Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439910 | XP_013469415.1 | 85.714 | 532 | 27 | 4 | 1 | 483 | 1 | 532 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439910 | sp|F4HWL3|RLP4_ARATH | 30.625 | 480 | 272 | 14 | 37 | 473 | 28 | 489 | 2.63e-54 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439910 | A0A072VPY1 | 85.714 | 532 | 27 | 4 | 1 | 483 | 1 | 532 | 0.0 | 845 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036730 | Msa1439910 | 0.820990 | 5.121312e-53 | -8.615850e-47 |
| Msa1425500 | Msa1439910 | 0.806739 | 7.107325e-50 | -8.615850e-47 |
| Msa1437980 | Msa1439910 | 0.846726 | 1.812595e-59 | -8.615850e-47 |
| Msa1090280 | Msa1439910 | 0.838467 | 2.825989e-57 | -8.615850e-47 |
| Msa0931020 | Msa1439910 | 0.847111 | 1.421457e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439910 | MtrunA17_Chr1g0198681 | 85.714 | 532 | 27 | 4 | 1 | 483 | 1 | 532 | 0.0 | 845 |
| Msa1439910 | MtrunA17_Chr5g0422481 | 59.065 | 535 | 148 | 11 | 9 | 483 | 17 | 540 | 0.0 | 577 |
| Msa1439910 | MtrunA17_Chr2g0282601 | 28.884 | 502 | 308 | 14 | 6 | 473 | 3 | 489 | 1.92e-52 | 187 |
| Msa1439910 | MtrunA17_Chr8g0341151 | 26.482 | 506 | 295 | 24 | 6 | 473 | 7 | 473 | 6.26e-29 | 120 |
| Msa1439910 | MtrunA17_Chr7g0236881 | 28.185 | 518 | 261 | 26 | 32 | 473 | 22 | 504 | 1.59e-26 | 113 |
| Msa1439910 | MtrunA17_Chr8g0341231 | 25.626 | 519 | 313 | 21 | 1 | 473 | 12 | 503 | 3.06e-26 | 112 |
| Msa1439910 | MtrunA17_Chr8g0340941 | 25.933 | 509 | 302 | 21 | 4 | 473 | 1 | 473 | 2.04e-25 | 109 |
| Msa1439910 | MtrunA17_Chr8g0347661 | 24.502 | 502 | 329 | 15 | 1 | 473 | 5 | 485 | 2.44e-25 | 110 |
| Msa1439910 | MtrunA17_Chr8g0358831 | 24.896 | 482 | 303 | 19 | 1 | 473 | 14 | 445 | 4.87e-25 | 108 |
| Msa1439910 | MtrunA17_Chr6g0487571 | 26.877 | 413 | 236 | 17 | 105 | 480 | 105 | 488 | 1.32e-24 | 107 |
| Msa1439910 | MtrunA17_Chr8g0340871 | 25.245 | 511 | 304 | 20 | 4 | 473 | 10 | 483 | 2.48e-24 | 107 |
| Msa1439910 | MtrunA17_Chr8g0340881 | 27.363 | 402 | 236 | 16 | 105 | 473 | 104 | 482 | 4.52e-24 | 106 |
| Msa1439910 | MtrunA17_Chr8g0340931 | 24.754 | 509 | 316 | 21 | 1 | 473 | 1 | 478 | 4.93e-24 | 105 |
| Msa1439910 | MtrunA17_Chr8g0341091 | 27.459 | 488 | 279 | 23 | 40 | 473 | 59 | 525 | 7.63e-24 | 105 |
| Msa1439910 | MtrunA17_Chr1g0205741 | 26.250 | 480 | 297 | 22 | 27 | 476 | 15 | 467 | 1.10e-23 | 103 |
| Msa1439910 | MtrunA17_Chr8g0341011 | 26.500 | 400 | 240 | 16 | 105 | 473 | 103 | 479 | 4.66e-23 | 103 |
| Msa1439910 | MtrunA17_Chr8g0341061 | 27.500 | 440 | 247 | 22 | 83 | 473 | 112 | 528 | 6.61e-23 | 102 |
| Msa1439910 | MtrunA17_Chr8g0340891 | 26.448 | 397 | 241 | 17 | 105 | 473 | 104 | 477 | 4.93e-22 | 99.8 |
| Msa1439910 | MtrunA17_Chr2g0330591 | 27.586 | 406 | 228 | 17 | 104 | 473 | 101 | 476 | 1.33e-21 | 98.6 |
| Msa1439910 | MtrunA17_Chr7g0263591 | 26.514 | 479 | 277 | 19 | 40 | 473 | 36 | 484 | 5.51e-21 | 96.7 |
| Msa1439910 | MtrunA17_Chr8g0341101 | 26.749 | 486 | 288 | 25 | 40 | 473 | 62 | 531 | 4.12e-20 | 94.0 |
| Msa1439910 | MtrunA17_Chr8g0340911 | 24.901 | 506 | 308 | 24 | 1 | 470 | 6 | 475 | 4.25e-20 | 94.0 |
| Msa1439910 | MtrunA17_Chr1g0181731 | 24.632 | 475 | 293 | 18 | 40 | 473 | 30 | 480 | 8.13e-19 | 90.1 |
| Msa1439910 | MtrunA17_Chr3g0123141 | 25.780 | 481 | 288 | 21 | 40 | 476 | 28 | 483 | 1.56e-18 | 89.0 |
| Msa1439910 | MtrunA17_Chr4g0044941 | 27.778 | 270 | 155 | 13 | 227 | 470 | 14 | 269 | 6.21e-15 | 75.1 |
| Msa1439910 | MtrunA17_Chr5g0411631 | 25.725 | 517 | 298 | 24 | 1 | 476 | 6 | 477 | 2.03e-14 | 76.3 |
| Msa1439910 | MtrunA17_Chr8g0341111 | 37.681 | 138 | 77 | 6 | 339 | 473 | 253 | 384 | 5.27e-14 | 74.7 |
| Msa1439910 | MtrunA17_Chr8g0341141 | 25.266 | 376 | 230 | 16 | 106 | 450 | 101 | 456 | 1.20e-13 | 73.2 |
| Msa1439910 | MtrunA17_Chr7g0245221 | 40.323 | 124 | 65 | 5 | 355 | 473 | 26 | 145 | 3.05e-12 | 69.3 |
| Msa1439910 | MtrunA17_Chr2g0323941 | 33.962 | 159 | 82 | 6 | 318 | 473 | 10 | 148 | 3.81e-12 | 68.9 |
| Msa1439910 | MtrunA17_Chr8g0345471 | 37.931 | 116 | 60 | 4 | 356 | 470 | 27 | 131 | 8.24e-12 | 67.8 |
| Msa1439910 | MtrunA17_Chr5g0423871 | 37.500 | 120 | 69 | 4 | 355 | 473 | 41 | 155 | 9.59e-12 | 64.3 |
| Msa1439910 | MtrunA17_Chr3g0108361 | 37.313 | 134 | 73 | 6 | 347 | 473 | 25 | 154 | 2.55e-11 | 66.2 |
| Msa1439910 | MtrunA17_Chr7g0221711 | 36.986 | 146 | 83 | 5 | 333 | 473 | 4 | 145 | 2.62e-11 | 66.2 |
| Msa1439910 | MtrunA17_Chr4g0022431 | 32.143 | 140 | 76 | 5 | 340 | 476 | 20 | 143 | 7.79e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1439910 | AT1G25570.1 | 55.823 | 498 | 167 | 8 | 36 | 483 | 28 | 522 | 0.0 | 537 |
| Msa1439910 | AT1G28340.1 | 30.625 | 480 | 272 | 14 | 37 | 473 | 28 | 489 | 2.67e-55 | 195 |
| Msa1439910 | AT2G14440.1 | 28.298 | 470 | 276 | 21 | 42 | 473 | 34 | 480 | 2.52e-29 | 122 |
| Msa1439910 | AT1G51910.1 | 29.083 | 447 | 255 | 20 | 53 | 463 | 49 | 469 | 3.31e-29 | 122 |
| Msa1439910 | AT2G14510.1 | 28.512 | 477 | 269 | 23 | 40 | 473 | 32 | 479 | 1.80e-28 | 120 |
| Msa1439910 | AT2G14510.2 | 28.512 | 477 | 269 | 23 | 40 | 473 | 40 | 487 | 1.97e-28 | 119 |
| Msa1439910 | AT3G46340.1 | 26.848 | 514 | 301 | 25 | 2 | 473 | 1 | 481 | 4.69e-28 | 118 |
| Msa1439910 | AT5G48740.1 | 28.457 | 499 | 258 | 24 | 29 | 471 | 16 | 471 | 9.41e-28 | 117 |
| Msa1439910 | AT3G46400.1 | 26.638 | 473 | 284 | 19 | 40 | 473 | 31 | 479 | 1.07e-27 | 117 |
| Msa1439910 | AT3G21340.2 | 25.996 | 477 | 280 | 22 | 40 | 473 | 36 | 482 | 2.60e-27 | 116 |
| Msa1439910 | AT3G21340.1 | 25.786 | 477 | 281 | 21 | 40 | 473 | 36 | 482 | 2.97e-27 | 116 |
| Msa1439910 | AT1G51880.1 | 26.285 | 506 | 304 | 22 | 6 | 473 | 5 | 479 | 5.26e-27 | 115 |
| Msa1439910 | AT1G51880.2 | 26.285 | 506 | 304 | 22 | 6 | 473 | 23 | 497 | 6.40e-27 | 115 |
| Msa1439910 | AT1G49100.1 | 27.869 | 427 | 245 | 19 | 83 | 473 | 82 | 481 | 9.45e-27 | 114 |
| Msa1439910 | AT2G28990.2 | 26.271 | 472 | 284 | 20 | 40 | 473 | 28 | 473 | 2.85e-26 | 113 |
| Msa1439910 | AT2G28990.1 | 26.271 | 472 | 284 | 20 | 40 | 473 | 28 | 473 | 2.85e-26 | 113 |
| Msa1439910 | AT5G59680.1 | 27.378 | 431 | 251 | 15 | 83 | 479 | 82 | 484 | 1.07e-25 | 111 |
| Msa1439910 | AT1G51880.3 | 26.166 | 493 | 296 | 21 | 6 | 461 | 23 | 484 | 1.46e-25 | 111 |
| Msa1439910 | AT2G19190.1 | 27.021 | 433 | 243 | 18 | 91 | 480 | 87 | 489 | 2.52e-25 | 110 |
| Msa1439910 | AT1G07550.1 | 26.695 | 472 | 283 | 21 | 40 | 473 | 32 | 478 | 3.37e-25 | 110 |
| Msa1439910 | AT1G51800.1 | 26.535 | 456 | 273 | 21 | 53 | 473 | 48 | 476 | 8.52e-25 | 108 |
| Msa1439910 | AT2G28960.2 | 26.279 | 430 | 258 | 15 | 82 | 480 | 82 | 483 | 1.16e-24 | 108 |
| Msa1439910 | AT5G59670.2 | 27.347 | 490 | 273 | 25 | 31 | 473 | 25 | 478 | 9.66e-24 | 105 |
| Msa1439910 | AT5G59670.1 | 27.347 | 490 | 273 | 25 | 31 | 473 | 25 | 478 | 9.66e-24 | 105 |
| Msa1439910 | AT1G51860.1 | 25.000 | 500 | 298 | 23 | 6 | 463 | 5 | 469 | 1.53e-23 | 105 |
| Msa1439910 | AT1G67720.1 | 25.212 | 472 | 296 | 16 | 40 | 473 | 29 | 481 | 2.13e-23 | 104 |
| Msa1439910 | AT1G51890.3 | 26.969 | 508 | 294 | 25 | 8 | 473 | 3 | 475 | 2.35e-23 | 104 |
| Msa1439910 | AT1G51890.1 | 26.969 | 508 | 294 | 25 | 8 | 473 | 3 | 475 | 3.19e-23 | 103 |
| Msa1439910 | AT1G51890.2 | 26.969 | 508 | 294 | 25 | 8 | 473 | 3 | 475 | 3.27e-23 | 103 |
| Msa1439910 | AT2G04300.2 | 25.780 | 481 | 295 | 21 | 32 | 473 | 26 | 483 | 4.51e-23 | 103 |
| Msa1439910 | AT1G51850.2 | 23.992 | 471 | 292 | 20 | 40 | 473 | 29 | 470 | 8.12e-23 | 102 |
| Msa1439910 | AT1G51870.2 | 26.306 | 517 | 291 | 23 | 6 | 473 | 5 | 480 | 9.40e-23 | 102 |
| Msa1439910 | AT2G04300.1 | 26.398 | 447 | 277 | 19 | 40 | 473 | 35 | 442 | 1.22e-22 | 102 |
| Msa1439910 | AT1G05700.2 | 27.292 | 469 | 281 | 20 | 40 | 473 | 34 | 477 | 1.47e-22 | 102 |
| Msa1439910 | AT2G37050.2 | 26.078 | 487 | 302 | 20 | 21 | 473 | 19 | 481 | 1.71e-22 | 101 |
| Msa1439910 | AT1G05700.1 | 27.079 | 469 | 282 | 20 | 40 | 473 | 34 | 477 | 1.75e-22 | 101 |
| Msa1439910 | AT2G37050.4 | 26.078 | 487 | 302 | 20 | 21 | 473 | 19 | 481 | 1.84e-22 | 101 |
| Msa1439910 | AT2G37050.1 | 26.078 | 487 | 302 | 20 | 21 | 473 | 19 | 481 | 2.53e-22 | 101 |
| Msa1439910 | AT4G29990.2 | 25.159 | 473 | 290 | 22 | 40 | 473 | 30 | 477 | 2.60e-22 | 100 |
| Msa1439910 | AT2G37050.3 | 26.078 | 487 | 302 | 20 | 21 | 473 | 19 | 481 | 2.75e-22 | 101 |
| Msa1439910 | AT4G29990.1 | 25.159 | 473 | 290 | 22 | 40 | 473 | 30 | 477 | 3.68e-22 | 100 |
| Msa1439910 | AT2G28960.1 | 27.195 | 353 | 208 | 12 | 159 | 480 | 17 | 351 | 4.45e-22 | 100 |
| Msa1439910 | AT3G46370.2 | 27.737 | 411 | 222 | 20 | 105 | 473 | 13 | 390 | 4.71e-22 | 100 |
| Msa1439910 | AT3G46370.1 | 27.737 | 411 | 222 | 20 | 105 | 473 | 13 | 390 | 4.71e-22 | 100 |
| Msa1439910 | AT4G20450.1 | 24.771 | 436 | 277 | 14 | 82 | 480 | 84 | 505 | 7.01e-22 | 99.8 |
| Msa1439910 | AT4G20450.2 | 24.771 | 436 | 277 | 14 | 82 | 480 | 84 | 505 | 1.01e-21 | 99.4 |
| Msa1439910 | AT2G29000.1 | 25.647 | 425 | 251 | 17 | 84 | 473 | 80 | 474 | 2.19e-21 | 98.2 |
| Msa1439910 | AT1G51790.2 | 25.767 | 489 | 286 | 22 | 40 | 480 | 32 | 491 | 2.56e-21 | 98.2 |
| Msa1439910 | AT2G19210.1 | 27.500 | 400 | 234 | 18 | 106 | 473 | 106 | 481 | 2.85e-21 | 97.8 |
| Msa1439910 | AT1G51790.3 | 25.732 | 478 | 282 | 21 | 40 | 473 | 32 | 480 | 2.93e-21 | 97.8 |
| Msa1439910 | AT1G51790.1 | 25.732 | 478 | 282 | 21 | 40 | 473 | 32 | 480 | 2.93e-21 | 97.8 |
| Msa1439910 | AT1G07560.1 | 27.123 | 424 | 251 | 16 | 83 | 473 | 82 | 480 | 3.02e-21 | 97.8 |
| Msa1439910 | AT3G46420.1 | 24.843 | 479 | 283 | 19 | 40 | 473 | 32 | 478 | 3.65e-21 | 97.4 |
| Msa1439910 | AT3G19230.1 | 26.709 | 468 | 287 | 22 | 38 | 473 | 23 | 466 | 4.34e-21 | 96.7 |
| Msa1439910 | AT1G51810.1 | 28.448 | 348 | 200 | 13 | 159 | 473 | 14 | 345 | 7.75e-21 | 96.3 |
| Msa1439910 | AT1G51850.1 | 23.779 | 471 | 273 | 20 | 40 | 473 | 29 | 450 | 8.33e-21 | 96.7 |
| Msa1439910 | AT2G28970.2 | 25.915 | 355 | 215 | 13 | 149 | 473 | 5 | 341 | 8.39e-21 | 96.3 |
| Msa1439910 | AT5G16900.2 | 24.654 | 434 | 255 | 15 | 84 | 473 | 77 | 482 | 3.25e-20 | 94.4 |
| Msa1439910 | AT5G59660.3 | 38.686 | 137 | 80 | 4 | 339 | 473 | 284 | 418 | 8.73e-20 | 93.2 |
| Msa1439910 | AT5G16900.1 | 24.654 | 434 | 255 | 15 | 84 | 473 | 77 | 482 | 9.20e-20 | 93.2 |
| Msa1439910 | AT5G16900.3 | 24.654 | 434 | 255 | 15 | 84 | 473 | 77 | 482 | 9.20e-20 | 93.2 |
| Msa1439910 | AT5G59650.1 | 26.196 | 439 | 245 | 19 | 84 | 479 | 83 | 485 | 1.47e-19 | 92.8 |
| Msa1439910 | AT3G46330.1 | 25.175 | 429 | 264 | 19 | 77 | 473 | 77 | 480 | 7.78e-19 | 90.5 |
| Msa1439910 | AT1G51820.1 | 24.113 | 423 | 259 | 16 | 83 | 473 | 78 | 470 | 8.77e-19 | 90.1 |
| Msa1439910 | AT5G59650.2 | 25.446 | 448 | 245 | 19 | 84 | 479 | 83 | 493 | 1.11e-18 | 89.7 |
| Msa1439910 | AT4G29180.2 | 27.459 | 488 | 278 | 24 | 40 | 481 | 31 | 488 | 1.37e-18 | 89.7 |
| Msa1439910 | AT4G29180.3 | 27.459 | 488 | 278 | 24 | 40 | 481 | 31 | 488 | 1.60e-18 | 89.4 |
| Msa1439910 | AT5G59660.1 | 37.500 | 136 | 80 | 4 | 339 | 473 | 284 | 415 | 3.92e-18 | 88.2 |
| Msa1439910 | AT5G59660.2 | 37.500 | 136 | 80 | 4 | 339 | 473 | 262 | 393 | 4.37e-18 | 88.2 |
| Msa1439910 | AT2G19230.2 | 25.684 | 475 | 287 | 21 | 40 | 473 | 33 | 482 | 1.57e-17 | 86.3 |
| Msa1439910 | AT1G51860.2 | 27.273 | 330 | 189 | 15 | 167 | 463 | 14 | 325 | 2.17e-17 | 85.9 |
| Msa1439910 | AT2G19230.1 | 25.684 | 475 | 287 | 21 | 40 | 473 | 33 | 482 | 2.48e-17 | 85.9 |
| Msa1439910 | AT1G51805.1 | 24.766 | 428 | 251 | 17 | 83 | 473 | 78 | 471 | 7.04e-17 | 84.3 |
| Msa1439910 | AT3G05990.1 | 25.686 | 401 | 246 | 18 | 106 | 476 | 97 | 475 | 1.73e-16 | 82.4 |
| Msa1439910 | AT1G51820.2 | 36.496 | 137 | 83 | 4 | 339 | 473 | 74 | 208 | 6.33e-16 | 80.9 |
| Msa1439910 | AT1G51805.2 | 24.533 | 428 | 228 | 19 | 83 | 473 | 78 | 447 | 9.44e-16 | 80.9 |
| Msa1439910 | AT2G28970.1 | 28.972 | 214 | 137 | 7 | 265 | 473 | 173 | 376 | 1.11e-15 | 80.5 |
| Msa1439910 | AT1G51870.1 | 24.738 | 477 | 271 | 21 | 6 | 435 | 5 | 440 | 1.78e-15 | 79.7 |
| Msa1439910 | AT1G51890.4 | 39.855 | 138 | 78 | 5 | 339 | 473 | 276 | 411 | 3.49e-15 | 79.0 |
| Msa1439910 | AT1G51890.5 | 39.855 | 138 | 78 | 5 | 339 | 473 | 68 | 203 | 5.14e-15 | 78.2 |
| Msa1439910 | AT3G46330.2 | 24.038 | 416 | 260 | 18 | 77 | 461 | 77 | 467 | 8.94e-15 | 77.8 |
| Msa1439910 | AT4G29450.1 | 28.784 | 403 | 224 | 18 | 107 | 473 | 106 | 481 | 1.68e-14 | 76.6 |
| Msa1439910 | AT4G29180.1 | 26.639 | 488 | 280 | 24 | 40 | 481 | 31 | 486 | 2.14e-14 | 76.6 |
| Msa1439910 | AT1G51830.1 | 35.036 | 137 | 85 | 4 | 339 | 473 | 147 | 281 | 5.14e-14 | 75.1 |
| Msa1439910 | AT1G51830.2 | 35.036 | 137 | 85 | 4 | 339 | 473 | 154 | 288 | 5.80e-14 | 75.1 |
| Msa1439910 | AT5G16900.4 | 33.333 | 138 | 88 | 4 | 338 | 473 | 161 | 296 | 1.16e-13 | 73.9 |
| Msa1439910 | AT5G01950.3 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 7.39e-12 | 68.6 |
| Msa1439910 | AT5G01950.1 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 7.39e-12 | 68.6 |
| Msa1439910 | AT5G01950.4 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 7.39e-12 | 68.6 |
| Msa1439910 | AT5G01950.8 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 7.39e-12 | 68.6 |
| Msa1439910 | AT5G01950.6 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 8.35e-12 | 68.2 |
| Msa1439910 | AT5G01950.7 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 8.97e-12 | 68.2 |
| Msa1439910 | AT5G01950.5 | 37.121 | 132 | 70 | 6 | 349 | 473 | 21 | 146 | 9.15e-12 | 68.2 |
| Msa1439910 | AT2G20850.1 | 36.429 | 140 | 69 | 7 | 341 | 471 | 12 | 140 | 2.96e-11 | 66.2 |
| Msa1439910 | AT2G20850.2 | 36.429 | 140 | 69 | 7 | 341 | 471 | 12 | 140 | 2.99e-11 | 66.2 |
| Msa1439910 | AT5G37450.2 | 32.667 | 150 | 93 | 4 | 331 | 476 | 3 | 148 | 6.64e-11 | 65.5 |
| Msa1439910 | AT3G46280.1 | 28.095 | 210 | 117 | 9 | 37 | 233 | 24 | 212 | 6.77e-11 | 64.7 |
| Msa1439910 | AT5G37450.3 | 32.667 | 150 | 93 | 4 | 331 | 476 | 3 | 148 | 9.24e-11 | 65.1 |
Find 150 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAGCTTGTTGCTGTTTC+TGG | 0.073874 | tig0028915:+49726 | Msa1439910:CDS |
| AGAGAGGTTTGTTACATAAA+AGG | 0.181449 | tig0028915:-48388 | Msa1439910:intergenic |
| CTTGGCAGTCAAGGCTTAAA+AGG | 0.223624 | tig0028915:+50530 | Msa1439910:CDS |
| AAATTTGAGTAGTAATGTTT+TGG | 0.265295 | tig0028915:+49701 | Msa1439910:CDS |
| CGTGCGGCTCCGGTGATCAT+TGG | 0.275863 | tig0028915:+49293 | Msa1439910:CDS |
| CCGTCGCGTGCGGTGGATTC+AGG | 0.279601 | tig0028915:-49091 | Msa1439910:intergenic |
| GTGCGGCTCCGGTGATCATT+GGG | 0.291033 | tig0028915:+49294 | Msa1439910:CDS |
| AAGGAATCGCTTCGAGTTCC+AGG | 0.328067 | tig0028915:+49989 | Msa1439910:CDS |
| GGTTGGAGTGGAGGTGGAGG+TGG | 0.353930 | tig0028915:-48510 | Msa1439910:intergenic |
| CCTTCCACTCACCCTCTTCA+AGG | 0.354412 | tig0028915:+49798 | Msa1439910:CDS |
| AGAGCCGGTTAAGTGATTAT+TGG | 0.355788 | tig0028915:-51616 | Msa1439910:intergenic |
| GAGAGGTTTGTTACATAAAA+GGG | 0.360824 | tig0028915:-48387 | Msa1439910:intergenic |
| CTCCTACAACTTGGGATGCT+TGG | 0.363317 | tig0028915:+50041 | Msa1439910:CDS |
| CAATTTCTTCCGGTTCGGTT+CGG | 0.369881 | tig0028915:-49378 | Msa1439910:intergenic |
| CGGCTCTATACCTGACAGTT+TGG | 0.381864 | tig0028915:+51632 | Msa1439910:CDS |
| AAAAGATGGGGTTGGAGTGG+AGG | 0.382859 | tig0028915:-48519 | Msa1439910:intergenic |
| TAAGAAGGAGAGGAAGAAAT+GGG | 0.386032 | tig0028915:-48465 | Msa1439910:intergenic |
| ATCAGTATCGTTGGTGAAGC+CGG | 0.386261 | tig0028915:-49320 | Msa1439910:intergenic |
| TTATCCAATAATCACTTAAC+CGG | 0.398157 | tig0028915:+51612 | Msa1439910:CDS |
| TCCTACAACTTGGGATGCTT+GGG | 0.403579 | tig0028915:+50042 | Msa1439910:CDS |
| TGGGGTTGGAGTGGAGGTGG+AGG | 0.408627 | tig0028915:-48513 | Msa1439910:intergenic |
| TACGAAGAGGCGAGATTAGC+GGG | 0.410945 | tig0028915:-48348 | Msa1439910:intergenic |
| AAAACTCTGACAATTTCTTC+CGG | 0.411927 | tig0028915:-49388 | Msa1439910:intergenic |
| ATAAGAAGGAGAGGAAGAAA+TGG | 0.412283 | tig0028915:-48466 | Msa1439910:intergenic |
| TCTGGTGCTCCTTTGATTTG+TGG | 0.414322 | tig0028915:+49744 | Msa1439910:CDS |
| AGATGGGGTTGGAGTGGAGG+TGG | 0.424162 | tig0028915:-48516 | Msa1439910:intergenic |
| AGTGGAGGTGGAGGTGGAGA+TGG | 0.424962 | tig0028915:-48504 | Msa1439910:intergenic |
| ATCCCTGTGCTCCTACAACT+TGG | 0.426893 | tig0028915:+50032 | Msa1439910:CDS |
| AGCTTCATCGGAAAATAATT+CGG | 0.429177 | tig0028915:-49448 | Msa1439910:intergenic |
| GGTAGCGAGAAGAAGGAAGA+GGG | 0.430479 | tig0028915:-48961 | Msa1439910:intergenic |
| GGAGGTGGAGGTGGAGATGG+TGG | 0.433103 | tig0028915:-48501 | Msa1439910:intergenic |
| TCATACGAAGCGGAATTTAC+AGG | 0.433583 | tig0028915:-49220 | Msa1439910:intergenic |
| CTTTATTCTGTTGGCGTGCA+CGG | 0.435292 | tig0028915:+52080 | Msa1439910:CDS |
| TCTGACAATTTCTTCCGGTT+CGG | 0.435633 | tig0028915:-49383 | Msa1439910:intergenic |
| TAGTTACCAGAGGGAAAAGA+TGG | 0.437942 | tig0028915:-48533 | Msa1439910:intergenic |
| GGAGAGCCATGTTGTGTTGA+AGG | 0.442022 | tig0028915:-48813 | Msa1439910:intergenic |
| CTTCATCCGGCTGCCATGAC+CGG | 0.442238 | tig0028915:-49351 | Msa1439910:intergenic |
| GACGGTGGTGGTGGCGCCGC+CGG | 0.442389 | tig0028915:-48849 | Msa1439910:intergenic |
| CCTCCGTCGTCACCGCCGTT+TGG | 0.452443 | tig0028915:-49474 | Msa1439910:intergenic |
| GTTGAAGATGCCAAACTGTC+AGG | 0.460099 | tig0028915:-51642 | Msa1439910:intergenic |
| AGGTAGCGAGAAGAAGGAAG+AGG | 0.460601 | tig0028915:-48962 | Msa1439910:intergenic |
| CGGAGGAGGTAGCGAGAAGA+AGG | 0.461089 | tig0028915:-48968 | Msa1439910:intergenic |
| GGTGGAGGTGGAGATGGTGG+TGG | 0.462941 | tig0028915:-48498 | Msa1439910:intergenic |
| ACCAACGATACTGATAAATT+CGG | 0.463808 | tig0028915:+49328 | Msa1439910:CDS |
| GCTTCGAGTTCCAGGTAGAA+TGG | 0.465025 | tig0028915:+49997 | Msa1439910:CDS |
| ATCCCAAGTTGTAGGAGCAC+AGG | 0.466211 | tig0028915:-50035 | Msa1439910:intergenic |
| GCCGCTGATCTTTGCTTCTA+CGG | 0.466510 | tig0028915:+49154 | Msa1439910:CDS |
| TCCGGTGATCATTGGGGCGC+CGG | 0.466791 | tig0028915:+49301 | Msa1439910:CDS |
| GAAGCAAAGATCAGCGGCGG+AGG | 0.466839 | tig0028915:-49149 | Msa1439910:intergenic |
| GGGAAAAGATGGGGTTGGAG+TGG | 0.469522 | tig0028915:-48522 | Msa1439910:intergenic |
| TGAATTACATTTCAGTAATG+AGG | 0.471503 | tig0028915:-50105 | Msa1439910:intergenic |
| AAGTGCTATGAAGGCATTGA+AGG | 0.475925 | tig0028915:+49970 | Msa1439910:CDS |
| CTTCTTCCTTCCTCCTCCTC+CGG | 0.480357 | tig0028915:+48916 | Msa1439910:CDS |
| CCAGAGCAACTTTATTCTGT+TGG | 0.485444 | tig0028915:+52071 | Msa1439910:CDS |
| CACCGTGAATGGTACTGAAA+AGG | 0.486056 | tig0028915:+49423 | Msa1439910:CDS |
| GGTAGAGTTTCGTGCGGCTC+CGG | 0.486410 | tig0028915:+49283 | Msa1439910:CDS |
| TATGGTGTGGCTGCATTTCG+CGG | 0.487390 | tig0028915:+49543 | Msa1439910:CDS |
| GGATGCGAAGATGGACTATA+TGG | 0.488407 | tig0028915:+49525 | Msa1439910:CDS |
| TGAAGCATTCCGAACCGAAC+CGG | 0.490845 | tig0028915:+49369 | Msa1439910:CDS |
| TGGCTCCGAGACGGTGGTGG+TGG | 0.492848 | tig0028915:-48858 | Msa1439910:intergenic |
| ATTCGGCCGGTCATGGCAGC+CGG | 0.496081 | tig0028915:+49345 | Msa1439910:CDS |
| CTGATAAATTCGGCCGGTCA+TGG | 0.496522 | tig0028915:+49338 | Msa1439910:CDS |
| CTTCGAGTTCCAGGTAGAAT+GGG | 0.507791 | tig0028915:+49998 | Msa1439910:CDS |
| TCCGATGAAGCTTTACCAAA+CGG | 0.508588 | tig0028915:+49459 | Msa1439910:CDS |
| AGCATAAGCGCCGTCGCGTG+CGG | 0.511148 | tig0028915:-49101 | Msa1439910:intergenic |
| CCATTCCATCCCATTCTACC+TGG | 0.511572 | tig0028915:-50007 | Msa1439910:intergenic |
| GCTATTGAATGGTAACCTAC+TGG | 0.511811 | tig0028915:+52037 | Msa1439910:CDS |
| TTTATCATCACTCATACGGC+AGG | 0.512655 | tig0028915:-50074 | Msa1439910:intergenic |
| TTCAGAAATCTTGGCAGTCA+AGG | 0.513349 | tig0028915:+50521 | Msa1439910:intron |
| AGACGGTGAAGGTGCGGAGG+AGG | 0.514997 | tig0028915:-48982 | Msa1439910:intergenic |
| TCGGTTCGGAATGCTTCATC+CGG | 0.517203 | tig0028915:-49364 | Msa1439910:intergenic |
| GCCGCAGTTAATGTGGTATG+AGG | 0.519419 | tig0028915:-48768 | Msa1439910:intergenic |
| TTTCTGAGGGGAGGTTGAAA+CGG | 0.521325 | tig0028915:-48883 | Msa1439910:intergenic |
| ATTGAGTGTGGATGCGAAGA+TGG | 0.522264 | tig0028915:+49516 | Msa1439910:CDS |
| TCCCAAGCATCCCAAGTTGT+AGG | 0.527416 | tig0028915:-50043 | Msa1439910:intergenic |
| CGTGCGGTGGATTCAGGCCA+TGG | 0.528228 | tig0028915:-49085 | Msa1439910:intergenic |
| TCAACAGAGAACACCGTGAA+TGG | 0.531402 | tig0028915:+49412 | Msa1439910:CDS |
| GAGTGGCTCCGAGACGGTGG+TGG | 0.532985 | tig0028915:-48861 | Msa1439910:intergenic |
| AACTTCATTCTTGTTAACTA+CGG | 0.533727 | tig0028915:+49262 | Msa1439910:CDS |
| TTGGCAGTCAAGGCTTAAAA+GGG | 0.533821 | tig0028915:+50531 | Msa1439910:CDS |
| GAGAGCCATGTTGTGTTGAA+GGG | 0.540481 | tig0028915:-48812 | Msa1439910:intergenic |
| AACGGCGGTGACGACGGAGG+AGG | 0.541688 | tig0028915:+49477 | Msa1439910:CDS |
| GTAGCGAGAAGAAGGAAGAG+GGG | 0.542842 | tig0028915:-48960 | Msa1439910:intergenic |
| GCCGAATTTATCAGTATCGT+TGG | 0.543701 | tig0028915:-49329 | Msa1439910:intergenic |
| CGGCGCCACCACCACCGTCT+CGG | 0.543708 | tig0028915:+48853 | Msa1439910:CDS |
| ATAAGCGCCGTCGCGTGCGG+TGG | 0.545907 | tig0028915:-49098 | Msa1439910:intergenic |
| TGCGTCGTAGTTGTCGTAGA+CGG | 0.549286 | tig0028915:-48999 | Msa1439910:intergenic |
| GCCGTTTGGTAAAGCTTCAT+CGG | 0.551037 | tig0028915:-49460 | Msa1439910:intergenic |
| GTCTCTGCCAGGCTATTGAA+TGG | 0.551585 | tig0028915:+52026 | Msa1439910:intron |
| TGGCGCCGCCGGTGTAGTAA+CGG | 0.555587 | tig0028915:-48838 | Msa1439910:intergenic |
| CCAACAGAATAAAGTTGCTC+TGG | 0.556512 | tig0028915:-52071 | Msa1439910:intergenic |
| CCTGAATCCACCGCACGCGA+CGG | 0.556852 | tig0028915:+49091 | Msa1439910:CDS |
| TCCCTGTGCTCCTACAACTT+GGG | 0.557396 | tig0028915:+50033 | Msa1439910:CDS |
| CCTTGAAGAGGGTGAGTGGA+AGG | 0.559241 | tig0028915:-49798 | Msa1439910:intergenic |
| GTAGTTGTCGTAGACGGTGA+AGG | 0.560473 | tig0028915:-48993 | Msa1439910:intergenic |
| GTACGAAGAGGCGAGATTAG+CGG | 0.562902 | tig0028915:-48349 | Msa1439910:intergenic |
| GAGGAGGAGGAAGGAAGAAG+CGG | 0.563240 | tig0028915:-48913 | Msa1439910:intergenic |
| CCAGGTAGAATGGGATGGAA+TGG | 0.563862 | tig0028915:+50007 | Msa1439910:CDS |
| GAGAGTGCAACGTCGAAGGA+AGG | 0.564368 | tig0028915:-49034 | Msa1439910:intergenic |
| GGAGGAGAGTGCAACGTCGA+AGG | 0.568653 | tig0028915:-49038 | Msa1439910:intergenic |
| AAGAAGGAGAGGAAGAAATG+GGG | 0.572907 | tig0028915:-48464 | Msa1439910:intergenic |
| CCAGAGGGAAAAGATGGGGT+TGG | 0.573200 | tig0028915:-48527 | Msa1439910:intergenic |
| GAGTTCCAGGTAGAATGGGA+TGG | 0.574326 | tig0028915:+50002 | Msa1439910:CDS |
| GCCGGCGCCCCAATGATCAC+CGG | 0.581569 | tig0028915:-49302 | Msa1439910:intergenic |
| TATTCTGTTGGCGTGCACGG+TGG | 0.583936 | tig0028915:+52083 | Msa1439910:CDS |
| TGATGATGAATAAGAAGGAG+AGG | 0.585170 | tig0028915:-48475 | Msa1439910:intergenic |
| CCAGTTGAAAATGATGGTGG+AGG | 0.589159 | tig0028915:-49056 | Msa1439910:intergenic |
| AAAACCTTGAAGAGGGTGAG+TGG | 0.590546 | tig0028915:-49802 | Msa1439910:intergenic |
| AAGCAAAGATCAGCGGCGGA+GGG | 0.590897 | tig0028915:-49148 | Msa1439910:intergenic |
| CTGGCACTCGTCCTTCCAGT+AGG | 0.596614 | tig0028915:-52052 | Msa1439910:intergenic |
| GCCGCCGGTGTAGTAACGGT+CGG | 0.600805 | tig0028915:-48834 | Msa1439910:intergenic |
| AGTTCGATTGATGAGATGAT+CGG | 0.602669 | tig0028915:-49193 | Msa1439910:intergenic |
| TCGTATGATTCTAACTCCAC+CGG | 0.607134 | tig0028915:+49235 | Msa1439910:CDS |
| TGATGAGATGATCGGAGCAT+CGG | 0.608101 | tig0028915:-49185 | Msa1439910:intergenic |
| AGTTACCAGAGGGAAAAGAT+GGG | 0.609275 | tig0028915:-48532 | Msa1439910:intergenic |
| TTCTCAATACCACAAATCAA+AGG | 0.615729 | tig0028915:-49753 | Msa1439910:intergenic |
| TCCCAAGTTGTAGGAGCACA+GGG | 0.616318 | tig0028915:-50034 | Msa1439910:intergenic |
| ACGGAGTGGCTCCGAGACGG+TGG | 0.622129 | tig0028915:-48864 | Msa1439910:intergenic |
| CAGACCCCTTCAACACAACA+TGG | 0.622219 | tig0028915:+48807 | Msa1439910:CDS |
| TGGTATTGAGAATTATGCAT+TGG | 0.622429 | tig0028915:+49764 | Msa1439910:CDS |
| AGAGCCATGTTGTGTTGAAG+GGG | 0.622435 | tig0028915:-48811 | Msa1439910:intergenic |
| GAAACGGAGTGGCTCCGAGA+CGG | 0.624248 | tig0028915:-48867 | Msa1439910:intergenic |
| TGTCGTAGACGGTGAAGGTG+CGG | 0.624271 | tig0028915:-48988 | Msa1439910:intergenic |
| TTACCAAACGGCGGTGACGA+CGG | 0.624674 | tig0028915:+49471 | Msa1439910:CDS |
| TTGAAGTGCCGCAGTTAATG+TGG | 0.625396 | tig0028915:-48775 | Msa1439910:intergenic |
| AGAACGCCAGTTGAAAATGA+TGG | 0.627133 | tig0028915:-49062 | Msa1439910:intergenic |
| ACAACTTGGGATGCTTGGGA+AGG | 0.628183 | tig0028915:+50046 | Msa1439910:CDS |
| CGTAGACGGTGAAGGTGCGG+AGG | 0.629380 | tig0028915:-48985 | Msa1439910:intergenic |
| CAAACTGTCAGGTATAGAGC+CGG | 0.630464 | tig0028915:-51631 | Msa1439910:intergenic |
| GACGACGGAGGAGGAGACGT+TGG | 0.639543 | tig0028915:+49486 | Msa1439910:CDS |
| AGTGCAACGTCGAAGGAAGG+AGG | 0.640604 | tig0028915:-49031 | Msa1439910:intergenic |
| CTCTCCGACCGTTACTACAC+CGG | 0.643735 | tig0028915:+48830 | Msa1439910:CDS |
| GGTGGTGATGATGAATAAGA+AGG | 0.644775 | tig0028915:-48480 | Msa1439910:intergenic |
| ACGCCAGTTGAAAATGATGG+TGG | 0.648693 | tig0028915:-49059 | Msa1439910:intergenic |
| GCCGTAGAAGCAAAGATCAG+CGG | 0.649920 | tig0028915:-49155 | Msa1439910:intergenic |
| ACGATACTGATAAATTCGGC+CGG | 0.650645 | tig0028915:+49332 | Msa1439910:CDS |
| GTAGAAGCAAAGATCAGCGG+CGG | 0.656543 | tig0028915:-49152 | Msa1439910:intergenic |
| TTGAATGGTAACCTACTGGA+AGG | 0.662357 | tig0028915:+52041 | Msa1439910:CDS |
| GAGGGGAGGTTGAAACGGAG+TGG | 0.668857 | tig0028915:-48878 | Msa1439910:intergenic |
| TGCGGCTCCGGTGATCATTG+GGG | 0.670365 | tig0028915:+49295 | Msa1439910:CDS |
| CCAAACGGCGGTGACGACGG+AGG | 0.673808 | tig0028915:+49474 | Msa1439910:CDS |
| TCCGACCGTTACTACACCGG+CGG | 0.678732 | tig0028915:+48833 | Msa1439910:CDS |
| AACTACGGTAGAGTTTCGTG+CGG | 0.685030 | tig0028915:+49277 | Msa1439910:CDS |
| GTTACCAGAGGGAAAAGATG+GGG | 0.689689 | tig0028915:-48531 | Msa1439910:intergenic |
| TCCTCATACCACATTAACTG+CGG | 0.690190 | tig0028915:+48767 | Msa1439910:CDS |
| GGAGTTAGAATCATACGAAG+CGG | 0.698239 | tig0028915:-49230 | Msa1439910:intergenic |
| GTTGGAGTACGAATTGAGTG+TGG | 0.722672 | tig0028915:+49504 | Msa1439910:CDS |
| GATGAAGCTTTACCAAACGG+CGG | 0.725813 | tig0028915:+49462 | Msa1439910:CDS |
| CGAAGATGGACTATATGGTG+TGG | 0.730949 | tig0028915:+49530 | Msa1439910:CDS |
| TGTGTGTGTATTGTACGAAG+AGG | 0.734204 | tig0028915:-48361 | Msa1439900:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGCAAAATTAAAAAATGA+CGG | + | tig0028915:48648-48667 | Msa1439910:intron | 15.0% |
| !!! | AAGTATTTTTTTTTCTTTCT+CGG | + | tig0028915:49834-49853 | Msa1439910:intron | 15.0% |
| !! | GAAAAGTTACAATTATATAA+CGG | - | tig0028915:51037-51056 | Msa1439910:intergenic | 15.0% |
| !! | TTTATAATTGTAAATGACTT+TGG | - | tig0028915:51399-51418 | Msa1439910:intergenic | 15.0% |
| !!! | ATTTAATTAAATTTTCCTTC+TGG | - | tig0028915:51542-51561 | Msa1439910:intergenic | 15.0% |
| !!! | TTTCCATTCAAAATATTTTC+AGG | + | tig0028915:48737-48756 | Msa1439910:intron | 20.0% |
| !!! | TTACCTGAAAATATTTTGAA+TGG | - | tig0028915:48743-48762 | Msa1439910:intergenic | 20.0% |
| !!! | AAATTTGAGTAGTAATGTTT+TGG | + | tig0028915:49701-49720 | Msa1439910:CDS | 20.0% |
| !!! | AATTTGAGTAGTAATGTTTT+GGG | + | tig0028915:49702-49721 | Msa1439910:CDS | 20.0% |
| !! | GAAAAAAAAATACTTGTAAG+AGG | - | tig0028915:49829-49848 | Msa1439910:intergenic | 20.0% |
| !! | TTACAAATCTAGATTAATCA+TGG | - | tig0028915:50691-50710 | Msa1439910:intergenic | 20.0% |
| !! | ACAATATTTATCTTCTGATA+TGG | + | tig0028915:50830-50849 | Msa1439910:intron | 20.0% |
| !!! | GTATCTTTCTAGATTAATTT+TGG | + | tig0028915:50993-51012 | Msa1439910:intron | 20.0% |
| !! | ATAACATCTAAAAAAAGACT+GGG | - | tig0028915:51177-51196 | Msa1439910:intergenic | 20.0% |
| !! | AATAACATCTAAAAAAAGAC+TGG | - | tig0028915:51178-51197 | Msa1439910:intergenic | 20.0% |
| !! | TTCTAAATGAGTGAAAATAT+TGG | - | tig0028915:51262-51281 | Msa1439910:intergenic | 20.0% |
| !!! | TTTTCATACATATCTTTTCT+AGG | + | tig0028915:51350-51369 | Msa1439910:intron | 20.0% |
| !! | TTGAAATCAAATTTCAAAAC+TGG | - | tig0028915:51793-51812 | Msa1439910:intergenic | 20.0% |
| !! | TAAATATACGAAGAGAAATA+CGG | - | tig0028915:51915-51934 | Msa1439910:intergenic | 20.0% |
| ! | AACTTCATTCTTGTTAACTA+CGG | + | tig0028915:49262-49281 | Msa1439910:CDS | 25.0% |
| !!! | AGTTTTGATGTGTTTATCAA+TGG | + | tig0028915:49602-49621 | Msa1439910:intron | 25.0% |
| !! | AGTTGATATTTACAAAGAAG+TGG | + | tig0028915:49640-49659 | Msa1439910:intron | 25.0% |
| ! | GTTGATATTTACAAAGAAGT+GGG | + | tig0028915:49641-49660 | Msa1439910:intron | 25.0% |
| !! | ATTTGAGTAGTAATGTTTTG+GGG | + | tig0028915:49703-49722 | Msa1439910:CDS | 25.0% |
| ! | TGAATTACATTTCAGTAATG+AGG | - | tig0028915:50108-50127 | Msa1439910:intergenic | 25.0% |
| !! | TACCATTTGATCATTTTATG+AGG | + | tig0028915:50255-50274 | Msa1439910:intron | 25.0% |
| ! | TTCCTCATAAAATGATCAAA+TGG | - | tig0028915:50260-50279 | Msa1439910:intergenic | 25.0% |
| !! | ATTTGATCATTTTATGAGGA+AGG | + | tig0028915:50259-50278 | Msa1439910:intron | 25.0% |
| ! | AATGGTAGAATAGGTTTAAT+TGG | + | tig0028915:50375-50394 | Msa1439910:intron | 25.0% |
| ! | AGGTTTAATTGGTAGAAAAA+TGG | + | tig0028915:50386-50405 | Msa1439910:intron | 25.0% |
| ! | TTAATTGGTAGAAAAATGGA+CGG | + | tig0028915:50390-50409 | Msa1439910:intron | 25.0% |
| !! | CATTTTCATTTCAGAAATCT+TGG | + | tig0028915:50512-50531 | Msa1439910:intron | 25.0% |
| ! | ATGCAAGATGTAAAGAAATT+AGG | - | tig0028915:50618-50637 | Msa1439910:intergenic | 25.0% |
| !! | TAATTTTACCACATGTTTAG+TGG | + | tig0028915:50708-50727 | Msa1439910:intron | 25.0% |
| !!! | AAAGCTGATCATTTTGAAAA+AGG | - | tig0028915:50789-50808 | Msa1439910:intergenic | 25.0% |
| !!! | TTTTTCAAAATGATCAGCTT+TGG | + | tig0028915:50788-50807 | Msa1439910:intron | 25.0% |
| ! | GATAGAATAATGATGTACAA+TGG | + | tig0028915:50864-50883 | Msa1439910:intron | 25.0% |
| ! | CAATCATCATATACTGAATA+CGG | + | tig0028915:51299-51318 | Msa1439910:intron | 25.0% |
| ! | TTATCCAATAATCACTTAAC+CGG | + | tig0028915:51612-51631 | Msa1439910:CDS | 25.0% |
| ! | ATGATAACTCGACAATAAAA+AGG | + | tig0028915:51733-51752 | Msa1439910:intron | 25.0% |
| ! | CAAATTTCAAAACTGGATTA+CGG | - | tig0028915:51786-51805 | Msa1439910:intergenic | 25.0% |
| ! | ATTAACAAAACCAAATGACT+AGG | - | tig0028915:51825-51844 | Msa1439910:intergenic | 25.0% |
| !! | GAGAGGTTTGTTACATAAAA+GGG | - | tig0028915:48390-48409 | None:intergenic | 30.0% |
| !! | AGAGAGGTTTGTTACATAAA+AGG | - | tig0028915:48391-48410 | None:intergenic | 30.0% |
| TAAAAAATGACGGTAACTCA+TGG | + | tig0028915:48658-48677 | Msa1439910:intron | 30.0% | |
| AACTTAATCAATCAAGCACT+TGG | + | tig0028915:48692-48711 | Msa1439910:intron | 30.0% | |
| ! | AACAAGAATGAAGTTTTCAC+CGG | - | tig0028915:49257-49276 | Msa1439910:intergenic | 30.0% |
| ACCAACGATACTGATAAATT+CGG | + | tig0028915:49328-49347 | Msa1439910:CDS | 30.0% | |
| AAAACTCTGACAATTTCTTC+CGG | - | tig0028915:49391-49410 | Msa1439910:intergenic | 30.0% | |
| AGCTTCATCGGAAAATAATT+CGG | - | tig0028915:49451-49470 | Msa1439910:intergenic | 30.0% | |
| GATTCAAGTGTGAAAAAAGA+AGG | + | tig0028915:49571-49590 | Msa1439910:intron | 30.0% | |
| !!! | AAGTTTTTGCTGCTTTTACT+TGG | + | tig0028915:49664-49683 | Msa1439910:CDS | 30.0% |
| TTCTCAATACCACAAATCAA+AGG | - | tig0028915:49756-49775 | Msa1439910:intergenic | 30.0% | |
| ! | TGGTATTGAGAATTATGCAT+TGG | + | tig0028915:49764-49783 | Msa1439910:CDS | 30.0% |
| !!! | TTTTTTCTTTCTCGGATTGA+AGG | + | tig0028915:49842-49861 | Msa1439910:intron | 30.0% |
| TGTGTGTGATTTATAGCTTA+TGG | + | tig0028915:49931-49950 | Msa1439910:intron | 30.0% | |
| GTGTGTGATTTATAGCTTAT+GGG | + | tig0028915:49932-49951 | Msa1439910:intron | 30.0% | |
| ! | TTTTGTAGTAAGTGCTATGA+AGG | + | tig0028915:49961-49980 | Msa1439910:intron | 30.0% |
| !! | CAGTTTTATCATCACTCATA+CGG | - | tig0028915:50081-50100 | Msa1439910:intergenic | 30.0% |
| AGAGCAAAATAGCAGAAAAT+TGG | - | tig0028915:50137-50156 | Msa1439910:intergenic | 30.0% | |
| CTTGGAACATGAAATGTTTA+TGG | - | tig0028915:50183-50202 | Msa1439910:intergenic | 30.0% | |
| AAACATTTCATGTTCCAAGT+AGG | + | tig0028915:50184-50203 | Msa1439910:intron | 30.0% | |
| TTAACCTTACACTTGACTAA+AGG | - | tig0028915:50357-50376 | Msa1439910:intergenic | 30.0% | |
| TTAGTCAAGTGTAAGGTTAA+TGG | + | tig0028915:50357-50376 | Msa1439910:intron | 30.0% | |
| TGTAAGGTTAATGGTAGAAT+AGG | + | tig0028915:50366-50385 | Msa1439910:intron | 30.0% | |
| ! | ACATTCGTTTGAAATCTTGT+CGG | + | tig0028915:50429-50448 | Msa1439910:intron | 30.0% |
| TTTCCTTGCATAATGAACTT+CGG | + | tig0028915:50464-50483 | Msa1439910:intron | 30.0% | |
| !!! | GATTAGTCTTTTGTCAGATT+TGG | + | tig0028915:50568-50587 | Msa1439910:CDS | 30.0% |
| ATTAAAATCCTTGCAATTGC+TGG | - | tig0028915:50929-50948 | Msa1439910:intergenic | 30.0% | |
| TGTTAAAGAACTCAATTGAG+TGG | + | tig0028915:51212-51231 | Msa1439910:intron | 30.0% | |
| !! | TGACTTTGGAGTTTAAATTC+AGG | - | tig0028915:51385-51404 | Msa1439910:intergenic | 30.0% |
| ! | ACTATGAAGTGCTCAATAAA+TGG | + | tig0028915:51457-51476 | Msa1439910:intron | 30.0% |
| ! | CTATGAAGTGCTCAATAAAT+GGG | + | tig0028915:51458-51477 | Msa1439910:intron | 30.0% |
| ! | TATGAAGTGCTCAATAAATG+GGG | + | tig0028915:51459-51478 | Msa1439910:intron | 30.0% |
| ! | TTTCTCTGTAATGTTTCTGT+AGG | + | tig0028915:51586-51605 | Msa1439910:intron | 30.0% |
| ! | TTCTCTGTAATGTTTCTGTA+GGG | + | tig0028915:51587-51606 | Msa1439910:intron | 30.0% |
| AATCATCTTTCCTAGTCATT+TGG | + | tig0028915:51812-51831 | Msa1439910:intron | 30.0% | |
| ! | TGTTGCCAATATATTTTTCC+TGG | + | tig0028915:51864-51883 | Msa1439910:intron | 30.0% |
| CAGATCCAGGAAAAATATAT+TGG | - | tig0028915:51872-51891 | Msa1439910:intergenic | 30.0% | |
| ! | CAATATATTTTTCCTGGATC+TGG | + | tig0028915:51870-51889 | Msa1439910:intron | 30.0% |
| GAAAAAAGTGAGAATGAGAG+AGG | - | tig0028915:48407-48426 | None:intergenic | 35.0% | |
| TAAGAAGGAGAGGAAGAAAT+GGG | - | tig0028915:48468-48487 | None:intergenic | 35.0% | |
| ATAAGAAGGAGAGGAAGAAA+TGG | - | tig0028915:48469-48488 | None:intergenic | 35.0% | |
| ! | TGATGATGAATAAGAAGGAG+AGG | - | tig0028915:48478-48497 | None:intergenic | 35.0% |
| !! | ACCAAACATGCAAAAGTACT+CGG | - | tig0028915:48564-48583 | Msa1439910:intergenic | 35.0% |
| ACGGTAACTCATGGTAATTT+CGG | + | tig0028915:48667-48686 | Msa1439910:intron | 35.0% | |
| !!! | TGAGTAGCAGTTTTTTTTGC+CGG | - | tig0028915:48938-48957 | Msa1439910:intergenic | 35.0% |
| AGTTCGATTGATGAGATGAT+CGG | - | tig0028915:49196-49215 | Msa1439910:intergenic | 35.0% | |
| !! | ATTAAGCTTGTTGCTGTTTC+TGG | + | tig0028915:49726-49745 | Msa1439910:CDS | 35.0% |
| AAGAGGAAAAACCTTGAAGA+GGG | - | tig0028915:49812-49831 | Msa1439910:intergenic | 35.0% | |
| TAAGAGGAAAAACCTTGAAG+AGG | - | tig0028915:49813-49832 | Msa1439910:intergenic | 35.0% | |
| TTATGTATTCAGCACCTACT+TGG | - | tig0028915:50201-50220 | Msa1439910:intergenic | 35.0% | |
| AGCGTGTGTATATAATCATG+AGG | - | tig0028915:50329-50348 | Msa1439910:intergenic | 35.0% | |
| TTCCTTGCATAATGAACTTC+GGG | + | tig0028915:50465-50484 | Msa1439910:intron | 35.0% | |
| TTCAATACATCTAAACCGCA+CGG | - | tig0028915:50642-50661 | Msa1439910:intergenic | 35.0% | |
| !!! | TGCTCAGTGTTTTAAGTTGA+GGG | - | tig0028915:50765-50784 | Msa1439910:intergenic | 35.0% |
| !!! | ATGCTCAGTGTTTTAAGTTG+AGG | - | tig0028915:50766-50785 | Msa1439910:intergenic | 35.0% |
| ! | CTTTGGTACTTTCATTTTCG+TGG | + | tig0028915:50805-50824 | Msa1439910:intron | 35.0% |
| TTCATTCCTCAAGTAAATGC+AGG | - | tig0028915:50897-50916 | Msa1439910:intergenic | 35.0% | |
| !! | AATTTTGGTCATGTCCATAG+TGG | + | tig0028915:51008-51027 | Msa1439910:intron | 35.0% |
| !! | ATTTTGGTCATGTCCATAGT+GGG | + | tig0028915:51009-51028 | Msa1439910:intron | 35.0% |
| ! | TTATATAACGGAACCCACTA+TGG | - | tig0028915:51025-51044 | Msa1439910:intergenic | 35.0% |
| AAACTTGAGTTCGAATTCCT+TGG | + | tig0028915:51070-51089 | Msa1439910:intron | 35.0% | |
| AACTTGAGTTCGAATTCCTT+GGG | + | tig0028915:51071-51090 | Msa1439910:intron | 35.0% | |
| CTGATCTTACACTTGTATCA+GGG | - | tig0028915:51129-51148 | Msa1439910:intergenic | 35.0% | |
| TCTGATCTTACACTTGTATC+AGG | - | tig0028915:51130-51149 | Msa1439910:intergenic | 35.0% | |
| GTTCTGTTCATAATACCAGA+AGG | + | tig0028915:51524-51543 | Msa1439910:intron | 35.0% | |
| AACATGCATAAAAGAGACAC+AGG | - | tig0028915:51981-52000 | Msa1439910:intergenic | 35.0% | |
| TTATAATGATTGTCTCTGCC+AGG | + | tig0028915:52015-52034 | Msa1439910:intron | 35.0% | |
| TGTGTGTGTATTGTACGAAG+AGG | - | tig0028915:48364-48383 | None:intergenic | 40.0% | |
| AAGAAGGAGAGGAAGAAATG+GGG | - | tig0028915:48467-48486 | None:intergenic | 40.0% | |
| ! | GGTGGTGATGATGAATAAGA+AGG | - | tig0028915:48483-48502 | None:intergenic | 40.0% |
| AGTTACCAGAGGGAAAAGAT+GGG | - | tig0028915:48535-48554 | Msa1439910:intergenic | 40.0% | |
| TAGTTACCAGAGGGAAAAGA+TGG | - | tig0028915:48536-48555 | Msa1439910:intergenic | 40.0% | |
| ! | ACCGAGTACTTTTGCATGTT+TGG | + | tig0028915:48560-48579 | Msa1439910:intron | 40.0% |
| TCCTCATACCACATTAACTG+CGG | + | tig0028915:48767-48786 | Msa1439910:CDS | 40.0% | |
| !!! | AAGCGGAGAGTTTTTTCTGA+GGG | - | tig0028915:48899-48918 | Msa1439910:intergenic | 40.0% |
| AGAACGCCAGTTGAAAATGA+TGG | - | tig0028915:49065-49084 | Msa1439910:intergenic | 40.0% | |
| TCATACGAAGCGGAATTTAC+AGG | - | tig0028915:49223-49242 | Msa1439910:intergenic | 40.0% | |
| GGAGTTAGAATCATACGAAG+CGG | - | tig0028915:49233-49252 | Msa1439910:intergenic | 40.0% | |
| TCGTATGATTCTAACTCCAC+CGG | + | tig0028915:49235-49254 | Msa1439910:CDS | 40.0% | |
| ! | AAGAATGAAGTTTTCACCGG+TGG | - | tig0028915:49254-49273 | Msa1439910:intergenic | 40.0% |
| GCCGAATTTATCAGTATCGT+TGG | - | tig0028915:49332-49351 | Msa1439910:intergenic | 40.0% | |
| ACGATACTGATAAATTCGGC+CGG | + | tig0028915:49332-49351 | Msa1439910:CDS | 40.0% | |
| TCTGACAATTTCTTCCGGTT+CGG | - | tig0028915:49386-49405 | Msa1439910:intergenic | 40.0% | |
| ! | CTCCTTTTCAGTACCATTCA+CGG | - | tig0028915:49428-49447 | Msa1439910:intergenic | 40.0% |
| TCCGATGAAGCTTTACCAAA+CGG | + | tig0028915:49459-49478 | Msa1439910:CDS | 40.0% | |
| !! | AAGTGCTATGAAGGCATTGA+AGG | + | tig0028915:49970-49989 | Msa1439910:CDS | 40.0% |
| TTTATCATCACTCATACGGC+AGG | - | tig0028915:50077-50096 | Msa1439910:intergenic | 40.0% | |
| TTGGTAGAAAAATGGACGGA+TGG | + | tig0028915:50394-50413 | Msa1439910:intron | 40.0% | |
| TAGAAAAATGGACGGATGGA+TGG | + | tig0028915:50398-50417 | Msa1439910:intron | 40.0% | |
| TACCCGAAGTTCATTATGCA+AGG | - | tig0028915:50470-50489 | Msa1439910:intergenic | 40.0% | |
| TTCAGAAATCTTGGCAGTCA+AGG | + | tig0028915:50521-50540 | Msa1439910:intron | 40.0% | |
| TTGGCAGTCAAGGCTTAAAA+GGG | + | tig0028915:50531-50550 | Msa1439910:CDS | 40.0% | |
| TTTACATCTTGCATACCGTG+CGG | + | tig0028915:50624-50643 | Msa1439910:intron | 40.0% | |
| ! | CTAGAGTACCACTAAACATG+TGG | - | tig0028915:50719-50738 | Msa1439910:intergenic | 40.0% |
| TGCTGCACACAATTCAGAAA+AGG | - | tig0028915:50972-50991 | Msa1439910:intergenic | 40.0% | |
| ACTTGAGTTCGAATTCCTTG+GGG | + | tig0028915:51072-51091 | Msa1439910:intron | 40.0% | |
| GAGCACTTCATAGTTGTGTT+GGG | - | tig0028915:51451-51470 | Msa1439910:intergenic | 40.0% | |
| TGAGCACTTCATAGTTGTGT+TGG | - | tig0028915:51452-51471 | Msa1439910:intergenic | 40.0% | |
| AGAGCCGGTTAAGTGATTAT+TGG | - | tig0028915:51619-51638 | Msa1439910:intergenic | 40.0% | |
| TACGAAGAGAAATACGGTTG+CGG | - | tig0028915:51909-51928 | Msa1439910:intergenic | 40.0% | |
| TAGGTTACCATTCAATAGCC+TGG | - | tig0028915:52036-52055 | Msa1439910:intergenic | 40.0% | |
| GCTATTGAATGGTAACCTAC+TGG | + | tig0028915:52037-52056 | Msa1439910:CDS | 40.0% | |
| TTGAATGGTAACCTACTGGA+AGG | + | tig0028915:52041-52060 | Msa1439910:CDS | 40.0% | |
| CCAACAGAATAAAGTTGCTC+TGG | - | tig0028915:52074-52093 | Msa1439910:intergenic | 40.0% | |
| CCAGAGCAACTTTATTCTGT+TGG | + | tig0028915:52071-52090 | Msa1439910:CDS | 40.0% | |
| GTTACCAGAGGGAAAAGATG+GGG | - | tig0028915:48534-48553 | Msa1439910:intergenic | 45.0% | |
| TCGGTAGAGTAGTTACCAGA+GGG | - | tig0028915:48545-48564 | Msa1439910:intergenic | 45.0% | |
| !! | TTGAAGTGCCGCAGTTAATG+TGG | - | tig0028915:48778-48797 | Msa1439910:intergenic | 45.0% |
| AGAGCCATGTTGTGTTGAAG+GGG | - | tig0028915:48814-48833 | Msa1439910:intergenic | 45.0% | |
| GAGAGCCATGTTGTGTTGAA+GGG | - | tig0028915:48815-48834 | Msa1439910:intergenic | 45.0% | |
| ! | TTTCTGAGGGGAGGTTGAAA+CGG | - | tig0028915:48886-48905 | Msa1439910:intergenic | 45.0% |
| !!! | AGCGGAGAGTTTTTTCTGAG+GGG | - | tig0028915:48898-48917 | Msa1439910:intergenic | 45.0% |
| !!! | GAAGCGGAGAGTTTTTTCTG+AGG | - | tig0028915:48900-48919 | Msa1439910:intergenic | 45.0% |
| !!! | GTAGCAGTTTTTTTTGCCGG+AGG | - | tig0028915:48935-48954 | Msa1439910:intergenic | 45.0% |
| !! | CCAGTTGAAAATGATGGTGG+AGG | - | tig0028915:49059-49078 | Msa1439910:intergenic | 45.0% |
| ! | CCTCCACCATCATTTTCAAC+TGG | + | tig0028915:49056-49075 | Msa1439910:CDS | 45.0% |
| ACGCCAGTTGAAAATGATGG+TGG | - | tig0028915:49062-49081 | Msa1439910:intergenic | 45.0% | |
| ! | TTTTCAACTGGCGTTCTCCA+TGG | + | tig0028915:49068-49087 | Msa1439910:CDS | 45.0% |
| TGATGAGATGATCGGAGCAT+CGG | - | tig0028915:49188-49207 | Msa1439910:intergenic | 45.0% | |
| AACTACGGTAGAGTTTCGTG+CGG | + | tig0028915:49277-49296 | Msa1439910:CDS | 45.0% | |
| ! | ATCAGTATCGTTGGTGAAGC+CGG | - | tig0028915:49323-49342 | Msa1439910:intergenic | 45.0% |
| !! | CAATTTCTTCCGGTTCGGTT+CGG | - | tig0028915:49381-49400 | Msa1439910:intergenic | 45.0% |
| TCAACAGAGAACACCGTGAA+TGG | + | tig0028915:49412-49431 | Msa1439910:CDS | 45.0% | |
| ! | CACCGTGAATGGTACTGAAA+AGG | + | tig0028915:49423-49442 | Msa1439910:CDS | 45.0% |
| GCCGTTTGGTAAAGCTTCAT+CGG | - | tig0028915:49463-49482 | Msa1439910:intergenic | 45.0% | |
| GATGAAGCTTTACCAAACGG+CGG | + | tig0028915:49462-49481 | Msa1439910:CDS | 45.0% | |
| GTTGGAGTACGAATTGAGTG+TGG | + | tig0028915:49504-49523 | Msa1439910:CDS | 45.0% | |
| ATTGAGTGTGGATGCGAAGA+TGG | + | tig0028915:49516-49535 | Msa1439910:CDS | 45.0% | |
| !! | GGATGCGAAGATGGACTATA+TGG | + | tig0028915:49525-49544 | Msa1439910:CDS | 45.0% |
| !! | CGAAGATGGACTATATGGTG+TGG | + | tig0028915:49530-49549 | Msa1439910:CDS | 45.0% |
| !! | TCTGGTGCTCCTTTGATTTG+TGG | + | tig0028915:49744-49763 | Msa1439910:CDS | 45.0% |
| AAAACCTTGAAGAGGGTGAG+TGG | - | tig0028915:49805-49824 | Msa1439910:intergenic | 45.0% | |
| ! | CTTCGAGTTCCAGGTAGAAT+GGG | + | tig0028915:49998-50017 | Msa1439910:CDS | 45.0% |
| TCCTACAACTTGGGATGCTT+GGG | + | tig0028915:50042-50061 | Msa1439910:CDS | 45.0% | |
| CCTTACACTTGACTAAAGGC+AGG | - | tig0028915:50353-50372 | Msa1439910:intergenic | 45.0% | |
| CCTGCCTTTAGTCAAGTGTA+AGG | + | tig0028915:50350-50369 | Msa1439910:intron | 45.0% | |
| AAAATGGACGGATGGATGGT+TGG | + | tig0028915:50402-50421 | Msa1439910:intron | 45.0% | |
| CTTGGCAGTCAAGGCTTAAA+AGG | + | tig0028915:50530-50549 | Msa1439910:CDS | 45.0% | |
| GGCAGCTGATCATACTTACA+GGG | - | tig0028915:50597-50616 | Msa1439910:intergenic | 45.0% | |
| AGGCAGCTGATCATACTTAC+AGG | - | tig0028915:50598-50617 | Msa1439910:intergenic | 45.0% | |
| ACCTCACCTGCATTTACTTG+AGG | + | tig0028915:50888-50907 | Msa1439910:intron | 45.0% | |
| TCCTCAAGTAAATGCAGGTG+AGG | - | tig0028915:50892-50911 | Msa1439910:intergenic | 45.0% | |
| AGAACACTCCAGCAATTGCA+AGG | + | tig0028915:50918-50937 | Msa1439910:intron | 45.0% | |
| CTTGAGTTCGAATTCCTTGG+GGG | + | tig0028915:51073-51092 | Msa1439910:intron | 45.0% | |
| TTGAGTTCGAATTCCTTGGG+GGG | + | tig0028915:51074-51093 | Msa1439910:intron | 45.0% | |
| GGTGAAATACCATCAGGACT+GGG | + | tig0028915:51095-51114 | Msa1439910:intron | 45.0% | |
| ! | GATTTTTGACCCAGTCCTGA+TGG | - | tig0028915:51107-51126 | Msa1439910:intergenic | 45.0% |
| CAAACTGTCAGGTATAGAGC+CGG | - | tig0028915:51634-51653 | Msa1439910:intergenic | 45.0% | |
| GTTGAAGATGCCAAACTGTC+AGG | - | tig0028915:51645-51664 | Msa1439910:intergenic | 45.0% | |
| ! | TACGGTAAAAGAAAAGCGCG+CGG | - | tig0028915:51768-51787 | Msa1439910:intergenic | 45.0% |
| GCATAAAAGAGACACAGGTG+AGG | - | tig0028915:51976-51995 | Msa1439910:intergenic | 45.0% | |
| CTTTATTCTGTTGGCGTGCA+CGG | + | tig0028915:52080-52099 | Msa1439910:CDS | 45.0% | |
| AAAAGATGGGGTTGGAGTGG+AGG | - | tig0028915:48522-48541 | None:intergenic | 50.0% | |
| CTCGGTAGAGTAGTTACCAG+AGG | - | tig0028915:48546-48565 | Msa1439910:intergenic | 50.0% | |
| GCCGCAGTTAATGTGGTATG+AGG | - | tig0028915:48771-48790 | Msa1439910:intergenic | 50.0% | |
| CAGACCCCTTCAACACAACA+TGG | + | tig0028915:48807-48826 | Msa1439910:CDS | 50.0% | |
| GGAGAGCCATGTTGTGTTGA+AGG | - | tig0028915:48816-48835 | Msa1439910:intergenic | 50.0% | |
| !!! | GGAGAGTTTTTTCTGAGGGG+AGG | - | tig0028915:48895-48914 | Msa1439910:intergenic | 50.0% |
| !!! | GTTTTTTTTGCCGGAGGAGG+AGG | - | tig0028915:48929-48948 | Msa1439910:intergenic | 50.0% |
| !!! | GCAGTTTTTTTTGCCGGAGG+AGG | - | tig0028915:48932-48951 | Msa1439910:intergenic | 50.0% |
| GTAGCGAGAAGAAGGAAGAG+GGG | - | tig0028915:48963-48982 | Msa1439910:intergenic | 50.0% | |
| GGTAGCGAGAAGAAGGAAGA+GGG | - | tig0028915:48964-48983 | Msa1439910:intergenic | 50.0% | |
| AGGTAGCGAGAAGAAGGAAG+AGG | - | tig0028915:48965-48984 | Msa1439910:intergenic | 50.0% | |
| GTAGTTGTCGTAGACGGTGA+AGG | - | tig0028915:48996-49015 | Msa1439910:intergenic | 50.0% | |
| TGCGTCGTAGTTGTCGTAGA+CGG | - | tig0028915:49002-49021 | Msa1439910:intergenic | 50.0% | |
| GTAGAAGCAAAGATCAGCGG+CGG | - | tig0028915:49155-49174 | Msa1439910:intergenic | 50.0% | |
| GCCGCTGATCTTTGCTTCTA+CGG | + | tig0028915:49154-49173 | Msa1439910:CDS | 50.0% | |
| GCCGTAGAAGCAAAGATCAG+CGG | - | tig0028915:49158-49177 | Msa1439910:intergenic | 50.0% | |
| CTGATAAATTCGGCCGGTCA+TGG | + | tig0028915:49338-49357 | Msa1439910:CDS | 50.0% | |
| !! | TCGGTTCGGAATGCTTCATC+CGG | - | tig0028915:49367-49386 | Msa1439910:intergenic | 50.0% |
| ! | TGAAGCATTCCGAACCGAAC+CGG | + | tig0028915:49369-49388 | Msa1439910:CDS | 50.0% |
| TATGGTGTGGCTGCATTTCG+CGG | + | tig0028915:49543-49562 | Msa1439910:CDS | 50.0% | |
| TGTCTAGTGCCTGACATGTG+TGG | + | tig0028915:49867-49886 | Msa1439910:intron | 50.0% | |
| TCCACTGATCCACACATGTC+AGG | - | tig0028915:49879-49898 | Msa1439910:intergenic | 50.0% | |
| ! | AAGGAATCGCTTCGAGTTCC+AGG | + | tig0028915:49989-50008 | Msa1439910:CDS | 50.0% |
| ! | GCTTCGAGTTCCAGGTAGAA+TGG | + | tig0028915:49997-50016 | Msa1439910:CDS | 50.0% |
| GAGTTCCAGGTAGAATGGGA+TGG | + | tig0028915:50002-50021 | Msa1439910:CDS | 50.0% | |
| CCATTCCATCCCATTCTACC+TGG | - | tig0028915:50010-50029 | Msa1439910:intergenic | 50.0% | |
| CCAGGTAGAATGGGATGGAA+TGG | + | tig0028915:50007-50026 | Msa1439910:CDS | 50.0% | |
| ATCCCTGTGCTCCTACAACT+TGG | + | tig0028915:50032-50051 | Msa1439910:CDS | 50.0% | |
| TCCCTGTGCTCCTACAACTT+GGG | + | tig0028915:50033-50052 | Msa1439910:CDS | 50.0% | |
| ! | TCCCAAGTTGTAGGAGCACA+GGG | - | tig0028915:50037-50056 | Msa1439910:intergenic | 50.0% |
| ! | ATCCCAAGTTGTAGGAGCAC+AGG | - | tig0028915:50038-50057 | Msa1439910:intergenic | 50.0% |
| CTCCTACAACTTGGGATGCT+TGG | + | tig0028915:50041-50060 | Msa1439910:CDS | 50.0% | |
| TCCCAAGCATCCCAAGTTGT+AGG | - | tig0028915:50046-50065 | Msa1439910:intergenic | 50.0% | |
| ACAACTTGGGATGCTTGGGA+AGG | + | tig0028915:50046-50065 | Msa1439910:CDS | 50.0% | |
| TGATGGTATTTCACCCCCCA+AGG | - | tig0028915:51090-51109 | Msa1439910:intergenic | 50.0% | |
| TTGGGGGGTGAAATACCATC+AGG | + | tig0028915:51089-51108 | Msa1439910:intron | 50.0% | |
| GGGTGAAATACCATCAGGAC+TGG | + | tig0028915:51094-51113 | Msa1439910:intron | 50.0% | |
| CGGCTCTATACCTGACAGTT+TGG | + | tig0028915:51632-51651 | Msa1439910:CDS | 50.0% | |
| GTCTCTGCCAGGCTATTGAA+TGG | + | tig0028915:52026-52045 | Msa1439910:intron | 50.0% | |
| GGGAAAAGATGGGGTTGGAG+TGG | - | tig0028915:48525-48544 | None:intergenic | 55.0% | |
| CCAGAGGGAAAAGATGGGGT+TGG | - | tig0028915:48530-48549 | None:intergenic | 55.0% | |
| ! | CCAACCCCATCTTTTCCCTC+TGG | + | tig0028915:48527-48546 | Msa1439910:CDS | 55.0% |
| CTCTCCGACCGTTACTACAC+CGG | + | tig0028915:48830-48849 | Msa1439910:CDS | 55.0% | |
| GAGGAGGAGGAAGGAAGAAG+CGG | - | tig0028915:48916-48935 | Msa1439910:intergenic | 55.0% | |
| CTTCTTCCTTCCTCCTCCTC+CGG | + | tig0028915:48916-48935 | Msa1439910:CDS | 55.0% | |
| ! | TTTTTGCCGGAGGAGGAGGA+AGG | - | tig0028915:48925-48944 | Msa1439910:intergenic | 55.0% |
| TGTCGTAGACGGTGAAGGTG+CGG | - | tig0028915:48991-49010 | Msa1439910:intergenic | 55.0% | |
| AGTGCAACGTCGAAGGAAGG+AGG | - | tig0028915:49034-49053 | Msa1439910:intergenic | 55.0% | |
| ! | GAGAGTGCAACGTCGAAGGA+AGG | - | tig0028915:49037-49056 | Msa1439910:intergenic | 55.0% |
| AAGCAAAGATCAGCGGCGGA+GGG | - | tig0028915:49151-49170 | Msa1439910:intergenic | 55.0% | |
| TTACCAAACGGCGGTGACGA+CGG | + | tig0028915:49471-49490 | Msa1439910:CDS | 55.0% | |
| CCTTGAAGAGGGTGAGTGGA+AGG | - | tig0028915:49801-49820 | Msa1439910:intergenic | 55.0% | |
| CCTTCCACTCACCCTCTTCA+AGG | + | tig0028915:49798-49817 | Msa1439910:CDS | 55.0% | |
| GCCTGACATGTGTGGATCAG+TGG | + | tig0028915:49875-49894 | Msa1439910:intron | 55.0% | |
| AGTGAGACAACGCCAGATCC+AGG | - | tig0028915:51885-51904 | Msa1439910:intergenic | 55.0% | |
| GTGAGGCTGCACTAAAGGTC+GGG | - | tig0028915:51959-51978 | Msa1439910:intergenic | 55.0% | |
| GGTGAGGCTGCACTAAAGGT+CGG | - | tig0028915:51960-51979 | Msa1439910:intergenic | 55.0% | |
| CACAGGTGAGGCTGCACTAA+AGG | - | tig0028915:51964-51983 | Msa1439910:intergenic | 55.0% | |
| TATTCTGTTGGCGTGCACGG+TGG | + | tig0028915:52083-52102 | Msa1439910:CDS | 55.0% | |
| AGTGGAGGTGGAGGTGGAGA+TGG | - | tig0028915:48507-48526 | None:intergenic | 60.0% | |
| AGATGGGGTTGGAGTGGAGG+TGG | - | tig0028915:48519-48538 | None:intergenic | 60.0% | |
| TCCGACCGTTACTACACCGG+CGG | + | tig0028915:48833-48852 | Msa1439910:CDS | 60.0% | |
| GAAACGGAGTGGCTCCGAGA+CGG | - | tig0028915:48870-48889 | Msa1439910:intergenic | 60.0% | |
| GAGGGGAGGTTGAAACGGAG+TGG | - | tig0028915:48881-48900 | Msa1439910:intergenic | 60.0% | |
| CGGAGGAGGTAGCGAGAAGA+AGG | - | tig0028915:48971-48990 | Msa1439910:intergenic | 60.0% | |
| ! | GGAGGAGAGTGCAACGTCGA+AGG | - | tig0028915:49041-49060 | Msa1439910:intergenic | 60.0% |
| GAAGCAAAGATCAGCGGCGG+AGG | - | tig0028915:49152-49171 | Msa1439910:intergenic | 60.0% | |
| GGTAGAGTTTCGTGCGGCTC+CGG | + | tig0028915:49283-49302 | Msa1439910:CDS | 60.0% | |
| GTGCGGCTCCGGTGATCATT+GGG | + | tig0028915:49294-49313 | Msa1439910:CDS | 60.0% | |
| TGCGGCTCCGGTGATCATTG+GGG | + | tig0028915:49295-49314 | Msa1439910:CDS | 60.0% | |
| CTTCATCCGGCTGCCATGAC+CGG | - | tig0028915:49354-49373 | Msa1439910:intergenic | 60.0% | |
| CTGGCACTCGTCCTTCCAGT+AGG | - | tig0028915:52055-52074 | Msa1439910:intergenic | 60.0% | |
| ! | GGTGGAGGTGGAGATGGTGG+TGG | - | tig0028915:48501-48520 | None:intergenic | 65.0% |
| GGAGGTGGAGGTGGAGATGG+TGG | - | tig0028915:48504-48523 | None:intergenic | 65.0% | |
| GGTTGGAGTGGAGGTGGAGG+TGG | - | tig0028915:48513-48532 | None:intergenic | 65.0% | |
| TGGGGTTGGAGTGGAGGTGG+AGG | - | tig0028915:48516-48535 | None:intergenic | 65.0% | |
| GCCGCCGGTGTAGTAACGGT+CGG | - | tig0028915:48837-48856 | Msa1439910:intergenic | 65.0% | |
| TGGCGCCGCCGGTGTAGTAA+CGG | - | tig0028915:48841-48860 | Msa1439910:intergenic | 65.0% | |
| ! | AGACGGTGAAGGTGCGGAGG+AGG | - | tig0028915:48985-49004 | Msa1439910:intergenic | 65.0% |
| ! | CGTAGACGGTGAAGGTGCGG+AGG | - | tig0028915:48988-49007 | Msa1439910:intergenic | 65.0% |
| ! | CGTGCGGTGGATTCAGGCCA+TGG | - | tig0028915:49088-49107 | Msa1439910:intergenic | 65.0% |
| CCTGAATCCACCGCACGCGA+CGG | + | tig0028915:49091-49110 | Msa1439910:CDS | 65.0% | |
| ! | AGCATAAGCGCCGTCGCGTG+CGG | - | tig0028915:49104-49123 | Msa1439910:intergenic | 65.0% |
| CGTGCGGCTCCGGTGATCAT+TGG | + | tig0028915:49293-49312 | Msa1439910:CDS | 65.0% | |
| TCCGGTGATCATTGGGGCGC+CGG | + | tig0028915:49301-49320 | Msa1439910:CDS | 65.0% | |
| ATTCGGCCGGTCATGGCAGC+CGG | + | tig0028915:49345-49364 | Msa1439910:CDS | 65.0% | |
| GACGACGGAGGAGGAGACGT+TGG | + | tig0028915:49486-49505 | Msa1439910:CDS | 65.0% | |
| ! | TGGCTCCGAGACGGTGGTGG+TGG | - | tig0028915:48861-48880 | Msa1439910:intergenic | 70.0% |
| GAGTGGCTCCGAGACGGTGG+TGG | - | tig0028915:48864-48883 | Msa1439910:intergenic | 70.0% | |
| ACGGAGTGGCTCCGAGACGG+TGG | - | tig0028915:48867-48886 | Msa1439910:intergenic | 70.0% | |
| ! | CCGTCGCGTGCGGTGGATTC+AGG | - | tig0028915:49094-49113 | Msa1439910:intergenic | 70.0% |
| ! | ATAAGCGCCGTCGCGTGCGG+TGG | - | tig0028915:49101-49120 | Msa1439910:intergenic | 70.0% |
| GCCGGCGCCCCAATGATCAC+CGG | - | tig0028915:49305-49324 | Msa1439910:intergenic | 70.0% | |
| CCTCCGTCGTCACCGCCGTT+TGG | - | tig0028915:49477-49496 | Msa1439910:intergenic | 70.0% | |
| CCAAACGGCGGTGACGACGG+AGG | + | tig0028915:49474-49493 | Msa1439910:CDS | 70.0% | |
| AACGGCGGTGACGACGGAGG+AGG | + | tig0028915:49477-49496 | Msa1439910:CDS | 70.0% | |
| CGGCGCCACCACCACCGTCT+CGG | + | tig0028915:48853-48872 | Msa1439910:CDS | 75.0% | |
| !!! | GACGGTGGTGGTGGCGCCGC+CGG | - | tig0028915:48852-48871 | Msa1439910:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028915 | gene | 48351 | 52112 | 48351 | ID=Msa1439910;Name=Msa1439910 |
| tig0028915 | mRNA | 48351 | 52112 | 48351 | ID=Msa1439910-mRNA-1;Parent=Msa1439910;Name=Msa1439910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=101|0.5|0.28|1|1|1|7|0|483 |
| tig0028915 | exon | 48351 | 48548 | 48351 | ID=Msa1439910-mRNA-1:exon:11987;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 48759 | 49579 | 48759 | ID=Msa1439910-mRNA-1:exon:11988;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 49657 | 49819 | 49657 | ID=Msa1439910-mRNA-1:exon:11989;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 49969 | 50119 | 49969 | ID=Msa1439910-mRNA-1:exon:11990;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 50526 | 50597 | 50526 | ID=Msa1439910-mRNA-1:exon:11991;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 51608 | 51676 | 51608 | ID=Msa1439910-mRNA-1:exon:11992;Parent=Msa1439910-mRNA-1 |
| tig0028915 | exon | 52037 | 52112 | 52037 | ID=Msa1439910-mRNA-1:exon:11993;Parent=Msa1439910-mRNA-1 |
| tig0028915 | five_prime_UTR | 48351 | 48451 | 48351 | ID=Msa1439910-mRNA-1:five_prime_utr;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 48452 | 48548 | 48452 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 48759 | 49579 | 48759 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 49657 | 49819 | 49657 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 49969 | 50119 | 49969 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 50526 | 50597 | 50526 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 51608 | 51676 | 51608 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| tig0028915 | CDS | 52037 | 52112 | 52037 | ID=Msa1439910-mRNA-1:cds;Parent=Msa1439910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
