenic 35.0%
TGTAACATCTTCCTTGCAAA+AGG + tig0026192:12831-12850 Msa1427600:CDS 35.0%
! GAGAGTTTGAAATTGAAGAG+TGG - tig0026192:12910-12929 None:intergenic 35.0%
!! ATTTGGCTTGAAACGGTTAA+TGG - tig0026192:12953-12972 None:intergenic 35.0%
!! GTGAAGAATTTGGCTTGAAA+CGG - tig0026192:12960-12979 None:intergenic 35.0%
!! TTTTGGAGAGAGAAACTCAT+GGG - tig0026192:13049-13068 None:intergenic 35.0%
!! ATTTTGGAGAGAGAAACTCA+TGG - tig0026192:13050-13069 None:intergenic 35.0%
CAGAAGATTGAATCTGTTGA+AGG - tig0026192:13101-13120 None:intergenic 35.0%
ACCAGTTCAATTCTGTTGAT+GGG - tig0026192:13150-13169 None:intergenic 35.0%
TACCAGTTCAATTCTGTTGA+TGG - tig0026192:13151-13170 None:intergenic 35.0%
! GTAAAAATGTTAAAGGGCGT+TGG + tig0026192:13275-13294 Msa1427600:intron 35.0%
CTTGTGTGTGACTATTCAAT+TGG - tig0026192:13417-13436 None:intergenic 35.0%
ATTGAATAGTCACACACAAG+TGG + tig0026192:13417-13436 Msa1427600:intron 35.0%
TTGAATAGTCACACACAAGT+GGG + tig0026192:13418-13437 Msa1427600:intron 35.0%
CTTGAAATATAATCTGCAGG+TGG + tig0026192:13787-13806 Msa1427600:intron 35.0%
AAATATAATCTGCAGGTGGA+GGG + tig0026192:13791-13810 Msa1427600:intron 35.0%
CAATGAAGAATCCAATTTCC+TGG - tig0026192:13887-13906 None:intergenic 35.0%
CAGGAAATTGGATTCTTCAT+TGG + tig0026192:13885-13904 Msa1427600:CDS 35.0%
GGAAATTGGATTCTTCATTG+GGG + tig0026192:13887-13906 Msa1427600:CDS 35.0%
ATTACCTAAACTTAGTGACC+CGG - tig0026192:14044-14063 None:intergenic 35.0%
TACACTGTAAGCATCTTCAT+TGG - tig0026192:14217-14236 None:intergenic 35.0%
AGTGTAAATCTTGATTGTGC+AGG + tig0026192:14231-14250 Msa1427600:intron 35.0%
GTGTAAATCTTGATTGTGCA+GGG + tig0026192:14232-14251 Msa1427600:intron 35.0%
TTTATAGGAATAGATCCAGG+AGG - tig0026192:14287-14306 None:intergenic 35.0%
TCCTGGATCTATTCCTATAA+AGG + tig0026192:14286-14305 Msa1427600:CDS 35.0%
ACCTTTATAGGAATAGATCC+AGG - tig0026192:14290-14309 None:intergenic 35.0%
GAAGAAATCATCATCATCAC+CGG + tig0026192:14425-14444 Msa1427600:CDS 35.0%
!! TCATAAAGAGTATCTCCTTC+CGG - tig0026192:14447-14466 None:intergenic 35.0%
GAGATACTCTTTATGAAGTC+AGG + tig0026192:14451-14470 Msa1427600:CDS 35.0%
ACTCTTTATGAAGTCAGGAT+CGG + tig0026192:14456-14475 Msa1427600:CDS 35.0%
! TTTTTCCCTCCATTCCAATT+TGG + tig0026192:14597-14616 Msa1427600:intron 35.0%
! TTTTCCCTCCATTCCAATTT+GGG + tig0026192:14598-14617 Msa1427600:intron 35.0%
TCCTCTGGTAAACTATCTTA+AGG + tig0026192:14688-14707 Msa1427600:CDS 35.0%
TCCTTAAGATAGTTTACCAG+AGG - tig0026192:14692-14711 None:intergenic 35.0%
TCTGGTAAACTATCTTAAGG+AGG + tig0026192:14691-14710 Msa1427600:CDS 35.0%
! GACAAACTAAAGCCTGTTTT+AGG - tig0026192:14734-14753 None:intergenic 35.0%
CAGTGATTTCAAAATCACCT+TGG - tig0026192:14757-14776 None:intergenic 35.0%
AAACTAGTGCAGCAAAGAAA+AGG + tig0026192:14981-15000 Msa1427600:intron 35.0%
! ATCTTGTGTCGATAAAAGCT+TGG + tig0026192:15134-15153 Msa1427600:intron 35.0%
TGATCTGACTTACATTTCAC+TGG + tig0026192:15292-15311 Msa1427600:CDS 35.0%
GCTATCTTGAACTTTGTCAT+CGG - tig0026192:15378-15397 None:intergenic 35.0%
TCAAGATAGCAACAGTGAAT+CGG + tig0026192:15388-15407 Msa1427600:CDS 35.0%
AAGGAAAATAGTCAAGCAGA+AGG + tig0026192:15422-15441 Msa1427600:CDS 35.0%
ACAGTAACTTCCTTGGTTAA+AGG - tig0026192:15464-15483 None:intergenic 35.0%
GTTATTGACAGTAACTTCCT+TGG - tig0026192:15471-15490 None:intergenic 35.0%
! TGTTTCTGAGCATTTCCTAA+CGG - tig0026192:15507-15526 None:intergenic 35.0%
GATTTAGAAACGGATATACC+AGG + tig0026192:15542-15561 Msa1427600:CDS 35.0%
CAATGAAGGAAAATATCACC+TGG - tig0026192:15563-15582 None:intergenic 35.0%
! CAGGTGATATTTTCCTTCAT+TGG + tig0026192:15561-15580 Msa1427600:CDS 35.0%
! GGTGATATTTTCCTTCATTG+GGG + tig0026192:15563-15582 Msa1427600:CDS 35.0%
TTATATGCTACAGTTTGTGG+TGG - tig0026192:15638-15657 None:intergenic 35.0%
AGTTTGGCGAACTCAATTAA+AGG + tig0026192:15664-15683 Msa1427600:CDS 35.0%
!! CTTTTGGCTACATAACAGAT+CGG - tig0026192:16080-16099 None:intergenic 35.0%
AAGTTCAGCACAAATCTCTT+TGG + tig0026192:16113-16132 Msa1427600:CDS 35.0%
AGTTCAGCACAAATCTCTTT+GGG + tig0026192:16114-16133 Msa1427600:CDS 35.0%
!! TCTTTGGGAGAAGAATTTTC+AGG + tig0026192:16129-16148 Msa1427600:CDS 35.0%
GAAAGTTGTAAAGAGTGAAG+AGG + tig0026192:16269-16288 Msa1427600:CDS 35.0%
! GAAATAAGGCATTTGGTTAC+TGG + tig0026192:16339-16358 Msa1427600:CDS 35.0%
AATGGTTTCTTGAGCTTCTT+TGG - tig0026192:16397-16416 None:intergenic 35.0%
!! AGAGGTTCTGAAGATACTAT+AGG - tig0026192:16451-16470 None:intergenic 35.0%
GGTATGAAATAGTATGCCAA+GGG + tig0026192:16571-16590 Msa1427600:CDS 35.0%
TAGTATGCCAAGGGTTTAAT+TGG + tig0026192:16580-16599 Msa1427600:CDS 35.0%
AGTATGCCAAGGGTTTAATT+GGG + tig0026192:16581-16600 Msa1427600:CDS 35.0%
TAAATCTGGAAGATGGTACA+TGG + tig0026192:16611-16630 Msa1427600:CDS 35.0%
!! CTCTTGGCTTTACTGTTATT+TGG + tig0026192:16664-16683 Msa1427600:CDS 35.0%
TTGTTTATGTCTACGAAGCA+CGG + tig0026192:16799-16818 Msa1427600:intron 35.0%
TAGATACAAGACCATGTGTT+AGG + tig0026192:16996-17015 Msa1427600:intron 35.0%
TAAGCAATTTGCCTAACACA+TGG - tig0026192:17010-17029 None:intergenic 35.0%
GTGGTGATTTATAAGAGAGT+AGG + tig0026192:17083-17102 Msa1427600:intron 35.0%
! AAAGTTGGAATCAAAGTGCT+AGG + tig0026192:17219-17238 Msa1427600:CDS 35.0%
! GGTATTTGGAACATATTTGG+AGG + tig0026192:17288-17307 Msa1427600:CDS 35.0%
CACAAACAAACCTGAAAATG+TGG - tig0026192:17354-17373 None:intergenic 35.0%
!!! CATTTTCAGGTTTGTTTGTG+AGG + tig0026192:17354-17373 Msa1427600:intron 35.0%
!! AGATGTCTAGTTCCTTTTTG+TGG + tig0026192:17429-17448 Msa1427600:intron 35.0%
ATGGATCTTCAACCACAAAA+AGG - tig0026192:17444-17463 None:intergenic 35.0%
! TTTTTGTGGTTGAAGATCCA+TGG + tig0026192:17443-17462 Msa1427600:intron 35.0%
!! CATAAAGTATCGAAGGTTCT+CGG - tig0026192:17510-17529 None:intergenic 35.0%
! AAAACTCGTCACACATTTTC+AGG + tig0026192:17532-17551 Msa1427600:intron 35.0%
TGTTTCCCTAGCAAATAAAG+TGG + tig0026192:17584-17603 Msa1427600:intron 35.0%
! GTACTCCACTTTATTTGCTA+GGG - tig0026192:17592-17611 None:intergenic 35.0%
! TGTACTCCACTTTATTTGCT+AGG - tig0026192:17593-17612 None:intergenic 35.0%
ATGAACACCACATTTACTTC+AGG + tig0026192:17723-17742 Msa1427600:intron 35.0%
TGTTCATCCTGAAGTAAATG+TGG - tig0026192:17733-17752 None:intergenic 35.0%
TGATACTGCTGTCTTTCTAT+TGG + tig0026192:17809-17828 Msa1427600:intron 35.0%
TCCAAACATTGATCATTCAC+AGG + tig0026192:17900-17919 Msa1427600:CDS 35.0%
TCCTGTGAATGATCAATGTT+TGG - tig0026192:17904-17923 None:intergenic 35.0%
! AAGAATGGTTATGCTGGTTA+AGG + tig0026192:17944-17963 Msa1427600:CDS 35.0%
CATGGTTTCATTGGAAATGT+TGG + tig0026192:18063-18082 Msa1427600:intron 35.0%
GAAATGTTGGAGAATTGAGA+TGG + tig0026192:18076-18095 Msa1427600:intron 35.0%
GACACAATACATAGTTAGTG+AGG - tig0026192:18186-18205 None:intergenic 35.0%
TCGTAGAAGCAGTTTACAAA+GGG - tig0026192:18273-18292 None:intergenic 35.0%
CTATTTCCAGATCATGTAAC+CGG + tig0026192:18304-18323 Msa1427600:intron 35.0%
CATATGTGCATAAGAATGGA+TGG - tig0026192:18348-18367 None:intergenic 35.0%
CATCCATTCTTATGCACATA+TGG + tig0026192:18346-18365 Msa1427600:intron 35.0%
TGGCTCATATTAATTTCACG+TGG + tig0026192:18366-18385 Msa1427600:intron 35.0%
TCTTTGTCTTAGAAACGTTC+TGG + tig0026192:18430-18449 Msa1427600:intron 35.0%
ATTATGATTAAGCAGAGAGG+GGG - tig0026192:18611-18630 None:intergenic 35.0%
CATTATGATTAAGCAGAGAG+GGG - tig0026192:18612-18631 None:intergenic 35.0%
CCATTATGATTAAGCAGAGA+GGG - tig0026192:18613-18632 None:intergenic 35.0%
ACCATTATGATTAAGCAGAG+AGG - tig0026192:18614-18633 None:intergenic 35.0%
! TGATGGATATGCAAGAATAC+TGG - tig0026192:18642-18661 None:intergenic 35.0%
GGATATATAAAGAGTGAGGT+AGG - tig0026192:18724-18743 None:intergenic 35.0%
GTGTGTTGTAATAAAGAGAG+TGG - tig0026192:18750-18769 None:intergenic 35.0%
TAATACGATAACTACCCCAA+AGG - tig0026192:18888-18907 None:intergenic 35.0%
AGGGAAGAAATTGGATATGA+TGG + tig0026192:19035-19054 Msa1427600:intron 35.0%
!! AAATTGGATATGATGGATGG+AGG + tig0026192:19042-19061 Msa1427600:CDS 35.0%
! TTGACTTTGTCAGAGGATTT+TGG + tig0026192:19066-19085 Msa1427600:CDS 35.0%
! TGACTTTGTCAGAGGATTTT+GGG + tig0026192:19067-19086 Msa1427600:CDS 35.0%
!!! ATTTTGGGGTGGTTATGTAA+AGG + tig0026192:19082-19101 Msa1427600:CDS 35.0%
TGGTTATGTAAAGGACTACA+TGG + tig0026192:19091-19110 Msa1427600:CDS 35.0%
GATTCCCTCAGTTATACATA+TGG + tig0026192:19152-19171 Msa1427600:CDS 35.0%
ATCATAATCAAGATGCACAC+AGG + tig0026192:19183-19202 Msa1427600:CDS 35.0%
GCATTTGATGTTACAACCAA+AGG + tig0026192:19251-19270 Msa1427600:CDS 35.0%
AAACTTACTCTTCAATCCTG+TGG + tig0026192:19325-19344 Msa1427600:intron 35.0%
AACTTACTCTTCAATCCTGT+GGG + tig0026192:19326-19345 Msa1427600:intron 35.0%
! TACTAGTTTCACCACCTTAT+TGG + tig0026192:19415-19434 Msa1427600:intron 35.0%
CATGAGTTCAAATCCTAAAC+GGG + tig0026192:19627-19646 Msa1427600:intron 35.0%
ATGAGTTCAAATCCTAAACG+GGG + tig0026192:19628-19647 Msa1427600:intron 35.0%
!! CGGTAGTTATTTTCACCTAT+GGG - tig0026192:19792-19811 None:intergenic 35.0%
!! ACGGTAGTTATTTTCACCTA+TGG - tig0026192:19793-19812 None:intergenic 35.0%
!! ATTTGCTTTTGTGTTAGGTG+GGG - tig0026192:19826-19845 None:intergenic 35.0%
!!! TTATTTTTTGAGGCTCCTTG+GGG + tig0026192:19936-19955 Msa1427600:intron 35.0%
! TTTGAATTTGGCTCCTTTGT+AGG + tig0026192:20191-20210 Msa1427600:intron 35.0%
CATTGGAAAGATGTGAGTAT+TGG + tig0026192:20214-20233 Msa1427600:CDS 35.0%
! AGAATCTCGAGTTTTACTTG+TGG - tig0026192:20432-20451 None:intergenic 35.0%
TCACTCGTATAAGTGTTCAT+TGG + tig0026192:20596-20615 Msa1427600:intron 35.0%
! GCGTTTATGTGGATATTTTC+TGG + tig0026192:20914-20933 Msa1427600:intron 35.0%
! TTATGTGGATATTTTCTGGG+TGG + tig0026192:20918-20937 Msa1427600:intron 35.0%
! GTGAACTTTACTTGCTAACA+AGG + tig0026192:21120-21139 Msa1427600:intron 35.0%
GAAACGAATTGCTAGTTGTA+GGG - tig0026192:21244-21263 None:intergenic 35.0%
TGAAACGAATTGCTAGTTGT+AGG - tig0026192:21245-21264 None:intergenic 35.0%
ATATGGTTTCCATAACACCA+AGG - tig0026192:21368-21387 None:intergenic 35.0%
TGGAAACCATATGCATGTTT+AGG + tig0026192:21376-21395 Msa1427600:intron 35.0%
GGAAACCATATGCATGTTTA+GGG + tig0026192:21377-21396 Msa1427600:intron 35.0%
!!! ACGAGAAAATGTTGTTTTCG+CGG - tig0026192:21518-21537 None:intergenic 35.0%
! CTCTGAAAATGTGCTTTAGA+TGG + tig0026192:21588-21607 Msa1427600:intron 35.0%
ATAAACGTCCCTTTCTGATT+TGG - tig0026192:21675-21694 None:intergenic 35.0%
!! TTCCATTTTTGGGAATCACT+AGG - tig0026192:21755-21774 None:intergenic 35.0%
!! CCAAGCTGATTTCCATTTTT+GGG - tig0026192:21765-21784 None:intergenic 35.0%
CCAAAAATGGAAATCAGCTT+GGG + tig0026192:21763-21782 Msa1427600:CDS 35.0%
ACGGAAGAGACTACAATATT+TGG + tig0026192:21786-21805 Msa1427600:CDS 35.0%
CGGAAGAGACTACAATATTT+GGG + tig0026192:21787-21806 Msa1427600:CDS 35.0%
ATATCTCATTGCCTTACCAT+AGG + tig0026192:21879-21898 Msa1427600:three_prime_UTR 35.0%
! TATAATTGGATGATGGTGTC+AGG + tig0026192:21909-21928 Msa1427600:three_prime_UTR 35.0%
ATTATAGAGAAGGTTGCAGA+GGG + tig0026192:21976-21995 Msa1427600:three_prime_UTR 35.0%
!! GCTTCTAAGAGCATCTCAAA+TGG - tig0026192:12772-12791 None:intergenic 40.0%
ATGGTAGCTAATCTGTGGTA+GGG - tig0026192:12934-12953 None:intergenic 40.0%
AATGGTAGCTAATCTGTGGT+AGG - tig0026192:12935-12954 None:intergenic 40.0%
GGTTAATGGTAGCTAATCTG+TGG - tig0026192:12939-12958 None:intergenic 40.0%
! GAGAGAGAGTGTGAAGAATT+TGG - tig0026192:12970-12989 None:intergenic 40.0%
TTTGGAGAGAGAAACTCATG+GGG - tig0026192:13048-13067 None:intergenic 40.0%
TCCCATCAACAGAATTGAAC+TGG + tig0026192:13146-13165 Msa1427600:CDS 40.0%
!!! AGGGCGTTGGATTTTTATAG+TGG + tig0026192:13288-13307 Msa1427600:intron 40.0%
TGAATAGTCACACACAAGTG+GGG + tig0026192:13419-13438 Msa1427600:intron 40.0%
! TTTCAGCTTTTGCTAGAGCT+AGG + tig0026192:13481-13500 Msa1427600:intron 40.0%
GAAATATAATCTGCAGGTGG+AGG + tig0026192:13790-13809 Msa1427600:intron 40.0%
ATTCTTCATTGGGGAGTTTC+TGG + tig0026192:13896-13915 Msa1427600:CDS 40.0%
!! GTTTCTGGTGTGGATGATAT+TGG + tig0026192:13911-13930 Msa1427600:CDS 40.0%
CGCGATTCATCGTAATGAAT+TGG + tig0026192:14101-14120 Msa1427600:intron 40.0%
AATCTTGATTGTGCAGGGAA+TGG + tig0026192:14237-14256 Msa1427600:intron 40.0%
!! ATCCAGGAGGTATCATATCA+CGG - tig0026192:14274-14293 None:intergenic 40.0%
AAATCATCATCATCACCGGA+AGG + tig0026192:14429-14448 Msa1427600:CDS 40.0%
AAGAGACTTCAAAGTTCCTC+TGG + tig0026192:14673-14692 Msa1427600:CDS 40.0%
!!! ACTGGTTTTCCTCACTCATA+GGG + tig0026192:15310-15329 Msa1427600:CDS 40.0%
TGTAGAACTGCCTTTAACCA+AGG + tig0026192:15451-15470 Msa1427600:CDS 40.0%
GCGAACTCAATTAAAGGTAG+TGG + tig0026192:15670-15689 Msa1427600:intron 40.0%
CGATCTGTTATGTAGCCAAA+AGG + tig0026192:16078-16097 Msa1427600:intron 40.0%
GTTATGTAGCCAAAAGGAAG+TGG + tig0026192:16084-16103 Msa1427600:intron 40.0%
TAGCCAAAAGGAAGTGGAAA+GGG + tig0026192:16090-16109 Msa1427600:intron 40.0%
GAAGATACTATAGGCTTCAG+CGG - tig0026192:16442-16461 None:intergenic 40.0%
TTCGGATTCCAAAACAACCT+CGG - tig0026192:16508-16527 None:intergenic 40.0%
!! ATGATTTTTGGAGGCAACTC+AGG - tig0026192:16534-16553 None:intergenic 40.0%
GTTGCCTCCAAAAATCATGT+CGG + tig0026192:16536-16555 Msa1427600:CDS 40.0%
TTGCCTCCAAAAATCATGTC+GGG + tig0026192:16537-16556 Msa1427600:CDS 40.0%
GGGTATGAAATAGTATGCCA+AGG + tig0026192:16570-16589 Msa1427600:CDS 40.0%
TAGACTCCCAATTAAACCCT+TGG - tig0026192:16590-16609 None:intergenic 40.0%
GCTAAAGAACTAGCATCTCT+TGG + tig0026192:16648-16667 Msa1427600:CDS 40.0%
ACTGACAGATATGTTGACAC+CGG + tig0026192:16836-16855 Msa1427600:intron 40.0%
!! AGACATATCGGTGTTAGACA+GGG - tig0026192:16911-16930 None:intergenic 40.0%
!! AAGACATATCGGTGTTAGAC+AGG - tig0026192:16912-16931 None:intergenic 40.0%
TGTCTAACACCGATATGTCT+TGG + tig0026192:16911-16930 Msa1427600:intron 40.0%
ATGGCTTCAATGTGAAGTGT+CGG + tig0026192:16943-16962 Msa1427600:intron 40.0%
GCATGCAATGTTCAATCATG+TGG + tig0026192:17064-17083 Msa1427600:intron 40.0%
TGGTACCATTGATGAACTGA+AGG + tig0026192:17176-17195 Msa1427600:CDS 40.0%
CACATCCTTCAGTTCATCAA+TGG - tig0026192:17184-17203 None:intergenic 40.0%
CATTGATGAACTGAAGGATG+TGG + tig0026192:17182-17201 Msa1427600:CDS 40.0%
GCTGAGCATCAGAATAAGAA+TGG + tig0026192:17267-17286 Msa1427600:CDS 40.0%
GGTTGAAGATCCATGGATTT+CGG + tig0026192:17450-17469 Msa1427600:intron 40.0%
AGTGGTATAACCGAAATCCA+TGG - tig0026192:17463-17482 None:intergenic 40.0%
TTCTTTCTTCTATACAGGGG+AGG + tig0026192:17842-17861 Msa1427600:intron 40.0%
TCTTTCTTCTATACAGGGGA+GGG + tig0026192:17843-17862 Msa1427600:intron 40.0%
TAGTGGAGATAGTTTCCATG+CGG + tig0026192:17876-17895 Msa1427600:CDS 40.0%
TGGAGAATTGAGATGGTATC+TGG + tig0026192:18083-18102 Msa1427600:intron 40.0%
AAGCAGTTTACAAAGGGTAG+GGG - tig0026192:18267-18286 None:intergenic 40.0%
GAAGCAGTTTACAAAGGGTA+GGG - tig0026192:18268-18287 None:intergenic 40.0%
AGAAGCAGTTTACAAAGGGT+AGG - tig0026192:18269-18288 None:intergenic 40.0%
GTCGTAGAAGCAGTTTACAA+AGG - tig0026192:18274-18293 None:intergenic 40.0%
TGTGCATAAGAATGGATGGT+TGG - tig0026192:18344-18363 None:intergenic 40.0%
GAGCCATATGTGCATAAGAA+TGG - tig0026192:18352-18371 None:intergenic 40.0%
TTCTCTGAGTGGAGTAGATT+GGG - tig0026192:18567-18586 None:intergenic 40.0%
TTTCTCTGAGTGGAGTAGAT+TGG - tig0026192:18568-18587 None:intergenic 40.0%
TTATGATTAAGCAGAGAGGG+GGG - tig0026192:18610-18629 None:intergenic 40.0%
CCCTCTCTGCTTAATCATAA+TGG + tig0026192:18610-18629 Msa1427600:intron 40.0%
! AGTGAGGTAGGGTATTTAGT+TGG - tig0026192:18712-18731 None:intergenic 40.0%
GTAGCATAAGCTTCATGTTG+AGG + tig0026192:18805-18824 Msa1427600:intron 40.0%
GGGGTAGTTATCGTATTACA+TGG + tig0026192:18890-18909 Msa1427600:intron 40.0%
! GACTTTGTCAGAGGATTTTG+GGG + tig0026192:19068-19087 Msa1427600:CDS 40.0%
! AACCAAACCATACTTTTGCG+TGG + tig0026192:19118-19137 Msa1427600:CDS 40.0%
! ACCAAACCATACTTTTGCGT+GGG + tig0026192:19119-19138 Msa1427600:CDS 40.0%
CACAGAGTGAAGAATTCCTT+TGG - tig0026192:19270-19289 None:intergenic 40.0%
TCTGTGAGTACTCAACTTGA+CGG + tig0026192:19284-19303 Msa1427600:intron 40.0%
TATATATGCTGTGCACCCAT+AGG + tig0026192:19774-19793 Msa1427600:intron 40.0%
!! GGCTTTTGATTGTTTTGTGC+AGG - tig0026192:19853-19872 None:intergenic 40.0%
! GATCATTTTACAACTACCCC+CGG - tig0026192:20000-20019 None:intergenic 40.0%
TAAGTATCCTTAGAGAGGTG+CGG - tig0026192:20081-20100 None:intergenic 40.0%
CATCTTTCCAATGCCTACAA+AGG - tig0026192:20207-20226 None:intergenic 40.0%
TTCATAGAAAACCACGACAC+TGG + tig0026192:20303-20322 Msa1427600:CDS 40.0%
! TCCTTGCATTTCTTTTCCGT+GGG - tig0026192:20727-20746 None:intergenic 40.0%
! ATCCTTGCATTTCTTTTCCG+TGG - tig0026192:20728-20747 None:intergenic 40.0%
ATGTGGTCAAAGAACACTGA+CGG - tig0026192:20780-20799 None:intergenic 40.0%
CACTTCTCTCTATTCGGAAA+CGG + tig0026192:20829-20848 Msa1427600:CDS 40.0%
ACCACTTAGTAGCGTTTATG+TGG + tig0026192:20903-20922 Msa1427600:intron 40.0%
TCCACATAAACGCTACTAAG+TGG - tig0026192:20907-20926 None:intergenic 40.0%
! TTTGGCTGCAGCTATGTTTT+TGG + tig0026192:21015-21034 Msa1427600:intron 40.0%
!! CATTTTTGGGAATCACTAGG+TGG - tig0026192:21752-21771 None:intergenic 40.0%
CACCTAGTGATTCCCAAAAA+TGG + tig0026192:21750-21769 Msa1427600:CDS 40.0%
CCCAAAAATGGAAATCAGCT+TGG + tig0026192:21762-21781 Msa1427600:CDS 40.0%
!! CCCAAGCTGATTTCCATTTT+TGG - tig0026192:21766-21785 None:intergenic 40.0%
AAATGGAAATCAGCTTGGGA+CGG + tig0026192:21767-21786 Msa1427600:CDS 40.0%
AGACTACAATATTTGGGAGC+TGG + tig0026192:21793-21812 Msa1427600:CDS 40.0%
CATTATAGAGAAGGTTGCAG+AGG + tig0026192:21975-21994 Msa1427600:three_prime_UTR 40.0%
GGTTCATTTCAGCTTAAGTC+TGG + tig0026192:21997-22016 Msa1427600:three_prime_UTR 40.0%
!!! TGGTGATGGTTCCTTTTGCA+AGG - tig0026192:12845-12864 None:intergenic 45.0%
TGGTTCAGAGAAAACAGTGG+TGG - tig0026192:12890-12909 None:intergenic 45.0%
GAGTGGTTCAGAGAAAACAG+TGG - tig0026192:12893-12912 None:intergenic 45.0%
TTGCTAGAGCTAGGACTTTG+TGG + tig0026192:13490-13509 Msa1427600:intron 45.0%
ATAGTTGGGTGCAATCTACC+AGG + tig0026192:13866-13885 Msa1427600:CDS 45.0%
GGTGCAATCTACCAGGAAAT+TGG + tig0026192:13873-13892 Msa1427600:CDS 45.0%
CTGGTGTGGATGATATTGGA+AGG + tig0026192:13915-13934 Msa1427600:CDS 45.0%
ATAGCCGGGTCACTAAGTTT+AGG + tig0026192:14037-14056 Msa1427600:intron 45.0%
!! TCCAGGAGGTATCATATCAC+GGG - tig0026192:14273-14292 None:intergenic 45.0%
ATCGCTGAAATCTCATCGCT+GGG - tig0026192:14489-14508 None:intergenic 45.0%
AATCGCTGAAATCTCATCGC+TGG - tig0026192:14490-14509 None:intergenic 45.0%
ACCACCCAAATTGGAATGGA+GGG - tig0026192:14605-14624 None:intergenic 45.0%
CAAGACCACCCAAATTGGAA+TGG - tig0026192:14609-14628 None:intergenic 45.0%
ATCGACAAGACCACCCAAAT+TGG - tig0026192:14614-14633 None:intergenic 45.0%
GGCACTTGGTATCAACACAA+AGG + tig0026192:14650-14669 Msa1427600:CDS 45.0%
!! ACAGGCTTTAGTTTGTCCCA+AGG + tig0026192:14737-14756 Msa1427600:CDS 45.0%
GTTGTGAGGACAAAGCTGAA+AGG - tig0026192:15256-15275 None:intergenic 45.0%
!!! CACTGGTTTTCCTCACTCAT+AGG + tig0026192:15309-15328 Msa1427600:CDS 45.0%
TTCCTCACTCATAGGGACAT+AGG + tig0026192:15317-15336 Msa1427600:CDS 45.0%
TCCTCACTCATAGGGACATA+GGG + tig0026192:15318-15337 Msa1427600:CDS 45.0%
! CATCGGTTGCTTCTGAATTC+AGG - tig0026192:15361-15380 None:intergenic 45.0%
ACTCTATCAGTGTCTCCGTT+AGG + tig0026192:15489-15508 Msa1427600:CDS 45.0%
CTCTACAAACTCCCCAATGA+AGG - tig0026192:15577-15596 None:intergenic 45.0%
CAAAGAACACGAAGCAATGC+AGG - tig0026192:16043-16062 None:intergenic 45.0%
GTAGCCAAAAGGAAGTGGAA+AGG + tig0026192:16089-16108 Msa1427600:intron 45.0%
! CTTCCCTTTCCACTTCCTTT+TGG - tig0026192:16096-16115 None:intergenic 45.0%
ACTTCCGGTAGCTCAGTTAT+TGG + tig0026192:16228-16247 Msa1427600:CDS 45.0%
GTTGCCAATAACTGAGCTAC+CGG - tig0026192:16235-16254 None:intergenic 45.0%
CTCAGTTATTGGCAACAGAG+AGG + tig0026192:16239-16258 Msa1427600:CDS 45.0%
GTTGTAAAGAGTGAAGAGGC+AGG + tig0026192:16273-16292 Msa1427600:CDS 45.0%
TTTCTCCGAGGAAGCTATTG+TGG + tig0026192:16479-16498 Msa1427600:CDS 45.0%
GGATTCCACAATAGCTTCCT+CGG - tig0026192:16487-16506 None:intergenic 45.0%
! TGTGGAATCCGAGGTTGTTT+TGG + tig0026192:16497-16516 Msa1427600:CDS 45.0%
!! GTTCCCGACATGATTTTTGG+AGG - tig0026192:16543-16562 None:intergenic 45.0%
! CCTGTTCCCGACATGATTTT+TGG - tig0026192:16546-16565 None:intergenic 45.0%
CCAAAAATCATGTCGGGAAC+AGG + tig0026192:16543-16562 Msa1427600:CDS 45.0%
ATCCCTTGGCATGTATCCTT+CGG - tig0026192:16718-16737 None:intergenic 45.0%
GTCCAGTGTCCAAGACATAT+CGG - tig0026192:16923-16942 None:intergenic 45.0%
TATGTCTTGGACACTGGACA+TGG + tig0026192:16924-16943 Msa1427600:intron 45.0%
GGCAAATTGCTTAGACCTGA+TGG + tig0026192:17017-17036 Msa1427600:intron 45.0%
TATTTGGAGGTCGTCTCAAC+TGG + tig0026192:17301-17320 Msa1427600:CDS 45.0%
ATTTGGAGGTCGTCTCAACT+GGG + tig0026192:17302-17321 Msa1427600:CDS 45.0%
! AGCTGATGACCCACATTTTC+AGG + tig0026192:17341-17360 Msa1427600:CDS 45.0%
CTTTCTTCTATACAGGGGAG+GGG + tig0026192:17844-17863 Msa1427600:intron 45.0%
AGATGGTATCTGGTAGCAGT+AGG + tig0026192:18093-18112 Msa1427600:intron 45.0%
GATGGTATCTGGTAGCAGTA+GGG + tig0026192:18094-18113 Msa1427600:intron 45.0%
CGTGAAAAGCGATAGAGAGA+GGG - tig0026192:18134-18153 None:intergenic 45.0%
ACGTGAAAAGCGATAGAGAG+AGG - tig0026192:18135-18154 None:intergenic 45.0%
TGGATGGTTGGACAGATTCT+GGG - tig0026192:18332-18351 None:intergenic 45.0%
ATGGATGGTTGGACAGATTC+TGG - tig0026192:18333-18352 None:intergenic 45.0%
!! TTCTAAGACAAAGACCGTGC+TGG - tig0026192:18424-18443 None:intergenic 45.0%
TATGATTAAGCAGAGAGGGG+GGG - tig0026192:18609-18628 None:intergenic 45.0%
! GGTAGGGTATTTAGTTGGCA+AGG - tig0026192:18707-18726 None:intergenic 45.0%
!! TTTGTCAGAGGATTTTGGGG+TGG + tig0026192:19071-19090 Msa1427600:CDS 45.0%
! TCCCACGCAAAAGTATGGTT+TGG - tig0026192:19123-19142 None:intergenic 45.0%
TACTCTCCCACGCAAAAGTA+TGG - tig0026192:19128-19147 None:intergenic 45.0%
TCAGCACATCAGTGGTAGTT+GGG + tig0026192:19589-19608 Msa1427600:intron 45.0%
TAGGTGGGGACTCATGTATA+CGG - tig0026192:19812-19831 None:intergenic 45.0%
TGTTTGCACCCCTTTATTGG+AGG + tig0026192:19879-19898 Msa1427600:intron 45.0%
! TTTGGCTCCTTTGTAGGCAT+TGG + tig0026192:20197-20216 Msa1427600:intron 45.0%
!! ATGTGAGTATTGGCGCTTGT+CGG + tig0026192:20224-20243 Msa1427600:CDS 45.0%
ATGAAAGTAACGGCACGAGA+TGG - tig0026192:20288-20307 None:intergenic 45.0%
!! ACACTGGTTCTACACAGGTT+TGG + tig0026192:20319-20338 Msa1427600:intron 45.0%
!! ACTCGAGATTCTGATTTGGC+AGG + tig0026192:20440-20459 Msa1427600:intron 45.0%
! CCTTGCATTTCTTTTCCGTG+GGG - tig0026192:20726-20745 None:intergenic 45.0%
GCTTATACTCTTACTCACCC+AGG + tig0026192:20750-20769 Msa1427600:CDS 45.0%
TAGCGGCACTTCTCTCTATT+CGG + tig0026192:20823-20842 Msa1427600:CDS 45.0%
CTCTCTATTCGGAAACGGAA+CGG + tig0026192:20834-20853 Msa1427600:CDS 45.0%
TCTCTATTCGGAAACGGAAC+GGG + tig0026192:20835-20854 Msa1427600:CDS 45.0%
!!! TGCAGCTATGTTTTTGGTGC+TGG + tig0026192:21021-21040 Msa1427600:intron 45.0%
!!! CGGGGCCTAAATTTTTTCCT+TGG + tig0026192:21348-21367 Msa1427600:intron 45.0%
GTAGGCCCTAAACATGCATA+TGG - tig0026192:21385-21404 None:intergenic 45.0%
CTAGGTGGTTCATAATGACC+AGG - tig0026192:21737-21756 None:intergenic 45.0%
CTACAATATTTGGGAGCTGG+AGG + tig0026192:21796-21815 Msa1427600:CDS 45.0%
!!! AAATTTTACTTTTTTTTTTA+GGG - tig0026192:15963-15982 None:intergenic 5.0%
!!! AAAATTTTACTTTTTTTTTT+AGG - tig0026192:15964-15983 None:intergenic 5.0%
!! ATTTATATAATTTAAATTCT+AGG + tig0026192:16736-16755 Msa1427600:intron 5.0%
ATGATAGGTGGTCGTGGTGA+TGG - tig0026192:12859-12878 None:intergenic 50.0%
ATGCTCATGATAGGTGGTCG+TGG - tig0026192:12865-12884 None:intergenic 50.0%
GTGGAGATGCTCATGATAGG+TGG - tig0026192:12871-12890 None:intergenic 50.0%
! GTGGTGGAGATGCTCATGAT+AGG - tig0026192:12874-12893 None:intergenic 50.0%
TGGGGATCCTATGTTCACAC+TGG + tig0026192:13437-13456 Msa1427600:intron 50.0%
GTCGTGACCAGTGTGAACAT+AGG - tig0026192:13447-13466 None:intergenic 50.0%
TTCACACTGGTCACGACATC+CGG + tig0026192:13450-13469 Msa1427600:intron 50.0%
TAATCTGCAGGTGGAGGGAA+AGG + tig0026192:13796-13815 Msa1427600:intron 50.0%
!! TCATTGGGGAGTTTCTGGTG+TGG + tig0026192:13901-13920 Msa1427600:CDS 50.0%
!! CCAGGAGGTATCATATCACG+GGG - tig0026192:14272-14291 None:intergenic 50.0%
TCCCTCCATTCCAATTTGGG+TGG + tig0026192:14601-14620 Msa1427600:intron 50.0%
GACCACCCAAATTGGAATGG+AGG - tig0026192:14606-14625 None:intergenic 50.0%
!! GCTACAGTTTGTGGTGGATG+AGG - tig0026192:15632-15651 None:intergenic 50.0%
TACGTCCCTCTCTCAACTTC+CGG + tig0026192:16213-16232 Msa1427600:CDS 50.0%
AGCTACCGGAAGTTGAGAGA+GGG - tig0026192:16221-16240 None:intergenic 50.0%
ATAGCTTCCTCGGAGAAAGC+TGG - tig0026192:16477-16496 None:intergenic 50.0%
GGAAGCTATTGTGGAATCCG+AGG + tig0026192:16488-16507 Msa1427600:CDS 50.0%
TGGAGGCAACTCAGGTGATT+CGG - tig0026192:16526-16545 None:intergenic 50.0%
GAAACAGAGTCTGTAGGTGG+CGG - tig0026192:16693-16712 None:intergenic 50.0%
GGTGAAACAGAGTCTGTAGG+TGG - tig0026192:16696-16715 None:intergenic 50.0%
TCGGGTGAAACAGAGTCTGT+AGG - tig0026192:16699-16718 None:intergenic 50.0%
ACAGACTCTGTTTCACCCGA+AGG + tig0026192:16699-16718 Msa1427600:intron 50.0%
ACCCGAAGGATACATGCCAA+GGG + tig0026192:16713-16732 Msa1427600:intron 50.0%
TCCCTTGGCATGTATCCTTC+GGG - tig0026192:16717-16736 None:intergenic 50.0%
CACCGATATGTCTTGGACAC+TGG + tig0026192:16918-16937 Msa1427600:intron 50.0%
TATCGAAGGTTCTCGGTCAC+TGG - tig0026192:17503-17522 None:intergenic 50.0%
! GATCAATGTTTGGAGCCGCA+TGG - tig0026192:17894-17913 None:intergenic 50.0%
!! ATAGAGAGAGGGTGCTCGAA+AGG - tig0026192:18123-18142 None:intergenic 50.0%
AAGCACAGCAAGGACAGGAA+AGG - tig0026192:18159-18178 None:intergenic 50.0%
! GTGAAAAGCACAGCAAGGAC+AGG - tig0026192:18164-18183 None:intergenic 50.0%
! GTGAGGTGAAAAGCACAGCA+AGG - tig0026192:18169-18188 None:intergenic 50.0%
TTACAAAGGGTAGGGGCTTG+AGG - tig0026192:18260-18279 None:intergenic 50.0%
GGATGGTTGGACAGATTCTG+GGG - tig0026192:18331-18350 None:intergenic 50.0%
ATGATTAAGCAGAGAGGGGG+GGG - tig0026192:18608-18627 None:intergenic 50.0%
TGGAGGCTTGACTTTGTCAG+AGG + tig0026192:19059-19078 Msa1427600:CDS 50.0%
!! ACTTTTGCGTGGGAGAGTAC+TGG + tig0026192:19129-19148 Msa1427600:CDS 50.0%
!!! CTTTTGCGTGGGAGAGTACT+GGG + tig0026192:19130-19149 Msa1427600:CDS 50.0%
ATCAAGATGCACACAGGCAG+AGG + tig0026192:19189-19208 Msa1427600:CDS 50.0%
!! GTTGACTGGATTAGTGCTGC+CGG + tig0026192:19215-19234 Msa1427600:CDS 50.0%
AAATGCACCTGCAGTACCAC+CGG - tig0026192:19237-19256 None:intergenic 50.0%
CGCTATTCGAAGAATCCCAC+AGG - tig0026192:19344-19363 None:intergenic 50.0%
TCACACAGTCAGCACATCAG+TGG + tig0026192:19581-19600 Msa1427600:intron 50.0%
GTCAGCACATCAGTGGTAGT+TGG + tig0026192:19588-19607 Msa1427600:intron 50.0%
ATCCTAAACGGGGTAGTTGC+AGG + tig0026192:19638-19657 Msa1427600:intron 50.0%
TCCTAAACGGGGTAGTTGCA+GGG + tig0026192:19639-19658 Msa1427600:intron 50.0%
!! CTCGGCTCTGGAATGAAAAG+AGG + tig0026192:19683-19702 Msa1427600:intron 50.0%
CGCTGTTTGCACCCCTTTAT+TGG + tig0026192:19876-19895 Msa1427600:intron 50.0%
!!! TTTTTTGAGGCTCCTTGGGG+AGG + tig0026192:19939-19958 Msa1427600:intron 50.0%
AAACTCACCGCACCTCTCTA+AGG + tig0026192:20071-20090 Msa1427600:intron 50.0%
GGTCATTGGAGATTTCCCCA+CGG + tig0026192:20708-20727 Msa1427600:CDS 50.0%
CCCCACGGAAAAGAAATGCA+AGG + tig0026192:20723-20742 Msa1427600:CDS 50.0%
AGAACACTGACGGAGTTCCT+GGG - tig0026192:20770-20789 None:intergenic 50.0%
AAGAACACTGACGGAGTTCC+TGG - tig0026192:20771-20790 None:intergenic 50.0%
! GCAGAAGCACAGTGAGTATC+AGG + tig0026192:20865-20884 Msa1427600:intron 50.0%
GTTGCTATGAAGATCGGTCC+TGG + tig0026192:21716-21735 Msa1427600:CDS 50.0%
! TTGGATGATGGTGTCAGGTG+TGG + tig0026192:21914-21933 Msa1427600:three_prime_UTR 50.0%
GGAGAGAGAAACTCATGGGG+TGG - tig0026192:13045-13064 None:intergenic 55.0%
!! GGAGGTATCATATCACGGGG+TGG - tig0026192:14269-14288 None:intergenic 55.0%
CCCCGTGATATGATACCTCC+TGG + tig0026192:14269-14288 Msa1427600:CDS 55.0%
!! TTGGGTGGTCTTGTCGATGC+AGG + tig0026192:14616-14635 Msa1427600:intron 55.0%
TCGATGCAGGACGAGGAAAC+TGG + tig0026192:14629-14648 Msa1427600:intron 55.0%
AGGACGAGGAAACTGGCACT+TGG + tig0026192:14636-14655 Msa1427600:intron 55.0%
GCCCTATGTCCCTATGAGTG+AGG - tig0026192:15322-15341 None:intergenic 55.0%
CACTCATAGGGACATAGGGC+AGG + tig0026192:15322-15341 Msa1427600:CDS 55.0%
!! GTTTGTGGTGGATGAGGAGC+AGG - tig0026192:15626-15645 None:intergenic 55.0%
GAGCTACCGGAAGTTGAGAG+AGG - tig0026192:16222-16241 None:intergenic 55.0%
CTCGGAGAAAGCTGGAACAG+AGG - tig0026192:16469-16488 None:intergenic 55.0%
CTCTGTTCCAGCTTTCTCCG+AGG + tig0026192:16467-16486 Msa1427600:CDS 55.0%
ATCATGTCGGGAACAGGCAC+AGG + tig0026192:16549-16568 Msa1427600:CDS 55.0%
TCATGTCGGGAACAGGCACA+GGG + tig0026192:16550-16569 Msa1427600:CDS 55.0%
CACCCGAAGGATACATGCCA+AGG + tig0026192:16712-16731 Msa1427600:intron 55.0%
! GAGCGGGGGAAAAGTACAAG+TGG - tig0026192:17481-17500 None:intergenic 55.0%
AAGGTTCTCGGTCACTGGAG+CGG - tig0026192:17498-17517 None:intergenic 55.0%
TGGGGACCGGTTACATGATC+TGG - tig0026192:18313-18332 None:intergenic 55.0%
! GTTGGACAGATTCTGGGGAC+CGG - tig0026192:18326-18345 None:intergenic 55.0%
GTCCATGACTCTCACCAGCA+CGG + tig0026192:18407-18426 Msa1427600:intron 55.0%
GGGGGTTCTCTTTCTCTGAG+TGG - tig0026192:18578-18597 None:intergenic 55.0%
TGATTAAGCAGAGAGGGGGG+GGG - tig0026192:18607-18626 None:intergenic 55.0%
GTGAGGCGAGTGAGTTGTGA+TGG - tig0026192:18659-18678 None:intergenic 55.0%
ACAGGCAGAGGATCGTTGAC+TGG + tig0026192:19201-19220 Msa1427600:CDS 55.0%
AGCCTCCGAATTCTCAGGGA+CGG - tig0026192:19665-19684 None:intergenic 55.0%
TCCCTGAGAATTCGGAGGCT+CGG + tig0026192:19665-19684 Msa1427600:intron 55.0%
! AAAGGGGTGCAAACAGCGCA+TGG - tig0026192:19874-19893 None:intergenic 55.0%
GCAAACAGCTCAACCGAGCT+GGG - tig0026192:19965-19984 None:intergenic 55.0%
TGCAAACAGCTCAACCGAGC+TGG - tig0026192:19966-19985 None:intergenic 55.0%
CCTGTGTAGAACCAGTGTCG+TGG - tig0026192:20317-20336 None:intergenic 55.0%
!! CCACGACACTGGTTCTACAC+AGG + tig0026192:20314-20333 Msa1427600:CDS 55.0%
! GGTCTTGTCGATGCAGGACG+AGG + tig0026192:14622-14641 Msa1427600:intron 60.0%
!! TGTGGTGGATGAGGAGCAGG+TGG - tig0026192:15623-15642 None:intergenic 60.0%
GAGTGAAGAGGCAGGCGAAG+AGG + tig0026192:16281-16300 Msa1427600:CDS 60.0%
AGGTTCTCGGTCACTGGAGC+GGG - tig0026192:17497-17516 None:intergenic 60.0%
GGGAGGGGCAACAAGAGTAG+TGG + tig0026192:17859-17878 Msa1427600:CDS 60.0%
GGGCTTGAGGCAATGCGTAG+AGG - tig0026192:18247-18266 None:intergenic 60.0%
! GACCGTGCTGGTGAGAGTCA+TGG - tig0026192:18412-18431 None:intergenic 60.0%
ATTAAGCAGAGAGGGGGGGG+GGG - tig0026192:18605-18624 None:intergenic 60.0%
GATTAAGCAGAGAGGGGGGG+GGG - tig0026192:18606-18625 None:intergenic 60.0%
!! GACTGGATTAGTGCTGCCGG+TGG + tig0026192:19218-19237 Msa1427600:CDS 60.0%
GCCCTGCAACTACCCCGTTT+AGG - tig0026192:19643-19662 None:intergenic 60.0%
CAGGGCCGTCCCTGAGAATT+CGG + tig0026192:19657-19676 Msa1427600:intron 60.0%
GCCGAGCCTCCGAATTCTCA+GGG - tig0026192:19669-19688 None:intergenic 60.0%
AGCCGAGCCTCCGAATTCTC+AGG - tig0026192:19670-19689 None:intergenic 60.0%
AGAATTCGGAGGCTCGGCTC+TGG + tig0026192:19671-19690 Msa1427600:intron 60.0%
GAGCTGTTTGCACCCCCTCA+AGG + tig0026192:19974-19993 Msa1427600:intron 60.0%
TGTTTGCACCCCCTCAAGGC+CGG + tig0026192:19978-19997 Msa1427600:intron 60.0%
ACAACTACCCCCGGCCTTGA+GGG - tig0026192:19991-20010 None:intergenic 60.0%
TACAACTACCCCCGGCCTTG+AGG - tig0026192:19992-20011 None:intergenic 60.0%
TTGGCGCTTGTCGGATCAGC+AGG + tig0026192:20233-20252 Msa1427600:CDS 60.0%
TGGCGCTTGTCGGATCAGCA+GGG + tig0026192:20234-20253 Msa1427600:CDS 60.0%
GATCAGCAGGGAAAACCCCC+CGG + tig0026192:20246-20265 Msa1427600:CDS 60.0%
GGAAAACCCCCCGGCGTTAT+GGG + tig0026192:20255-20274 Msa1427600:CDS 60.0%
TGGCCACCATCCCATAACGC+CGG - tig0026192:20268-20287 None:intergenic 60.0%
GTTCTCGGTCACTGGAGCGG+GGG - tig0026192:17495-17514 None:intergenic 65.0%
GGTTCTCGGTCACTGGAGCG+GGG - tig0026192:17496-17515 None:intergenic 65.0%
TTAAGCAGAGAGGGGGGGGG+GGG - tig0026192:18604-18623 None:intergenic 65.0%
AGTGCTGCCGGTGGTACTGC+AGG + tig0026192:19227-19246 Msa1427600:CDS 65.0%
GGCCGTCCCTGAGAATTCGG+AGG + tig0026192:19660-19679 Msa1427600:intron 65.0%
GTTTGCACCCCCTCAAGGCC+GGG + tig0026192:19979-19998 Msa1427600:intron 65.0%
TTTGCACCCCCTCAAGGCCG+GGG + tig0026192:19980-19999 Msa1427600:intron 65.0%
AACTACCCCCGGCCTTGAGG+GGG - tig0026192:19989-20008 None:intergenic 65.0%
CAACTACCCCCGGCCTTGAG+GGG - tig0026192:19990-20009 None:intergenic 65.0%
GGGAAAACCCCCCGGCGTTA+TGG + tig0026192:20254-20273 Msa1427600:CDS 65.0%
AACCCCCCGGCGTTATGGGA+TGG + tig0026192:20259-20278 Msa1427600:CDS 65.0%
CACCATCCCATAACGCCGGG+GGG - tig0026192:20264-20283 None:intergenic 65.0%
CCACCATCCCATAACGCCGG+GGG - tig0026192:20265-20284 None:intergenic 65.0%
GCCACCATCCCATAACGCCG+GGG - tig0026192:20266-20285 None:intergenic 65.0%
GGCCACCATCCCATAACGCC+GGG - tig0026192:20267-20286 None:intergenic 65.0%
TAAGCAGAGAGGGGGGGGGG+GGG - tig0026192:18603-18622 None:intergenic 70.0%
CTCCTTGGGGAGGCCCAGCT+CGG + tig0026192:19949-19968 Msa1427600:intron 70.0%
AACCGAGCTGGGCCTCCCCA+AGG - tig0026192:19954-19973 None:intergenic 70.0%
TTGCACCCCCTCAAGGCCGG+GGG + tig0026192:19981-20000 Msa1427600:intron 70.0%
CCCCCGGCGTTATGGGATGG+TGG + tig0026192:20262-20281 Msa1427600:CDS 70.0%
AAGCAGAGAGGGGGGGGGGG+GGG - tig0026192:18602-18621 None:intergenic 75.0%
! AGCAGAGAGGGGGGGGGGGG+GGG - tig0026192:18601-18620 None:intergenic 80.0%
! AGAGAGGGGGGGGGGGGGGG+GGG - tig0026192:18598-18617 None:intergenic 85.0%
! CAGAGAGGGGGGGGGGGGGG+GGG - tig0026192:18599-18618 None:intergenic 85.0%
! GCAGAGAGGGGGGGGGGGGG+GGG - tig0026192:18600-18619 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG - tig0026192:18596-18615 None:intergenic 90.0%
! GAGAGGGGGGGGGGGGGGGG+GGG - tig0026192:18597-18616 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
tig0026192 gene 12767 22212 12767 ID=Msa1427600;Name=Msa1427600
tig0026192 mRNA 12767 22212 12767 ID=Msa1427600-mRNA-1;Parent=Msa1427600;Name=Msa1427600-mRNA-1;_AED=0.07;_eAED=0.07;_QI=11|0.83|0.84|1|1|1|13|386|946
tig0026192 exon 12767 13167 12767 ID=Msa1427600-mRNA-1:exon:5522;Parent=Msa1427600-mRNA-1
tig0026192 exon 13806 13936 13806 ID=Msa1427600-mRNA-1:exon:5523;Parent=Msa1427600-mRNA-1
tig0026192 exon 14253 14307 14253 ID=Msa1427600-mRNA-1:exon:5524;Parent=Msa1427600-mRNA-1
tig0026192 exon 14402 14524 14402 ID=Msa1427600-mRNA-1:exon:5525;Parent=Msa1427600-mRNA-1
tig0026192 exon 14638 14758 14638 ID=Msa1427600-mRNA-1:exon:5526;Parent=Msa1427600-mRNA-1
tig0026192 exon 15261 15685 15261 ID=Msa1427600-mRNA-1:exon:5527;Parent=Msa1427600-mRNA-1
tig0026192 exon 16093 16685 16093 ID=Msa1427600-mRNA-1:exon:5528;Parent=Msa1427600-mRNA-1
tig0026192 exon 17173 17362 17173 ID=Msa1427600-mRNA-1:exon:5529;Parent=Msa1427600-mRNA-1
tig0026192 exon 17859 17965 17859 ID=Msa1427600-mRNA-1:exon:5530;Parent=Msa1427600-mRNA-1
tig0026192 exon 19037 19286 19037 ID=Msa1427600-mRNA-1:exon:5531;Parent=Msa1427600-mRNA-1
tig0026192 exon 20213 20335 20213 ID=Msa1427600-mRNA-1:exon:5532;Parent=Msa1427600-mRNA-1
tig0026192 exon 20708 20875 20708 ID=Msa1427600-mRNA-1:exon:5533;Parent=Msa1427600-mRNA-1
tig0026192 exon 21662 22212 21662 ID=Msa1427600-mRNA-1:exon:5534;Parent=Msa1427600-mRNA-1
tig0026192 five_prime_UTR 12767 12777 12767 ID=Msa1427600-mRNA-1:five_prime_utr;Parent=Msa1427600-mRNA-1
tig0026192 CDS 12778 13167 12778 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 13806 13936 13806 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 14253 14307 14253 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 14402 14524 14402 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 14638 14758 14638 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 15261 15685 15261 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 16093 16685 16093 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 17173 17362 17173 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 17859 17965 17859 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 19037 19286 19037 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 20213 20335 20213 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 20708 20875 20708 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 CDS 21662 21826 21662 ID=Msa1427600-mRNA-1:cds;Parent=Msa1427600-mRNA-1
tig0026192 three_prime_UTR 21827 22212 21827 ID=Msa1427600-mRNA-1:three_prime_utr;Parent=Msa1427600-mRNA-1
Gene Sequence

>Msa1427600

ATGCTCTTAGAAGCTAATACTAAGAAGCAAAAGGTGTCTTTTTATGTTGTCTTTGTAACATCTTCCTTGCAAAAGGAACCATCACCACGACCACCTATCATGAGCATCTCCACCACTGTTTTCTCTGAACCACTCTTCAATTTCAAACTCTCTCCCTACCACAGATTAGCTACCATTAACCGTTTCAAGCCAAATTCTTCACACTCTCTCTCTTCCACTTCCAATACTATTAACTATGGTTCTTGTTCTTGGACATTGAAGCAGCCACCCCATGAGTTTCTCTCTCCAAAATTTGAAACTTTTGCTACAAATACTGATACCCTTCAACAGATTCAATCTTCTGATGATGTCATTTTCAGTCAGACTCATCCCATCAACAGAATTGAACTGGTGGAGGGAAAGGTGTTTATAAGATTAGATCAAGGGAATGATTTGAAGAATTCAGAGCTTATAGTTGGGTGCAATCTACCAGGAAATTGGATTCTTCATTGGGGAGTTTCTGGTGTGGATGATATTGGAAGGGAATGGAATCAACCACCCCGTGATATGATACCTCCTGGATCTATTCCTATAAAGGACTATGCAATAGAGACACCTTTGAAGAAATCATCATCATCACCGGAAGGAGATACTCTTTATGAAGTCAGGATCGGTTTTAAGCCCAGCGATGAGATTTCAGCGATTAATTTTGTTCTTAAGGACGAGGAAACTGGCACTTGGTATCAACACAAAGGAAGAGACTTCAAAGTTCCTCTGGTAAACTATCTTAAGGAGGATGCTAATTTAATTGGACCTAAAACAGGCTTTAGTTTGTCCCAAGCTTTGTCCTCACAACATTTATTTAATGAGCTTGATCTGACTTACATTTCACTGGTTTTCCTCACTCATAGGGACATAGGGCAGGTATCTAAAGTTATCCTGAATTCAGAAGCAACCGATGACAAAGTTCAAGATAGCAACAGTGAATCGGAAAATCCAAAAAAGGAAAATAGTCAAGCAGAAGGTTTCAATGTAGAACTGCCTTTAACCAAGGAAGTTACTGTCAATAACTCTATCAGTGTCTCCGTTAGGAAATGCTCAGAAACAGCTAAAAATATTTTGGATTTAGAAACGGATATACCAGGTGATATTTTCCTTCATTGGGGAGTTTGTAGAGATGATTTAAGAAGTTGGGAAGCTCCACCTGCTCCTCATCCACCACAAACTGTAGCATATAAAGACACAGTTTGGCGAACTCAATTAAAGCCAAAAGGAAGTGGAAAGGGAAGTTCAGCACAAATCTCTTTGGGAGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGATAAATGAAAATTCATGGTTAAATAACAAGGGAATTGATTTTTACGTCCCTCTCTCAACTTCCGGTAGCTCAGTTATTGGCAACAGAGAGGATCAATCGAAAGTTGTAAAGAGTGAAGAGGCAGGCGAAGAGGAATCTAACTCTGAATTTACCAATGAAATAATCAATGAAATAAGGCATTTGGTTACTGGCATTTCATCTGTGAAGAGACGAAAAACGAAATCCAAAGAAGCTCAAGAAACCATTCTTCAAGAAATTGAAAGACTGGCCGCTGAAGCCTATAGTATCTTCAGAACCTCTGTTCCAGCTTTCTCCGAGGAAGCTATTGTGGAATCCGAGGTTGTTTTGGAATCCGAATCACCTGAGTTGCCTCCAAAAATCATGTCGGGAACAGGCACAGGGTATGAAATAGTATGCCAAGGGTTTAATTGGGAGTCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGAAAGCTAAAGAACTAGCATCTCTTGGCTTTACTGTTATTTGGTATGGTACCATTGATGAACTGAAGGATGTGGTGAAAGAATTTCATAAAGTTGGAATCAAAGTGCTAGGAGATGCTGTTTTGAATCATCGTTGTGCTGAGCATCAGAATAAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAGTTGTAGCTGATGACCCACATTTTCAGGGGAGGGGCAACAAGAGTAGTGGAGATAGTTTCCATGCGGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAACGATATTAAAGAATGGTTATGCTGGTTAAGGGAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACCAAACCATACTTTTGCGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACACAGGCAGAGGATCGTTGACTGGATTAGTGCTGCCGGTGGTACTGCAGGTGCATTTGATGTTACAACCAAAGGAATTCTTCACTCTGCATTGGAAAGATGTGAGTATTGGCGCTTGTCGGATCAGCAGGGAAAACCCCCCGGCGTTATGGGATGGTGGCCATCTCGTGCCGTTACTTTCATAGAAAACCACGACACTGGTTCTACACAGGGTCATTGGAGATTTCCCCACGGAAAAGAAATGCAAGGATATGCTTATACTCTTACTCACCCAGGAACTCCGTCAGTGTTCTTTGACCACATTTTTTCTCACTATAAAAATGAAATAGCGGCACTTCTCTCTATTCGGAAACGGAACGGGATCAACTGCAGAAGCACAGTTAAAATTACCAAATCAGAAAGGGACGTTTATGCTGCTATCATAGACGAAAAAGTTGCTATGAAGATCGGTCCTGGTCATTATGAACCACCTAGTGATTCCCAAAAATGGAAATCAGCTTGGGACGGAAGAGACTACAATATTTGGGAGCTGGAGGAATCATAA
Protein sequence

>Msa1427600

MLLEANTKKQKVSFYVVFVTSSLQKEPSPRPPIMSISTTVFSEPLFNFKLSPYHRLATINRFKPNSSHSLSSTSNTINYGSCSWTLKQPPHEFLSPKFETFATNTDTLQQIQSSDDVIFSQTHPINRIELVEGKVFIRLDQGNDLKNSELIVGCNLPGNWILHWGVSGVDDIGREWNQPPRDMIPPGSIPIKDYAIETPLKKSSSSPEGDTLYEVRIGFKPSDEISAINFVLKDEETGTWYQHKGRDFKVPLVNYLKEDANLIGPKTGFSLSQALSSQHLFNELDLTYISLVFLTHRDIGQVSKVILNSEATDDKVQDSNSESENPKKENSQAEGFNVELPLTKEVTVNNSISVSVRKCSETAKNILDLETDIPGDIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVWRTQLKPKGSGKGSSAQISLGEEFSGFLFVLKINENSWLNNKGIDFYVPLSTSGSSVIGNREDQSKVVKSEEAGEEESNSEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIFRTSVPAFSEEAIVESEVVLESESPELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYMELKEKAKELASLGFTVIWYGTIDELKDVVKEFHKVGIKVLGDAVLNHRCAEHQNKNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQDFVRNDIKEWLCWLREEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFCVGEYWDSLSYTYGEMDHNQDAHRQRIVDWISAAGGTAGAFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFPHGKEMQGYAYTLTHPGTPSVFFDHIFSHYKNEIAALLSIRKRNGINCRSTVKITKSERDVYAAIIDEKVAMKIGPGHYEPPSDSQKWKSAWDGRDYNIWELEES*