AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1441630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441630 MtrunA17_Chr1g0202341 87.704 675 45 3 4 640 12 686 0.0 1219
Msa1441630 MtrunA17_Chr5g0448761 37.834 637 342 11 36 623 53 684 6.98e-141 429
Msa1441630 MtrunA17_Chr1g0207551 32.330 631 378 8 41 632 32 652 2.11e-105 337
Msa1441630 MtrunA17_Chr2g0296781 34.965 572 304 12 47 565 1 557 1.18e-102 328
Msa1441630 MtrunA17_Chr5g0441581 31.343 603 351 11 9 566 1 585 2.79e-102 326
Msa1441630 MtrunA17_Chr2g0329031 31.782 623 362 10 42 622 13 614 4.98e-100 321
Msa1441630 MtrunA17_Chr5g0440451 31.685 647 358 11 42 627 42 665 7.20e-99 323
Msa1441630 MtrunA17_Chr3g0080351 31.155 658 372 11 16 619 43 673 8.62e-99 321
Msa1441630 MtrunA17_Chr2g0287061 32.855 627 327 15 41 623 181 757 1.64e-95 311
Msa1441630 MtrunA17_Chr2g0324011 30.821 597 360 9 37 588 4 592 7.55e-94 301
Msa1441630 MtrunA17_Chr2g0291581 28.912 671 408 11 5 627 34 683 2.01e-92 300
Msa1441630 MtrunA17_Chr5g0448511 34.273 461 265 4 204 627 1 460 7.17e-91 292
Msa1441630 MtrunA17_Chr8g0363841 30.682 616 353 14 27 589 5 599 1.38e-89 292
Msa1441630 MtrunA17_Chr3g0082121 30.308 617 382 9 26 605 26 631 2.46e-87 287
Msa1441630 MtrunA17_Chr6g0477261 35.455 440 236 7 172 565 9 446 3.88e-87 285
Msa1441630 MtrunA17_Chr3g0118611 33.691 466 264 5 203 627 101 562 4.18e-86 285
Msa1441630 MtrunA17_Chr1g0203721 28.889 630 402 8 46 631 66 693 6.37e-86 287
Msa1441630 MtrunA17_Chr1g0196541 30.810 568 333 10 47 565 1 557 4.09e-84 279
Msa1441630 MtrunA17_Chr2g0291591 32.914 477 303 7 42 512 63 528 5.35e-84 274
Msa1441630 MtrunA17_Chr2g0287651 29.577 568 350 9 42 566 74 634 6.67e-84 281
Msa1441630 MtrunA17_Chr1g0203051 30.505 495 326 8 24 512 63 545 2.83e-82 272
Msa1441630 MtrunA17_Chr6g0458391 28.793 580 348 9 25 564 211 765 8.56e-79 265
Msa1441630 MtrunA17_Chr6g0458391 31.288 163 96 5 23 177 76 230 6.92e-13 72.0
Msa1441630 MtrunA17_Chr1g0198761 27.911 627 387 14 45 617 49 664 1.33e-70 243
Msa1441630 MtrunA17_Chr1g0164591 37.171 304 180 3 134 435 14 308 1.92e-63 213
Msa1441630 MtrunA17_Chr2g0276841 29.114 474 318 8 43 504 70 537 1.38e-62 220
Msa1441630 MtrunA17_Chr5g0431001 30.110 455 295 10 19 454 33 483 4.77e-58 203
Msa1441630 MtrunA17_Chr7g0258861 37.063 286 173 5 42 322 9 292 1.63e-56 193
Msa1441630 MtrunA17_Chr2g0294841 25.741 641 410 15 19 601 14 646 1.67e-55 201
Msa1441630 MtrunA17_Chr2g0290391 28.348 575 345 15 41 561 49 610 8.39e-54 196
Msa1441630 MtrunA17_Chr4g0052331 55.789 95 42 0 1 95 1 95 2.80e-28 108
Msa1441630 MtrunA17_Chr3g0077241 60.870 92 32 2 6 96 1 89 8.96e-28 108
Msa1441630 MtrunA17_Chr2g0329361 44.954 109 59 1 41 148 59 167 2.65e-24 102
Msa1441630 MtrunA17_Chr2g0329421 38.596 114 58 3 42 150 26 132 5.99e-19 85.9
Msa1441630 MtrunA17_Chr4g0033611 33.582 134 77 3 17 145 50 176 6.42e-18 84.0
Msa1441630 MtrunA17_Chr1g0149131 32.727 110 74 0 321 430 1 110 2.58e-16 75.5
Msa1441630 MtrunA17_Chr3g0078041 32.738 168 107 5 7 170 12 177 7.94e-16 77.4
Msa1441630 MtrunA17_Chr2g0308841 27.820 133 95 1 381 512 6 138 3.69e-13 70.1
Msa1441630 MtrunA17_Chr7g0233911 32.812 128 82 3 42 168 33 157 5.28e-13 68.6
Msa1441630 MtrunA17_Chr6g0451441 26.794 209 139 6 3 208 50 247 8.78e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441630 AT4G38180.1 37.959 627 345 10 41 625 71 695 2.81e-139 426
Msa1441630 AT4G15090.1 33.387 617 361 10 41 616 49 656 4.11e-113 358
Msa1441630 AT4G15090.5 33.387 617 361 10 41 616 49 656 4.11e-113 358
Msa1441630 AT4G15090.3 33.387 617 361 10 41 616 49 656 4.11e-113 358
Msa1441630 AT4G15090.2 33.387 617 361 10 41 616 49 656 4.11e-113 358
Msa1441630 AT4G15090.4 33.387 617 361 10 41 616 49 656 4.11e-113 358
Msa1441630 AT5G18960.2 35.231 562 282 13 42 564 210 728 3.79e-104 334
Msa1441630 AT5G18960.2 32.075 106 56 2 41 145 41 131 2.09e-12 70.9
Msa1441630 AT5G18960.1 35.231 562 282 13 42 564 210 728 3.79e-104 334
Msa1441630 AT5G18960.1 32.075 106 56 2 41 145 41 131 2.09e-12 70.9
Msa1441630 AT3G06250.2 33.857 573 293 12 32 564 178 704 9.10e-103 330
Msa1441630 AT3G06250.2 32.456 114 61 2 33 145 18 116 2.97e-13 73.6
Msa1441630 AT3G06250.1 33.857 573 293 12 32 564 178 704 9.10e-103 330
Msa1441630 AT3G06250.1 32.456 114 61 2 33 145 18 116 2.97e-13 73.6
Msa1441630 AT3G06250.3 33.857 573 293 12 32 564 178 704 9.10e-103 330
Msa1441630 AT3G06250.3 32.456 114 61 2 33 145 18 116 2.97e-13 73.6
Msa1441630 AT2G27110.2 30.979 623 360 11 42 626 48 638 5.62e-100 324
Msa1441630 AT2G27110.1 30.979 623 360 11 42 626 48 638 5.62e-100 324
Msa1441630 AT3G22170.2 29.841 630 365 11 41 621 68 669 9.92e-100 323
Msa1441630 AT3G22170.1 29.841 630 365 11 41 621 68 669 9.92e-100 323
Msa1441630 AT2G27110.3 34.000 450 253 6 215 626 50 493 4.06e-88 289
Msa1441630 AT1G76320.3 30.000 620 367 10 47 622 1 597 7.52e-88 288
Msa1441630 AT1G76320.2 30.195 616 371 11 47 622 1 597 2.82e-87 288
Msa1441630 AT1G76320.1 30.195 616 371 11 47 622 1 597 3.06e-87 288
Msa1441630 AT1G76320.4 30.195 616 371 11 47 622 1 597 3.06e-87 288
Msa1441630 AT1G52520.1 28.031 635 387 12 43 627 85 699 1.59e-85 282
Msa1441630 AT2G32250.5 30.125 561 310 9 46 567 41 558 3.26e-79 267
Msa1441630 AT4G19990.5 28.459 636 360 10 41 622 19 613 9.15e-79 265
Msa1441630 AT4G19990.3 28.459 636 360 10 41 622 19 613 9.51e-79 265
Msa1441630 AT4G19990.4 28.459 636 360 10 41 622 19 613 9.51e-79 265
Msa1441630 AT4G38170.1 31.900 442 257 4 220 623 21 456 1.01e-78 260
Msa1441630 AT2G32250.2 30.125 561 310 9 46 567 41 558 1.09e-78 266
Msa1441630 AT2G32250.4 30.125 561 310 9 46 567 41 558 1.09e-78 266
Msa1441630 AT2G32250.6 30.125 561 310 9 46 567 41 558 1.30e-78 266
Msa1441630 AT2G32250.1 30.125 561 310 9 46 567 41 558 1.30e-78 266
Msa1441630 AT2G32250.3 30.125 561 310 9 46 567 41 558 1.30e-78 266
Msa1441630 AT4G19990.7 27.879 660 381 10 17 622 9 627 1.59e-78 265
Msa1441630 AT4G19990.6 28.459 636 360 10 41 622 19 613 2.50e-78 265
Msa1441630 AT4G19990.2 28.459 636 360 10 41 622 19 613 2.50e-78 265
Msa1441630 AT2G32250.7 29.821 560 311 9 47 567 1 517 6.12e-78 263
Msa1441630 AT2G32250.8 29.821 560 311 9 47 567 1 517 6.96e-78 263
Msa1441630 AT1G80010.1 27.356 658 378 16 39 626 93 720 1.28e-77 262
Msa1441630 AT4G19990.1 28.295 569 327 9 94 622 29 556 7.44e-70 240
Msa1441630 AT1G10240.2 28.053 524 343 13 6 504 1 515 1.55e-60 214
Msa1441630 AT1G10240.1 28.053 524 343 13 6 504 1 515 1.55e-60 214
Msa1441630 AT5G28530.1 25.515 631 405 12 43 618 55 675 5.97e-57 204
Msa1441630 AT5G28530.3 25.158 632 402 13 43 618 55 671 8.53e-56 201
Msa1441630 AT5G28530.2 25.158 632 402 13 43 618 55 671 8.53e-56 201
Msa1441630 AT5G28530.4 23.497 366 239 3 289 618 252 612 4.22e-29 123
Msa1441630 AT5G28530.5 22.951 366 237 3 289 618 252 608 3.70e-28 120
Msa1441630 AT3G59470.3 38.053 113 58 3 42 149 69 174 2.73e-18 85.5
Msa1441630 AT3G59470.1 38.053 113 58 3 42 149 69 174 2.73e-18 85.5
Msa1441630 AT3G59470.2 38.053 113 58 3 42 149 81 186 3.62e-18 85.5
Msa1441630 AT3G07500.1 36.036 111 68 2 37 146 27 135 1.25e-14 73.9
Msa1441630 AT4G12850.4 34.286 105 63 2 42 145 10 109 2.13e-13 68.2
Msa1441630 AT2G43280.1 34.959 123 77 3 32 152 11 132 2.16e-13 70.1
Msa1441630 AT4G12850.2 34.286 105 63 2 42 145 10 109 8.79e-13 66.6
Msa1441630 AT4G12850.1 34.286 105 63 2 42 145 10 109 1.69e-12 67.0

Find 91 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGCGGTATTGATAATTT+TGG 0.195979 tig0029332:+27455 Msa1441630:CDS
GAAAATTAACTAATTGCTTT+TGG 0.203998 tig0029332:+27627 Msa1441630:CDS
CATTCCTTCAATGGGCTCTA+AGG 0.236305 tig0029332:-27015 None:intergenic
TGATGATTAACTCCAGTAAT+TGG 0.238736 tig0029332:-27746 None:intergenic
AGAGTTGCTTACAAATATTT+TGG 0.269630 tig0029332:+27665 Msa1441630:CDS
AATTGTCAGTTGAAGAATAC+TGG 0.271394 tig0029332:+27572 Msa1441630:CDS
CGAAGAGACTGTGCACTTCT+AGG 0.276999 tig0029332:-27338 None:intergenic
AACTGTGTTCCTAAAGAAAA+AGG 0.312218 tig0029332:+28623 Msa1441630:CDS
TATACTCAATTCGATCAAAA+TGG 0.317025 tig0029332:+28137 Msa1441630:CDS
CAATATGCCACATGCAATAA+TGG 0.325491 tig0029332:-27946 None:intergenic
TTCATTGTTTAATAGTGTTA+TGG 0.327096 tig0029332:+28761 Msa1441630:CDS
ATTCTTCAATTGTGATAGAT+TGG 0.351090 tig0029332:-28048 None:intergenic
ACTGATGTGCTTGATGAATC+TGG 0.354525 tig0029332:+27398 Msa1441630:CDS
GAGAAAACAGCTGGTGATTA+TGG 0.357013 tig0029332:-27316 None:intergenic
TTTAAACTCCATTCCTTCAA+TGG 0.364249 tig0029332:-27024 None:intergenic
AGAACAAACGGTATGATAAT+TGG 0.370543 tig0029332:+27131 Msa1441630:CDS
TAGTGTTATGGTTCGTTCAC+TGG 0.382958 tig0029332:+28773 Msa1441630:CDS
ATTCCTTCAATGGGCTCTAA+GGG 0.384475 tig0029332:-27014 None:intergenic
CAATAATGGTGATTAACCTT+TGG 0.392421 tig0029332:-27932 None:intergenic
TTGAAGAATTTGAGTCTGAA+TGG 0.400537 tig0029332:+28062 Msa1441630:CDS
AGTAATTGATAACATCTTGT+TGG 0.416145 tig0029332:-27484 None:intergenic
TTAAACTCCATTCCTTCAAT+GGG 0.435121 tig0029332:-27023 None:intergenic
GTGCTTGATGAATCTGGTTT+AGG 0.447135 tig0029332:+27404 Msa1441630:CDS
TTGACAATTGAAGAATTTGA+AGG 0.456352 tig0029332:+28717 Msa1441630:CDS
CTTGGTTAGAAGCAATGAAT+GGG 0.462263 tig0029332:+27843 Msa1441630:CDS
TTGTTTGGTTGCTAAGTACT+TGG 0.462493 tig0029332:+27825 Msa1441630:CDS
TGAAGAATTTGAGTCTGAAT+GGG 0.463681 tig0029332:+28063 Msa1441630:CDS
TCCTTCAATGGGCTCTAAGG+GGG 0.466966 tig0029332:-27012 None:intergenic
TAGATCTGATTCATGTGCTC+TGG 0.470489 tig0029332:-27980 None:intergenic
CTGGAATGTCTACCACTCAT+AGG 0.472850 tig0029332:+28191 Msa1441630:CDS
TTTGGCTCGAAACCCCTCCT+TGG 0.475441 tig0029332:-27171 None:intergenic
ACTCCAGTAATTGGAACAAA+AGG 0.475504 tig0029332:-27737 None:intergenic
TTTGAAGCTTCTTCTTCCAT+GGG 0.477189 tig0029332:-28376 None:intergenic
ACTGTTTGCGTTATTATGGC+AGG 0.480651 tig0029332:+26882 None:intergenic
TTATTGCATGTGGCATATTG+AGG 0.485948 tig0029332:+27949 Msa1441630:CDS
ACTTGGTTAGAAGCAATGAA+TGG 0.491300 tig0029332:+27842 Msa1441630:CDS
CACATGAATCAGATCTATCA+TGG 0.493856 tig0029332:+27986 Msa1441630:CDS
GAAGCAATGATTGATAAATA+CGG 0.502447 tig0029332:+28085 Msa1441630:CDS
AAATTATGATGTACATATGC+AGG 0.504291 tig0029332:-28163 None:intergenic
GGGTATAAAGTTCGCAAAAG+TGG 0.509142 tig0029332:-28355 None:intergenic
TCAAGAAATTCTTTGTTCCA+AGG 0.511520 tig0029332:+27154 Msa1441630:CDS
CCTTCAATGGGCTCTAAGGG+GGG 0.511902 tig0029332:-27011 None:intergenic
AAGCAATGATTGATAAATAC+GGG 0.513517 tig0029332:+28086 Msa1441630:CDS
CACAGTATGTTCTACAACGA+TGG 0.518628 tig0029332:+28661 Msa1441630:CDS
TGTGTCAGAAACTTGCTCAA+TGG 0.523310 tig0029332:-28262 None:intergenic
CTTAGAGCCCATTGAAGGAA+TGG 0.526994 tig0029332:+27016 Msa1441630:CDS
ACAATTGAAGAATTTGAAGG+AGG 0.530417 tig0029332:+28720 Msa1441630:CDS
CACTTCTAGGAGAAAACAGC+TGG 0.530595 tig0029332:-27325 None:intergenic
TGAGATATTTCAAGATGAGT+TGG 0.531340 tig0029332:+28419 Msa1441630:CDS
GTTACTAAGTCAAGAACAAA+CGG 0.531428 tig0029332:+27119 Msa1441630:CDS
AAATTCTTTGTTCCAAGGAG+GGG 0.533751 tig0029332:+27159 Msa1441630:CDS
AGGTCATGAGATGACAGATA+TGG 0.541561 tig0029332:+26902 Msa1441630:CDS
GATGGTGGTTCACTATTGAG+AGG 0.542446 tig0029332:-26984 None:intergenic
ATATTTCAAGATGAGTTGGT+TGG 0.542621 tig0029332:+28423 Msa1441630:CDS
ATTGTCAGTTGAAGAATACT+GGG 0.543680 tig0029332:+27573 Msa1441630:CDS
CTATCACCAATGCAGTTGCA+AGG 0.546795 tig0029332:+27903 Msa1441630:CDS
GAAATTCTTTGTTCCAAGGA+GGG 0.547884 tig0029332:+27158 Msa1441630:CDS
TGCACGTTACAACGAGGAAA+GGG 0.548977 tig0029332:+28303 Msa1441630:CDS
TGAAACCAGGGTGGGATGCA+AGG 0.555494 tig0029332:+27235 Msa1441630:CDS
AAACACCCTTGCAACTGCAT+TGG 0.561204 tig0029332:-27909 None:intergenic
TCTGTCTTATGCACTGAAAG+TGG 0.562246 tig0029332:+27437 Msa1441630:CDS
TTCCTTCAATGGGCTCTAAG+GGG 0.577393 tig0029332:-27013 None:intergenic
TTAATCACCATTATTGCATG+TGG 0.578974 tig0029332:+27939 Msa1441630:CDS
CCGTGCCTTGCATCCCACCC+TGG 0.580963 tig0029332:-27240 None:intergenic
TTTGCGAACTTTATACCCCA+TGG 0.583317 tig0029332:+28360 Msa1441630:CDS
AGTTGCAAGGGTGTTTCCAA+AGG 0.585018 tig0029332:+27916 Msa1441630:CDS
ATGCACGTTACAACGAGGAA+AGG 0.585794 tig0029332:+28302 Msa1441630:CDS
CGTTGTAGAACATACTGTGA+AGG 0.588365 tig0029332:-28657 None:intergenic
CATGAGATGACAGATATGGA+TGG 0.601625 tig0029332:+26906 Msa1441630:CDS
AGAAATTCTTTGTTCCAAGG+AGG 0.606491 tig0029332:+27157 Msa1441630:CDS
TTGAAGCTTCTTCTTCCATG+GGG 0.606500 tig0029332:-28375 None:intergenic
CATTGGTGATAGCAGTGTGT+TGG 0.606939 tig0029332:-27892 None:intergenic
GTTGTAGAACATACTGTGAA+GGG 0.621697 tig0029332:-28656 None:intergenic
GCGTTTCAAATGGATGCCGA+AGG 0.622605 tig0029332:+27605 Msa1441630:CDS
AGAGCTTGAAGAATCAAATG+AGG 0.626048 tig0029332:+28884 Msa1441630:CDS
TATCACCAATGCAGTTGCAA+GGG 0.633978 tig0029332:+27904 Msa1441630:CDS
TTATTACACATGATGAAACC+AGG 0.637175 tig0029332:+27222 Msa1441630:CDS
CATACTTTCACTCCTATGAG+TGG 0.639566 tig0029332:-28203 None:intergenic
ACAAGGTACGCTCAGAACAA+AGG 0.639870 tig0029332:+27074 Msa1441630:CDS
CCAGGGTGGGATGCAAGGCA+CGG 0.641442 tig0029332:+27240 Msa1441630:CDS
ACGGGTTGCAAGATAATCAG+TGG 0.648204 tig0029332:+28104 Msa1441630:CDS
TTGGTTAGAAGCAATGAATG+GGG 0.648562 tig0029332:+27844 Msa1441630:CDS
AAGCAAAGAGTTACTACACA+AGG 0.651539 tig0029332:+27057 Msa1441630:CDS
ACACATGATGAAACCAGGGT+GGG 0.653979 tig0029332:+27227 Msa1441630:CDS
ACTTAGTAACACGGCCCATG+CGG 0.656322 tig0029332:-27106 None:intergenic
GTCTTATGCACTGAAAGTGG+CGG 0.656902 tig0029332:+27440 Msa1441630:CDS
TTGTTCTTGACTTAGTAACA+CGG 0.665948 tig0029332:-27115 None:intergenic
TACACATGATGAAACCAGGG+TGG 0.688016 tig0029332:+27226 Msa1441630:CDS
TATTACACATGATGAAACCA+GGG 0.694710 tig0029332:+27223 Msa1441630:CDS
TGTATCATTTGAGACAACCA+TGG 0.701765 tig0029332:-26937 None:intergenic
TCTTGATGCACGTTACAACG+AGG 0.755842 tig0029332:+28297 Msa1441630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGAAAAATAATGATATA+TGG + tig0029332:27270-27289 Msa1441630:CDS 10.0%
!! TAAAGAAAAATAATGATATA+TGG + tig0029332:27270-27289 Msa1441630:CDS 10.0%
!!! AAAATTAACTAATTGCTTTT+GGG + tig0029332:27628-27647 Msa1441630:CDS 15.0%
!!! TATTTATTTTTCAAGTATGT+TGG - tig0029332:27710-27729 None:intergenic 15.0%
!!! AAGTATGAATAAGTTTTTTA+AGG + tig0029332:28219-28238 Msa1441630:CDS 15.0%
!!! AAAATTAACTAATTGCTTTT+GGG + tig0029332:27628-27647 Msa1441630:CDS 15.0%
!!! TATTTATTTTTCAAGTATGT+TGG - tig0029332:27710-27729 None:intergenic 15.0%
!!! AAGTATGAATAAGTTTTTTA+AGG + tig0029332:28219-28238 Msa1441630:CDS 15.0%
!!! GAAAATTAACTAATTGCTTT+TGG + tig0029332:27627-27646 Msa1441630:CDS 20.0%
!!! ATTTTTCTTTCTTAGCATTT+CGG - tig0029332:28689-28708 None:intergenic 20.0%
!! TTCATTGTTTAATAGTGTTA+TGG + tig0029332:28761-28780 Msa1441630:CDS 20.0%
!!! GAAAATTAACTAATTGCTTT+TGG + tig0029332:27627-27646 Msa1441630:CDS 20.0%
!!! ATTTTTCTTTCTTAGCATTT+CGG - tig0029332:28689-28708 None:intergenic 20.0%
!! TTCATTGTTTAATAGTGTTA+TGG + tig0029332:28761-28780 Msa1441630:CDS 20.0%
!! AGTAATTGATAACATCTTGT+TGG - tig0029332:27487-27506 None:intergenic 25.0%
!! GCAATTAGTTAATTTTCCTT+CGG - tig0029332:27624-27643 None:intergenic 25.0%
!! AGAGTTGCTTACAAATATTT+TGG + tig0029332:27665-27684 Msa1441630:CDS 25.0%
!!! TTACAAATATTTTGGTGATG+TGG + tig0029332:27673-27692 Msa1441630:CDS 25.0%
!! CATCAACAATCAATTCTTTT+TGG + tig0029332:27767-27786 Msa1441630:CDS 25.0%
! ATTCTTCAATTGTGATAGAT+TGG - tig0029332:28051-28070 None:intergenic 25.0%
! GAAGCAATGATTGATAAATA+CGG + tig0029332:28085-28104 Msa1441630:CDS 25.0%
! AAGCAATGATTGATAAATAC+GGG + tig0029332:28086-28105 Msa1441630:CDS 25.0%
! TATACTCAATTCGATCAAAA+TGG + tig0029332:28137-28156 Msa1441630:CDS 25.0%
! AAATTATGATGTACATATGC+AGG - tig0029332:28166-28185 None:intergenic 25.0%
! GAAGCTTCAAAAATTTATAC+AGG + tig0029332:28388-28407 Msa1441630:CDS 25.0%
!!! AGAAAATTCAACTTTTTCTG+TGG - tig0029332:28463-28482 None:intergenic 25.0%
! TGAAAAGTCACATGATATTT+AGG - tig0029332:28531-28550 None:intergenic 25.0%
!! TTTTTCTTTCTTAGCATTTC+GGG - tig0029332:28688-28707 None:intergenic 25.0%
! GCTAAGAAAGAAAAATTTGA+AGG + tig0029332:28693-28712 Msa1441630:CDS 25.0%
! TTGACAATTGAAGAATTTGA+AGG + tig0029332:28717-28736 Msa1441630:CDS 25.0%
!! AGTAATTGATAACATCTTGT+TGG - tig0029332:27487-27506 None:intergenic 25.0%
!! GCAATTAGTTAATTTTCCTT+CGG - tig0029332:27624-27643 None:intergenic 25.0%
!! AGAGTTGCTTACAAATATTT+TGG + tig0029332:27665-27684 Msa1441630:CDS 25.0%
!!! TTACAAATATTTTGGTGATG+TGG + tig0029332:27673-27692 Msa1441630:CDS 25.0%
!! CATCAACAATCAATTCTTTT+TGG + tig0029332:27767-27786 Msa1441630:CDS 25.0%
! ATTCTTCAATTGTGATAGAT+TGG - tig0029332:28051-28070 None:intergenic 25.0%
! GAAGCAATGATTGATAAATA+CGG + tig0029332:28085-28104 Msa1441630:CDS 25.0%
! AAGCAATGATTGATAAATAC+GGG + tig0029332:28086-28105 Msa1441630:CDS 25.0%
! TATACTCAATTCGATCAAAA+TGG + tig0029332:28137-28156 Msa1441630:CDS 25.0%
! AAATTATGATGTACATATGC+AGG - tig0029332:28166-28185 None:intergenic 25.0%
! GAAGCTTCAAAAATTTATAC+AGG + tig0029332:28388-28407 Msa1441630:CDS 25.0%
!!! AGAAAATTCAACTTTTTCTG+TGG - tig0029332:28463-28482 None:intergenic 25.0%
! TGAAAAGTCACATGATATTT+AGG - tig0029332:28531-28550 None:intergenic 25.0%
!! TTTTTCTTTCTTAGCATTTC+GGG - tig0029332:28688-28707 None:intergenic 25.0%
! GCTAAGAAAGAAAAATTTGA+AGG + tig0029332:28693-28712 Msa1441630:CDS 25.0%
! TTGACAATTGAAGAATTTGA+AGG + tig0029332:28717-28736 Msa1441630:CDS 25.0%
TTAAACTCCATTCCTTCAAT+GGG - tig0029332:27026-27045 None:intergenic 30.0%
TTTAAACTCCATTCCTTCAA+TGG - tig0029332:27027-27046 None:intergenic 30.0%
TTGTTCTTGACTTAGTAACA+CGG - tig0029332:27118-27137 None:intergenic 30.0%
GTTACTAAGTCAAGAACAAA+CGG + tig0029332:27119-27138 Msa1441630:CDS 30.0%
AGAACAAACGGTATGATAAT+TGG + tig0029332:27131-27150 Msa1441630:CDS 30.0%
TCAAGAAATTCTTTGTTCCA+AGG + tig0029332:27154-27173 Msa1441630:CDS 30.0%
!! TCCTTGTTTCACATACTTTT+TGG - tig0029332:27192-27211 None:intergenic 30.0%
TTATTACACATGATGAAACC+AGG + tig0029332:27222-27241 Msa1441630:CDS 30.0%
TATTACACATGATGAAACCA+GGG + tig0029332:27223-27242 Msa1441630:CDS 30.0%
AATTGTCAGTTGAAGAATAC+TGG + tig0029332:27572-27591 Msa1441630:CDS 30.0%
ATTGTCAGTTGAAGAATACT+GGG + tig0029332:27573-27592 Msa1441630:CDS 30.0%
! GTTTTTCTATGCGTTTCAAA+TGG + tig0029332:27595-27614 Msa1441630:CDS 30.0%
TGATGATTAACTCCAGTAAT+TGG - tig0029332:27749-27768 None:intergenic 30.0%
!!! AAACTGTAGAGAGTTTTGTT+TGG + tig0029332:27810-27829 Msa1441630:CDS 30.0%
!! GGTCTGTGATAATAGTTTTA+GGG - tig0029332:27874-27893 None:intergenic 30.0%
! TGGTCTGTGATAATAGTTTT+AGG - tig0029332:27875-27894 None:intergenic 30.0%
CAATAATGGTGATTAACCTT+TGG - tig0029332:27935-27954 None:intergenic 30.0%
TTAATCACCATTATTGCATG+TGG + tig0029332:27939-27958 Msa1441630:CDS 30.0%
TTGAAGAATTTGAGTCTGAA+TGG + tig0029332:28062-28081 Msa1441630:CDS 30.0%
TGAAGAATTTGAGTCTGAAT+GGG + tig0029332:28063-28082 Msa1441630:CDS 30.0%
! GTACATCATAATTTTTGTGC+TGG + tig0029332:28172-28191 Msa1441630:CDS 30.0%
TGAGATATTTCAAGATGAGT+TGG + tig0029332:28419-28438 Msa1441630:CDS 30.0%
!! ATATTTCAAGATGAGTTGGT+TGG + tig0029332:28423-28442 Msa1441630:CDS 30.0%
! AGTTGAATTTTCTGATGAAG+TGG + tig0029332:28470-28489 Msa1441630:CDS 30.0%
TGTCAAAAGTTTGAATCGTT+TGG + tig0029332:28579-28598 Msa1441630:intron 30.0%
AATCGTTTGGTATTCTTTGT+AGG + tig0029332:28592-28611 Msa1441630:intron 30.0%
AACTGTGTTCCTAAAGAAAA+AGG + tig0029332:28623-28642 Msa1441630:CDS 30.0%
! GATAACGTACCTTTTTCTTT+AGG - tig0029332:28635-28654 None:intergenic 30.0%
ACAATTGAAGAATTTGAAGG+AGG + tig0029332:28720-28739 Msa1441630:CDS 30.0%
!! AATTTTCTGAAAGAGCTTCA+TGG + tig0029332:28796-28815 Msa1441630:CDS 30.0%
TTAAACTCCATTCCTTCAAT+GGG - tig0029332:27026-27045 None:intergenic 30.0%
TTTAAACTCCATTCCTTCAA+TGG - tig0029332:27027-27046 None:intergenic 30.0%
TTGTTCTTGACTTAGTAACA+CGG - tig0029332:27118-27137 None:intergenic 30.0%
GTTACTAAGTCAAGAACAAA+CGG + tig0029332:27119-27138 Msa1441630:CDS 30.0%
AGAACAAACGGTATGATAAT+TGG + tig0029332:27131-27150 Msa1441630:CDS 30.0%
TCAAGAAATTCTTTGTTCCA+AGG + tig0029332:27154-27173 Msa1441630:CDS 30.0%
!! TCCTTGTTTCACATACTTTT+TGG - tig0029332:27192-27211 None:intergenic 30.0%
TTATTACACATGATGAAACC+AGG + tig0029332:27222-27241 Msa1441630:CDS 30.0%
TATTACACATGATGAAACCA+GGG + tig0029332:27223-27242 Msa1441630:CDS 30.0%
AATTGTCAGTTGAAGAATAC+TGG + tig0029332:27572-27591 Msa1441630:CDS 30.0%
ATTGTCAGTTGAAGAATACT+GGG + tig0029332:27573-27592 Msa1441630:CDS 30.0%
! GTTTTTCTATGCGTTTCAAA+TGG + tig0029332:27595-27614 Msa1441630:CDS 30.0%
TGATGATTAACTCCAGTAAT+TGG - tig0029332:27749-27768 None:intergenic 30.0%
!!! AAACTGTAGAGAGTTTTGTT+TGG + tig0029332:27810-27829 Msa1441630:CDS 30.0%
!! GGTCTGTGATAATAGTTTTA+GGG - tig0029332:27874-27893 None:intergenic 30.0%
! TGGTCTGTGATAATAGTTTT+AGG - tig0029332:27875-27894 None:intergenic 30.0%
CAATAATGGTGATTAACCTT+TGG - tig0029332:27935-27954 None:intergenic 30.0%
TTAATCACCATTATTGCATG+TGG + tig0029332:27939-27958 Msa1441630:CDS 30.0%
TTGAAGAATTTGAGTCTGAA+TGG + tig0029332:28062-28081 Msa1441630:CDS 30.0%
TGAAGAATTTGAGTCTGAAT+GGG + tig0029332:28063-28082 Msa1441630:CDS 30.0%
! GTACATCATAATTTTTGTGC+TGG + tig0029332:28172-28191 Msa1441630:CDS 30.0%
TGAGATATTTCAAGATGAGT+TGG + tig0029332:28419-28438 Msa1441630:CDS 30.0%
!! ATATTTCAAGATGAGTTGGT+TGG + tig0029332:28423-28442 Msa1441630:CDS 30.0%
! AGTTGAATTTTCTGATGAAG+TGG + tig0029332:28470-28489 Msa1441630:CDS 30.0%
TGTCAAAAGTTTGAATCGTT+TGG + tig0029332:28579-28598 Msa1441630:intron 30.0%
AATCGTTTGGTATTCTTTGT+AGG + tig0029332:28592-28611 Msa1441630:intron 30.0%
AACTGTGTTCCTAAAGAAAA+AGG + tig0029332:28623-28642 Msa1441630:CDS 30.0%
! GATAACGTACCTTTTTCTTT+AGG - tig0029332:28635-28654 None:intergenic 30.0%
ACAATTGAAGAATTTGAAGG+AGG + tig0029332:28720-28739 Msa1441630:CDS 30.0%
!! AATTTTCTGAAAGAGCTTCA+TGG + tig0029332:28796-28815 Msa1441630:CDS 30.0%
! TATGGATGGAGATTTTACCA+TGG + tig0029332:26920-26939 Msa1441630:CDS 35.0%
! TGTATCATTTGAGACAACCA+TGG - tig0029332:26940-26959 None:intergenic 35.0%
AAGCAAAGAGTTACTACACA+AGG + tig0029332:27057-27076 Msa1441630:CDS 35.0%
!!! AAAGGTTTTAGTTTCCGCAT+GGG + tig0029332:27092-27111 Msa1441630:CDS 35.0%
AGAAATTCTTTGTTCCAAGG+AGG + tig0029332:27157-27176 Msa1441630:CDS 35.0%
GAAATTCTTTGTTCCAAGGA+GGG + tig0029332:27158-27177 Msa1441630:CDS 35.0%
AAATTCTTTGTTCCAAGGAG+GGG + tig0029332:27159-27178 Msa1441630:CDS 35.0%
! GCCAAAAAGTATGTGAAACA+AGG + tig0029332:27188-27207 Msa1441630:CDS 35.0%
!!! AGTGGCGGTATTGATAATTT+TGG + tig0029332:27455-27474 Msa1441630:CDS 35.0%
!!! ATTGCTTTTGGGTTGATTCA+AGG + tig0029332:27639-27658 Msa1441630:CDS 35.0%
! ACTCCTTTTGTTCCAATTAC+TGG + tig0029332:27734-27753 Msa1441630:CDS 35.0%
ACTCCAGTAATTGGAACAAA+AGG - tig0029332:27740-27759 None:intergenic 35.0%
TTGTTTGGTTGCTAAGTACT+TGG + tig0029332:27825-27844 Msa1441630:CDS 35.0%
ACTTGGTTAGAAGCAATGAA+TGG + tig0029332:27842-27861 Msa1441630:CDS 35.0%
CTTGGTTAGAAGCAATGAAT+GGG + tig0029332:27843-27862 Msa1441630:CDS 35.0%
TTGGTTAGAAGCAATGAATG+GGG + tig0029332:27844-27863 Msa1441630:CDS 35.0%
CAATATGCCACATGCAATAA+TGG - tig0029332:27949-27968 None:intergenic 35.0%
TTATTGCATGTGGCATATTG+AGG + tig0029332:27949-27968 Msa1441630:CDS 35.0%
CACATGAATCAGATCTATCA+TGG + tig0029332:27986-28005 Msa1441630:CDS 35.0%
! TTTGAAGCTTCTTCTTCCAT+GGG - tig0029332:28379-28398 None:intergenic 35.0%
!!! TTTTGAAGCTTCTTCTTCCA+TGG - tig0029332:28380-28399 None:intergenic 35.0%
GTTGTAGAACATACTGTGAA+GGG - tig0029332:28659-28678 None:intergenic 35.0%
AGAGCTTGAAGAATCAAATG+AGG + tig0029332:28884-28903 Msa1441630:CDS 35.0%
! TATGGATGGAGATTTTACCA+TGG + tig0029332:26920-26939 Msa1441630:CDS 35.0%
! TGTATCATTTGAGACAACCA+TGG - tig0029332:26940-26959 None:intergenic 35.0%
AAGCAAAGAGTTACTACACA+AGG + tig0029332:27057-27076 Msa1441630:CDS 35.0%
!!! AAAGGTTTTAGTTTCCGCAT+GGG + tig0029332:27092-27111 Msa1441630:CDS 35.0%
AGAAATTCTTTGTTCCAAGG+AGG + tig0029332:27157-27176 Msa1441630:CDS 35.0%
GAAATTCTTTGTTCCAAGGA+GGG + tig0029332:27158-27177 Msa1441630:CDS 35.0%
AAATTCTTTGTTCCAAGGAG+GGG + tig0029332:27159-27178 Msa1441630:CDS 35.0%
! GCCAAAAAGTATGTGAAACA+AGG + tig0029332:27188-27207 Msa1441630:CDS 35.0%
!!! AGTGGCGGTATTGATAATTT+TGG + tig0029332:27455-27474 Msa1441630:CDS 35.0%
!!! ATTGCTTTTGGGTTGATTCA+AGG + tig0029332:27639-27658 Msa1441630:CDS 35.0%
! ACTCCTTTTGTTCCAATTAC+TGG + tig0029332:27734-27753 Msa1441630:CDS 35.0%
ACTCCAGTAATTGGAACAAA+AGG - tig0029332:27740-27759 None:intergenic 35.0%
TTGTTTGGTTGCTAAGTACT+TGG + tig0029332:27825-27844 Msa1441630:CDS 35.0%
ACTTGGTTAGAAGCAATGAA+TGG + tig0029332:27842-27861 Msa1441630:CDS 35.0%
CTTGGTTAGAAGCAATGAAT+GGG + tig0029332:27843-27862 Msa1441630:CDS 35.0%
TTGGTTAGAAGCAATGAATG+GGG + tig0029332:27844-27863 Msa1441630:CDS 35.0%
CAATATGCCACATGCAATAA+TGG - tig0029332:27949-27968 None:intergenic 35.0%
TTATTGCATGTGGCATATTG+AGG + tig0029332:27949-27968 Msa1441630:CDS 35.0%
CACATGAATCAGATCTATCA+TGG + tig0029332:27986-28005 Msa1441630:CDS 35.0%
! TTTGAAGCTTCTTCTTCCAT+GGG - tig0029332:28379-28398 None:intergenic 35.0%
!!! TTTTGAAGCTTCTTCTTCCA+TGG - tig0029332:28380-28399 None:intergenic 35.0%
GTTGTAGAACATACTGTGAA+GGG - tig0029332:28659-28678 None:intergenic 35.0%
AGAGCTTGAAGAATCAAATG+AGG + tig0029332:28884-28903 Msa1441630:CDS 35.0%
AGGTCATGAGATGACAGATA+TGG + tig0029332:26902-26921 Msa1441630:CDS 40.0%
CATGAGATGACAGATATGGA+TGG + tig0029332:26906-26925 Msa1441630:CDS 40.0%
! ATTCCTTCAATGGGCTCTAA+GGG - tig0029332:27017-27036 None:intergenic 40.0%
!!! CAAAGGTTTTAGTTTCCGCA+TGG + tig0029332:27091-27110 Msa1441630:CDS 40.0%
GAGAAAACAGCTGGTGATTA+TGG - tig0029332:27319-27338 None:intergenic 40.0%
ACTGATGTGCTTGATGAATC+TGG + tig0029332:27398-27417 Msa1441630:CDS 40.0%
! GTGCTTGATGAATCTGGTTT+AGG + tig0029332:27404-27423 Msa1441630:CDS 40.0%
TCTGTCTTATGCACTGAAAG+TGG + tig0029332:27437-27456 Msa1441630:CDS 40.0%
!!! TTTTTGGTTGTGCTCTCTTG+TGG + tig0029332:27783-27802 Msa1441630:CDS 40.0%
!! TTTTGGTTGTGCTCTCTTGT+GGG + tig0029332:27784-27803 Msa1441630:CDS 40.0%
TATCACCAATGCAGTTGCAA+GGG + tig0029332:27904-27923 Msa1441630:CDS 40.0%
TAGATCTGATTCATGTGCTC+TGG - tig0029332:27983-28002 None:intergenic 40.0%
CATACTTTCACTCCTATGAG+TGG - tig0029332:28206-28225 None:intergenic 40.0%
! TGTGTCAGAAACTTGCTCAA+TGG - tig0029332:28265-28284 None:intergenic 40.0%
GGGTATAAAGTTCGCAAAAG+TGG - tig0029332:28358-28377 None:intergenic 40.0%
TTTGCGAACTTTATACCCCA+TGG + tig0029332:28360-28379 Msa1441630:CDS 40.0%
TTGAAGCTTCTTCTTCCATG+GGG - tig0029332:28378-28397 None:intergenic 40.0%
CGTTGTAGAACATACTGTGA+AGG - tig0029332:28660-28679 None:intergenic 40.0%
CACAGTATGTTCTACAACGA+TGG + tig0029332:28661-28680 Msa1441630:CDS 40.0%
TAGTGTTATGGTTCGTTCAC+TGG + tig0029332:28773-28792 Msa1441630:CDS 40.0%
AGGTCATGAGATGACAGATA+TGG + tig0029332:26902-26921 Msa1441630:CDS 40.0%
CATGAGATGACAGATATGGA+TGG + tig0029332:26906-26925 Msa1441630:CDS 40.0%
! ATTCCTTCAATGGGCTCTAA+GGG - tig0029332:27017-27036 None:intergenic 40.0%
!!! CAAAGGTTTTAGTTTCCGCA+TGG + tig0029332:27091-27110 Msa1441630:CDS 40.0%
GAGAAAACAGCTGGTGATTA+TGG - tig0029332:27319-27338 None:intergenic 40.0%
ACTGATGTGCTTGATGAATC+TGG + tig0029332:27398-27417 Msa1441630:CDS 40.0%
! GTGCTTGATGAATCTGGTTT+AGG + tig0029332:27404-27423 Msa1441630:CDS 40.0%
TCTGTCTTATGCACTGAAAG+TGG + tig0029332:27437-27456 Msa1441630:CDS 40.0%
!!! TTTTTGGTTGTGCTCTCTTG+TGG + tig0029332:27783-27802 Msa1441630:CDS 40.0%
!! TTTTGGTTGTGCTCTCTTGT+GGG + tig0029332:27784-27803 Msa1441630:CDS 40.0%
TATCACCAATGCAGTTGCAA+GGG + tig0029332:27904-27923 Msa1441630:CDS 40.0%
TAGATCTGATTCATGTGCTC+TGG - tig0029332:27983-28002 None:intergenic 40.0%
CATACTTTCACTCCTATGAG+TGG - tig0029332:28206-28225 None:intergenic 40.0%
! TGTGTCAGAAACTTGCTCAA+TGG - tig0029332:28265-28284 None:intergenic 40.0%
GGGTATAAAGTTCGCAAAAG+TGG - tig0029332:28358-28377 None:intergenic 40.0%
TTTGCGAACTTTATACCCCA+TGG + tig0029332:28360-28379 Msa1441630:CDS 40.0%
TTGAAGCTTCTTCTTCCATG+GGG - tig0029332:28378-28397 None:intergenic 40.0%
CGTTGTAGAACATACTGTGA+AGG - tig0029332:28660-28679 None:intergenic 40.0%
CACAGTATGTTCTACAACGA+TGG + tig0029332:28661-28680 Msa1441630:CDS 40.0%
TAGTGTTATGGTTCGTTCAC+TGG + tig0029332:28773-28792 Msa1441630:CDS 40.0%
! GATGGTGGTTCACTATTGAG+AGG - tig0029332:26987-27006 None:intergenic 45.0%
!! TTCCTTCAATGGGCTCTAAG+GGG - tig0029332:27016-27035 None:intergenic 45.0%
! CATTCCTTCAATGGGCTCTA+AGG - tig0029332:27018-27037 None:intergenic 45.0%
CTTAGAGCCCATTGAAGGAA+TGG + tig0029332:27016-27035 Msa1441630:CDS 45.0%
ACAAGGTACGCTCAGAACAA+AGG + tig0029332:27074-27093 Msa1441630:CDS 45.0%
TACACATGATGAAACCAGGG+TGG + tig0029332:27226-27245 Msa1441630:CDS 45.0%
ACACATGATGAAACCAGGGT+GGG + tig0029332:27227-27246 Msa1441630:CDS 45.0%
! CACTTCTAGGAGAAAACAGC+TGG - tig0029332:27328-27347 None:intergenic 45.0%
GTCTTATGCACTGAAAGTGG+CGG + tig0029332:27440-27459 Msa1441630:CDS 45.0%
! CATTGGTGATAGCAGTGTGT+TGG - tig0029332:27895-27914 None:intergenic 45.0%
CTATCACCAATGCAGTTGCA+AGG + tig0029332:27903-27922 Msa1441630:CDS 45.0%
AAACACCCTTGCAACTGCAT+TGG - tig0029332:27912-27931 None:intergenic 45.0%
!! AGTTGCAAGGGTGTTTCCAA+AGG + tig0029332:27916-27935 Msa1441630:CDS 45.0%
! ACGGGTTGCAAGATAATCAG+TGG + tig0029332:28104-28123 Msa1441630:CDS 45.0%
CTGGAATGTCTACCACTCAT+AGG + tig0029332:28191-28210 Msa1441630:CDS 45.0%
TCTTGATGCACGTTACAACG+AGG + tig0029332:28297-28316 Msa1441630:CDS 45.0%
ATGCACGTTACAACGAGGAA+AGG + tig0029332:28302-28321 Msa1441630:CDS 45.0%
TGCACGTTACAACGAGGAAA+GGG + tig0029332:28303-28322 Msa1441630:CDS 45.0%
! GATGGTGGTTCACTATTGAG+AGG - tig0029332:26987-27006 None:intergenic 45.0%
!! TTCCTTCAATGGGCTCTAAG+GGG - tig0029332:27016-27035 None:intergenic 45.0%
! CATTCCTTCAATGGGCTCTA+AGG - tig0029332:27018-27037 None:intergenic 45.0%
CTTAGAGCCCATTGAAGGAA+TGG + tig0029332:27016-27035 Msa1441630:CDS 45.0%
ACAAGGTACGCTCAGAACAA+AGG + tig0029332:27074-27093 Msa1441630:CDS 45.0%
TACACATGATGAAACCAGGG+TGG + tig0029332:27226-27245 Msa1441630:CDS 45.0%
ACACATGATGAAACCAGGGT+GGG + tig0029332:27227-27246 Msa1441630:CDS 45.0%
! CACTTCTAGGAGAAAACAGC+TGG - tig0029332:27328-27347 None:intergenic 45.0%
GTCTTATGCACTGAAAGTGG+CGG + tig0029332:27440-27459 Msa1441630:CDS 45.0%
! CATTGGTGATAGCAGTGTGT+TGG - tig0029332:27895-27914 None:intergenic 45.0%
CTATCACCAATGCAGTTGCA+AGG + tig0029332:27903-27922 Msa1441630:CDS 45.0%
AAACACCCTTGCAACTGCAT+TGG - tig0029332:27912-27931 None:intergenic 45.0%
!! AGTTGCAAGGGTGTTTCCAA+AGG + tig0029332:27916-27935 Msa1441630:CDS 45.0%
! ACGGGTTGCAAGATAATCAG+TGG + tig0029332:28104-28123 Msa1441630:CDS 45.0%
CTGGAATGTCTACCACTCAT+AGG + tig0029332:28191-28210 Msa1441630:CDS 45.0%
TCTTGATGCACGTTACAACG+AGG + tig0029332:28297-28316 Msa1441630:CDS 45.0%
ATGCACGTTACAACGAGGAA+AGG + tig0029332:28302-28321 Msa1441630:CDS 45.0%
TGCACGTTACAACGAGGAAA+GGG + tig0029332:28303-28322 Msa1441630:CDS 45.0%
!! TCCTTCAATGGGCTCTAAGG+GGG - tig0029332:27015-27034 None:intergenic 50.0%
ACTTAGTAACACGGCCCATG+CGG - tig0029332:27109-27128 None:intergenic 50.0%
CGAAGAGACTGTGCACTTCT+AGG - tig0029332:27341-27360 None:intergenic 50.0%
GCGTTTCAAATGGATGCCGA+AGG + tig0029332:27605-27624 Msa1441630:CDS 50.0%
!! TCCTTCAATGGGCTCTAAGG+GGG - tig0029332:27015-27034 None:intergenic 50.0%
ACTTAGTAACACGGCCCATG+CGG - tig0029332:27109-27128 None:intergenic 50.0%
CGAAGAGACTGTGCACTTCT+AGG - tig0029332:27341-27360 None:intergenic 50.0%
GCGTTTCAAATGGATGCCGA+AGG + tig0029332:27605-27624 Msa1441630:CDS 50.0%
!! CCTTCAATGGGCTCTAAGGG+GGG - tig0029332:27014-27033 None:intergenic 55.0%
! TTTGGCTCGAAACCCCTCCT+TGG - tig0029332:27174-27193 None:intergenic 55.0%
TGAAACCAGGGTGGGATGCA+AGG + tig0029332:27235-27254 Msa1441630:CDS 55.0%
!! CCTTCAATGGGCTCTAAGGG+GGG - tig0029332:27014-27033 None:intergenic 55.0%
! TTTGGCTCGAAACCCCTCCT+TGG - tig0029332:27174-27193 None:intergenic 55.0%
TGAAACCAGGGTGGGATGCA+AGG + tig0029332:27235-27254 Msa1441630:CDS 55.0%
! TCTAAGGGGGGCTCTGATGG+TGG - tig0029332:27002-27021 None:intergenic 60.0%
CCCCCCTTAGAGCCCATTGA+AGG + tig0029332:27011-27030 Msa1441630:CDS 60.0%
! TCTAAGGGGGGCTCTGATGG+TGG - tig0029332:27002-27021 None:intergenic 60.0%
CCCCCCTTAGAGCCCATTGA+AGG + tig0029332:27011-27030 Msa1441630:CDS 60.0%
!! GGCTCTAAGGGGGGCTCTGA+TGG - tig0029332:27005-27024 None:intergenic 65.0%
CCAGGGTGGGATGCAAGGCA+CGG + tig0029332:27240-27259 Msa1441630:CDS 65.0%
!! GGCTCTAAGGGGGGCTCTGA+TGG - tig0029332:27005-27024 None:intergenic 65.0%
CCAGGGTGGGATGCAAGGCA+CGG + tig0029332:27240-27259 Msa1441630:CDS 65.0%
CCGTGCCTTGCATCCCACCC+TGG - tig0029332:27243-27262 None:intergenic 70.0%
CCGTGCCTTGCATCCCACCC+TGG - tig0029332:27243-27262 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0029332 gene 26897 28929 26897 ID=Msa1441630;Name=Msa1441630
tig0029332 mRNA 26897 28929 26897 ID=Msa1441630-mRNA-1;Parent=Msa1441630;Name=Msa1441630-mRNA-1;_AED=0.17;_eAED=0.22;_QI=0|0|0|1|1|1|2|0|640
tig0029332 exon 26897 28503 26897 ID=Msa1441630-mRNA-1:exon:12948;Parent=Msa1441630-mRNA-1
tig0029332 exon 28614 28929 28614 ID=Msa1441630-mRNA-1:exon:12949;Parent=Msa1441630-mRNA-1
tig0029332 CDS 26897 28503 26897 ID=Msa1441630-mRNA-1:cds;Parent=Msa1441630-mRNA-1
tig0029332 CDS 28614 28929 28614 ID=Msa1441630-mRNA-1:cds;Parent=Msa1441630-mRNA-1
Gene Sequence

>Msa1441630

ATGGCAGGTCATGAGATGACAGATATGGATGGAGATTTTACCATGGTTGTCTCAAATGATACACATGTCAGTGCTCTTGATGTGAAGCCTCTCAATAGTGAACCACCATCAGAGCCCCCCTTAGAGCCCATTGAAGGAATGGAGTTTAAATCATTTGAAGAAGCAAAGAGTTACTACACAAGGTACGCTCAGAACAAAGGTTTTAGTTTCCGCATGGGCCGTGTTACTAAGTCAAGAACAAACGGTATGATAATTGGTCAAGAAATTCTTTGTTCCAAGGAGGGGTTTCGAGCCAAAAAGTATGTGAAACAAGGAAATAGTAGTCTTATTACACATGATGAAACCAGGGTGGGATGCAAGGCACGGTTATATTTAAAGAAAAATAATGATATATGGATTGTTTCTAGATTTGTAAGTGACCATAATCACCAGCTGTTTTCTCCTAGAAGTGCACAGTCTCTTCGCGTACATAGAAAGAAAACTAAAGTGCAAAAGACACTTACTGATGTGCTTGATGAATCTGGTTTAGGCAAAACAACATCTGTCTTATGCACTGAAAGTGGCGGTATTGATAATTTTGGATCTAGCCAACAAGATGTTATCAATTACTTAAGTGTACAGAGACAAAAACAATTTGAAAACAGAGATGCTCAATTGATGTTATCATACTTTAAGAATTGTCAGTTGAAGAATACTGGGTTTTTCTATGCGTTTCAAATGGATGCCGAAGGAAAATTAACTAATTGCTTTTGGGTTGATTCAAGGTCTAGAGTTGCTTACAAATATTTTGGTGATGTGGTTACTTTTGATCCAACATACTTGAAAAATAAATACAAAACTCCTTTTGTTCCAATTACTGGAGTTAATCATCATCAACAATCAATTCTTTTTGGTTGTGCTCTCTTGTGGGATGAAACTGTAGAGAGTTTTGTTTGGTTGCTAAGTACTTGGTTAGAAGCAATGAATGGGGTTTGCCCTAAAACTATTATCACAGACCAACACACTGCTATCACCAATGCAGTTGCAAGGGTGTTTCCAAAGGTTAATCACCATTATTGCATGTGGCATATTGAGGAAAAAGTTCCAGAGCACATGAATCAGATCTATCATGGACACAGTGAATTTAAAAATCATTTTTACAAGTGCATTCACCAATCTATCACAATTGAAGAATTTGAGTCTGAATGGGAAGCAATGATTGATAAATACGGGTTGCAAGATAATCAGTGGCTAGTGAAGATATACTCAATTCGATCAAAATGGATTCCTGCATATGTACATCATAATTTTTGTGCTGGAATGTCTACCACTCATAGGAGTGAAAGTATGAATAAGTTTTTTAAGGATTTCTTGAATTCAAGTACTCCATTGAGCAAGTTTCTGACACAATATGAGAAAGCTCTTGATGCACGTTACAACGAGGAAAGGGAGAAAACTGTCAAGACGATGAATTCAAAACCACTTTTGCGAACTTTATACCCCATGGAAGAAGAAGCTTCAAAAATTTATACAGGAAATTGTTTGAGATATTTCAAGATGAGTTGGTTGGCTCTCAAATGTTTACCACAGAAAAAGTTGAATTTTCTGATGAAGTGGCAACATACAAAGCATATCTTAACTGTGTTCCTAAAGAAAAAGGTACGTTATCTCCCTTCACAGTATGTTCTACAACGATGGACCCGAAATGCTAAGAAAGAAAAATTTGAAGGATTGACAATTGAAGAATTTGAAGGAGGAAACAAAGCTTCTAGCACTTCATTGTTTAATAGTGTTATGGTTCGTTCACTGGAATTTTCTGAAAGAGCTTCATGGTCAAAAAAACATCATGATATTGCAATTCAATGTTTGCAAAATGCAATTTCAAAACTTGATCTATTAGAGCTTGAAGAATCAAATGAGGAGTTTGTTAATTTGACATCTTAA
Protein sequence

>Msa1441630

MAGHEMTDMDGDFTMVVSNDTHVSALDVKPLNSEPPSEPPLEPIEGMEFKSFEEAKSYYTRYAQNKGFSFRMGRVTKSRTNGMIIGQEILCSKEGFRAKKYVKQGNSSLITHDETRVGCKARLYLKKNNDIWIVSRFVSDHNHQLFSPRSAQSLRVHRKKTKVQKTLTDVLDESGLGKTTSVLCTESGGIDNFGSSQQDVINYLSVQRQKQFENRDAQLMLSYFKNCQLKNTGFFYAFQMDAEGKLTNCFWVDSRSRVAYKYFGDVVTFDPTYLKNKYKTPFVPITGVNHHQQSILFGCALLWDETVESFVWLLSTWLEAMNGVCPKTIITDQHTAITNAVARVFPKVNHHYCMWHIEEKVPEHMNQIYHGHSEFKNHFYKCIHQSITIEEFESEWEAMIDKYGLQDNQWLVKIYSIRSKWIPAYVHHNFCAGMSTTHRSESMNKFFKDFLNSSTPLSKFLTQYEKALDARYNEEREKTVKTMNSKPLLRTLYPMEEEASKIYTGNCLRYFKMSWLALKCLPQKKLNFLMKWQHTKHILTVFLKKKVRYLPSQYVLQRWTRNAKKEKFEGLTIEEFEGGNKASSTSLFNSVMVRSLEFSERASWSKKHHDIAIQCLQNAISKLDLLELEESNEEFVNLTS*