Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425500 | XP_013469415.1 | 98.179 | 604 | 11 | 0 | 15 | 618 | 33 | 636 | 0.0 | 1232 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425500 | sp|F4HWL3|RLP4_ARATH | 32.897 | 611 | 358 | 20 | 19 | 608 | 28 | 607 | 2.50e-93 | 303 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425500 | A0A072VPY1 | 98.179 | 604 | 11 | 0 | 15 | 618 | 33 | 636 | 0.0 | 1232 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013270 | Msa1425500 | 0.806439 | 8.221278e-50 | -8.615850e-47 |
Msa0036730 | Msa1425500 | 0.909298 | 6.644338e-82 | -8.615850e-47 |
Msa0044780 | Msa1425500 | -0.804639 | 1.961054e-49 | -8.615850e-47 |
Msa0046200 | Msa1425500 | 0.807037 | 6.146302e-50 | -8.615850e-47 |
Msa0091090 | Msa1425500 | -0.803517 | 3.356693e-49 | -8.615850e-47 |
Msa0106540 | Msa1425500 | 0.822810 | 1.940906e-53 | -8.615850e-47 |
Msa1405830 | Msa1425500 | 0.818995 | 1.465281e-52 | -8.615850e-47 |
Msa1425500 | Msa1437980 | 0.915631 | 4.680407e-85 | -8.615850e-47 |
Msa1425500 | Msa1439910 | 0.806739 | 7.107325e-50 | -8.615850e-47 |
Msa0773960 | Msa1425500 | 0.825550 | 4.409105e-54 | -8.615850e-47 |
Msa0183200 | Msa1425500 | -0.804442 | 2.156403e-49 | -8.615850e-47 |
Msa1263120 | Msa1425500 | 0.802667 | 5.031970e-49 | -8.615850e-47 |
Msa0371510 | Msa1425500 | 0.805016 | 1.636131e-49 | -8.615850e-47 |
Msa0379480 | Msa1425500 | 0.814834 | 1.259273e-51 | -8.615850e-47 |
Msa0419730 | Msa1425500 | 0.802124 | 6.509807e-49 | -8.615850e-47 |
Msa0419860 | Msa1425500 | 0.801852 | 7.404218e-49 | -8.615850e-47 |
Msa0450030 | Msa1425500 | 0.807230 | 5.594505e-50 | -8.615850e-47 |
Msa0467170 | Msa1425500 | 0.810098 | 1.364712e-50 | -8.615850e-47 |
Msa0467330 | Msa1425500 | 0.811803 | 5.831355e-51 | -8.615850e-47 |
Msa0481670 | Msa1425500 | 0.821297 | 4.351576e-53 | -8.615850e-47 |
Msa1090280 | Msa1425500 | 0.931393 | 4.037810e-94 | -8.615850e-47 |
Msa0567570 | Msa1425500 | 0.803967 | 2.707492e-49 | -8.615850e-47 |
Msa0576320 | Msa1425500 | 0.803224 | 3.861034e-49 | -8.615850e-47 |
Msa0931020 | Msa1425500 | 0.932021 | 1.588671e-94 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425500 | MtrunA17_Chr1g0198681 | 98.179 | 604 | 11 | 0 | 15 | 618 | 33 | 636 | 0.0 | 1232 |
Msa1425500 | MtrunA17_Chr5g0422481 | 71.005 | 607 | 163 | 5 | 19 | 614 | 36 | 640 | 0.0 | 878 |
Msa1425500 | MtrunA17_Chr2g0282601 | 34.310 | 580 | 349 | 18 | 3 | 572 | 19 | 576 | 7.16e-91 | 293 |
Msa1425500 | MtrunA17_Chr8g0341151 | 28.571 | 476 | 295 | 23 | 22 | 481 | 27 | 473 | 2.77e-37 | 148 |
Msa1425500 | MtrunA17_Chr7g0236881 | 29.872 | 549 | 294 | 27 | 22 | 531 | 30 | 526 | 4.80e-36 | 144 |
Msa1425500 | MtrunA17_Chr1g0205741 | 27.833 | 503 | 315 | 20 | 20 | 509 | 26 | 493 | 2.12e-34 | 137 |
Msa1425500 | MtrunA17_Chr7g0263591 | 27.907 | 516 | 319 | 19 | 11 | 506 | 28 | 510 | 1.38e-32 | 134 |
Msa1425500 | MtrunA17_Chr8g0340881 | 27.650 | 434 | 260 | 18 | 66 | 481 | 85 | 482 | 1.66e-32 | 134 |
Msa1425500 | MtrunA17_Chr8g0340941 | 27.332 | 461 | 282 | 18 | 38 | 481 | 49 | 473 | 2.03e-31 | 128 |
Msa1425500 | MtrunA17_Chr8g0340871 | 26.923 | 442 | 271 | 17 | 60 | 481 | 74 | 483 | 2.63e-31 | 130 |
Msa1425500 | MtrunA17_Chr8g0347661 | 26.271 | 472 | 313 | 16 | 22 | 481 | 37 | 485 | 5.03e-31 | 129 |
Msa1425500 | MtrunA17_Chr8g0340931 | 26.539 | 471 | 310 | 16 | 22 | 481 | 33 | 478 | 1.76e-30 | 127 |
Msa1425500 | MtrunA17_Chr6g0487571 | 28.016 | 489 | 284 | 22 | 22 | 481 | 32 | 481 | 2.00e-30 | 127 |
Msa1425500 | MtrunA17_Chr8g0341231 | 27.294 | 436 | 277 | 17 | 60 | 481 | 94 | 503 | 2.37e-30 | 125 |
Msa1425500 | MtrunA17_Chr1g0181731 | 25.434 | 519 | 340 | 18 | 22 | 522 | 30 | 519 | 1.39e-29 | 124 |
Msa1425500 | MtrunA17_Chr8g0341011 | 26.790 | 433 | 272 | 16 | 63 | 481 | 78 | 479 | 4.98e-28 | 120 |
Msa1425500 | MtrunA17_Chr8g0340891 | 26.807 | 429 | 265 | 18 | 66 | 481 | 85 | 477 | 7.98e-28 | 119 |
Msa1425500 | MtrunA17_Chr8g0341061 | 28.633 | 461 | 258 | 23 | 65 | 488 | 112 | 538 | 1.32e-27 | 118 |
Msa1425500 | MtrunA17_Chr8g0340911 | 25.577 | 477 | 297 | 21 | 22 | 478 | 37 | 475 | 1.94e-25 | 112 |
Msa1425500 | MtrunA17_Chr2g0330591 | 26.923 | 494 | 296 | 24 | 22 | 488 | 32 | 487 | 2.85e-25 | 111 |
Msa1425500 | MtrunA17_Chr3g0123141 | 26.620 | 571 | 357 | 28 | 22 | 570 | 28 | 558 | 3.95e-25 | 110 |
Msa1425500 | MtrunA17_Chr5g0411631 | 28.831 | 496 | 286 | 23 | 9 | 483 | 27 | 476 | 1.28e-23 | 106 |
Msa1425500 | MtrunA17_Chr8g0341141 | 25.870 | 460 | 291 | 21 | 22 | 462 | 32 | 460 | 2.99e-23 | 103 |
Msa1425500 | MtrunA17_Chr8g0341091 | 26.168 | 535 | 295 | 26 | 65 | 534 | 108 | 607 | 3.12e-22 | 101 |
Msa1425500 | MtrunA17_Chr8g0341101 | 24.742 | 582 | 349 | 28 | 22 | 571 | 62 | 586 | 8.44e-22 | 100 |
Msa1425500 | MtrunA17_Chr6g0479311 | 26.255 | 518 | 318 | 25 | 22 | 521 | 29 | 500 | 3.13e-20 | 94.4 |
Msa1425500 | MtrunA17_Chr4g0044941 | 28.159 | 277 | 174 | 11 | 210 | 480 | 14 | 271 | 1.33e-16 | 80.5 |
Msa1425500 | MtrunA17_Chr6g0456231 | 35.088 | 171 | 98 | 6 | 362 | 528 | 28 | 189 | 3.15e-15 | 79.0 |
Msa1425500 | MtrunA17_Chr8g0358831 | 37.226 | 137 | 80 | 5 | 347 | 481 | 313 | 445 | 4.10e-15 | 79.0 |
Msa1425500 | MtrunA17_Chr5g0439511 | 40.580 | 138 | 70 | 5 | 400 | 532 | 103 | 233 | 4.28e-15 | 76.6 |
Msa1425500 | MtrunA17_Chr7g0221711 | 35.233 | 193 | 114 | 7 | 341 | 527 | 4 | 191 | 4.78e-15 | 79.0 |
Msa1425500 | MtrunA17_Chr3g0123891 | 29.707 | 239 | 141 | 8 | 367 | 582 | 28 | 262 | 1.09e-14 | 77.4 |
Msa1425500 | MtrunA17_Chr5g0439461 | 39.855 | 138 | 71 | 5 | 400 | 532 | 895 | 1025 | 1.71e-14 | 77.4 |
Msa1425500 | MtrunA17_Chr2g0323941 | 33.838 | 198 | 106 | 8 | 326 | 519 | 10 | 186 | 2.79e-14 | 76.3 |
Msa1425500 | MtrunA17_Chr8g0382101 | 32.018 | 228 | 126 | 8 | 368 | 570 | 22 | 245 | 5.05e-14 | 75.1 |
Msa1425500 | MtrunA17_Chr5g0440621 | 35.443 | 158 | 88 | 7 | 371 | 524 | 31 | 178 | 5.55e-14 | 71.6 |
Msa1425500 | MtrunA17_Chr4g0022431 | 36.250 | 160 | 86 | 6 | 364 | 519 | 31 | 178 | 9.39e-14 | 74.7 |
Msa1425500 | MtrunA17_Chr1g0169661 | 37.762 | 143 | 77 | 5 | 395 | 532 | 136 | 271 | 1.65e-13 | 72.4 |
Msa1425500 | MtrunA17_Chr6g0464171 | 30.481 | 187 | 94 | 6 | 419 | 573 | 506 | 688 | 3.56e-13 | 73.2 |
Msa1425500 | MtrunA17_Chr1g0207531 | 33.962 | 159 | 91 | 7 | 370 | 524 | 32 | 180 | 6.95e-13 | 68.2 |
Msa1425500 | MtrunA17_Chr1g0201241 | 42.975 | 121 | 56 | 5 | 387 | 503 | 48 | 159 | 9.40e-13 | 71.6 |
Msa1425500 | MtrunA17_Chr1g0201241 | 35.385 | 130 | 75 | 3 | 387 | 507 | 58 | 187 | 8.70e-11 | 65.5 |
Msa1425500 | MtrunA17_Chr7g0219371 | 40.984 | 122 | 64 | 4 | 414 | 531 | 732 | 849 | 1.04e-12 | 71.6 |
Msa1425500 | MtrunA17_Chr1g0174251 | 36.567 | 134 | 77 | 3 | 387 | 519 | 50 | 176 | 1.19e-12 | 70.9 |
Msa1425500 | MtrunA17_Chr6g0469721 | 37.190 | 121 | 67 | 4 | 415 | 531 | 16 | 131 | 1.36e-12 | 67.0 |
Msa1425500 | MtrunA17_Chr2g0300201 | 29.947 | 187 | 95 | 6 | 419 | 573 | 506 | 688 | 1.58e-12 | 70.9 |
Msa1425500 | MtrunA17_Chr8g0345471 | 37.692 | 130 | 68 | 5 | 364 | 492 | 27 | 144 | 1.60e-12 | 70.5 |
Msa1425500 | MtrunA17_Chr6g0455871 | 39.516 | 124 | 61 | 5 | 416 | 532 | 1 | 117 | 2.08e-12 | 66.6 |
Msa1425500 | MtrunA17_Chr3g0106171 | 40.000 | 125 | 63 | 4 | 414 | 532 | 805 | 923 | 2.10e-12 | 70.5 |
Msa1425500 | MtrunA17_Chr5g0423871 | 36.154 | 130 | 74 | 5 | 363 | 488 | 41 | 165 | 3.35e-12 | 65.9 |
Msa1425500 | MtrunA17_Chr5g0411301 | 39.416 | 137 | 71 | 5 | 400 | 531 | 319 | 448 | 3.38e-12 | 69.3 |
Msa1425500 | MtrunA17_Chr2g0304271 | 35.537 | 121 | 72 | 4 | 415 | 531 | 58 | 176 | 3.72e-12 | 67.0 |
Msa1425500 | MtrunA17_Chr5g0436841 | 41.228 | 114 | 64 | 3 | 416 | 527 | 196 | 308 | 4.20e-12 | 69.7 |
Msa1425500 | MtrunA17_Chr4g0022051 | 39.568 | 139 | 70 | 6 | 400 | 532 | 138 | 268 | 4.22e-12 | 67.8 |
Msa1425500 | MtrunA17_Chr5g0439451 | 40.602 | 133 | 68 | 5 | 406 | 532 | 908 | 1035 | 4.40e-12 | 69.7 |
Msa1425500 | MtrunA17_Chr6g0464211 | 38.182 | 110 | 62 | 3 | 400 | 507 | 74 | 179 | 5.08e-12 | 69.3 |
Msa1425500 | MtrunA17_Chr6g0464211 | 31.928 | 166 | 101 | 6 | 416 | 573 | 526 | 687 | 8.89e-12 | 68.6 |
Msa1425500 | MtrunA17_Chr2g0304481 | 34.392 | 189 | 103 | 6 | 416 | 589 | 851 | 1033 | 6.10e-12 | 68.9 |
Msa1425500 | MtrunA17_Chr5g0419961 | 37.405 | 131 | 72 | 4 | 406 | 531 | 449 | 574 | 7.53e-12 | 68.6 |
Msa1425500 | MtrunA17_Chr6g0455861 | 39.024 | 123 | 65 | 4 | 415 | 532 | 308 | 425 | 7.98e-12 | 68.2 |
Msa1425500 | MtrunA17_Chr2g0314841 | 32.927 | 164 | 94 | 5 | 355 | 504 | 16 | 177 | 9.70e-12 | 68.6 |
Msa1425500 | MtrunA17_Chr1g0204461 | 30.000 | 170 | 110 | 5 | 370 | 537 | 43 | 205 | 1.08e-11 | 68.2 |
Msa1425500 | MtrunA17_Chr6g0463301 | 39.669 | 121 | 65 | 4 | 416 | 532 | 919 | 1035 | 1.21e-11 | 68.2 |
Msa1425500 | MtrunA17_Chr1g0202011 | 36.691 | 139 | 74 | 6 | 400 | 532 | 2 | 132 | 1.24e-11 | 64.3 |
Msa1425500 | MtrunA17_Chr7g0257621 | 33.533 | 167 | 99 | 6 | 416 | 573 | 400 | 563 | 1.26e-11 | 67.8 |
Msa1425500 | MtrunA17_Chr7g0245221 | 37.241 | 145 | 81 | 6 | 364 | 502 | 27 | 167 | 1.41e-11 | 67.8 |
Msa1425500 | MtrunA17_Chr6g0463281 | 38.843 | 121 | 66 | 4 | 416 | 532 | 940 | 1056 | 1.47e-11 | 67.8 |
Msa1425500 | MtrunA17_Chr8g0337671 | 30.000 | 190 | 103 | 6 | 369 | 531 | 34 | 220 | 1.48e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr6g0463291 | 40.496 | 121 | 62 | 4 | 416 | 531 | 539 | 654 | 1.64e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr2g0278861 | 32.973 | 185 | 110 | 7 | 371 | 550 | 32 | 207 | 1.68e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr6g0455801 | 37.681 | 138 | 76 | 5 | 399 | 532 | 728 | 859 | 1.71e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr2g0278831 | 33.508 | 191 | 112 | 7 | 348 | 534 | 15 | 194 | 1.72e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr5g0419221 | 33.333 | 165 | 98 | 5 | 416 | 572 | 526 | 686 | 1.72e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr5g0420291 | 41.803 | 122 | 63 | 4 | 414 | 531 | 47 | 164 | 1.93e-11 | 64.3 |
Msa1425500 | MtrunA17_Chr1g0200911 | 33.140 | 172 | 102 | 7 | 367 | 534 | 30 | 192 | 2.01e-11 | 67.0 |
Msa1425500 | MtrunA17_Chr2g0284101 | 29.921 | 254 | 128 | 11 | 368 | 580 | 39 | 283 | 2.03e-11 | 67.0 |
Msa1425500 | MtrunA17_Chr6g0463251 | 39.024 | 123 | 67 | 4 | 414 | 532 | 898 | 1016 | 2.07e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr6g0455851 | 39.167 | 120 | 69 | 3 | 415 | 532 | 819 | 936 | 2.18e-11 | 67.4 |
Msa1425500 | MtrunA17_Chr4g0000081 | 38.136 | 118 | 58 | 5 | 369 | 482 | 30 | 136 | 2.27e-11 | 67.0 |
Msa1425500 | MtrunA17_Chr0c09g0493541 | 41.346 | 104 | 54 | 3 | 400 | 500 | 70 | 169 | 2.30e-11 | 64.7 |
Msa1425500 | MtrunA17_Chr5g0437741 | 38.406 | 138 | 74 | 5 | 371 | 504 | 78 | 208 | 2.53e-11 | 67.0 |
Msa1425500 | MtrunA17_Chr4g0007291 | 39.167 | 120 | 63 | 4 | 417 | 531 | 562 | 676 | 2.82e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr2g0284851 | 41.026 | 117 | 61 | 4 | 419 | 531 | 65 | 177 | 2.85e-11 | 64.3 |
Msa1425500 | MtrunA17_Chr2g0315081 | 35.333 | 150 | 86 | 7 | 363 | 504 | 27 | 173 | 2.94e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr2g0314821 | 31.481 | 162 | 99 | 5 | 355 | 504 | 16 | 177 | 2.94e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr1g0189871 | 35.443 | 158 | 95 | 6 | 416 | 569 | 602 | 756 | 3.23e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr7g0250491 | 33.529 | 170 | 96 | 6 | 415 | 572 | 587 | 751 | 3.38e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr8g0363221 | 33.918 | 171 | 103 | 5 | 416 | 578 | 391 | 559 | 3.48e-11 | 66.6 |
Msa1425500 | MtrunA17_Chr5g0418721 | 34.161 | 161 | 81 | 5 | 369 | 504 | 32 | 192 | 3.75e-11 | 65.1 |
Msa1425500 | MtrunA17_Chr1g0203251 | 33.125 | 160 | 98 | 5 | 391 | 543 | 932 | 1089 | 4.15e-11 | 66.2 |
Msa1425500 | MtrunA17_Chr5g0408611 | 40.909 | 110 | 59 | 3 | 400 | 507 | 62 | 167 | 4.36e-11 | 66.2 |
Msa1425500 | MtrunA17_Chr4g0007211 | 37.405 | 131 | 72 | 4 | 406 | 531 | 902 | 1027 | 4.70e-11 | 66.2 |
Msa1425500 | MtrunA17_Chr5g0408801 | 34.940 | 166 | 96 | 6 | 416 | 573 | 527 | 688 | 4.87e-11 | 66.2 |
Msa1425500 | MtrunA17_Chr5g0429421 | 39.855 | 138 | 71 | 6 | 400 | 532 | 701 | 831 | 5.23e-11 | 65.9 |
Msa1425500 | MtrunA17_Chr7g0250471 | 31.285 | 179 | 97 | 7 | 416 | 570 | 553 | 729 | 5.98e-11 | 65.9 |
Msa1425500 | MtrunA17_Chr4g0049181 | 28.095 | 210 | 123 | 8 | 369 | 554 | 52 | 257 | 6.29e-11 | 65.5 |
Msa1425500 | MtrunA17_Chr6g0455751 | 36.691 | 139 | 76 | 5 | 399 | 532 | 541 | 672 | 6.47e-11 | 65.5 |
Msa1425500 | MtrunA17_Chr5g0423881 | 24.161 | 298 | 190 | 14 | 22 | 304 | 66 | 342 | 6.56e-11 | 64.7 |
Msa1425500 | MtrunA17_Chr1g0151041 | 29.167 | 168 | 108 | 5 | 372 | 537 | 1 | 159 | 6.85e-11 | 65.5 |
Msa1425500 | MtrunA17_Chr6g0487561 | 25.155 | 322 | 208 | 16 | 22 | 330 | 41 | 342 | 8.45e-11 | 64.3 |
Msa1425500 | MtrunA17_Chr6g0487061 | 32.500 | 160 | 96 | 4 | 421 | 571 | 513 | 669 | 9.44e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425500 | AT1G25570.1 | 62.437 | 599 | 218 | 7 | 18 | 613 | 28 | 622 | 0.0 | 757 |
Msa1425500 | AT1G28340.1 | 32.897 | 611 | 358 | 20 | 19 | 608 | 28 | 607 | 2.54e-94 | 303 |
Msa1425500 | AT3G46400.1 | 26.460 | 582 | 350 | 23 | 6 | 570 | 15 | 535 | 1.80e-36 | 146 |
Msa1425500 | AT2G14440.1 | 26.667 | 615 | 350 | 28 | 10 | 598 | 23 | 562 | 1.04e-35 | 144 |
Msa1425500 | AT1G51910.1 | 29.598 | 473 | 288 | 20 | 35 | 490 | 49 | 493 | 1.35e-34 | 140 |
Msa1425500 | AT2G14510.1 | 26.904 | 617 | 324 | 31 | 22 | 598 | 32 | 561 | 3.84e-34 | 139 |
Msa1425500 | AT2G14510.2 | 26.904 | 617 | 324 | 31 | 22 | 598 | 40 | 569 | 4.26e-34 | 139 |
Msa1425500 | AT5G59670.2 | 27.559 | 508 | 313 | 23 | 22 | 508 | 31 | 504 | 4.73e-34 | 139 |
Msa1425500 | AT5G59670.1 | 27.559 | 508 | 313 | 23 | 22 | 508 | 31 | 504 | 4.73e-34 | 139 |
Msa1425500 | AT1G51880.1 | 28.571 | 511 | 308 | 24 | 1 | 490 | 18 | 492 | 8.10e-34 | 138 |
Msa1425500 | AT1G51880.2 | 28.655 | 513 | 305 | 25 | 1 | 490 | 36 | 510 | 8.93e-34 | 138 |
Msa1425500 | AT3G21340.2 | 26.518 | 494 | 308 | 20 | 22 | 494 | 36 | 495 | 1.24e-33 | 137 |
Msa1425500 | AT2G28990.2 | 28.081 | 495 | 300 | 25 | 22 | 494 | 28 | 488 | 1.82e-33 | 137 |
Msa1425500 | AT2G28990.1 | 28.081 | 495 | 300 | 25 | 22 | 494 | 28 | 488 | 1.82e-33 | 137 |
Msa1425500 | AT3G21340.1 | 26.518 | 494 | 308 | 20 | 22 | 494 | 36 | 495 | 1.92e-33 | 137 |
Msa1425500 | AT5G59680.1 | 28.474 | 439 | 275 | 15 | 65 | 494 | 82 | 490 | 2.02e-33 | 137 |
Msa1425500 | AT3G46340.1 | 29.412 | 442 | 252 | 19 | 60 | 481 | 80 | 481 | 3.32e-33 | 136 |
Msa1425500 | AT1G49100.1 | 29.120 | 443 | 271 | 17 | 65 | 494 | 82 | 494 | 8.97e-33 | 135 |
Msa1425500 | AT1G51880.3 | 28.215 | 521 | 305 | 25 | 1 | 490 | 36 | 518 | 1.26e-32 | 134 |
Msa1425500 | AT2G04300.2 | 27.579 | 504 | 318 | 24 | 11 | 495 | 22 | 497 | 5.52e-32 | 132 |
Msa1425500 | AT3G19230.1 | 28.862 | 492 | 319 | 20 | 20 | 504 | 23 | 490 | 1.53e-31 | 129 |
Msa1425500 | AT5G48740.1 | 29.317 | 498 | 264 | 24 | 22 | 480 | 24 | 472 | 6.04e-31 | 129 |
Msa1425500 | AT1G51790.3 | 26.289 | 582 | 335 | 26 | 22 | 574 | 32 | 548 | 1.34e-30 | 128 |
Msa1425500 | AT1G51790.1 | 26.289 | 582 | 335 | 26 | 22 | 574 | 32 | 548 | 1.34e-30 | 128 |
Msa1425500 | AT1G51850.2 | 25.553 | 497 | 304 | 20 | 22 | 494 | 29 | 483 | 1.78e-30 | 128 |
Msa1425500 | AT1G51790.2 | 27.459 | 488 | 287 | 21 | 22 | 481 | 32 | 480 | 3.93e-30 | 127 |
Msa1425500 | AT1G51870.2 | 27.022 | 507 | 287 | 23 | 22 | 490 | 32 | 493 | 4.05e-30 | 127 |
Msa1425500 | AT2G29000.1 | 27.570 | 428 | 265 | 18 | 66 | 481 | 80 | 474 | 8.32e-30 | 125 |
Msa1425500 | AT1G05700.1 | 28.482 | 481 | 286 | 21 | 22 | 481 | 34 | 477 | 1.07e-29 | 125 |
Msa1425500 | AT1G05700.2 | 28.482 | 481 | 286 | 21 | 22 | 481 | 34 | 477 | 1.25e-29 | 125 |
Msa1425500 | AT1G07550.1 | 26.891 | 476 | 303 | 22 | 22 | 481 | 32 | 478 | 1.94e-29 | 124 |
Msa1425500 | AT1G67720.1 | 26.653 | 499 | 328 | 19 | 22 | 504 | 29 | 505 | 2.03e-29 | 124 |
Msa1425500 | AT5G16900.2 | 26.471 | 442 | 263 | 16 | 66 | 481 | 77 | 482 | 4.90e-29 | 122 |
Msa1425500 | AT2G28960.2 | 27.400 | 427 | 269 | 16 | 64 | 481 | 82 | 476 | 5.17e-29 | 123 |
Msa1425500 | AT1G51800.1 | 25.090 | 558 | 333 | 27 | 35 | 571 | 48 | 541 | 5.85e-29 | 123 |
Msa1425500 | AT1G51890.3 | 26.943 | 579 | 314 | 29 | 22 | 571 | 28 | 526 | 6.37e-29 | 122 |
Msa1425500 | AT5G16900.1 | 26.471 | 442 | 263 | 16 | 66 | 481 | 77 | 482 | 6.88e-29 | 123 |
Msa1425500 | AT5G16900.3 | 26.471 | 442 | 263 | 16 | 66 | 481 | 77 | 482 | 6.88e-29 | 123 |
Msa1425500 | AT1G51890.2 | 26.943 | 579 | 314 | 29 | 22 | 571 | 28 | 526 | 8.09e-29 | 122 |
Msa1425500 | AT1G51890.1 | 26.943 | 579 | 314 | 29 | 22 | 571 | 28 | 526 | 8.32e-29 | 122 |
Msa1425500 | AT4G20450.1 | 27.333 | 450 | 293 | 17 | 64 | 496 | 84 | 516 | 9.41e-29 | 122 |
Msa1425500 | AT4G20450.2 | 27.333 | 450 | 293 | 17 | 64 | 496 | 84 | 516 | 9.41e-29 | 122 |
Msa1425500 | AT3G46370.2 | 27.711 | 415 | 264 | 16 | 77 | 481 | 2 | 390 | 1.32e-28 | 122 |
Msa1425500 | AT3G46370.1 | 27.711 | 415 | 264 | 16 | 77 | 481 | 2 | 390 | 1.32e-28 | 122 |
Msa1425500 | AT1G51850.1 | 25.352 | 497 | 285 | 20 | 22 | 494 | 29 | 463 | 1.35e-28 | 122 |
Msa1425500 | AT3G05990.1 | 28.291 | 509 | 297 | 27 | 22 | 504 | 30 | 496 | 1.95e-28 | 120 |
Msa1425500 | AT2G19190.1 | 26.742 | 445 | 252 | 19 | 66 | 481 | 83 | 482 | 2.10e-28 | 121 |
Msa1425500 | AT3G46330.1 | 26.862 | 443 | 287 | 18 | 59 | 492 | 77 | 491 | 2.30e-28 | 121 |
Msa1425500 | AT1G51860.1 | 27.615 | 478 | 292 | 21 | 35 | 490 | 49 | 494 | 2.93e-28 | 121 |
Msa1425500 | AT4G29990.2 | 26.360 | 478 | 304 | 22 | 22 | 481 | 30 | 477 | 2.95e-28 | 120 |
Msa1425500 | AT4G29990.1 | 26.360 | 478 | 304 | 22 | 22 | 481 | 30 | 477 | 4.01e-28 | 120 |
Msa1425500 | AT3G46420.1 | 26.027 | 511 | 307 | 21 | 1 | 481 | 9 | 478 | 6.99e-28 | 119 |
Msa1425500 | AT2G04300.1 | 26.253 | 499 | 290 | 21 | 11 | 495 | 22 | 456 | 8.71e-28 | 119 |
Msa1425500 | AT5G59650.1 | 27.252 | 444 | 273 | 17 | 66 | 494 | 83 | 491 | 5.06e-27 | 117 |
Msa1425500 | AT2G19210.1 | 27.016 | 496 | 307 | 21 | 22 | 494 | 34 | 497 | 7.64e-27 | 116 |
Msa1425500 | AT2G37050.4 | 25.882 | 510 | 316 | 19 | 22 | 504 | 31 | 505 | 9.16e-27 | 116 |
Msa1425500 | AT2G37050.2 | 25.882 | 510 | 316 | 19 | 22 | 504 | 31 | 505 | 1.06e-26 | 115 |
Msa1425500 | AT1G07560.1 | 27.397 | 438 | 278 | 17 | 66 | 492 | 83 | 491 | 1.10e-26 | 116 |
Msa1425500 | AT2G37050.1 | 25.882 | 510 | 316 | 19 | 22 | 504 | 31 | 505 | 1.56e-26 | 115 |
Msa1425500 | AT2G37050.3 | 25.882 | 510 | 316 | 19 | 22 | 504 | 31 | 505 | 1.57e-26 | 115 |
Msa1425500 | AT1G51820.1 | 25.000 | 444 | 281 | 17 | 65 | 494 | 78 | 483 | 1.70e-26 | 115 |
Msa1425500 | AT5G59650.2 | 27.212 | 452 | 271 | 17 | 66 | 494 | 83 | 499 | 4.11e-26 | 114 |
Msa1425500 | AT1G51805.1 | 26.077 | 441 | 281 | 18 | 65 | 494 | 78 | 484 | 6.07e-26 | 114 |
Msa1425500 | AT1G51805.2 | 25.624 | 441 | 259 | 19 | 65 | 494 | 78 | 460 | 1.29e-24 | 109 |
Msa1425500 | AT2G28970.2 | 29.333 | 375 | 230 | 18 | 132 | 494 | 5 | 356 | 1.35e-24 | 109 |
Msa1425500 | AT1G51810.1 | 28.338 | 367 | 227 | 15 | 142 | 494 | 14 | 358 | 4.77e-24 | 107 |
Msa1425500 | AT4G29180.3 | 28.000 | 500 | 286 | 26 | 14 | 481 | 23 | 480 | 9.41e-24 | 107 |
Msa1425500 | AT4G29180.2 | 28.000 | 500 | 286 | 26 | 14 | 481 | 23 | 480 | 9.86e-24 | 107 |
Msa1425500 | AT2G19230.2 | 25.470 | 479 | 309 | 20 | 22 | 481 | 33 | 482 | 1.01e-23 | 107 |
Msa1425500 | AT3G46330.2 | 26.034 | 411 | 268 | 17 | 59 | 461 | 77 | 459 | 1.21e-23 | 106 |
Msa1425500 | AT2G19230.1 | 25.470 | 479 | 309 | 20 | 22 | 481 | 33 | 482 | 1.79e-23 | 106 |
Msa1425500 | AT1G51870.1 | 25.771 | 454 | 260 | 20 | 22 | 443 | 32 | 440 | 1.71e-22 | 103 |
Msa1425500 | AT2G28960.1 | 27.507 | 349 | 223 | 13 | 142 | 481 | 17 | 344 | 1.76e-22 | 102 |
Msa1425500 | AT5G59660.3 | 39.333 | 150 | 86 | 5 | 347 | 494 | 284 | 430 | 1.41e-20 | 97.1 |
Msa1425500 | AT1G51860.2 | 26.757 | 441 | 245 | 18 | 150 | 572 | 14 | 394 | 1.83e-20 | 96.3 |
Msa1425500 | AT4G29450.1 | 27.235 | 481 | 271 | 20 | 35 | 481 | 46 | 481 | 7.38e-20 | 94.7 |
Msa1425500 | AT2G28970.1 | 29.630 | 324 | 198 | 16 | 183 | 494 | 86 | 391 | 1.42e-18 | 90.5 |
Msa1425500 | AT5G59660.1 | 36.242 | 149 | 89 | 5 | 347 | 494 | 284 | 427 | 4.52e-18 | 89.0 |
Msa1425500 | AT5G59660.2 | 36.242 | 149 | 89 | 5 | 347 | 494 | 262 | 405 | 5.05e-18 | 89.0 |
Msa1425500 | AT1G51890.4 | 26.898 | 461 | 236 | 24 | 139 | 571 | 75 | 462 | 1.82e-17 | 87.0 |
Msa1425500 | AT1G51820.2 | 33.962 | 159 | 101 | 4 | 338 | 494 | 65 | 221 | 2.74e-17 | 86.3 |
Msa1425500 | AT4G29180.1 | 25.150 | 501 | 282 | 25 | 14 | 462 | 23 | 482 | 1.87e-16 | 84.0 |
Msa1425500 | AT5G16900.4 | 27.365 | 296 | 172 | 12 | 210 | 481 | 20 | 296 | 2.09e-16 | 83.6 |
Msa1425500 | AT3G46280.1 | 25.627 | 359 | 223 | 15 | 19 | 362 | 24 | 353 | 3.33e-16 | 82.0 |
Msa1425500 | AT1G51830.1 | 29.108 | 213 | 129 | 8 | 280 | 481 | 80 | 281 | 5.44e-16 | 82.0 |
Msa1425500 | AT1G51830.2 | 29.108 | 213 | 129 | 8 | 280 | 481 | 87 | 288 | 5.44e-16 | 82.0 |
Msa1425500 | AT1G51890.5 | 31.878 | 229 | 110 | 10 | 347 | 571 | 68 | 254 | 2.00e-15 | 80.1 |
Msa1425500 | AT3G28450.1 | 31.390 | 223 | 117 | 7 | 369 | 564 | 34 | 247 | 6.34e-15 | 78.6 |
Msa1425500 | AT5G63710.2 | 30.396 | 227 | 137 | 9 | 359 | 576 | 8 | 222 | 9.59e-15 | 77.8 |
Msa1425500 | AT5G63710.4 | 30.396 | 227 | 137 | 9 | 359 | 576 | 8 | 222 | 9.59e-15 | 77.8 |
Msa1425500 | AT5G63710.3 | 30.942 | 223 | 133 | 9 | 363 | 576 | 48 | 258 | 9.63e-15 | 78.2 |
Msa1425500 | AT5G63710.1 | 30.942 | 223 | 133 | 9 | 363 | 576 | 47 | 257 | 9.69e-15 | 78.2 |
Msa1425500 | AT5G21090.1 | 36.709 | 158 | 86 | 7 | 371 | 524 | 33 | 180 | 2.45e-14 | 73.2 |
Msa1425500 | AT3G43740.1 | 37.975 | 158 | 84 | 7 | 371 | 524 | 33 | 180 | 5.18e-14 | 72.0 |
Msa1425500 | AT5G10290.1 | 36.879 | 141 | 77 | 7 | 368 | 504 | 30 | 162 | 6.81e-14 | 75.5 |
Msa1425500 | AT5G10290.2 | 36.879 | 141 | 77 | 7 | 368 | 504 | 30 | 162 | 6.81e-14 | 75.5 |
Msa1425500 | AT5G37450.2 | 33.333 | 171 | 105 | 5 | 339 | 504 | 3 | 169 | 8.77e-14 | 75.5 |
Msa1425500 | AT5G37450.3 | 33.333 | 171 | 105 | 5 | 339 | 504 | 3 | 169 | 1.13e-13 | 75.1 |
Msa1425500 | AT5G06820.1 | 35.227 | 176 | 96 | 8 | 357 | 527 | 20 | 182 | 2.23e-13 | 73.9 |
Msa1425500 | AT3G46350.1 | 25.856 | 263 | 166 | 10 | 58 | 316 | 76 | 313 | 3.45e-13 | 72.4 |
Msa1425500 | AT3G46260.1 | 25.501 | 349 | 222 | 17 | 22 | 357 | 31 | 354 | 5.30e-13 | 72.0 |
Msa1425500 | AT2G20850.1 | 35.359 | 181 | 95 | 9 | 349 | 519 | 12 | 180 | 7.92e-13 | 72.0 |
Msa1425500 | AT2G20850.2 | 35.359 | 181 | 95 | 9 | 349 | 519 | 12 | 180 | 1.08e-12 | 71.6 |
Msa1425500 | AT1G78980.1 | 34.118 | 170 | 88 | 7 | 338 | 502 | 6 | 156 | 3.43e-12 | 70.1 |
Msa1425500 | AT5G46330.2 | 36.765 | 136 | 80 | 5 | 419 | 550 | 678 | 811 | 5.51e-12 | 69.7 |
Msa1425500 | AT5G46330.1 | 36.765 | 136 | 80 | 5 | 419 | 550 | 678 | 811 | 5.51e-12 | 69.7 |
Msa1425500 | AT1G72180.1 | 40.367 | 109 | 61 | 2 | 416 | 523 | 484 | 589 | 7.89e-12 | 68.9 |
Msa1425500 | AT1G11130.1 | 34.194 | 155 | 86 | 6 | 369 | 519 | 31 | 173 | 8.32e-12 | 68.9 |
Msa1425500 | AT1G08590.1 | 39.640 | 111 | 63 | 3 | 416 | 524 | 510 | 618 | 1.70e-11 | 68.2 |
Msa1425500 | AT2G13800.3 | 31.034 | 174 | 103 | 6 | 368 | 534 | 27 | 190 | 2.53e-11 | 67.0 |
Msa1425500 | AT2G13800.1 | 31.034 | 174 | 103 | 6 | 368 | 534 | 27 | 190 | 2.53e-11 | 67.0 |
Msa1425500 | AT2G25440.1 | 35.043 | 117 | 72 | 3 | 417 | 531 | 492 | 606 | 3.93e-11 | 66.6 |
Msa1425500 | AT3G13065.1 | 32.716 | 162 | 92 | 7 | 364 | 520 | 27 | 176 | 5.30e-11 | 66.2 |
Msa1425500 | AT5G37450.1 | 29.240 | 171 | 112 | 5 | 339 | 504 | 3 | 169 | 5.37e-11 | 66.2 |
Msa1425500 | AT2G33050.1 | 33.858 | 127 | 80 | 3 | 407 | 531 | 585 | 709 | 6.67e-11 | 65.9 |
Msa1425500 | AT2G32660.1 | 33.071 | 127 | 81 | 3 | 407 | 531 | 400 | 524 | 6.75e-11 | 65.9 |
Msa1425500 | AT1G71830.1 | 31.977 | 172 | 104 | 6 | 367 | 534 | 28 | 190 | 7.68e-11 | 65.5 |
Msa1425500 | AT1G34210.1 | 31.977 | 172 | 104 | 6 | 367 | 534 | 31 | 193 | 9.57e-11 | 65.5 |
Msa1425500 | AT1G34210.2 | 31.977 | 172 | 104 | 6 | 367 | 534 | 31 | 193 | 9.57e-11 | 65.5 |
Msa1425500 | AT4G13880.1 | 36.752 | 117 | 66 | 4 | 419 | 531 | 560 | 672 | 9.75e-11 | 65.5 |
Find 189 sgRNAs with CRISPR-Local
Find 548 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTAAGCTTGTTGCTGTTTC+TGG | 0.073874 | tig0025858:+61705 | Msa1425500:CDS |
TATCATCATGTCCTATGTTT+TGG | 0.175653 | tig0025858:+64614 | Msa1425500:CDS |
CTTGGCAGTCAAGGCTTAAA+AGG | 0.223624 | tig0025858:+62509 | Msa1425500:CDS |
TCTGATCTTACACTTGTATC+AGG | 0.250590 | tig0025858:-63106 | Msa1425500:intergenic |
AGCAAAGGCTTTAAGCTATA+TGG | 0.254304 | tig0025858:+66204 | Msa1425500:three_prime_UTR |
AAATTTGAGTAGTAATGTTT+TGG | 0.265295 | tig0025858:+61680 | Msa1425500:CDS |
ACCTTTGATGAATGTATATT+AGG | 0.273813 | tig0025858:+65898 | Msa1425500:three_prime_UTR |
CCGTCGCGTGCGGTGGATTC+AGG | 0.279601 | tig0025858:-61072 | Msa1425500:intergenic |
CATGCGGCTCCGGTGATCAT+TGG | 0.281833 | tig0025858:+61274 | Msa1425500:CDS |
ATGCGGCTCCGGTGATCATT+GGG | 0.309723 | tig0025858:+61275 | Msa1425500:CDS |
ACATGCTATAGAGGAGTAAA+AGG | 0.313768 | tig0025858:-65643 | Msa1425500:intergenic |
AAGGAATCGCTTCGAGTTCC+AGG | 0.328067 | tig0025858:+61968 | Msa1425500:CDS |
TGCGCATTTGACGATGATTT+CGG | 0.332297 | tig0025858:+65829 | Msa1425500:three_prime_UTR |
AACTTGAGTTCGAATTCCTT+GGG | 0.350082 | tig0025858:+63050 | Msa1425500:CDS |
CCTTCCACTCACCCTCTTCA+AGG | 0.354412 | tig0025858:+61777 | Msa1425500:CDS |
AGAGCCGGTTAAGTGATTAT+TGG | 0.355788 | tig0025858:-63596 | Msa1425500:intergenic |
CCTCTGATATTTGTTTCTCT+TGG | 0.359314 | tig0025858:-65563 | Msa1425500:intergenic |
TTTCTTTATCATGCTTTACT+TGG | 0.362445 | tig0025858:-66086 | Msa1425500:intergenic |
CTCCTACAACTTGGGATGCT+TGG | 0.363317 | tig0025858:+62020 | Msa1425500:CDS |
CAATTTCTTCCGGTTCGGTT+CGG | 0.369881 | tig0025858:-61359 | Msa1425500:intergenic |
CGGCTCTATACCTGACAGTT+TGG | 0.381864 | tig0025858:+63612 | Msa1425500:CDS |
TTCATTAAAACATGCTATAG+AGG | 0.383586 | tig0025858:-65652 | Msa1425500:intergenic |
ATCAGTATCGTTGGTGAAGC+CGG | 0.386261 | tig0025858:-61301 | Msa1425500:intergenic |
AAACTTGAGTTCGAATTCCT+TGG | 0.395989 | tig0025858:+63049 | Msa1425500:CDS |
TGTACTCACCCATTACTTCA+TGG | 0.396316 | tig0025858:-64768 | Msa1425500:intergenic |
TTATCCAATAATCACTTAAC+CGG | 0.398157 | tig0025858:+63592 | Msa1425500:CDS |
TCCTACAACTTGGGATGCTT+GGG | 0.403579 | tig0025858:+62021 | Msa1425500:CDS |
ATGAGTATGTGTTAATGTTA+TGG | 0.409943 | tig0025858:+66138 | Msa1425500:three_prime_UTR |
CACTAAACTCGCAGCTGAAA+TGG | 0.410465 | tig0025858:-65940 | Msa1425500:intergenic |
AAAAGGAACGATTATGACTT+TGG | 0.411238 | tig0025858:+64739 | Msa1425500:CDS |
AAAACTCTGACAATTTCTTC+CGG | 0.411927 | tig0025858:-61369 | Msa1425500:intergenic |
TCTGGTGCTCCTTTGATTTG+TGG | 0.414322 | tig0025858:+61723 | Msa1425500:CDS |
ATCCCTGTGCTCCTACAACT+TGG | 0.426893 | tig0025858:+62011 | Msa1425500:CDS |
AGCTTCATCGGAAAATAATT+CGG | 0.429177 | tig0025858:-61429 | Msa1425500:intergenic |
ATCATTGATGATTCTTGAGC+TGG | 0.430224 | tig0025858:+65591 | Msa1425500:CDS |
TCATACGAAGCGGAATTTAC+AGG | 0.433583 | tig0025858:-61201 | Msa1425500:intergenic |
CTTTATTCTGTTGGCGTGCA+CGG | 0.435292 | tig0025858:+64060 | Msa1425500:CDS |
TCTGACAATTTCTTCCGGTT+CGG | 0.435633 | tig0025858:-61364 | Msa1425500:intergenic |
GGAGAGCCATGTTGTGTTGA+AGG | 0.442022 | tig0025858:-60791 | Msa1425500:intergenic |
CTTCATCCGGCTGCCATGAC+CGG | 0.442238 | tig0025858:-61332 | Msa1425500:intergenic |
GACGGTGGTGGTGGCGCCGC+CGG | 0.442389 | tig0025858:-60827 | Msa1425500:intergenic |
GGTCTACCCCATGAAGTAAT+GGG | 0.451649 | tig0025858:+64760 | Msa1425500:CDS |
CCTCCGTCGTCACCGCCGTT+TGG | 0.452443 | tig0025858:-61455 | Msa1425500:intergenic |
TTTCTGCGTGGTACTGCTGC+TGG | 0.454474 | tig0025858:+64696 | Msa1425500:CDS |
GTTGAAGATGCCAAACTGTC+AGG | 0.460099 | tig0025858:-63622 | Msa1425500:intergenic |
TTCTTCCCTTCCTCCTCCTC+CGG | 0.461071 | tig0025858:+60895 | Msa1425500:CDS |
CGGAGGAGGTAGCGAGAAGA+AGG | 0.461089 | tig0025858:-60949 | Msa1425500:intergenic |
ACCAACGATACTGATAAATT+CGG | 0.463808 | tig0025858:+61309 | Msa1425500:CDS |
TTCACCTTTCATGACATGGC+TGG | 0.463978 | tig0025858:-58532 | Msa1425500:intergenic |
GCTTCGAGTTCCAGGTAGAA+TGG | 0.465025 | tig0025858:+61976 | Msa1425500:CDS |
ATCCCAAGTTGTAGGAGCAC+AGG | 0.466211 | tig0025858:-62014 | Msa1425500:intergenic |
GCCGCTGATCTTTGCTTCTA+CGG | 0.466510 | tig0025858:+61135 | Msa1425500:CDS |
TCCGGTGATCATTGGGGCGC+CGG | 0.466791 | tig0025858:+61282 | Msa1425500:CDS |
GAAGCAAAGATCAGCGGCGG+AGG | 0.466839 | tig0025858:-61130 | Msa1425500:intergenic |
TTCTTTATCATGCTTTACTT+GGG | 0.467409 | tig0025858:-66085 | Msa1425500:intergenic |
GTTGATATTTACAAAGAAGT+GGG | 0.471309 | tig0025858:+61621 | Msa1425500:CDS |
TGAATTACATTTCAGTAATG+AGG | 0.471503 | tig0025858:-62084 | Msa1425500:intergenic |
AAGTGCTATGAAGGCATTGA+AGG | 0.475925 | tig0025858:+61949 | Msa1425500:CDS |
GTAGCGAGAAGAAGGAAGTG+AGG | 0.483451 | tig0025858:-60941 | Msa1425500:intergenic |
CCAGAGCAACTTTATTCTGT+TGG | 0.485444 | tig0025858:+64051 | Msa1425500:CDS |
GTACTCACCCATTACTTCAT+GGG | 0.485738 | tig0025858:-64767 | Msa1425500:intergenic |
CACCGTGAATGGTACTGAAA+AGG | 0.486056 | tig0025858:+61404 | Msa1425500:CDS |
TATGGTGTGGCTGCATTTCG+CGG | 0.487390 | tig0025858:+61524 | Msa1425500:CDS |
GGATGCGAAGATGGACTATA+TGG | 0.488407 | tig0025858:+61506 | Msa1425500:CDS |
TGAAGCATTCCGAACCGAAC+CGG | 0.490845 | tig0025858:+61350 | Msa1425500:CDS |
ATTTCGGACCATCGTATAAG+AGG | 0.490999 | tig0025858:+65845 | Msa1425500:three_prime_UTR |
TGGCTCCGAGACGGTGGTGG+TGG | 0.492848 | tig0025858:-60836 | Msa1425500:intergenic |
ATTCGGCCGGTCATGGCAGC+CGG | 0.496081 | tig0025858:+61326 | Msa1425500:CDS |
TGGTCTACCCCATGAAGTAA+TGG | 0.496519 | tig0025858:+64759 | Msa1425500:CDS |
CTGATAAATTCGGCCGGTCA+TGG | 0.496522 | tig0025858:+61319 | Msa1425500:CDS |
GCATTGCGTCAAGGTCGAGC+AGG | 0.501427 | tig0025858:-65760 | Msa1425500:intergenic |
TAGCGAGAAGAAGGAAGTGA+GGG | 0.504555 | tig0025858:-60940 | Msa1425500:intergenic |
CTTCGAGTTCCAGGTAGAAT+GGG | 0.507791 | tig0025858:+61977 | Msa1425500:CDS |
TCCGATGAAGCTTTACCAAA+CGG | 0.508588 | tig0025858:+61440 | Msa1425500:CDS |
GTAACACAGTTGTAGCAATA+CGG | 0.509893 | tig0025858:-66241 | Msa1425500:intergenic |
AGCATAAGCGCCGTCGCGTG+CGG | 0.511148 | tig0025858:-61082 | Msa1425500:intergenic |
CCATTCCATCCCATTCTACC+TGG | 0.511572 | tig0025858:-61986 | Msa1425500:intergenic |
GCTATTGAATGGTAACCTAC+TGG | 0.511811 | tig0025858:+64017 | Msa1425500:CDS |
TTTATCATCACTCATACGGC+AGG | 0.512655 | tig0025858:-62053 | Msa1425500:intergenic |
TTCAGAAATCTTGGCAGTCA+AGG | 0.513349 | tig0025858:+62500 | Msa1425500:intron |
AAAAGGTGAAGGGAATCCTT+TGG | 0.514538 | tig0025858:-65626 | Msa1425500:intergenic |
GGGTGAAATACCATCAGGAC+TGG | 0.514731 | tig0025858:+63073 | Msa1425500:CDS |
AGACGGTGAAGGTGCGGAGG+AGG | 0.514997 | tig0025858:-60963 | Msa1425500:intergenic |
TCGGTTCGGAATGCTTCATC+CGG | 0.517203 | tig0025858:-61345 | Msa1425500:intergenic |
GCCGCAGTTAATGTGGTATG+AGG | 0.519419 | tig0025858:-60746 | Msa1425500:intergenic |
TTTCTGAGGGGAGGTTGAAA+CGG | 0.521325 | tig0025858:-60861 | Msa1425500:intergenic |
ATTGAGTGTGGATGCGAAGA+TGG | 0.522264 | tig0025858:+61497 | Msa1425500:CDS |
GGTAGAGTTTCATGCGGCTC+CGG | 0.524047 | tig0025858:+61264 | Msa1425500:CDS |
TCCCAAGCATCCCAAGTTGT+AGG | 0.527416 | tig0025858:-62022 | Msa1425500:intergenic |
CGTGCGGTGGATTCAGGCCA+TGG | 0.528228 | tig0025858:-61066 | Msa1425500:intergenic |
AGGAGGAGGAAGGGAAGAAG+CGG | 0.528579 | tig0025858:-60891 | Msa1425500:intergenic |
TCAACAGAGAACACCGTGAA+TGG | 0.531402 | tig0025858:+61393 | Msa1425500:CDS |
GAGTGGCTCCGAGACGGTGG+TGG | 0.532985 | tig0025858:-60839 | Msa1425500:intergenic |
AACTTCATTCTTGTTAACTA+CGG | 0.533727 | tig0025858:+61243 | Msa1425500:CDS |
TTGGCAGTCAAGGCTTAAAA+GGG | 0.533821 | tig0025858:+62510 | Msa1425500:CDS |
AGTTGATATTTACAAAGAAG+TGG | 0.534872 | tig0025858:+61620 | Msa1425500:CDS |
GAGAGCCATGTTGTGTTGAA+GGG | 0.540481 | tig0025858:-60790 | Msa1425500:intergenic |
AACGGCGGTGACGACGGAGG+AGG | 0.541688 | tig0025858:+61458 | Msa1425500:CDS |
AGCAAGGCGGATTATCGACT+CGG | 0.542150 | tig0025858:+64638 | Msa1425500:CDS |
GCCGAATTTATCAGTATCGT+TGG | 0.543701 | tig0025858:-61310 | Msa1425500:intergenic |
CGGCGCCACCACCACCGTCT+CGG | 0.543708 | tig0025858:+60831 | Msa1425500:CDS |
ACAGTGAGACATGGAGGCAG+TGG | 0.543741 | tig0025858:+58497 | None:intergenic |
ATAAGCGCCGTCGCGTGCGG+TGG | 0.545907 | tig0025858:-61079 | Msa1425500:intergenic |
TGCGTCGTAGTTGTCGTAGA+CGG | 0.549286 | tig0025858:-60980 | Msa1425500:intergenic |
GCCGTTTGGTAAAGCTTCAT+CGG | 0.551037 | tig0025858:-61441 | Msa1425500:intergenic |
GTCTCTGCCAGGCTATTGAA+TGG | 0.551585 | tig0025858:+64006 | Msa1425500:intron |
GGAGGCAGTGGATGCAGAGG+AGG | 0.551745 | tig0025858:+58509 | Msa1425500:CDS |
CATGGAGGCAGTGGATGCAG+AGG | 0.551774 | tig0025858:+58506 | None:intergenic |
ATATCTACATCAGAAAGAAA+AGG | 0.551812 | tig0025858:+64722 | Msa1425500:CDS |
TGGCGCCGCCGGTGTAGTAA+CGG | 0.555587 | tig0025858:-60816 | Msa1425500:intergenic |
CCAACAGAATAAAGTTGCTC+TGG | 0.556512 | tig0025858:-64051 | Msa1425500:intergenic |
CCTGAATCCACCGCACGCGA+CGG | 0.556852 | tig0025858:+61072 | Msa1425500:CDS |
TATAGAGGAGTAAAAGGTGA+AGG | 0.556956 | tig0025858:-65637 | Msa1425500:intergenic |
TCCCTGTGCTCCTACAACTT+GGG | 0.557396 | tig0025858:+62012 | Msa1425500:CDS |
CCTTGAAGAGGGTGAGTGGA+AGG | 0.559241 | tig0025858:-61777 | Msa1425500:intergenic |
GTAGTTGTCGTAGACGGTGA+AGG | 0.560473 | tig0025858:-60974 | Msa1425500:intergenic |
GGTGAAATACCATCAGGACT+GGG | 0.562074 | tig0025858:+63074 | Msa1425500:CDS |
CCAGGTAGAATGGGATGGAA+TGG | 0.563862 | tig0025858:+61986 | Msa1425500:CDS |
GAGAGTGCAACGTCGAAGGA+AGG | 0.564368 | tig0025858:-61015 | Msa1425500:intergenic |
TCCTAATATACATTCATCAA+AGG | 0.565418 | tig0025858:-65899 | Msa1425500:intergenic |
CTGATCTTACACTTGTATCA+GGG | 0.565959 | tig0025858:-63105 | Msa1425500:intergenic |
GGAGGAGAGTGCAACGTCGA+AGG | 0.568653 | tig0025858:-61019 | Msa1425500:intergenic |
CCGCCTTGCTCCCAAAACAT+AGG | 0.568776 | tig0025858:-64625 | Msa1425500:intergenic |
TCAGCTGCGAGTTTAGTGTC+CGG | 0.573250 | tig0025858:+65945 | Msa1425500:three_prime_UTR |
GAGTTCCAGGTAGAATGGGA+TGG | 0.574326 | tig0025858:+61981 | Msa1425500:CDS |
ATTCAGTCTCTCAAGCAACA+AGG | 0.574855 | tig0025858:+64570 | Msa1425500:intron |
TTCAGTCTCTCAAGCAACAA+GGG | 0.575617 | tig0025858:+64571 | Msa1425500:intron |
GCCGGCGCCCCAATGATCAC+CGG | 0.581569 | tig0025858:-61283 | Msa1425500:intergenic |
TATTCTGTTGGCGTGCACGG+TGG | 0.583936 | tig0025858:+64063 | Msa1425500:CDS |
GAGGCCAGCCATGTCATGAA+AGG | 0.588592 | tig0025858:+58528 | Msa1425500:CDS |
CCAGTTGAAAATGATGGTGG+AGG | 0.589159 | tig0025858:-61037 | Msa1425500:intergenic |
GCAAGGCGGATTATCGACTC+GGG | 0.589609 | tig0025858:+64639 | Msa1425500:CDS |
AAAACCTTGAAGAGGGTGAG+TGG | 0.590546 | tig0025858:-61781 | Msa1425500:intergenic |
AAGCAAAGATCAGCGGCGGA+GGG | 0.590897 | tig0025858:-61129 | Msa1425500:intergenic |
ATAGAGGAGTAAAAGGTGAA+GGG | 0.593612 | tig0025858:-65636 | Msa1425500:intergenic |
CATTGCGTCAAGGTCGAGCA+GGG | 0.593861 | tig0025858:-65759 | Msa1425500:intergenic |
CTGGCACTCGTCCTTCCAGT+AGG | 0.596614 | tig0025858:-64032 | Msa1425500:intergenic |
GCCGCCGGTGTAGTAACGGT+CGG | 0.600805 | tig0025858:-60812 | Msa1425500:intergenic |
TCAAGCAACAAGGGTTTGTG+TGG | 0.602353 | tig0025858:+64580 | Msa1425500:CDS |
AGTTCGATTGATGAGATGAT+CGG | 0.602669 | tig0025858:-61174 | Msa1425500:intergenic |
AATAATTCAATGTAAGCTTG+TGG | 0.605271 | tig0025858:+65733 | Msa1425500:three_prime_UTR |
TACTCACCCATTACTTCATG+GGG | 0.605464 | tig0025858:-64766 | Msa1425500:intergenic |
TCGTATGATTCTAACTCCAC+CGG | 0.607134 | tig0025858:+61216 | Msa1425500:CDS |
TGATGAGATGATCGGAGCAT+CGG | 0.608101 | tig0025858:-61166 | Msa1425500:intergenic |
AGCAGCATTGCATTGCGTCA+AGG | 0.615385 | tig0025858:-65769 | Msa1425500:intergenic |
TTCTCAATACCACAAATCAA+AGG | 0.615729 | tig0025858:-61732 | Msa1425500:intergenic |
TCCCAAGTTGTAGGAGCACA+GGG | 0.616318 | tig0025858:-62013 | Msa1425500:intergenic |
CTTGAGTTCGAATTCCTTGG+GGG | 0.616425 | tig0025858:+63052 | Msa1425500:CDS |
AGCGAGAAGAAGGAAGTGAG+GGG | 0.618388 | tig0025858:-60939 | Msa1425500:intergenic |
ACGGAGTGGCTCCGAGACGG+TGG | 0.622129 | tig0025858:-60842 | Msa1425500:intergenic |
CAGACCCCTTCAACACAACA+TGG | 0.622219 | tig0025858:+60785 | Msa1425500:CDS |
ACGGCATGCCTCTTATACGA+TGG | 0.622369 | tig0025858:-65853 | Msa1425500:intergenic |
TGGTATTGAGAATTATGCAT+TGG | 0.622429 | tig0025858:+61743 | Msa1425500:CDS |
AGAGCCATGTTGTGTTGAAG+GGG | 0.622435 | tig0025858:-60789 | Msa1425500:intergenic |
ACTTGAGTTCGAATTCCTTG+GGG | 0.623399 | tig0025858:+63051 | Msa1425500:CDS |
GAAACGGAGTGGCTCCGAGA+CGG | 0.624248 | tig0025858:-60845 | Msa1425500:intergenic |
TGTCGTAGACGGTGAAGGTG+CGG | 0.624271 | tig0025858:-60969 | Msa1425500:intergenic |
TTACCAAACGGCGGTGACGA+CGG | 0.624674 | tig0025858:+61452 | Msa1425500:CDS |
TTGAAGTGCCGCAGTTAATG+TGG | 0.625396 | tig0025858:-60753 | Msa1425500:intergenic |
AGAACGCCAGTTGAAAATGA+TGG | 0.627133 | tig0025858:-61043 | Msa1425500:intergenic |
ACAACTTGGGATGCTTGGGA+AGG | 0.628183 | tig0025858:+62025 | Msa1425500:CDS |
CGTAGACGGTGAAGGTGCGG+AGG | 0.629380 | tig0025858:-60966 | Msa1425500:intergenic |
CAAACTGTCAGGTATAGAGC+CGG | 0.630464 | tig0025858:-63611 | Msa1425500:intergenic |
TTGAGTTCGAATTCCTTGGG+GGG | 0.635459 | tig0025858:+63053 | Msa1425500:CDS |
GACGACGGAGGAGGAGACGT+TGG | 0.639543 | tig0025858:+61467 | Msa1425500:CDS |
AGTGCAACGTCGAAGGAAGG+AGG | 0.640604 | tig0025858:-61012 | Msa1425500:intergenic |
CTGGAGAGTCAACACGCCAA+AGG | 0.643105 | tig0025858:+65610 | Msa1425500:CDS |
CTCTCCGACCGTTACTACAC+CGG | 0.643735 | tig0025858:+60808 | Msa1425500:CDS |
ATCGTATAAGAGGCATGCCG+TGG | 0.648585 | tig0025858:+65855 | Msa1425500:three_prime_UTR |
ACGCCAGTTGAAAATGATGG+TGG | 0.648693 | tig0025858:-61040 | Msa1425500:intergenic |
GCCGTAGAAGCAAAGATCAG+CGG | 0.649920 | tig0025858:-61136 | Msa1425500:intergenic |
ACGATACTGATAAATTCGGC+CGG | 0.650645 | tig0025858:+61313 | Msa1425500:CDS |
CCAAGAGAAACAAATATCAG+AGG | 0.652998 | tig0025858:+65563 | Msa1425500:CDS |
GTAGAAGCAAAGATCAGCGG+CGG | 0.656543 | tig0025858:-61133 | Msa1425500:intergenic |
TTGAATGGTAACCTACTGGA+AGG | 0.662357 | tig0025858:+64021 | Msa1425500:CDS |
GAGGGGAGGTTGAAACGGAG+TGG | 0.668857 | tig0025858:-60856 | Msa1425500:intergenic |
TGCGGCTCCGGTGATCATTG+GGG | 0.670365 | tig0025858:+61276 | Msa1425500:CDS |
CCAAACGGCGGTGACGACGG+AGG | 0.673808 | tig0025858:+61455 | Msa1425500:CDS |
ATAGGACATGATGATAGAGA+TGG | 0.675366 | tig0025858:-64607 | Msa1425500:intergenic |
TCCGACCGTTACTACACCGG+CGG | 0.678732 | tig0025858:+60811 | Msa1425500:CDS |
AACTACGGTAGAGTTTCATG+CGG | 0.688627 | tig0025858:+61258 | Msa1425500:CDS |
TCCTCATACCACATTAACTG+CGG | 0.690190 | tig0025858:+60745 | Msa1425500:CDS |
GGAGTTAGAATCATACGAAG+CGG | 0.698239 | tig0025858:-61211 | Msa1425500:intergenic |
AATGCTGCTTCATCACAATG+AGG | 0.704080 | tig0025858:+65783 | Msa1425500:three_prime_UTR |
CAAGGCGGATTATCGACTCG+GGG | 0.719373 | tig0025858:+64640 | Msa1425500:CDS |
GTTGGAGTACGAATTGAGTG+TGG | 0.722672 | tig0025858:+61485 | Msa1425500:CDS |
GAATGCTAGTGATATTACCA+CGG | 0.722719 | tig0025858:-65872 | Msa1425500:intergenic |
GATGAAGCTTTACCAAACGG+CGG | 0.725813 | tig0025858:+61443 | Msa1425500:CDS |
CGAAGATGGACTATATGGTG+TGG | 0.730949 | tig0025858:+61511 | Msa1425500:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTTAATTATGATATAAAT+TGG | - | tig0025858:59520-59539 | Msa1425500:intergenic | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59032-59051 | Msa1425500:intron | 100.0% |
!! | TATATGTTTATTATGAAGTA+CGG | + | tig0025858:59128-59147 | Msa1425500:intron | 15.0% |
!!! | ATGTAATCTTTTTATCAAAT+TGG | - | tig0025858:59917-59936 | Msa1425500:intergenic | 15.0% |
!! | TGAATGAAATTATAAAGTTT+CGG | - | tig0025858:60133-60152 | Msa1425500:intergenic | 15.0% |
!!! | TTTCTTTTCAAAATATTTTC+AGG | + | tig0025858:60715-60734 | Msa1425500:intron | 15.0% |
!!! | AAGTATTTTTTTTTCTTTCT+CGG | + | tig0025858:61813-61832 | Msa1425500:intron | 15.0% |
!! | GAAAAGTTACAATTATATAA+CGG | - | tig0025858:63016-63035 | Msa1425500:intergenic | 15.0% |
!! | TTTATAATTGTAAATGACTT+TGG | - | tig0025858:63378-63397 | Msa1425500:intergenic | 15.0% |
!!! | ATTTAATTAAATTTTCCTTC+TGG | - | tig0025858:63522-63541 | Msa1425500:intergenic | 15.0% |
!! | AGATTAATGTAAATTCAAAA+TGG | - | tig0025858:64241-64260 | Msa1425500:intergenic | 15.0% |
!! | ATTTACATTAATCTATTTGA+AGG | + | tig0025858:64247-64266 | Msa1425500:intron | 15.0% |
!! | ACTATAATTGTTATCTAATA+TGG | + | tig0025858:64422-64441 | Msa1425500:intron | 15.0% |
!!! | TTTTTTCATTACTAATTGTT+TGG | + | tig0025858:64926-64945 | Msa1425500:intron | 15.0% |
!!! | TAAATATGTTTTGTACATAT+AGG | + | tig0025858:65041-65060 | Msa1425500:intron | 15.0% |
!! | AATTAAAATCAGATTTATGA+AGG | - | tig0025858:65147-65166 | Msa1425500:intergenic | 15.0% |
!!! | TTCATAAATCTGATTTTAAT+TGG | + | tig0025858:65146-65165 | Msa1425500:intron | 15.0% |
!!! | TCATAAATCTGATTTTAATT+GGG | + | tig0025858:65147-65166 | Msa1425500:intron | 15.0% |
!!! | TTTTTTTTAACAGGATTCTA+TGG | + | tig0025858:58915-58934 | Msa1425500:intron | 20.0% |
!!! | ATAGACATAACTATAGTTTT+AGG | + | tig0025858:59230-59249 | Msa1425500:intron | 20.0% |
!! | AAGAAAATATGTTAAAGAGT+AGG | + | tig0025858:59332-59351 | Msa1425500:intron | 20.0% |
!! | AGCATAGATAATTAAAAAAG+AGG | - | tig0025858:59753-59772 | Msa1425500:intergenic | 20.0% |
!! | TGATAAAAAGATTACATTCT+TGG | + | tig0025858:59920-59939 | Msa1425500:intron | 20.0% |
!! | GATAAAAAGATTACATTCTT+GGG | + | tig0025858:59921-59940 | Msa1425500:intron | 20.0% |
!! | ATAAATCCGTTAAAAAAAAG+AGG | + | tig0025858:59964-59983 | Msa1425500:intron | 20.0% |
!!! | AAACTACCTCTTTTTTTTAA+CGG | - | tig0025858:59973-59992 | Msa1425500:intergenic | 20.0% |
!! | AAAAGAGGTAGTTTAATAAA+TGG | + | tig0025858:59979-59998 | Msa1425500:intron | 20.0% |
!!! | TGGTAACTGTTTTATTTTTA+TGG | + | tig0025858:59999-60018 | Msa1425500:intron | 20.0% |
!!! | TATAAAGTTTCGGTTTTAAA+TGG | - | tig0025858:60123-60142 | Msa1425500:intergenic | 20.0% |
!!! | TAAATGTCTATTGATTGATT+AGG | + | tig0025858:60179-60198 | Msa1425500:intron | 20.0% |
!!! | TTTTCATTTTGCAAAAGTTA+CGG | - | tig0025858:60623-60642 | Msa1425500:intergenic | 20.0% |
!!! | AAATTTGAGTAGTAATGTTT+TGG | + | tig0025858:61680-61699 | Msa1425500:CDS | 20.0% |
!!! | AATTTGAGTAGTAATGTTTT+GGG | + | tig0025858:61681-61700 | Msa1425500:CDS | 20.0% |
!! | GAAAAAAAAATACTTGTAAG+AGG | - | tig0025858:61808-61827 | Msa1425500:intergenic | 20.0% |
!! | TTACAAATCTAGATTAATCA+TGG | - | tig0025858:62670-62689 | Msa1425500:intergenic | 20.0% |
!! | ACAATATTTATCTTCTGATA+TGG | + | tig0025858:62809-62828 | Msa1425500:intron | 20.0% |
!!! | GTATCTTTCTAGATTAATTT+TGG | + | tig0025858:62972-62991 | Msa1425500:intron | 20.0% |
!! | ATAACATCTAAAAAAAGACT+AGG | - | tig0025858:63156-63175 | Msa1425500:intergenic | 20.0% |
!! | TTCTAAATGAGTGAAAATAT+TGG | - | tig0025858:63241-63260 | Msa1425500:intergenic | 20.0% |
!!! | TTTTCATACATATCTTTTCT+AGG | + | tig0025858:63329-63348 | Msa1425500:intron | 20.0% |
!! | TTGAAATCAAATTTCAAAAC+TGG | - | tig0025858:63773-63792 | Msa1425500:intergenic | 20.0% |
!! | TAAATATACGAAGAGAAATA+CGG | - | tig0025858:63895-63914 | Msa1425500:intergenic | 20.0% |
!!! | TTTGCTATAATCTACATTTT+TGG | + | tig0025858:64105-64124 | Msa1425500:intron | 20.0% |
!!! | AAAATTTTGCAAAAGCAAAA+AGG | - | tig0025858:64196-64215 | Msa1425500:intergenic | 20.0% |
!!! | TGCTTCTTTTATTTGTTTTA+CGG | + | tig0025858:64302-64321 | Msa1425500:intron | 20.0% |
!!! | ATTTTTGTTTTTACTATTCC+TGG | + | tig0025858:64825-64844 | Msa1425500:intron | 20.0% |
!! | AAAAGAATGAATCACTATAA+AGG | - | tig0025858:65264-65283 | Msa1425500:intergenic | 20.0% |
!!! | AAAATAAACTTTTCACATGA+AGG | - | tig0025858:65412-65431 | Msa1425500:intergenic | 20.0% |
!! | GGAATAAAAAGTTGTATTTA+TGG | + | tig0025858:65476-65495 | Msa1425500:intron | 20.0% |
!!! | CGTTCTGTTTTTTTTTTAAC+AGG | + | tig0025858:58906-58925 | Msa1425500:intron | 25.0% |
! | AAAAAACAAAAACGTTGTTC+AGG | - | tig0025858:59308-59327 | Msa1425500:intergenic | 25.0% |
! | ATATTCCTTCTTTCATATCA+TGG | + | tig0025858:59639-59658 | Msa1425500:intron | 25.0% |
!! | GAGGACTATAACATTTTATA+GGG | - | tig0025858:59828-59847 | Msa1425500:intergenic | 25.0% |
!! | TGAGGACTATAACATTTTAT+AGG | - | tig0025858:59829-59848 | Msa1425500:intergenic | 25.0% |
! | ATAGCTAAAAAGAAACATTG+AGG | - | tig0025858:59847-59866 | Msa1425500:intergenic | 25.0% |
! | TATAGACAGTTGAGTAATAA+CGG | + | tig0025858:60097-60116 | Msa1425500:intron | 25.0% |
!! | GACATAACTCATAGTAATTT+TGG | + | tig0025858:60646-60665 | Msa1425500:intron | 25.0% |
! | AACTTCATTCTTGTTAACTA+CGG | + | tig0025858:61243-61262 | Msa1425500:CDS | 25.0% |
!! | GTTTTTGATGTGTTTATCAA+TGG | + | tig0025858:61582-61601 | Msa1425500:CDS | 25.0% |
!! | AGTTGATATTTACAAAGAAG+TGG | + | tig0025858:61620-61639 | Msa1425500:CDS | 25.0% |
! | GTTGATATTTACAAAGAAGT+GGG | + | tig0025858:61621-61640 | Msa1425500:CDS | 25.0% |
!! | ATTTGAGTAGTAATGTTTTG+GGG | + | tig0025858:61682-61701 | Msa1425500:CDS | 25.0% |
! | TGAATTACATTTCAGTAATG+AGG | - | tig0025858:62087-62106 | Msa1425500:intergenic | 25.0% |
!! | TACCATTTGATCATTTTATG+AGG | + | tig0025858:62234-62253 | Msa1425500:intron | 25.0% |
! | TTCCTCATAAAATGATCAAA+TGG | - | tig0025858:62239-62258 | Msa1425500:intergenic | 25.0% |
!! | ATTTGATCATTTTATGAGGA+AGG | + | tig0025858:62238-62257 | Msa1425500:intron | 25.0% |
! | AATGGTAGAATAGGTTTAAT+TGG | + | tig0025858:62354-62373 | Msa1425500:intron | 25.0% |
! | AGGTTTAATTGGTAGAAAAA+TGG | + | tig0025858:62365-62384 | Msa1425500:intron | 25.0% |
! | TTAATTGGTAGAAAAATGGA+CGG | + | tig0025858:62369-62388 | Msa1425500:intron | 25.0% |
!! | CATTTTCATTTCAGAAATCT+TGG | + | tig0025858:62491-62510 | Msa1425500:intron | 25.0% |
! | ATGCAAGATGTAAAGAAATT+AGG | - | tig0025858:62597-62616 | Msa1425500:intergenic | 25.0% |
!! | TAATTTTACCACATGTTTAG+TGG | + | tig0025858:62687-62706 | Msa1425500:intron | 25.0% |
!!! | AAAGCTGATCATTTTGAAAA+AGG | - | tig0025858:62768-62787 | Msa1425500:intergenic | 25.0% |
!!! | TTTTTCAAAATGATCAGCTT+TGG | + | tig0025858:62767-62786 | Msa1425500:intron | 25.0% |
! | GATAGAATAATGATGTACAA+TGG | + | tig0025858:62843-62862 | Msa1425500:intron | 25.0% |
! | CAATCATCATATACTGAATA+CGG | + | tig0025858:63278-63297 | Msa1425500:intron | 25.0% |
! | TTATCCAATAATCACTTAAC+CGG | + | tig0025858:63592-63611 | Msa1425500:CDS | 25.0% |
! | ATGATAACTCGACAATAAAA+AGG | + | tig0025858:63713-63732 | Msa1425500:intron | 25.0% |
! | CAAATTTCAAAACTGGATTA+CGG | - | tig0025858:63766-63785 | Msa1425500:intergenic | 25.0% |
! | ATTAACAAAACCAAATGACT+AGG | - | tig0025858:63805-63824 | Msa1425500:intergenic | 25.0% |
! | TTCGAAGAATTATGAAACTT+GGG | - | tig0025858:64141-64160 | Msa1425500:intergenic | 25.0% |
!!! | GCTTCTTTTATTTGTTTTAC+GGG | + | tig0025858:64303-64322 | Msa1425500:intron | 25.0% |
! | ATATCTACATCAGAAAGAAA+AGG | + | tig0025858:64722-64741 | Msa1425500:CDS | 25.0% |
! | TAAATATAAACCACATTACC+AGG | - | tig0025858:64846-64865 | Msa1425500:intergenic | 25.0% |
! | TTACTAATTGTTTGGTATCA+TGG | + | tig0025858:64934-64953 | Msa1425500:intron | 25.0% |
!! | TGTTTTGTACATATAGGATT+TGG | + | tig0025858:65047-65066 | Msa1425500:intron | 25.0% |
!! | GGAATTTGGTGAAATTTAAA+AGG | - | tig0025858:65438-65457 | Msa1425500:intergenic | 25.0% |
!! | TGCTAATTGTCAAGTTTTTA+TGG | + | tig0025858:65519-65538 | Msa1425500:intron | 25.0% |
! | TTCATTAAAACATGCTATAG+AGG | - | tig0025858:65655-65674 | Msa1425500:intergenic | 25.0% |
! | AATAATTCAATGTAAGCTTG+TGG | + | tig0025858:65733-65752 | Msa1425500:three_prime_UTR | 25.0% |
! | ACCTTTGATGAATGTATATT+AGG | + | tig0025858:65898-65917 | Msa1425500:three_prime_UTR | 25.0% |
! | TCCTAATATACATTCATCAA+AGG | - | tig0025858:65902-65921 | Msa1425500:intergenic | 25.0% |
!!! | TTTTTCAAGTTACATCAACT+TGG | + | tig0025858:65968-65987 | Msa1425500:three_prime_UTR | 25.0% |
! | TTCTTTATCATGCTTTACTT+GGG | - | tig0025858:66088-66107 | Msa1425500:intergenic | 25.0% |
! | TTTCTTTATCATGCTTTACT+TGG | - | tig0025858:66089-66108 | Msa1425500:intergenic | 25.0% |
! | ATGAGTATGTGTTAATGTTA+TGG | + | tig0025858:66138-66157 | Msa1425500:three_prime_UTR | 25.0% |
! | AATTTTCACCTTTCATGACA+TGG | - | tig0025858:58539-58558 | Msa1425500:intergenic | 30.0% |
CATTCTTAATAGCAAAGAGT+CGG | - | tig0025858:58811-58830 | Msa1425500:intergenic | 30.0% | |
!! | ACTCTTTGCTATTAAGAATG+TGG | + | tig0025858:58811-58830 | Msa1425500:intron | 30.0% |
!! | CTCTTTGCTATTAAGAATGT+GGG | + | tig0025858:58812-58831 | Msa1425500:intron | 30.0% |
! | TTTTAACAGGATTCTATGGT+CGG | + | tig0025858:58919-58938 | Msa1425500:intron | 30.0% |
! | TCAGAAGCTTCAAACTTTTT+CGG | + | tig0025858:59480-59499 | Msa1425500:intron | 30.0% |
ATCAACCATGATATGAAAGA+AGG | - | tig0025858:59647-59666 | Msa1425500:intergenic | 30.0% | |
! | TGCAATGCAATTTTTCACAA+TGG | + | tig0025858:59678-59697 | Msa1425500:intron | 30.0% |
! | CATTCTTGGGAGTAATTTTT+AGG | + | tig0025858:59934-59953 | Msa1425500:intron | 30.0% |
!! | AGAGGTTTGTTACATAAAGA+GGG | - | tig0025858:60375-60394 | Msa1425500:intergenic | 30.0% |
! | AACAAGAATGAAGTTTTCAC+CGG | - | tig0025858:61238-61257 | Msa1425500:intergenic | 30.0% |
ACCAACGATACTGATAAATT+CGG | + | tig0025858:61309-61328 | Msa1425500:CDS | 30.0% | |
AAAACTCTGACAATTTCTTC+CGG | - | tig0025858:61372-61391 | Msa1425500:intergenic | 30.0% | |
AGCTTCATCGGAAAATAATT+CGG | - | tig0025858:61432-61451 | Msa1425500:intergenic | 30.0% | |
GATTCAAGTGTGAAAAAAGA+AGG | + | tig0025858:61552-61571 | Msa1425500:CDS | 30.0% | |
TTCTCAATACCACAAATCAA+AGG | - | tig0025858:61735-61754 | Msa1425500:intergenic | 30.0% | |
! | TGGTATTGAGAATTATGCAT+TGG | + | tig0025858:61743-61762 | Msa1425500:CDS | 30.0% |
!!! | TTTTTTCTTTCTCGGATTGA+AGG | + | tig0025858:61821-61840 | Msa1425500:intron | 30.0% |
TGTGTGTGATTTATAGCTTA+TGG | + | tig0025858:61910-61929 | Msa1425500:intron | 30.0% | |
GTGTGTGATTTATAGCTTAT+GGG | + | tig0025858:61911-61930 | Msa1425500:intron | 30.0% | |
! | TTTTGTAGTAAGTGCTATGA+AGG | + | tig0025858:61940-61959 | Msa1425500:intron | 30.0% |
!! | CAGTTTTATCATCACTCATA+CGG | - | tig0025858:62060-62079 | Msa1425500:intergenic | 30.0% |
AGAGCAAAATAGCAGAAAAT+TGG | - | tig0025858:62116-62135 | Msa1425500:intergenic | 30.0% | |
CTTGGAACATGAAATGTTTA+TGG | - | tig0025858:62162-62181 | Msa1425500:intergenic | 30.0% | |
AAACATTTCATGTTCCAAGT+AGG | + | tig0025858:62163-62182 | Msa1425500:intron | 30.0% | |
TTAACCTTACACTTGACTAA+AGG | - | tig0025858:62336-62355 | Msa1425500:intergenic | 30.0% | |
TTAGTCAAGTGTAAGGTTAA+TGG | + | tig0025858:62336-62355 | Msa1425500:intron | 30.0% | |
TGTAAGGTTAATGGTAGAAT+AGG | + | tig0025858:62345-62364 | Msa1425500:intron | 30.0% | |
! | ACATTCGTTTGAAATCTTGT+CGG | + | tig0025858:62408-62427 | Msa1425500:intron | 30.0% |
TTTCCTTGCATAATGAACTT+CGG | + | tig0025858:62443-62462 | Msa1425500:intron | 30.0% | |
!!! | GATTAGTCTTTTGTCAGATT+TGG | + | tig0025858:62547-62566 | Msa1425500:CDS | 30.0% |
ATTAAAATCCTTGCAATTGC+TGG | - | tig0025858:62908-62927 | Msa1425500:intergenic | 30.0% | |
TGTTAAAGAACTCAATTGAG+TGG | + | tig0025858:63191-63210 | Msa1425500:intron | 30.0% | |
!! | TGACTTTGGAGTTTAAATTC+AGG | - | tig0025858:63364-63383 | Msa1425500:intergenic | 30.0% |
! | ACTATGAAGTGCTCAATAAA+TGG | + | tig0025858:63437-63456 | Msa1425500:intron | 30.0% |
! | CTATGAAGTGCTCAATAAAT+GGG | + | tig0025858:63438-63457 | Msa1425500:intron | 30.0% |
! | TATGAAGTGCTCAATAAATG+GGG | + | tig0025858:63439-63458 | Msa1425500:intron | 30.0% |
! | TTTCTCTGTAATGTTTCTGT+AGG | + | tig0025858:63566-63585 | Msa1425500:intron | 30.0% |
! | TTCTCTGTAATGTTTCTGTA+GGG | + | tig0025858:63567-63586 | Msa1425500:intron | 30.0% |
AATCATCTTTCCTAGTCATT+TGG | + | tig0025858:63792-63811 | Msa1425500:intron | 30.0% | |
! | TGTTGCCAATATATTTTTCC+TGG | + | tig0025858:63844-63863 | Msa1425500:intron | 30.0% |
CAGATCCAGGAAAAATATAT+TGG | - | tig0025858:63852-63871 | Msa1425500:intergenic | 30.0% | |
! | CAATATATTTTTCCTGGATC+TGG | + | tig0025858:63850-63869 | Msa1425500:intron | 30.0% |
CTTCGAAGAATTATGAAACT+TGG | - | tig0025858:64142-64161 | Msa1425500:intergenic | 30.0% | |
ATAATTCATGACAAACCTAC+CGG | + | tig0025858:64358-64377 | Msa1425500:intron | 30.0% | |
TTTATGCTGCACATTATCAA+AGG | + | tig0025858:64472-64491 | Msa1425500:intron | 30.0% | |
! | TATCATCATGTCCTATGTTT+TGG | + | tig0025858:64614-64633 | Msa1425500:CDS | 30.0% |
! | ATCATCATGTCCTATGTTTT+GGG | + | tig0025858:64615-64634 | Msa1425500:CDS | 30.0% |
AAAAGGAACGATTATGACTT+TGG | + | tig0025858:64739-64758 | Msa1425500:CDS | 30.0% | |
!! | TTTTACTATTCCTGGTAATG+TGG | + | tig0025858:64833-64852 | Msa1425500:intron | 30.0% |
ATGAAAAAACAGCTATTGCA+CGG | - | tig0025858:64915-64934 | Msa1425500:intergenic | 30.0% | |
! | TGAATCACTATAAAGGCATA+TGG | - | tig0025858:65257-65276 | Msa1425500:intergenic | 30.0% |
TAGTAATCATACCTTCATAG+TGG | + | tig0025858:65348-65367 | Msa1425500:intron | 30.0% | |
GACAATACAAGAATTATGTC+CGG | - | tig0025858:65390-65409 | Msa1425500:intergenic | 30.0% | |
CTAAAACTTCTTCAGGAATT+TGG | - | tig0025858:65452-65471 | Msa1425500:intergenic | 30.0% | |
!!! | TCCTGAAGAAGTTTTAGTTT+TGG | + | tig0025858:65455-65474 | Msa1425500:intron | 30.0% |
TCCAAAACTAAAACTTCTTC+AGG | - | tig0025858:65459-65478 | Msa1425500:intergenic | 30.0% | |
AAAGTTGTATTTATGGACCT+TGG | + | tig0025858:65483-65502 | Msa1425500:intron | 30.0% | |
AAAAACTTGACAATTAGCAC+AGG | - | tig0025858:65518-65537 | Msa1425500:intergenic | 30.0% | |
GTTGATGTAACTTGAAAAAC+CGG | - | tig0025858:65967-65986 | Msa1425500:intergenic | 30.0% | |
!! | CTTGAACATTTTAGTAGCAA+AGG | + | tig0025858:66189-66208 | Msa1425500:intron | 30.0% |
TGAAAATTCTCTCACACCTT+TGG | + | tig0025858:58551-58570 | Msa1425500:intron | 35.0% | |
ATGACAAATGACGTTGCAAA+TGG | + | tig0025858:58610-58629 | Msa1425500:intron | 35.0% | |
ATGACGTTGCAAATGGTATA+AGG | + | tig0025858:58617-58636 | Msa1425500:intron | 35.0% | |
TTGCAAATGGTATAAGGTGT+AGG | + | tig0025858:58623-58642 | Msa1425500:intron | 35.0% | |
TTATACGCTCTCAAGATGAA+CGG | - | tig0025858:58880-58899 | Msa1425500:intergenic | 35.0% | |
AACAAAAACGTTGTTCAGGA+TGG | - | tig0025858:59304-59323 | Msa1425500:intergenic | 35.0% | |
ACGTGTGTATTTGGATAACA+TGG | - | tig0025858:59398-59417 | Msa1425500:intergenic | 35.0% | |
TGTTGCTAAACGTGTGTATT+TGG | - | tig0025858:59407-59426 | Msa1425500:intergenic | 35.0% | |
TTGTGTAGCATAGTATAGTG+GGG | - | tig0025858:59450-59469 | Msa1425500:intergenic | 35.0% | |
GTTGTGTAGCATAGTATAGT+GGG | - | tig0025858:59451-59470 | Msa1425500:intergenic | 35.0% | |
TGTTGTGTAGCATAGTATAG+TGG | - | tig0025858:59452-59471 | Msa1425500:intergenic | 35.0% | |
ACAATGGTATGAGTTATCCT+TGG | + | tig0025858:59694-59713 | Msa1425500:intron | 35.0% | |
GAGATGATCAACTTTATCCA+AGG | - | tig0025858:59714-59733 | Msa1425500:intergenic | 35.0% | |
TTATCTATGCTCCTACACTT+TGG | + | tig0025858:59762-59781 | Msa1425500:intron | 35.0% | |
!! | GAGAGGTTTGTTACATAAAG+AGG | - | tig0025858:60376-60395 | Msa1425500:intergenic | 35.0% |
TAAGAAGGAGAGGAAGAAAT+GGG | - | tig0025858:60454-60473 | Msa1425500:intergenic | 35.0% | |
ATAAGAAGGAGAGGAAGAAA+TGG | - | tig0025858:60455-60474 | Msa1425500:intergenic | 35.0% | |
! | TGATGATGAATAAGAAGGAG+AGG | - | tig0025858:60464-60483 | Msa1425500:intergenic | 35.0% |
!! | ACCAAACATGCAAAAGTACT+CGG | - | tig0025858:60544-60563 | Msa1425500:intergenic | 35.0% |
!!! | TGAGTAGCAGTTTTTTTTGC+CGG | - | tig0025858:60917-60936 | Msa1425500:intergenic | 35.0% |
AGTTCGATTGATGAGATGAT+CGG | - | tig0025858:61177-61196 | Msa1425500:intergenic | 35.0% | |
!!! | GAAGTTTTGCTGCTTTTACT+TGG | + | tig0025858:61643-61662 | Msa1425500:CDS | 35.0% |
!! | ATTAAGCTTGTTGCTGTTTC+TGG | + | tig0025858:61705-61724 | Msa1425500:CDS | 35.0% |
AAGAGGAAAAACCTTGAAGA+GGG | - | tig0025858:61791-61810 | Msa1425500:intergenic | 35.0% | |
TAAGAGGAAAAACCTTGAAG+AGG | - | tig0025858:61792-61811 | Msa1425500:intergenic | 35.0% | |
TTATGTATTCAGCACCTACT+TGG | - | tig0025858:62180-62199 | Msa1425500:intergenic | 35.0% | |
AGCGTGTGTATATAATCATG+AGG | - | tig0025858:62308-62327 | Msa1425500:intergenic | 35.0% | |
TTCCTTGCATAATGAACTTC+GGG | + | tig0025858:62444-62463 | Msa1425500:intron | 35.0% | |
TTCAATACATCTAAACCGCA+CGG | - | tig0025858:62621-62640 | Msa1425500:intergenic | 35.0% | |
!!! | TGCTCAGTGTTTTAAGTTGA+GGG | - | tig0025858:62744-62763 | Msa1425500:intergenic | 35.0% |
!!! | ATGCTCAGTGTTTTAAGTTG+AGG | - | tig0025858:62745-62764 | Msa1425500:intergenic | 35.0% |
! | CTTTGGTACTTTCATTTTCG+TGG | + | tig0025858:62784-62803 | Msa1425500:intron | 35.0% |
TTCATTCCTCAAGTAAATGC+AGG | - | tig0025858:62876-62895 | Msa1425500:intergenic | 35.0% | |
!! | AATTTTGGTCATGTCCATAG+TGG | + | tig0025858:62987-63006 | Msa1425500:intron | 35.0% |
!! | ATTTTGGTCATGTCCATAGT+GGG | + | tig0025858:62988-63007 | Msa1425500:intron | 35.0% |
! | TTATATAACGGAACCCACTA+TGG | - | tig0025858:63004-63023 | Msa1425500:intergenic | 35.0% |
AAACTTGAGTTCGAATTCCT+TGG | + | tig0025858:63049-63068 | Msa1425500:CDS | 35.0% | |
AACTTGAGTTCGAATTCCTT+GGG | + | tig0025858:63050-63069 | Msa1425500:CDS | 35.0% | |
CTGATCTTACACTTGTATCA+GGG | - | tig0025858:63108-63127 | Msa1425500:intergenic | 35.0% | |
TCTGATCTTACACTTGTATC+AGG | - | tig0025858:63109-63128 | Msa1425500:intergenic | 35.0% | |
AACATGCATAAAAGAGACAC+AGG | - | tig0025858:63961-63980 | Msa1425500:intergenic | 35.0% | |
TTATAATGATTGTCTCTGCC+AGG | + | tig0025858:63995-64014 | Msa1425500:intron | 35.0% | |
ATAGGACATGATGATAGAGA+TGG | - | tig0025858:64610-64629 | Msa1425500:intergenic | 35.0% | |
!!! | ATGTCTTTTTGTTTTCTGCG+TGG | + | tig0025858:64684-64703 | Msa1425500:CDS | 35.0% |
GGTAAAACAAATGAAGCAAC+AGG | - | tig0025858:64894-64913 | Msa1425500:intergenic | 35.0% | |
CTAATTGTTTGGTATCATGG+TGG | + | tig0025858:64937-64956 | Msa1425500:intron | 35.0% | |
AGCATGCATGTTTGATATCA+CGG | - | tig0025858:65005-65024 | Msa1425500:intergenic | 35.0% | |
! | TATGTTTCCTGTACTGACAA+AGG | + | tig0025858:65091-65110 | Msa1425500:intron | 35.0% |
TATGTTCCATTATGTGCTCA+AGG | + | tig0025858:65204-65223 | Msa1425500:intron | 35.0% | |
TCAACTTCAAGATCTCAAAG+CGG | + | tig0025858:65309-65328 | Msa1425500:intron | 35.0% | |
TAATCATACCTTCATAGTGG+TGG | + | tig0025858:65351-65370 | Msa1425500:intron | 35.0% | |
! | CCTCTGATATTTGTTTCTCT+TGG | - | tig0025858:65566-65585 | Msa1425500:intergenic | 35.0% |
CCAAGAGAAACAAATATCAG+AGG | + | tig0025858:65563-65582 | Msa1425500:CDS | 35.0% | |
! | ATCATTGATGATTCTTGAGC+TGG | + | tig0025858:65591-65610 | Msa1425500:CDS | 35.0% |
ATAGAGGAGTAAAAGGTGAA+GGG | - | tig0025858:65639-65658 | Msa1425500:intergenic | 35.0% | |
TATAGAGGAGTAAAAGGTGA+AGG | - | tig0025858:65640-65659 | Msa1425500:intergenic | 35.0% | |
ACATGCTATAGAGGAGTAAA+AGG | - | tig0025858:65646-65665 | Msa1425500:intergenic | 35.0% | |
GAATGCTAGTGATATTACCA+CGG | - | tig0025858:65875-65894 | Msa1425500:intergenic | 35.0% | |
!! | AGCAAAGGCTTTAAGCTATA+TGG | + | tig0025858:66204-66223 | Msa1425500:three_prime_UTR | 35.0% |
GTAACACAGTTGTAGCAATA+CGG | - | tig0025858:66244-66263 | Msa1425500:intergenic | 35.0% | |
GTAGGTAATTGCTGAAAGTG+AGG | + | tig0025858:58641-58660 | Msa1425500:intron | 40.0% | |
AATTGCTGAAAGTGAGGTGA+AGG | + | tig0025858:58647-58666 | Msa1425500:intron | 40.0% | |
AGTGAGGTGAAGGCAATTTA+CGG | + | tig0025858:58657-58676 | Msa1425500:intron | 40.0% | |
ATTTACGGGTGAAGGAGATT+TGG | + | tig0025858:58672-58691 | Msa1425500:intron | 40.0% | |
TTTACGGGTGAAGGAGATTT+GGG | + | tig0025858:58673-58692 | Msa1425500:intron | 40.0% | |
! | ATTTGGGTATGGTGGAGATT+TGG | + | tig0025858:58689-58708 | Msa1425500:intron | 40.0% |
! | TTTGGGTATGGTGGAGATTT+GGG | + | tig0025858:58690-58709 | Msa1425500:intron | 40.0% |
AAAGCAAATAGTGGTTCCAG+AGG | + | tig0025858:58734-58753 | Msa1425500:intron | 40.0% | |
GAAGAGAAGTTCTTCGTTTC+CGG | - | tig0025858:58777-58796 | Msa1425500:intergenic | 40.0% | |
CAAAGAGTCGGACGAAAAAA+GGG | - | tig0025858:58799-58818 | Msa1425500:intergenic | 40.0% | |
CTCTCAAGATGAACGGTTAA+GGG | - | tig0025858:58873-58892 | Msa1425500:intergenic | 40.0% | |
! | GTGTTGCATGTTGATGAGTT+GGG | + | tig0025858:59354-59373 | Msa1425500:intron | 40.0% |
AGTTGGGTAGCATAAGTAGT+GGG | + | tig0025858:59370-59389 | Msa1425500:intron | 40.0% | |
TGTGTAGCATAGTATAGTGG+GGG | - | tig0025858:59449-59468 | Msa1425500:intergenic | 40.0% | |
TCCTACACTTTGGCAAGAAT+CGG | + | tig0025858:59772-59791 | Msa1425500:intron | 40.0% | |
GTATGTCCACACACGAAAAA+AGG | - | tig0025858:59800-59819 | Msa1425500:intergenic | 40.0% | |
TATGCCTTTAGCACAATAGC+AGG | + | tig0025858:59883-59902 | Msa1425500:intron | 40.0% | |
TTCACCTGCTATTGTGCTAA+AGG | - | tig0025858:59890-59909 | Msa1425500:intergenic | 40.0% | |
GTGCAAAGTCTGTCTTAAAC+AGG | - | tig0025858:60042-60061 | Msa1425500:intergenic | 40.0% | |
CTAGCATGAGCTAAGTTTGT+AGG | + | tig0025858:60074-60093 | Msa1425500:intron | 40.0% | |
TGTGTGTGTATTGTACGAAG+AGG | - | tig0025858:60345-60364 | Msa1425500:intergenic | 40.0% | |
GAAAAAAGTGAGAGTGAGAG+AGG | - | tig0025858:60393-60412 | Msa1425500:intergenic | 40.0% | |
AAGAAGGAGAGGAAGAAATG+GGG | - | tig0025858:60453-60472 | Msa1425500:intergenic | 40.0% | |
! | GGTGGTGATGATGAATAAGA+AGG | - | tig0025858:60469-60488 | Msa1425500:intergenic | 40.0% |
AGTTACCAGAGGGAAAAGAT+GGG | - | tig0025858:60515-60534 | Msa1425500:intergenic | 40.0% | |
TAGTTACCAGAGGGAAAAGA+TGG | - | tig0025858:60516-60535 | Msa1425500:intergenic | 40.0% | |
! | ACCGAGTACTTTTGCATGTT+TGG | + | tig0025858:60540-60559 | Msa1425500:intron | 40.0% |
TCCTCATACCACATTAACTG+CGG | + | tig0025858:60745-60764 | Msa1425500:CDS | 40.0% | |
!!! | AAGCGGAGAGTTTTTTCTGA+GGG | - | tig0025858:60877-60896 | Msa1425500:intergenic | 40.0% |
AGAACGCCAGTTGAAAATGA+TGG | - | tig0025858:61046-61065 | Msa1425500:intergenic | 40.0% | |
TCATACGAAGCGGAATTTAC+AGG | - | tig0025858:61204-61223 | Msa1425500:intergenic | 40.0% | |
GGAGTTAGAATCATACGAAG+CGG | - | tig0025858:61214-61233 | Msa1425500:intergenic | 40.0% | |
TCGTATGATTCTAACTCCAC+CGG | + | tig0025858:61216-61235 | Msa1425500:CDS | 40.0% | |
! | AAGAATGAAGTTTTCACCGG+TGG | - | tig0025858:61235-61254 | Msa1425500:intergenic | 40.0% |
AACTACGGTAGAGTTTCATG+CGG | + | tig0025858:61258-61277 | Msa1425500:CDS | 40.0% | |
GCCGAATTTATCAGTATCGT+TGG | - | tig0025858:61313-61332 | Msa1425500:intergenic | 40.0% | |
ACGATACTGATAAATTCGGC+CGG | + | tig0025858:61313-61332 | Msa1425500:CDS | 40.0% | |
TCTGACAATTTCTTCCGGTT+CGG | - | tig0025858:61367-61386 | Msa1425500:intergenic | 40.0% | |
! | CTCCTTTTCAGTACCATTCA+CGG | - | tig0025858:61409-61428 | Msa1425500:intergenic | 40.0% |
TCCGATGAAGCTTTACCAAA+CGG | + | tig0025858:61440-61459 | Msa1425500:CDS | 40.0% | |
!! | AAGTGCTATGAAGGCATTGA+AGG | + | tig0025858:61949-61968 | Msa1425500:CDS | 40.0% |
TTTATCATCACTCATACGGC+AGG | - | tig0025858:62056-62075 | Msa1425500:intergenic | 40.0% | |
TTGGTAGAAAAATGGACGGA+TGG | + | tig0025858:62373-62392 | Msa1425500:intron | 40.0% | |
TAGAAAAATGGACGGATGGA+TGG | + | tig0025858:62377-62396 | Msa1425500:intron | 40.0% | |
TACCCGAAGTTCATTATGCA+AGG | - | tig0025858:62449-62468 | Msa1425500:intergenic | 40.0% | |
TTCAGAAATCTTGGCAGTCA+AGG | + | tig0025858:62500-62519 | Msa1425500:intron | 40.0% | |
TTGGCAGTCAAGGCTTAAAA+GGG | + | tig0025858:62510-62529 | Msa1425500:CDS | 40.0% | |
TTTACATCTTGCATACCGTG+CGG | + | tig0025858:62603-62622 | Msa1425500:intron | 40.0% | |
! | CTAGAGTACCACTAAACATG+TGG | - | tig0025858:62698-62717 | Msa1425500:intergenic | 40.0% |
TGCTGCACACAATTCAGAAA+AGG | - | tig0025858:62951-62970 | Msa1425500:intergenic | 40.0% | |
ACTTGAGTTCGAATTCCTTG+GGG | + | tig0025858:63051-63070 | Msa1425500:CDS | 40.0% | |
GAGCACTTCATAGTTGTGTT+GGG | - | tig0025858:63431-63450 | Msa1425500:intergenic | 40.0% | |
TGAGCACTTCATAGTTGTGT+TGG | - | tig0025858:63432-63451 | Msa1425500:intergenic | 40.0% | |
AGAGCCGGTTAAGTGATTAT+TGG | - | tig0025858:63599-63618 | Msa1425500:intergenic | 40.0% | |
TACGAAGAGAAATACGGTTG+CGG | - | tig0025858:63889-63908 | Msa1425500:intergenic | 40.0% | |
TAGGTTACCATTCAATAGCC+TGG | - | tig0025858:64016-64035 | Msa1425500:intergenic | 40.0% | |
GCTATTGAATGGTAACCTAC+TGG | + | tig0025858:64017-64036 | Msa1425500:CDS | 40.0% | |
TTGAATGGTAACCTACTGGA+AGG | + | tig0025858:64021-64040 | Msa1425500:CDS | 40.0% | |
CCAACAGAATAAAGTTGCTC+TGG | - | tig0025858:64054-64073 | Msa1425500:intergenic | 40.0% | |
CCAGAGCAACTTTATTCTGT+TGG | + | tig0025858:64051-64070 | Msa1425500:CDS | 40.0% | |
GATAACTACTTTAGCCACAG+TGG | + | tig0025858:64273-64292 | Msa1425500:intron | 40.0% | |
!! | GACAATTTTAGCCAGAGCAT+CGG | - | tig0025858:64391-64410 | Msa1425500:intergenic | 40.0% |
ATTCAGTCTCTCAAGCAACA+AGG | + | tig0025858:64570-64589 | Msa1425500:intron | 40.0% | |
TTCAGTCTCTCAAGCAACAA+GGG | + | tig0025858:64571-64590 | Msa1425500:intron | 40.0% | |
TACTCACCCATTACTTCATG+GGG | - | tig0025858:64769-64788 | Msa1425500:intergenic | 40.0% | |
GTACTCACCCATTACTTCAT+GGG | - | tig0025858:64770-64789 | Msa1425500:intergenic | 40.0% | |
TGTACTCACCCATTACTTCA+TGG | - | tig0025858:64771-64790 | Msa1425500:intergenic | 40.0% | |
!! | CATGGTGGATTTCAGAATCA+CGG | + | tig0025858:64952-64971 | Msa1425500:intron | 40.0% |
TGCATGTTTGATATCACGGT+GGG | - | tig0025858:65001-65020 | Msa1425500:intergenic | 40.0% | |
ATGCATGTTTGATATCACGG+TGG | - | tig0025858:65002-65021 | Msa1425500:intergenic | 40.0% | |
GTCTTCAATGTTCATGCCAA+AGG | - | tig0025858:65122-65141 | Msa1425500:intergenic | 40.0% | |
CAACTTCAAGATCTCAAAGC+GGG | + | tig0025858:65310-65329 | Msa1425500:intron | 40.0% | |
AAAAGGTGAAGGGAATCCTT+TGG | - | tig0025858:65629-65648 | Msa1425500:intergenic | 40.0% | |
! | AATGCTGCTTCATCACAATG+AGG | + | tig0025858:65783-65802 | Msa1425500:three_prime_UTR | 40.0% |
TGCGCATTTGACGATGATTT+CGG | + | tig0025858:65829-65848 | Msa1425500:three_prime_UTR | 40.0% | |
ATTTCGGACCATCGTATAAG+AGG | + | tig0025858:65845-65864 | Msa1425500:three_prime_UTR | 40.0% | |
TTCACCTTTCATGACATGGC+TGG | - | tig0025858:58535-58554 | Msa1425500:intergenic | 45.0% | |
!! | CACCTTTGGAACACAAAGAG+TGG | + | tig0025858:58565-58584 | Msa1425500:intron | 45.0% |
GACCACTCTTTGTGTTCCAA+AGG | - | tig0025858:58570-58589 | Msa1425500:intergenic | 45.0% | |
GTGAGGTGAAGGCAATTTAC+GGG | + | tig0025858:58658-58677 | Msa1425500:intron | 45.0% | |
TGAAGGCAATTTACGGGTGA+AGG | + | tig0025858:58664-58683 | Msa1425500:intron | 45.0% | |
TGAAGGAGATTTGGGTATGG+TGG | + | tig0025858:58681-58700 | Msa1425500:intron | 45.0% | |
ATTTGGGAGTGAAGGGGATT+TGG | + | tig0025858:58706-58725 | Msa1425500:intron | 45.0% | |
TTTGGGAGTGAAGGGGATTT+GGG | + | tig0025858:58707-58726 | Msa1425500:intron | 45.0% | |
TTGGGGGTGAAAGCAAATAG+TGG | + | tig0025858:58725-58744 | Msa1425500:intron | 45.0% | |
TCTCATGTAGCTGAATCCTC+TGG | - | tig0025858:58753-58772 | Msa1425500:intergenic | 45.0% | |
GGATTCAGCTACATGAGAAC+CGG | + | tig0025858:58755-58774 | Msa1425500:intron | 45.0% | |
GCAAAGAGTCGGACGAAAAA+AGG | - | tig0025858:58800-58819 | Msa1425500:intergenic | 45.0% | |
CAAGATGAACGGTTAAGGGT+CGG | - | tig0025858:58869-58888 | Msa1425500:intergenic | 45.0% | |
GCTCTCAAGATGAACGGTTA+AGG | - | tig0025858:58874-58893 | Msa1425500:intergenic | 45.0% | |
GGGTGATCTTGTAGTTCCTA+CGG | + | tig0025858:58974-58993 | Msa1425500:intron | 45.0% | |
GGTGATCTTGTAGTTCCTAC+GGG | + | tig0025858:58975-58994 | Msa1425500:intron | 45.0% | |
GTGATCTTGTAGTTCCTACG+GGG | + | tig0025858:58976-58995 | Msa1425500:intron | 45.0% | |
! | GGTGTTGCATGTTGATGAGT+TGG | + | tig0025858:59353-59372 | Msa1425500:intron | 45.0% |
GAGTTGGGTAGCATAAGTAG+TGG | + | tig0025858:59369-59388 | Msa1425500:intron | 45.0% | |
GTTACCAGAGGGAAAAGATG+GGG | - | tig0025858:60514-60533 | Msa1425500:intergenic | 45.0% | |
TCGGTAGAGTAGTTACCAGA+GGG | - | tig0025858:60525-60544 | Msa1425500:intergenic | 45.0% | |
!! | TTGAAGTGCCGCAGTTAATG+TGG | - | tig0025858:60756-60775 | Msa1425500:intergenic | 45.0% |
AGAGCCATGTTGTGTTGAAG+GGG | - | tig0025858:60792-60811 | Msa1425500:intergenic | 45.0% | |
GAGAGCCATGTTGTGTTGAA+GGG | - | tig0025858:60793-60812 | Msa1425500:intergenic | 45.0% | |
! | TTTCTGAGGGGAGGTTGAAA+CGG | - | tig0025858:60864-60883 | Msa1425500:intergenic | 45.0% |
!!! | AGCGGAGAGTTTTTTCTGAG+GGG | - | tig0025858:60876-60895 | Msa1425500:intergenic | 45.0% |
!!! | GAAGCGGAGAGTTTTTTCTG+AGG | - | tig0025858:60878-60897 | Msa1425500:intergenic | 45.0% |
!!! | GTAGCAGTTTTTTTTGCCGG+AGG | - | tig0025858:60914-60933 | Msa1425500:intergenic | 45.0% |
TAGCGAGAAGAAGGAAGTGA+GGG | - | tig0025858:60943-60962 | Msa1425500:intergenic | 45.0% | |
!! | CCAGTTGAAAATGATGGTGG+AGG | - | tig0025858:61040-61059 | Msa1425500:intergenic | 45.0% |
! | CCTCCACCATCATTTTCAAC+TGG | + | tig0025858:61037-61056 | Msa1425500:CDS | 45.0% |
ACGCCAGTTGAAAATGATGG+TGG | - | tig0025858:61043-61062 | Msa1425500:intergenic | 45.0% | |
! | TTTTCAACTGGCGTTCTCCA+TGG | + | tig0025858:61049-61068 | Msa1425500:CDS | 45.0% |
TGATGAGATGATCGGAGCAT+CGG | - | tig0025858:61169-61188 | Msa1425500:intergenic | 45.0% | |
! | ATCAGTATCGTTGGTGAAGC+CGG | - | tig0025858:61304-61323 | Msa1425500:intergenic | 45.0% |
!! | CAATTTCTTCCGGTTCGGTT+CGG | - | tig0025858:61362-61381 | Msa1425500:intergenic | 45.0% |
TCAACAGAGAACACCGTGAA+TGG | + | tig0025858:61393-61412 | Msa1425500:CDS | 45.0% | |
! | CACCGTGAATGGTACTGAAA+AGG | + | tig0025858:61404-61423 | Msa1425500:CDS | 45.0% |
GCCGTTTGGTAAAGCTTCAT+CGG | - | tig0025858:61444-61463 | Msa1425500:intergenic | 45.0% | |
GATGAAGCTTTACCAAACGG+CGG | + | tig0025858:61443-61462 | Msa1425500:CDS | 45.0% | |
GTTGGAGTACGAATTGAGTG+TGG | + | tig0025858:61485-61504 | Msa1425500:CDS | 45.0% | |
ATTGAGTGTGGATGCGAAGA+TGG | + | tig0025858:61497-61516 | Msa1425500:CDS | 45.0% | |
!! | GGATGCGAAGATGGACTATA+TGG | + | tig0025858:61506-61525 | Msa1425500:CDS | 45.0% |
!! | CGAAGATGGACTATATGGTG+TGG | + | tig0025858:61511-61530 | Msa1425500:CDS | 45.0% |
!! | TCTGGTGCTCCTTTGATTTG+TGG | + | tig0025858:61723-61742 | Msa1425500:CDS | 45.0% |
AAAACCTTGAAGAGGGTGAG+TGG | - | tig0025858:61784-61803 | Msa1425500:intergenic | 45.0% | |
! | CTTCGAGTTCCAGGTAGAAT+GGG | + | tig0025858:61977-61996 | Msa1425500:CDS | 45.0% |
TCCTACAACTTGGGATGCTT+GGG | + | tig0025858:62021-62040 | Msa1425500:CDS | 45.0% | |
CCTTACACTTGACTAAAGGC+AGG | - | tig0025858:62332-62351 | Msa1425500:intergenic | 45.0% | |
CCTGCCTTTAGTCAAGTGTA+AGG | + | tig0025858:62329-62348 | Msa1425500:intron | 45.0% | |
AAAATGGACGGATGGATGGT+TGG | + | tig0025858:62381-62400 | Msa1425500:intron | 45.0% | |
CTTGGCAGTCAAGGCTTAAA+AGG | + | tig0025858:62509-62528 | Msa1425500:CDS | 45.0% | |
GGCAGCTGATCATACTTACA+GGG | - | tig0025858:62576-62595 | Msa1425500:intergenic | 45.0% | |
AGGCAGCTGATCATACTTAC+AGG | - | tig0025858:62577-62596 | Msa1425500:intergenic | 45.0% | |
ACCTCACCTGCATTTACTTG+AGG | + | tig0025858:62867-62886 | Msa1425500:intron | 45.0% | |
TCCTCAAGTAAATGCAGGTG+AGG | - | tig0025858:62871-62890 | Msa1425500:intergenic | 45.0% | |
AGAACACTCCAGCAATTGCA+AGG | + | tig0025858:62897-62916 | Msa1425500:intron | 45.0% | |
CTTGAGTTCGAATTCCTTGG+GGG | + | tig0025858:63052-63071 | Msa1425500:CDS | 45.0% | |
TTGAGTTCGAATTCCTTGGG+GGG | + | tig0025858:63053-63072 | Msa1425500:CDS | 45.0% | |
GGTGAAATACCATCAGGACT+GGG | + | tig0025858:63074-63093 | Msa1425500:CDS | 45.0% | |
! | GATTTTTGACCCAGTCCTGA+TGG | - | tig0025858:63086-63105 | Msa1425500:intergenic | 45.0% |
CAAACTGTCAGGTATAGAGC+CGG | - | tig0025858:63614-63633 | Msa1425500:intergenic | 45.0% | |
GTTGAAGATGCCAAACTGTC+AGG | - | tig0025858:63625-63644 | Msa1425500:intergenic | 45.0% | |
! | TACGGTAAAAGAAAAGCGCG+CGG | - | tig0025858:63748-63767 | Msa1425500:intergenic | 45.0% |
GCATAAAAGAGACACAGGTG+AGG | - | tig0025858:63956-63975 | Msa1425500:intergenic | 45.0% | |
CTTTATTCTGTTGGCGTGCA+CGG | + | tig0025858:64060-64079 | Msa1425500:CDS | 45.0% | |
AAGAAGCAGCATAACCACTG+TGG | - | tig0025858:64290-64309 | Msa1425500:intergenic | 45.0% | |
TCAAGCAACAAGGGTTTGTG+TGG | + | tig0025858:64580-64599 | Msa1425500:CDS | 45.0% | |
!!! | TGTCCTATGTTTTGGGAGCA+AGG | + | tig0025858:64622-64641 | Msa1425500:CDS | 45.0% |
TGGTCTACCCCATGAAGTAA+TGG | + | tig0025858:64759-64778 | Msa1425500:CDS | 45.0% | |
GGTCTACCCCATGAAGTAAT+GGG | + | tig0025858:64760-64779 | Msa1425500:CDS | 45.0% | |
! | TCTGTTGCTGACTATGCTGT+TGG | + | tig0025858:64868-64887 | Msa1425500:intron | 45.0% |
TGGGTTTGTCAAAATCACGG+TGG | - | tig0025858:64982-65001 | Msa1425500:intergenic | 45.0% | |
! | CGGTGGGTTTGTCAAAATCA+CGG | - | tig0025858:64985-65004 | Msa1425500:intergenic | 45.0% |
ACTGACAAAGGAACTGCCTT+TGG | + | tig0025858:65103-65122 | Msa1425500:intron | 45.0% | |
GTTCCATTATGTGCTCAAGG+TGG | + | tig0025858:65207-65226 | Msa1425500:intron | 45.0% | |
TTGCCACCTTGAGCACATAA+TGG | - | tig0025858:65213-65232 | Msa1425500:intergenic | 45.0% | |
TTCAAGATCTCAAAGCGGGT+TGG | + | tig0025858:65314-65333 | Msa1425500:intron | 45.0% | |
TGTGCAAACCACCACTATGA+AGG | - | tig0025858:65362-65381 | Msa1425500:intergenic | 45.0% | |
AGCACAGGCTTCAATATCCA+AGG | - | tig0025858:65503-65522 | Msa1425500:intergenic | 45.0% | |
CACTAAACTCGCAGCTGAAA+TGG | - | tig0025858:65943-65962 | Msa1425500:intergenic | 45.0% | |
GGGTGAAGGAGATTTGGGTA+TGG | + | tig0025858:58678-58697 | Msa1425500:intron | 50.0% | |
TGGTGGAGATTTGGGAGTGA+AGG | + | tig0025858:58698-58717 | Msa1425500:intron | 50.0% | |
GGTGGAGATTTGGGAGTGAA+GGG | + | tig0025858:58699-58718 | Msa1425500:intron | 50.0% | |
GTGGAGATTTGGGAGTGAAG+GGG | + | tig0025858:58700-58719 | Msa1425500:intron | 50.0% | |
TTGGGAGTGAAGGGGATTTG+GGG | + | tig0025858:58708-58727 | Msa1425500:intron | 50.0% | |
GGAACTACAAGATCACCCCA+AGG | - | tig0025858:58972-58991 | Msa1425500:intergenic | 50.0% | |
ATCTTGTAGTTCCTACGGGG+TGG | + | tig0025858:58979-58998 | Msa1425500:intron | 50.0% | |
GTCGGTCCATGGATAACAGT+GGG | + | tig0025858:59012-59031 | Msa1425500:intron | 50.0% | |
TCGGTCCATGGATAACAGTG+GGG | + | tig0025858:59013-59032 | Msa1425500:intron | 50.0% | |
! | GCCGATTCTTGCCAAAGTGT+AGG | - | tig0025858:59776-59795 | Msa1425500:intergenic | 50.0% |
!!! | TCGGCACCTTTTTTCGTGTG+TGG | + | tig0025858:59791-59810 | Msa1425500:intron | 50.0% |
TACGAAGAGGCGAGATTAGC+GGG | - | tig0025858:60332-60351 | Msa1425500:intergenic | 50.0% | |
GTACGAAGAGGCGAGATTAG+CGG | - | tig0025858:60333-60352 | Msa1425500:intergenic | 50.0% | |
AAAAGATGGGGTTGGAGTGG+AGG | - | tig0025858:60502-60521 | Msa1425500:intergenic | 50.0% | |
CTCGGTAGAGTAGTTACCAG+AGG | - | tig0025858:60526-60545 | Msa1425500:intergenic | 50.0% | |
GCCGCAGTTAATGTGGTATG+AGG | - | tig0025858:60749-60768 | Msa1425500:intergenic | 50.0% | |
CAGACCCCTTCAACACAACA+TGG | + | tig0025858:60785-60804 | Msa1425500:CDS | 50.0% | |
GGAGAGCCATGTTGTGTTGA+AGG | - | tig0025858:60794-60813 | Msa1425500:intergenic | 50.0% | |
!!! | GGAGAGTTTTTTCTGAGGGG+AGG | - | tig0025858:60873-60892 | Msa1425500:intergenic | 50.0% |
!!! | GTTTTTTTTGCCGGAGGAGG+AGG | - | tig0025858:60908-60927 | Msa1425500:intergenic | 50.0% |
!!! | GCAGTTTTTTTTGCCGGAGG+AGG | - | tig0025858:60911-60930 | Msa1425500:intergenic | 50.0% |
AGCGAGAAGAAGGAAGTGAG+GGG | - | tig0025858:60942-60961 | Msa1425500:intergenic | 50.0% | |
GTAGCGAGAAGAAGGAAGTG+AGG | - | tig0025858:60944-60963 | Msa1425500:intergenic | 50.0% | |
GTAGTTGTCGTAGACGGTGA+AGG | - | tig0025858:60977-60996 | Msa1425500:intergenic | 50.0% | |
TGCGTCGTAGTTGTCGTAGA+CGG | - | tig0025858:60983-61002 | Msa1425500:intergenic | 50.0% | |
GTAGAAGCAAAGATCAGCGG+CGG | - | tig0025858:61136-61155 | Msa1425500:intergenic | 50.0% | |
GCCGCTGATCTTTGCTTCTA+CGG | + | tig0025858:61135-61154 | Msa1425500:CDS | 50.0% | |
GCCGTAGAAGCAAAGATCAG+CGG | - | tig0025858:61139-61158 | Msa1425500:intergenic | 50.0% | |
CTGATAAATTCGGCCGGTCA+TGG | + | tig0025858:61319-61338 | Msa1425500:CDS | 50.0% | |
!! | TCGGTTCGGAATGCTTCATC+CGG | - | tig0025858:61348-61367 | Msa1425500:intergenic | 50.0% |
! | TGAAGCATTCCGAACCGAAC+CGG | + | tig0025858:61350-61369 | Msa1425500:CDS | 50.0% |
TATGGTGTGGCTGCATTTCG+CGG | + | tig0025858:61524-61543 | Msa1425500:CDS | 50.0% | |
TGTCTAGTGCCTGACATGTG+TGG | + | tig0025858:61846-61865 | Msa1425500:intron | 50.0% | |
TCCACTGATCCACACATGTC+AGG | - | tig0025858:61858-61877 | Msa1425500:intergenic | 50.0% | |
! | AAGGAATCGCTTCGAGTTCC+AGG | + | tig0025858:61968-61987 | Msa1425500:CDS | 50.0% |
! | GCTTCGAGTTCCAGGTAGAA+TGG | + | tig0025858:61976-61995 | Msa1425500:CDS | 50.0% |
GAGTTCCAGGTAGAATGGGA+TGG | + | tig0025858:61981-62000 | Msa1425500:CDS | 50.0% | |
CCATTCCATCCCATTCTACC+TGG | - | tig0025858:61989-62008 | Msa1425500:intergenic | 50.0% | |
CCAGGTAGAATGGGATGGAA+TGG | + | tig0025858:61986-62005 | Msa1425500:CDS | 50.0% | |
ATCCCTGTGCTCCTACAACT+TGG | + | tig0025858:62011-62030 | Msa1425500:CDS | 50.0% | |
TCCCTGTGCTCCTACAACTT+GGG | + | tig0025858:62012-62031 | Msa1425500:CDS | 50.0% | |
! | TCCCAAGTTGTAGGAGCACA+GGG | - | tig0025858:62016-62035 | Msa1425500:intergenic | 50.0% |
! | ATCCCAAGTTGTAGGAGCAC+AGG | - | tig0025858:62017-62036 | Msa1425500:intergenic | 50.0% |
CTCCTACAACTTGGGATGCT+TGG | + | tig0025858:62020-62039 | Msa1425500:CDS | 50.0% | |
TCCCAAGCATCCCAAGTTGT+AGG | - | tig0025858:62025-62044 | Msa1425500:intergenic | 50.0% | |
ACAACTTGGGATGCTTGGGA+AGG | + | tig0025858:62025-62044 | Msa1425500:CDS | 50.0% | |
TGATGGTATTTCACCCCCCA+AGG | - | tig0025858:63069-63088 | Msa1425500:intergenic | 50.0% | |
TTGGGGGGTGAAATACCATC+AGG | + | tig0025858:63068-63087 | Msa1425500:CDS | 50.0% | |
GGGTGAAATACCATCAGGAC+TGG | + | tig0025858:63073-63092 | Msa1425500:CDS | 50.0% | |
CGGCTCTATACCTGACAGTT+TGG | + | tig0025858:63612-63631 | Msa1425500:CDS | 50.0% | |
GTCTCTGCCAGGCTATTGAA+TGG | + | tig0025858:64006-64025 | Msa1425500:intron | 50.0% | |
!!! | CCTATGTTTTGGGAGCAAGG+CGG | + | tig0025858:64625-64644 | Msa1425500:CDS | 50.0% |
!! | AGCAAGGCGGATTATCGACT+CGG | + | tig0025858:64638-64657 | Msa1425500:CDS | 50.0% |
GGCAGTTCCTTTGTCAGTAC+AGG | - | tig0025858:65101-65120 | Msa1425500:intergenic | 50.0% | |
! | TGGTGGTTTGCACATAGCTC+CGG | + | tig0025858:65368-65387 | Msa1425500:intron | 50.0% |
AGCAGCATTGCATTGCGTCA+AGG | - | tig0025858:65772-65791 | Msa1425500:intergenic | 50.0% | |
ACGGCATGCCTCTTATACGA+TGG | - | tig0025858:65856-65875 | Msa1425500:intergenic | 50.0% | |
! | ATCGTATAAGAGGCATGCCG+TGG | + | tig0025858:65855-65874 | Msa1425500:three_prime_UTR | 50.0% |
TCAGCTGCGAGTTTAGTGTC+CGG | + | tig0025858:65945-65964 | Msa1425500:three_prime_UTR | 50.0% | |
GAGGCCAGCCATGTCATGAA+AGG | + | tig0025858:58528-58547 | Msa1425500:CDS | 55.0% | |
TGGGAGTGAAGGGGATTTGG+GGG | + | tig0025858:58709-58728 | Msa1425500:intron | 55.0% | |
TTCCTACGGGGTGGAGATGA+TGG | + | tig0025858:58988-59007 | Msa1425500:intron | 55.0% | |
TCCTACGGGGTGGAGATGAT+GGG | + | tig0025858:58989-59008 | Msa1425500:intron | 55.0% | |
GGTCGGTCCATGGATAACAG+TGG | + | tig0025858:59011-59030 | Msa1425500:intron | 55.0% | |
CGGTCCATGGATAACAGTGG+GGG | + | tig0025858:59014-59033 | Msa1425500:intron | 55.0% | |
GGTCCATGGATAACAGTGGG+GGG | + | tig0025858:59015-59034 | Msa1425500:intron | 55.0% | |
GTCCATGGATAACAGTGGGG+GGG | + | tig0025858:59016-59035 | Msa1425500:intron | 55.0% | |
TCCATGGATAACAGTGGGGG+GGG | + | tig0025858:59017-59036 | Msa1425500:intron | 55.0% | |
GGGAAAAGATGGGGTTGGAG+TGG | - | tig0025858:60505-60524 | Msa1425500:intergenic | 55.0% | |
CCAGAGGGAAAAGATGGGGT+TGG | - | tig0025858:60510-60529 | Msa1425500:intergenic | 55.0% | |
! | CCAACCCCATCTTTTCCCTC+TGG | + | tig0025858:60507-60526 | Msa1425500:intron | 55.0% |
CTCTCCGACCGTTACTACAC+CGG | + | tig0025858:60808-60827 | Msa1425500:CDS | 55.0% | |
AGGAGGAGGAAGGGAAGAAG+CGG | - | tig0025858:60894-60913 | Msa1425500:intergenic | 55.0% | |
TTCTTCCCTTCCTCCTCCTC+CGG | + | tig0025858:60895-60914 | Msa1425500:CDS | 55.0% | |
! | TTTTGCCGGAGGAGGAGGAA+GGG | - | tig0025858:60903-60922 | Msa1425500:intergenic | 55.0% |
! | TTTTTGCCGGAGGAGGAGGA+AGG | - | tig0025858:60904-60923 | Msa1425500:intergenic | 55.0% |
TGTCGTAGACGGTGAAGGTG+CGG | - | tig0025858:60972-60991 | Msa1425500:intergenic | 55.0% | |
AGTGCAACGTCGAAGGAAGG+AGG | - | tig0025858:61015-61034 | Msa1425500:intergenic | 55.0% | |
! | GAGAGTGCAACGTCGAAGGA+AGG | - | tig0025858:61018-61037 | Msa1425500:intergenic | 55.0% |
AAGCAAAGATCAGCGGCGGA+GGG | - | tig0025858:61132-61151 | Msa1425500:intergenic | 55.0% | |
GGTAGAGTTTCATGCGGCTC+CGG | + | tig0025858:61264-61283 | Msa1425500:CDS | 55.0% | |
ATGCGGCTCCGGTGATCATT+GGG | + | tig0025858:61275-61294 | Msa1425500:CDS | 55.0% | |
TTACCAAACGGCGGTGACGA+CGG | + | tig0025858:61452-61471 | Msa1425500:CDS | 55.0% | |
CCTTGAAGAGGGTGAGTGGA+AGG | - | tig0025858:61780-61799 | Msa1425500:intergenic | 55.0% | |
CCTTCCACTCACCCTCTTCA+AGG | + | tig0025858:61777-61796 | Msa1425500:CDS | 55.0% | |
GCCTGACATGTGTGGATCAG+TGG | + | tig0025858:61854-61873 | Msa1425500:intron | 55.0% | |
AGTGAGACAACGCCAGATCC+AGG | - | tig0025858:63865-63884 | Msa1425500:intergenic | 55.0% | |
GTGAGGCTGCACTAAAGGTC+GGG | - | tig0025858:63939-63958 | Msa1425500:intergenic | 55.0% | |
GGTGAGGCTGCACTAAAGGT+CGG | - | tig0025858:63940-63959 | Msa1425500:intergenic | 55.0% | |
CACAGGTGAGGCTGCACTAA+AGG | - | tig0025858:63944-63963 | Msa1425500:intergenic | 55.0% | |
TATTCTGTTGGCGTGCACGG+TGG | + | tig0025858:64063-64082 | Msa1425500:CDS | 55.0% | |
!! | AGCATCGGTGCAAAACCGGT+AGG | - | tig0025858:64376-64395 | Msa1425500:intergenic | 55.0% |
!! | CCAGAGCATCGGTGCAAAAC+CGG | - | tig0025858:64380-64399 | Msa1425500:intergenic | 55.0% |
CCGCCTTGCTCCCAAAACAT+AGG | - | tig0025858:64628-64647 | Msa1425500:intergenic | 55.0% | |
!! | GCAAGGCGGATTATCGACTC+GGG | + | tig0025858:64639-64658 | Msa1425500:CDS | 55.0% |
!! | CAAGGCGGATTATCGACTCG+GGG | + | tig0025858:64640-64659 | Msa1425500:CDS | 55.0% |
TTTCTGCGTGGTACTGCTGC+TGG | + | tig0025858:64696-64715 | Msa1425500:CDS | 55.0% | |
CTGGAGAGTCAACACGCCAA+AGG | + | tig0025858:65610-65629 | Msa1425500:CDS | 55.0% | |
CATTGCGTCAAGGTCGAGCA+GGG | - | tig0025858:65762-65781 | Msa1425500:intergenic | 55.0% | |
GTGGTCGTGAAGCACGTCGA+AGG | + | tig0025858:58584-58603 | Msa1425500:intron | 60.0% | |
TATGGTCGGTCCACAACCCC+TGG | + | tig0025858:58933-58952 | Msa1425500:intron | 60.0% | |
AAGGACGCCTTCGGCATCCA+GGG | - | tig0025858:58953-58972 | Msa1425500:intergenic | 60.0% | |
!! | TGGATGCCGAAGGCGTCCTT+GGG | + | tig0025858:58953-58972 | Msa1425500:intron | 60.0% |
GATCACCCCAAGGACGCCTT+CGG | - | tig0025858:58962-58981 | Msa1425500:intergenic | 60.0% | |
CCTACGGGGTGGAGATGATG+GGG | + | tig0025858:58990-59009 | Msa1425500:intron | 60.0% | |
!! | GAGATGATGGGGTCGGTCCA+TGG | + | tig0025858:59001-59020 | Msa1425500:intron | 60.0% |
CCATGGATAACAGTGGGGGG+GGG | + | tig0025858:59018-59037 | Msa1425500:intron | 60.0% | |
CATGGATAACAGTGGGGGGG+GGG | + | tig0025858:59019-59038 | Msa1425500:intron | 60.0% | |
ATGGATAACAGTGGGGGGGG+GGG | + | tig0025858:59020-59039 | Msa1425500:intron | 60.0% | |
! | AGTGGAGGTGGAGATGGTGG+TGG | - | tig0025858:60487-60506 | Msa1425500:intergenic | 60.0% |
TGGAGTGGAGGTGGAGATGG+TGG | - | tig0025858:60490-60509 | Msa1425500:intergenic | 60.0% | |
GGTTGGAGTGGAGGTGGAGA+TGG | - | tig0025858:60493-60512 | Msa1425500:intergenic | 60.0% | |
AGATGGGGTTGGAGTGGAGG+TGG | - | tig0025858:60499-60518 | Msa1425500:intergenic | 60.0% | |
TCCGACCGTTACTACACCGG+CGG | + | tig0025858:60811-60830 | Msa1425500:CDS | 60.0% | |
GAAACGGAGTGGCTCCGAGA+CGG | - | tig0025858:60848-60867 | Msa1425500:intergenic | 60.0% | |
GAGGGGAGGTTGAAACGGAG+TGG | - | tig0025858:60859-60878 | Msa1425500:intergenic | 60.0% | |
CGGAGGAGGTAGCGAGAAGA+AGG | - | tig0025858:60952-60971 | Msa1425500:intergenic | 60.0% | |
! | GGAGGAGAGTGCAACGTCGA+AGG | - | tig0025858:61022-61041 | Msa1425500:intergenic | 60.0% |
GAAGCAAAGATCAGCGGCGG+AGG | - | tig0025858:61133-61152 | Msa1425500:intergenic | 60.0% | |
CATGCGGCTCCGGTGATCAT+TGG | + | tig0025858:61274-61293 | Msa1425500:CDS | 60.0% | |
TGCGGCTCCGGTGATCATTG+GGG | + | tig0025858:61276-61295 | Msa1425500:CDS | 60.0% | |
CTTCATCCGGCTGCCATGAC+CGG | - | tig0025858:61335-61354 | Msa1425500:intergenic | 60.0% | |
CTGGCACTCGTCCTTCCAGT+AGG | - | tig0025858:64035-64054 | Msa1425500:intergenic | 60.0% | |
!! | CCGGTTTTGCACCGATGCTC+TGG | + | tig0025858:64377-64396 | Msa1425500:intron | 60.0% |
GCATTGCGTCAAGGTCGAGC+AGG | - | tig0025858:65763-65782 | Msa1425500:intergenic | 60.0% | |
GGAGGCAGTGGATGCAGAGG+AGG | + | tig0025858:58509-58528 | Msa1425500:CDS | 65.0% | |
CCTTCGGCATCCAGGGGTTG+TGG | - | tig0025858:58946-58965 | Msa1425500:intergenic | 65.0% | |
CCACAACCCCTGGATGCCGA+AGG | + | tig0025858:58943-58962 | Msa1425500:intron | 65.0% | |
AGGACGCCTTCGGCATCCAG+GGG | - | tig0025858:58952-58971 | Msa1425500:intergenic | 65.0% | |
CAAGGACGCCTTCGGCATCC+AGG | - | tig0025858:58954-58973 | Msa1425500:intergenic | 65.0% | |
!! | CTGGATGCCGAAGGCGTCCT+TGG | + | tig0025858:58952-58971 | Msa1425500:intron | 65.0% |
!! | GGATGCCGAAGGCGTCCTTG+GGG | + | tig0025858:58954-58973 | Msa1425500:intron | 65.0% |
CCCCATCATCTCCACCCCGT+AGG | - | tig0025858:58993-59012 | Msa1425500:intergenic | 65.0% | |
!! | CGGGGTGGAGATGATGGGGT+CGG | + | tig0025858:58994-59013 | Msa1425500:intron | 65.0% |
CCCCCCCCCACTGTTATCCA+TGG | - | tig0025858:59021-59040 | Msa1425500:intergenic | 65.0% | |
TGGATAACAGTGGGGGGGGG+GGG | + | tig0025858:59021-59040 | Msa1425500:intron | 65.0% | |
GCCGCCGGTGTAGTAACGGT+CGG | - | tig0025858:60815-60834 | Msa1425500:intergenic | 65.0% | |
TGGCGCCGCCGGTGTAGTAA+CGG | - | tig0025858:60819-60838 | Msa1425500:intergenic | 65.0% | |
! | AGACGGTGAAGGTGCGGAGG+AGG | - | tig0025858:60966-60985 | Msa1425500:intergenic | 65.0% |
! | CGTAGACGGTGAAGGTGCGG+AGG | - | tig0025858:60969-60988 | Msa1425500:intergenic | 65.0% |
! | CGTGCGGTGGATTCAGGCCA+TGG | - | tig0025858:61069-61088 | Msa1425500:intergenic | 65.0% |
CCTGAATCCACCGCACGCGA+CGG | + | tig0025858:61072-61091 | Msa1425500:CDS | 65.0% | |
! | AGCATAAGCGCCGTCGCGTG+CGG | - | tig0025858:61085-61104 | Msa1425500:intergenic | 65.0% |
TCCGGTGATCATTGGGGCGC+CGG | + | tig0025858:61282-61301 | Msa1425500:CDS | 65.0% | |
ATTCGGCCGGTCATGGCAGC+CGG | + | tig0025858:61326-61345 | Msa1425500:CDS | 65.0% | |
GACGACGGAGGAGGAGACGT+TGG | + | tig0025858:61467-61486 | Msa1425500:CDS | 65.0% | |
GGATAACAGTGGGGGGGGGG+GGG | + | tig0025858:59022-59041 | Msa1425500:intron | 70.0% | |
GATAACAGTGGGGGGGGGGG+GGG | + | tig0025858:59023-59042 | Msa1425500:intron | 70.0% | |
ATAACAGTGGGGGGGGGGGG+GGG | + | tig0025858:59024-59043 | Msa1425500:intron | 70.0% | |
! | TGGCTCCGAGACGGTGGTGG+TGG | - | tig0025858:60839-60858 | Msa1425500:intergenic | 70.0% |
GAGTGGCTCCGAGACGGTGG+TGG | - | tig0025858:60842-60861 | Msa1425500:intergenic | 70.0% | |
ACGGAGTGGCTCCGAGACGG+TGG | - | tig0025858:60845-60864 | Msa1425500:intergenic | 70.0% | |
! | CCGTCGCGTGCGGTGGATTC+AGG | - | tig0025858:61075-61094 | Msa1425500:intergenic | 70.0% |
! | ATAAGCGCCGTCGCGTGCGG+TGG | - | tig0025858:61082-61101 | Msa1425500:intergenic | 70.0% |
GCCGGCGCCCCAATGATCAC+CGG | - | tig0025858:61286-61305 | Msa1425500:intergenic | 70.0% | |
CCTCCGTCGTCACCGCCGTT+TGG | - | tig0025858:61458-61477 | Msa1425500:intergenic | 70.0% | |
CCAAACGGCGGTGACGACGG+AGG | + | tig0025858:61455-61474 | Msa1425500:CDS | 70.0% | |
AACGGCGGTGACGACGGAGG+AGG | + | tig0025858:61458-61477 | Msa1425500:CDS | 70.0% | |
TAACAGTGGGGGGGGGGGGG+GGG | + | tig0025858:59025-59044 | Msa1425500:intron | 75.0% | |
CGGCGCCACCACCACCGTCT+CGG | + | tig0025858:60831-60850 | Msa1425500:CDS | 75.0% | |
! | AACAGTGGGGGGGGGGGGGG+GGG | + | tig0025858:59026-59045 | Msa1425500:intron | 80.0% |
!!! | GACGGTGGTGGTGGCGCCGC+CGG | - | tig0025858:60830-60849 | Msa1425500:intergenic | 80.0% |
! | ACAGTGGGGGGGGGGGGGGG+GGG | + | tig0025858:59027-59046 | Msa1425500:intron | 85.0% |
! | CAGTGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59028-59047 | Msa1425500:intron | 90.0% |
! | AGTGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59029-59048 | Msa1425500:intron | 90.0% |
! | GTGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59030-59049 | Msa1425500:intron | 95.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | + | tig0025858:59031-59050 | Msa1425500:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0025858 | gene | 58507 | 66270 | 58507 | ID=Msa1425500;Name=Msa1425500 |
tig0025858 | mRNA | 58507 | 66270 | 58507 | ID=Msa1425500-mRNA-1;Parent=Msa1425500;Name=Msa1425500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.88|0.9|0.9|0.88|0.8|10|577|618 |
tig0025858 | exon | 58507 | 58549 | 58507 | ID=Msa1425500-mRNA-1:exon:4319;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 60737 | 61798 | 60737 | ID=Msa1425500-mRNA-1:exon:4320;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 61948 | 62098 | 61948 | ID=Msa1425500-mRNA-1:exon:4321;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 62505 | 62576 | 62505 | ID=Msa1425500-mRNA-1:exon:4322;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 63049 | 63117 | 63049 | ID=Msa1425500-mRNA-1:exon:4323;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 63588 | 63656 | 63588 | ID=Msa1425500-mRNA-1:exon:4324;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 64017 | 64094 | 64017 | ID=Msa1425500-mRNA-1:exon:4325;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 64576 | 64781 | 64576 | ID=Msa1425500-mRNA-1:exon:4326;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 65554 | 66169 | 65554 | ID=Msa1425500-mRNA-1:exon:4327;Parent=Msa1425500-mRNA-1 |
tig0025858 | exon | 66203 | 66270 | 66203 | ID=Msa1425500-mRNA-1:exon:4328;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 58507 | 58549 | 58507 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 60737 | 61798 | 60737 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 61948 | 62098 | 61948 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 62505 | 62576 | 62505 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 63049 | 63117 | 63049 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 63588 | 63656 | 63588 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 64017 | 64094 | 64017 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 64576 | 64781 | 64576 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | CDS | 65554 | 65660 | 65554 | ID=Msa1425500-mRNA-1:cds;Parent=Msa1425500-mRNA-1 |
tig0025858 | three_prime_UTR | 65661 | 66169 | 65661 | ID=Msa1425500-mRNA-1:three_prime_utr;Parent=Msa1425500-mRNA-1 |
tig0025858 | three_prime_UTR | 66203 | 66270 | 66203 | ID=Msa1425500-mRNA-1:three_prime_utr;Parent=Msa1425500-mRNA-1 |
Gene Sequence |
Protein sequence |