Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443000 | sp|Q76E23|IF4G_ARATH | 42.733 | 1376 | 644 | 36 | 1 | 1276 | 1 | 1332 | 0.0 | 873 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443000 | A0A396GAE6 | 95.533 | 1276 | 56 | 1 | 1 | 1276 | 1 | 1275 | 0.0 | 2343 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1404220 | Msa1443000 | 0.812415 | 4.288369e-51 | -8.615850e-47 |
Msa1229430 | Msa1443000 | 0.916972 | 9.354876e-86 | -8.615850e-47 |
Msa1256070 | Msa1443000 | 0.834719 | 2.547094e-56 | -8.615850e-47 |
Msa1279490 | Msa1443000 | 0.826019 | 3.413600e-54 | -8.615850e-47 |
Msa1309700 | Msa1443000 | 0.929484 | 6.502997e-93 | -8.615850e-47 |
Msa0378410 | Msa1443000 | 0.827694 | 1.358277e-54 | -8.615850e-47 |
Msa1083420 | Msa1443000 | 0.809450 | 1.880549e-50 | -8.615850e-47 |
Msa1165370 | Msa1443000 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443000 | MtrunA17_Chr8g0336451 | 95.533 | 1276 | 56 | 1 | 1 | 1276 | 1 | 1275 | 0.0 | 2343 |
Msa1443000 | MtrunA17_Chr7g0233281 | 73.175 | 589 | 144 | 7 | 700 | 1276 | 803 | 1389 | 0.0 | 860 |
Msa1443000 | MtrunA17_Chr8g0335521 | 89.697 | 165 | 17 | 0 | 1085 | 1249 | 1 | 165 | 3.31e-96 | 305 |
Msa1443000 | MtrunA17_Chr8g0335511 | 86.400 | 125 | 15 | 1 | 1085 | 1207 | 1 | 125 | 3.01e-65 | 217 |
Msa1443000 | MtrunA17_Chr4g0073751 | 45.968 | 248 | 120 | 6 | 1029 | 1269 | 194 | 434 | 1.79e-53 | 202 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1443000 | AT3G60240.2 | 43.033 | 1378 | 633 | 38 | 1 | 1276 | 1 | 1328 | 0.0 | 875 |
Msa1443000 | AT3G60240.3 | 42.733 | 1376 | 642 | 37 | 1 | 1276 | 1 | 1330 | 0.0 | 874 |
Msa1443000 | AT3G60240.4 | 42.733 | 1376 | 644 | 36 | 1 | 1276 | 1 | 1332 | 0.0 | 873 |
Msa1443000 | AT5G57870.1 | 44.068 | 236 | 121 | 4 | 1040 | 1269 | 217 | 447 | 3.39e-50 | 192 |
Msa1443000 | AT5G57870.2 | 44.068 | 236 | 121 | 4 | 1040 | 1269 | 213 | 443 | 3.44e-50 | 192 |
Msa1443000 | AT2G24050.1 | 40.000 | 290 | 147 | 9 | 994 | 1269 | 130 | 406 | 3.52e-49 | 188 |
Msa1443000 | AT1G62410.1 | 36.923 | 195 | 112 | 4 | 1070 | 1259 | 8 | 196 | 2.95e-31 | 123 |
Find 464 sgRNAs with CRISPR-Local
Find 678 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGGTGGGGCGATCCTTTC+TGG | 0.026717 | tig0030275:-2212 | Msa1443000:CDS |
TCCCGGCAGCATCTGCTTTC+TGG | 0.082190 | tig0030275:+2831 | None:intergenic |
CTTAGCTCTTCATGCGTTTC+AGG | 0.098207 | tig0030275:+4630 | None:intergenic |
TTGATTTCCTTGGTTGTTTC+TGG | 0.118602 | tig0030275:+2983 | None:intergenic |
GTACCTTAAAAGTTGAAATT+AGG | 0.120700 | tig0030275:+7919 | None:intergenic |
AGAACTAGGAGGTGGATAAT+AGG | 0.157573 | tig0030275:+4455 | None:intergenic |
ACAACATGAATTTATCTTCT+AGG | 0.172827 | tig0030275:-1395 | Msa1443000:CDS |
GCCTTATTTGGTTCTAAATT+TGG | 0.176203 | tig0030275:+2896 | None:intergenic |
TCCACAATCTCTTCCAATTC+TGG | 0.178388 | tig0030275:-8045 | Msa1443000:five_prime_UTR |
CATGGCCAAGGAGGCAATTT+TGG | 0.188751 | tig0030275:-2272 | Msa1443000:CDS |
AGAAGGAACCCCATGGATTT+TGG | 0.230347 | tig0030275:-1199 | Msa1443000:CDS |
CCTTCTGTTGTTCCTGTACC+TGG | 0.234309 | tig0030275:-5017 | Msa1443000:CDS |
AGAAACACCACTTGGTTTAA+TGG | 0.250784 | tig0030275:+4203 | None:intergenic |
AAGAGCTAAGGCTTGATAAA+AGG | 0.251510 | tig0030275:-4617 | Msa1443000:CDS |
CCACCCTGCTGCTGGGGATA+TGG | 0.253060 | tig0030275:+4699 | None:intergenic |
GGTCTTTGAGGATAATTAAT+TGG | 0.254328 | tig0030275:+1043 | None:intergenic |
CTTTCTGGGCCAATGCAATC+TGG | 0.254519 | tig0030275:-2197 | Msa1443000:CDS |
ATGCACAAGGTGGGCAATAT+AGG | 0.265405 | tig0030275:-6300 | Msa1443000:CDS |
GAGATTTCCGAGGAGGTTTC+GGG | 0.273588 | tig0030275:+4129 | None:intergenic |
GTTAATGTGTGTGAAGATTA+AGG | 0.276632 | tig0030275:+8130 | None:intergenic |
TGAGATTGAATTTGTGGATT+AGG | 0.278140 | tig0030275:+4939 | None:intergenic |
GAACAATGGTCCACAAAATA+TGG | 0.282799 | tig0030275:-4370 | Msa1443000:CDS |
ACCAAATTTAGAACCAAATA+AGG | 0.285072 | tig0030275:-2897 | Msa1443000:CDS |
CCAACATTTCCGATTGGTAT+AGG | 0.288031 | tig0030275:+4876 | None:intergenic |
TACCTTAAAAGTTGAAATTA+GGG | 0.290022 | tig0030275:+7920 | None:intergenic |
ATCCATATGTTCCTTAGCTT+TGG | 0.290292 | tig0030275:+1449 | None:intergenic |
AGAACAAGAAGAGGCAAATA+AGG | 0.298146 | tig0030275:-1718 | Msa1443000:CDS |
GATCTTTATAATGCATATAA+AGG | 0.298524 | tig0030275:-2800 | Msa1443000:CDS |
CGCTTCTGCTCATCTAAATT+AGG | 0.302789 | tig0030275:+5483 | None:intergenic |
AGAGATTTCCGAGGAGGTTT+CGG | 0.304061 | tig0030275:+4128 | None:intergenic |
CAGAAGAAATCTGGGAAAAT+AGG | 0.305949 | tig0030275:-3907 | Msa1443000:CDS |
CAAAATTTCCACCCTGCTGC+TGG | 0.306398 | tig0030275:+4691 | None:intergenic |
GGCCTCTGCATCTGGCTTGC+CGG | 0.309737 | tig0030275:+5038 | None:intergenic |
GAACTAGGAGGTGGATAATA+GGG | 0.311941 | tig0030275:+4456 | None:intergenic |
CCGGTGTCAAAGCTGGCAAC+TGG | 0.312674 | tig0030275:+5057 | None:intergenic |
TTTGAGGAGTTAGTTTGTTC+AGG | 0.322262 | tig0030275:+1982 | None:intergenic |
AAGGATAACCAGAAGAAATC+TGG | 0.324148 | tig0030275:-3916 | Msa1443000:CDS |
TCCATATGTTCCTTAGCTTT+GGG | 0.324917 | tig0030275:+1450 | None:intergenic |
CAGTTTGGATCGATTGTTCC+TGG | 0.325734 | tig0030275:-5645 | Msa1443000:CDS |
GACAGTAGTATATCTGATAC+TGG | 0.327338 | tig0030275:-3726 | Msa1443000:CDS |
AGAATGCCTAGCGGTATTAA+TGG | 0.330627 | tig0030275:-896 | Msa1443000:three_prime_UTR |
GAAGAGAGAGAAAGTTGAAT+AGG | 0.335077 | tig0030275:+8082 | None:intergenic |
CTAGGTGGCTGCTGCTGCTT+CGG | 0.335312 | tig0030275:+5152 | None:intergenic |
CAACAGAAGGCCTCTGCATC+TGG | 0.336441 | tig0030275:+5030 | None:intergenic |
TCAATACCTGATGTGCATTC+TGG | 0.340224 | tig0030275:-935 | Msa1443000:three_prime_UTR |
CCTTCGAATTATTATCCTTC+CGG | 0.340630 | tig0030275:-4498 | Msa1443000:CDS |
TCTACTCAAACACGTGGATA+TGG | 0.341608 | tig0030275:-1118 | Msa1443000:CDS |
GCTGAGAAGAAGTATGAAAT+AGG | 0.351753 | tig0030275:-2053 | Msa1443000:CDS |
GAAGATTAAGGTTAAGGTTA+AGG | 0.352636 | tig0030275:+8142 | None:intergenic |
GCTGAGTGTTGGGAGTTATC+TGG | 0.352770 | tig0030275:+4415 | None:intergenic |
GATGAGCGAAACTTATGTTA+TGG | 0.357477 | tig0030275:+4778 | None:intergenic |
TCCCCTAGCAAGACCACCTT+GGG | 0.359332 | tig0030275:+991 | None:intergenic |
TGTACTATCATTGATTTCCT+TGG | 0.359858 | tig0030275:+2973 | None:intergenic |
TTGACTAATTCTAGTATTTG+TGG | 0.360999 | tig0030275:-4162 | Msa1443000:CDS |
TAACATGCGCCTTCTTGCCT+TGG | 0.361754 | tig0030275:+1638 | None:intergenic |
CCTAACTGACCTCCTATTAG+AGG | 0.362774 | tig0030275:+7524 | None:intergenic |
ATGATGATCGGAATCTAAAT+AGG | 0.364663 | tig0030275:-724 | Msa1443000:three_prime_UTR |
TGTGATTTGAGGGATTATTC+AGG | 0.366576 | tig0030275:-7699 | Msa1443000:five_prime_UTR |
GAAGAGTTGGACCTACTAAC+AGG | 0.367635 | tig0030275:+3940 | None:intergenic |
TGAATTTGTCGGTCCTCTAC+TGG | 0.367938 | tig0030275:+964 | None:intergenic |
CGTTGCCACCTCTCCCCGTC+AGG | 0.367976 | tig0030275:+2143 | None:intergenic |
ATCCCCTGAGATTGAATTTG+TGG | 0.369689 | tig0030275:+4933 | None:intergenic |
CTGGTTATCCTTTGAAGAGT+TGG | 0.369729 | tig0030275:+3927 | None:intergenic |
TGGTAGGATGGGTCGTGGTA+TGG | 0.372273 | tig0030275:-1239 | Msa1443000:CDS |
TGCAAGCTGATGAGTACTAT+TGG | 0.373297 | tig0030275:-1489 | Msa1443000:CDS |
ACAGATGCAGCAGATTGTTT+TGG | 0.374699 | tig0030275:+4057 | None:intergenic |
AACACGTGGATATGGTTTAC+AGG | 0.378611 | tig0030275:-1110 | Msa1443000:CDS |
GTGTGTGAAGATTAAGGTTA+AGG | 0.379121 | tig0030275:+8136 | None:intergenic |
GCCGTAATTTCAAAACCTTC+AGG | 0.379169 | tig0030275:+2485 | None:intergenic |
TTAGGAAACATCAGATTGAT+TGG | 0.380663 | tig0030275:-1618 | Msa1443000:CDS |
TAATCCACAAATTCAATCTC+AGG | 0.382370 | tig0030275:-4937 | Msa1443000:CDS |
GAAGCTGATGATGTCACTTT+AGG | 0.382907 | tig0030275:+4243 | None:intergenic |
CATAAGTTTCGCTCATCAAA+TGG | 0.382987 | tig0030275:-4772 | Msa1443000:CDS |
TGGGATTGAGAAGGTACATT+AGG | 0.383018 | tig0030275:+4549 | None:intergenic |
TTATCATCAACTTCAAGCTT+TGG | 0.383460 | tig0030275:+2599 | None:intergenic |
GGGCAGCGGTGGCCGCGCAC+CGG | 0.384081 | tig0030275:-7559 | Msa1443000:CDS |
TTCTAAATTTGGTCTATCCT+TGG | 0.385396 | tig0030275:+2907 | None:intergenic |
TGCCCATGTTGCCCATTTGA+TGG | 0.389885 | tig0030275:+4736 | None:intergenic |
GACCTGTCTACAGTTCTTCC+AGG | 0.390159 | tig0030275:+2401 | None:intergenic |
AATGCAATCTGGGGCACATC+AGG | 0.390407 | tig0030275:-2186 | Msa1443000:CDS |
ACAGATTCTGCTCAGTTAGA+TGG | 0.392624 | tig0030275:-2695 | Msa1443000:CDS |
GATTCAGATGCCTTTGCAAC+CGG | 0.393861 | tig0030275:+5948 | None:intergenic |
CTTCGTCACTCTCCTCTAAT+AGG | 0.395463 | tig0030275:-7536 | Msa1443000:CDS |
GCAGCTCATAATATAAACTA+TGG | 0.395927 | tig0030275:-764 | Msa1443000:three_prime_UTR |
AGATCTTCAGTGATAATTGC+AGG | 0.396361 | tig0030275:+3666 | None:intergenic |
TCATCAGTTGCCCCATCAAA+TGG | 0.396909 | tig0030275:-4748 | Msa1443000:CDS |
TCGTTGTCCACACTCAAATC+AGG | 0.397179 | tig0030275:+1804 | None:intergenic |
TTGATTTGAGAAGGAATAGA+TGG | 0.397789 | tig0030275:-1347 | Msa1443000:CDS |
AAAGGATCGCCCCACCATAT+TGG | 0.398443 | tig0030275:+2216 | None:intergenic |
GGACCGGCACCCATCCAATA+TGG | 0.402778 | tig0030275:-2230 | Msa1443000:CDS |
CCCTGCTGCTGGGGATATGG+AGG | 0.406085 | tig0030275:+4702 | None:intergenic |
TGCACAAGGTGGGCAATATA+GGG | 0.410112 | tig0030275:-6299 | Msa1443000:CDS |
TCACAGCCATCTTTACAGTT+TGG | 0.411169 | tig0030275:-4966 | Msa1443000:CDS |
GAAGGAATAGATGGCAAGTA+AGG | 0.411315 | tig0030275:-1338 | Msa1443000:CDS |
CACCTATTCACTTCAACACT+TGG | 0.411446 | tig0030275:+8211 | None:intergenic |
GAAGCAGCAATGGATTTAAC+AGG | 0.411491 | tig0030275:+4525 | None:intergenic |
TGCCAACTTCTGCTCACATC+TGG | 0.413815 | tig0030275:-1838 | Msa1443000:CDS |
GCCTCAACATCTTCCTCATC+AGG | 0.417737 | tig0030275:+1516 | None:intergenic |
AAGGCAAGAAGGCGCATGTT+AGG | 0.418141 | tig0030275:-1636 | Msa1443000:CDS |
GACCCCAAGGTGGTCTTGCT+AGG | 0.418455 | tig0030275:-994 | Msa1443000:three_prime_UTR |
GCTTCAGCAATGTGAGGAAT+AGG | 0.419383 | tig0030275:+4294 | None:intergenic |
GGTAGGATGGGTCGTGGTAT+GGG | 0.421407 | tig0030275:-1238 | Msa1443000:CDS |
AGCGCACATCGTATGGCAAT+AGG | 0.421752 | tig0030275:-856 | Msa1443000:three_prime_UTR |
AGTGAAAGAGAAACCAGAAT+TGG | 0.424484 | tig0030275:+8032 | None:intergenic |
CCTTGGTACCTGACACTGAA+TGG | 0.425315 | tig0030275:+2924 | None:intergenic |
AGATGCTGTGCAAGAGAGGC+AGG | 0.425404 | tig0030275:-1275 | Msa1443000:CDS |
ATACCCTTAGCAGGGCTTGT+AGG | 0.425992 | tig0030275:+5843 | None:intergenic |
CCTAGCGGTATTAATGGTTA+TGG | 0.426463 | tig0030275:-890 | Msa1443000:three_prime_UTR |
TATTCAGATGGTGGGTCATC+TGG | 0.426747 | tig0030275:-4585 | Msa1443000:CDS |
TTGTCTCCTACTTCTCCAAT+GGG | 0.428645 | tig0030275:-1157 | Msa1443000:CDS |
TTTCTGGGCCAATGCAATCT+GGG | 0.429683 | tig0030275:-2196 | Msa1443000:CDS |
CAATCGATCCAAACTGAAAA+GGG | 0.431664 | tig0030275:+5652 | None:intergenic |
CCCTCCATATCCCCAGCAGC+AGG | 0.433678 | tig0030275:-4703 | Msa1443000:CDS |
CCTGAGGAAAAGAAAGAAAC+TGG | 0.433929 | tig0030275:-2776 | Msa1443000:CDS |
TCATATCCAGCTGGACTTGA+AGG | 0.434008 | tig0030275:+800 | None:intergenic |
GTGACATCATCAGCTTCAAC+GGG | 0.434347 | tig0030275:-4237 | Msa1443000:CDS |
AGCCTTGTGCATCATCTGTA+AGG | 0.434837 | tig0030275:+2073 | None:intergenic |
GGCAACATGGGCATTGGCAC+CGG | 0.434881 | tig0030275:-4726 | Msa1443000:CDS |
AAACACCAAAATTGCCTCCT+TGG | 0.435651 | tig0030275:+2267 | None:intergenic |
GTTGTCTCCTACTTCTCCAA+TGG | 0.436455 | tig0030275:-1158 | Msa1443000:CDS |
CAGTGATAATTGCAGGAGAA+TGG | 0.436567 | tig0030275:+3673 | None:intergenic |
CACCCCTCTCAAATTCCTCC+TGG | 0.437600 | tig0030275:+1745 | None:intergenic |
TCATTACCCAAGGGTCTTTG+AGG | 0.437626 | tig0030275:+1031 | None:intergenic |
GCATCATCTGTAAGGGAGAC+TGG | 0.438292 | tig0030275:+2081 | None:intergenic |
GGTGGTCATGGAAGGGGCAG+CGG | 0.438433 | tig0030275:-7573 | Msa1443000:CDS |
GCAAGCTGATGAGTACTATT+GGG | 0.439035 | tig0030275:-1488 | Msa1443000:CDS |
GCTGCATCCTCCCAGTCATC+AGG | 0.439108 | tig0030275:+2635 | None:intergenic |
TCCCAAAGCTAAGGAACATA+TGG | 0.439443 | tig0030275:-1451 | Msa1443000:CDS |
TAATGCAAGAGATACTCATC+TGG | 0.439535 | tig0030275:-5102 | Msa1443000:CDS |
CCTGATGTGCATTCTGGCCC+TGG | 0.441608 | tig0030275:-929 | Msa1443000:three_prime_UTR |
TTCACAGGATAACTAAATAT+CGG | 0.442779 | tig0030275:+4390 | None:intergenic |
GGCATTCTGTGAGAGTCTCC+AGG | 0.446032 | tig0030275:+911 | None:intergenic |
TTGTTCCTGGTGTTATGAAT+GGG | 0.446763 | tig0030275:-5632 | Msa1443000:CDS |
ATGGTGGGGCGATCCTTTCT+GGG | 0.446954 | tig0030275:-2211 | Msa1443000:CDS |
GTCCCTCAGGTGGTCATGGA+AGG | 0.450408 | tig0030275:-7581 | Msa1443000:CDS |
CAACATGAATTTATCTTCTA+GGG | 0.451244 | tig0030275:-1394 | Msa1443000:CDS |
ATTAAGGTTAAGGTTAAGGT+TGG | 0.451688 | tig0030275:+8146 | None:intergenic |
TGCTGCTGCTTCGGAGCAGT+AGG | 0.452690 | tig0030275:+5161 | None:intergenic |
AGGTCAATCATCTGAAGATC+AGG | 0.453111 | tig0030275:-3887 | Msa1443000:intron |
TGTGAAAATTTGTGATTTGA+GGG | 0.453152 | tig0030275:-7709 | Msa1443000:five_prime_UTR |
TTGACTAACATACCCTTAGC+AGG | 0.453341 | tig0030275:+5834 | None:intergenic |
CCCTCAGGTGGTCATGGAAG+GGG | 0.454368 | tig0030275:-7579 | Msa1443000:CDS |
TTGTGAAAATTTGTGATTTG+AGG | 0.455563 | tig0030275:-7710 | Msa1443000:five_prime_UTR |
CCAGTTGCCAGCTTTGACAC+CGG | 0.459416 | tig0030275:-5057 | Msa1443000:CDS |
TTTCCGATTGGTATAGGCAT+TGG | 0.462124 | tig0030275:+4882 | None:intergenic |
ATTGTTCCTGGTGTTATGAA+TGG | 0.462317 | tig0030275:-5633 | Msa1443000:CDS |
CTTGTTAACGGAAGAGAACT+AGG | 0.462657 | tig0030275:+4441 | None:intergenic |
ACAATCGATCCAAACTGAAA+AGG | 0.463634 | tig0030275:+5651 | None:intergenic |
CGAGCAGCGTAAGTACTGTT+TGG | 0.463784 | tig0030275:+6247 | None:intergenic |
AATATCGGTGGCTGAGTGTT+GGG | 0.464841 | tig0030275:+4405 | None:intergenic |
TGGCTTGCCGGTGTCAAAGC+TGG | 0.465883 | tig0030275:+5050 | None:intergenic |
TAATTAATTGGCAAGGTCCT+AGG | 0.466014 | tig0030275:+1055 | None:intergenic |
GTTATCTGGCTACTTGTTAA+CGG | 0.466931 | tig0030275:+4429 | None:intergenic |
TAGGGTGAGATTTATGTTGA+AGG | 0.468736 | tig0030275:-1376 | Msa1443000:CDS |
TCAGTTGAATTCACTGGTGA+AGG | 0.469170 | tig0030275:+6271 | None:intergenic |
GCCCCTTCCATGACCACCTG+AGG | 0.473027 | tig0030275:+7578 | None:intergenic |
AAAATTTCCACCCTGCTGCT+GGG | 0.473719 | tig0030275:+4692 | None:intergenic |
TTAGCTCTTCATGCGTTTCA+GGG | 0.473728 | tig0030275:+4631 | None:intergenic |
TCAAACTGTCAAATGAAGAA+AGG | 0.475077 | tig0030275:-1674 | Msa1443000:CDS |
ACCCCAAGGTGGTCTTGCTA+GGG | 0.476492 | tig0030275:-993 | Msa1443000:three_prime_UTR |
TGGTTTGTTTCACTTCCTAC+AGG | 0.477508 | tig0030275:+3693 | None:intergenic |
GGTAATGAGTCTATAACATT+GGG | 0.477756 | tig0030275:-1016 | Msa1443000:exon |
TTTGAGGGATTATTCAGGAT+TGG | 0.477966 | tig0030275:-7694 | Msa1443000:five_prime_UTR |
AGAGCTAAGGCTTGATAAAA+GGG | 0.478379 | tig0030275:-4616 | Msa1443000:CDS |
GATGGCTGTGACTGCTGAAA+TGG | 0.478386 | tig0030275:+4978 | None:intergenic |
AATTATCCTCAAAGACCCTT+GGG | 0.479411 | tig0030275:-1037 | Msa1443000:CDS |
AAGGAATTAAACCCCTCTGC+TGG | 0.479561 | tig0030275:+2108 | None:intergenic |
CTTGGTACCTGACACTGAAT+GGG | 0.481026 | tig0030275:+2925 | None:intergenic |
TCGATGTCCCATTCAGTGTC+AGG | 0.482617 | tig0030275:-2932 | Msa1443000:CDS |
CTTCTGTTGTTCCTGTACCT+GGG | 0.484056 | tig0030275:-5016 | Msa1443000:CDS |
GGGTAATGAGTCTATAACAT+TGG | 0.485926 | tig0030275:-1017 | Msa1443000:exon |
TTCTGCTAGCTTCCAGCAGA+GGG | 0.486828 | tig0030275:-2120 | Msa1443000:CDS |
CCAGGGCCAGAATGCACATC+AGG | 0.486855 | tig0030275:+929 | None:intergenic |
GCCCATGTTGCCCATTTGAT+GGG | 0.489050 | tig0030275:+4737 | None:intergenic |
TAATTATCCTCAAAGACCCT+TGG | 0.490565 | tig0030275:-1038 | Msa1443000:CDS |
CGTTCCTACAAGCCCTGCTA+AGG | 0.493057 | tig0030275:-5847 | Msa1443000:CDS |
TTTGGCTCAGTTGAATTCAC+TGG | 0.496469 | tig0030275:+6265 | None:intergenic |
CTCCAGAAAGCAGATGCTGC+CGG | 0.496977 | tig0030275:-2833 | Msa1443000:CDS |
CGTGATTCACATCCTAGTCC+TGG | 0.497037 | tig0030275:-2419 | Msa1443000:CDS |
GCAGGGCTTGTAGGAACGGT+TGG | 0.499289 | tig0030275:+5852 | None:intergenic |
AATCTTCGAGAAGGCTCTGA+TGG | 0.499796 | tig0030275:-1883 | Msa1443000:CDS |
CAGCCATCTTTACAGTTTGG+CGG | 0.499905 | tig0030275:-4963 | Msa1443000:CDS |
GGTTGATGAGGCCGAGGGTG+AGG | 0.499924 | tig0030275:-1697 | Msa1443000:CDS |
AGAGGTCCCTCAGGTGGTCA+TGG | 0.500312 | tig0030275:-7585 | Msa1443000:CDS |
AGTTGATGATAAATCTCAGC+AGG | 0.502586 | tig0030275:-2588 | Msa1443000:CDS |
CCTATACCAATCGGAAATGT+TGG | 0.502665 | tig0030275:-4876 | Msa1443000:CDS |
CCTCATCCAATGCACTCTCA+TGG | 0.502876 | tig0030275:-4816 | Msa1443000:CDS |
TTATCTGAGCGCACATCGTA+TGG | 0.503958 | tig0030275:-863 | Msa1443000:three_prime_UTR |
ATCTGATGGGCCGGTTGCAA+AGG | 0.503961 | tig0030275:-5958 | Msa1443000:CDS |
GAAATAGCCCTGACGGGGAG+AGG | 0.504610 | tig0030275:-2151 | Msa1443000:CDS |
AGATGAGCAGAAGCGTGATC+AGG | 0.505549 | tig0030275:-5475 | Msa1443000:intron |
AGGATGTAATTGATTTGAGA+AGG | 0.507541 | tig0030275:-1356 | Msa1443000:CDS |
GGTCATGGAAGGGGCAGCGG+TGG | 0.507615 | tig0030275:-7570 | Msa1443000:CDS |
GTTACAACTGCATCATTCCT+AGG | 0.508047 | tig0030275:+5134 | None:intergenic |
GGAGCTGAGCTTGTACGAGC+AGG | 0.508215 | tig0030275:+5507 | None:intergenic |
AATTCTGGGCGTGGTTTGGA+TGG | 0.508941 | tig0030275:-2311 | Msa1443000:CDS |
CCCCTTCCATGACCACCTGA+GGG | 0.509286 | tig0030275:+7579 | None:intergenic |
GTTATTATTAAACAAATGCC+AGG | 0.509500 | tig0030275:-1763 | Msa1443000:CDS |
TCCCTCAGGTGGTCATGGAA+GGG | 0.509961 | tig0030275:-7580 | Msa1443000:CDS |
GAAGTTACTAGGTCAGTGTC+AGG | 0.511002 | tig0030275:-1541 | Msa1443000:CDS |
ATTGACGTATTTGAATTTGT+CGG | 0.511853 | tig0030275:+953 | None:intergenic |
TTAAGGTTGGTCAAGGTGGT+AGG | 0.511974 | tig0030275:+8159 | None:intergenic |
GGCATTGAAAGCCCAGGTAC+AGG | 0.512282 | tig0030275:+5005 | None:intergenic |
GACAGACCTTCAAGTCCAGC+TGG | 0.512927 | tig0030275:-806 | Msa1443000:three_prime_UTR |
CGTGGTTTGGATGGTAGTGG+TGG | 0.513269 | tig0030275:-2302 | Msa1443000:CDS |
GATCGCCCCACCATATTGGA+TGG | 0.513286 | tig0030275:+2220 | None:intergenic |
CATCATCTGTAAGGGAGACT+GGG | 0.513370 | tig0030275:+2082 | None:intergenic |
GCGCACATCGTATGGCAATA+GGG | 0.514554 | tig0030275:-855 | Msa1443000:three_prime_UTR |
CGGTGTCAAAGCTGGCAACT+GGG | 0.514945 | tig0030275:+5058 | None:intergenic |
TCCAGAAAGCAGATGCTGCC+GGG | 0.516890 | tig0030275:-2832 | Msa1443000:CDS |
TTTAAGGAATCCTCGTGGAC+CGG | 0.519228 | tig0030275:-2246 | Msa1443000:CDS |
TATGTTCCTTAGCTTTGGGA+TGG | 0.519532 | tig0030275:+1454 | None:intergenic |
CAAGTAAGGAGAAAAGTTGA+TGG | 0.520203 | tig0030275:-1324 | Msa1443000:CDS |
CCACCATATTGGATGGGTGC+CGG | 0.520545 | tig0030275:+2227 | None:intergenic |
ATCCTCCCAGTCATCAGGTT+CGG | 0.520734 | tig0030275:+2640 | None:intergenic |
AAATATCGGTGGCTGAGTGT+TGG | 0.520788 | tig0030275:+4404 | None:intergenic |
CGGTTGGTTCAGAGCTCACA+GGG | 0.521204 | tig0030275:+5868 | None:intergenic |
GCCCCATCAAATGGGCAACA+TGG | 0.521499 | tig0030275:-4739 | Msa1443000:CDS |
CAAACTGTCAAATGAAGAAA+GGG | 0.522430 | tig0030275:-1673 | Msa1443000:CDS |
CATCAGTTGCCCCATCAAAT+GGG | 0.522550 | tig0030275:-4747 | Msa1443000:CDS |
ACCAGAATTGGAAGAGATTG+TGG | 0.524634 | tig0030275:+8044 | None:intergenic |
CATCTACAGATGAACGACTA+CGG | 0.525388 | tig0030275:-646 | Msa1443000:three_prime_UTR |
GGTAGGATAGGAGCATCTGA+TGG | 0.525548 | tig0030275:-5972 | Msa1443000:intron |
AGCAATGGATTTAACAGGAT+GGG | 0.526055 | tig0030275:+4530 | None:intergenic |
TCTACAGTTCTTCCAGGACT+AGG | 0.526677 | tig0030275:+2407 | None:intergenic |
AGGATAACCAGAAGAAATCT+GGG | 0.526724 | tig0030275:-3915 | Msa1443000:CDS |
ACGCCCAGAATTAAAAGCAT+TGG | 0.527461 | tig0030275:+2322 | None:intergenic |
TGCTTCGGAGCAGTAGGGAT+TGG | 0.527476 | tig0030275:+5167 | None:intergenic |
TGACAGTTTGACCTCACCCT+CGG | 0.527902 | tig0030275:+1686 | None:intergenic |
TTCTGTGCAATCTCCTACAG+TGG | 0.530059 | tig0030275:-3772 | Msa1443000:CDS |
GAAAGTGAATCTACATCTGA+AGG | 0.530671 | tig0030275:-2734 | Msa1443000:CDS |
GAAGATCTTCTCACATCTGA+AGG | 0.531114 | tig0030275:-3651 | Msa1443000:CDS |
ACGGTTGGTTCAGAGCTCAC+AGG | 0.532153 | tig0030275:+5867 | None:intergenic |
TGCAAAGAAATAGCCCTGAC+GGG | 0.532173 | tig0030275:-2157 | Msa1443000:CDS |
CTGCTGGGGATATGGAGGGC+CGG | 0.533166 | tig0030275:+4707 | None:intergenic |
CAGCAATCAGAGAGTACTAC+AGG | 0.533715 | tig0030275:-610 | None:intergenic |
ATAAGTTTCGCTCATCAAAT+GGG | 0.533746 | tig0030275:-4771 | Msa1443000:CDS |
AAATAAGGTTGATGAGGCCG+AGG | 0.534130 | tig0030275:-1703 | Msa1443000:CDS |
ATGCCAATGCCTATACCAAT+CGG | 0.534416 | tig0030275:-4885 | Msa1443000:CDS |
CAAATGGGCAACATGGGCAT+TGG | 0.534467 | tig0030275:-4732 | Msa1443000:CDS |
CTCATCCAATGCACTCTCAT+GGG | 0.534843 | tig0030275:-4815 | Msa1443000:CDS |
AGAGAAGAACCAAGGCAAGA+AGG | 0.535181 | tig0030275:-1647 | Msa1443000:CDS |
GCTTTGATGAATTCCAATGT+TGG | 0.536108 | tig0030275:-2449 | Msa1443000:CDS |
CTTAGCAGGGCTTGTAGGAA+CGG | 0.536177 | tig0030275:+5848 | None:intergenic |
GCGTGAGGTGATGTTGCAAC+AGG | 0.536639 | tig0030275:+701 | None:intergenic |
TGTGACTGCTGAAATGGTGT+TGG | 0.537258 | tig0030275:+4984 | None:intergenic |
ACAGAGATGCTGTGCAAGAG+AGG | 0.539256 | tig0030275:-1279 | Msa1443000:CDS |
GCGAAACTTATGTTATGGCT+TGG | 0.540498 | tig0030275:+4783 | None:intergenic |
TCCTCTAGGACCAAAATCCA+TGG | 0.541530 | tig0030275:+1189 | None:intergenic |
GGAGTGCTGACTTTAGTAAC+GGG | 0.541592 | tig0030275:+4315 | None:intergenic |
CGAAGCAGCAGCAGCCACCT+AGG | 0.541855 | tig0030275:-5151 | Msa1443000:CDS |
CCCCATCAAATGGGCAACAT+GGG | 0.542174 | tig0030275:-4738 | Msa1443000:CDS |
TGTAAGGGAGACTGGGGAGA+AGG | 0.542942 | tig0030275:+2089 | None:intergenic |
TCAAGCACAAGTTGGTAGGA+TGG | 0.543349 | tig0030275:-1251 | Msa1443000:CDS |
AGCCAGATGTGAGCAGAAGT+TGG | 0.545065 | tig0030275:+1836 | None:intergenic |
ACACGAGGGAACCTGTTAGT+AGG | 0.546281 | tig0030275:-3951 | Msa1443000:CDS |
CAGATTGCATTGGCCCAGAA+AGG | 0.548035 | tig0030275:+2198 | None:intergenic |
TGATGTGCCCCAGATTGCAT+TGG | 0.548239 | tig0030275:+2188 | None:intergenic |
GCTGCTGCTTCGGAGCAGTA+GGG | 0.548616 | tig0030275:+5162 | None:intergenic |
AGGGATTGGCACTGAAGGCA+CGG | 0.549263 | tig0030275:+5181 | None:intergenic |
ACAGTAGTATATCTGATACT+GGG | 0.549589 | tig0030275:-3725 | Msa1443000:CDS |
AATCCACAAATTCAATCTCA+GGG | 0.549750 | tig0030275:-4936 | Msa1443000:CDS |
CACCTCACGCTCAGCCGCAA+GGG | 0.551606 | tig0030275:-688 | Msa1443000:three_prime_UTR |
TAAAGTGTCAGATGCAGAAG+AGG | 0.552033 | tig0030275:-2030 | Msa1443000:CDS |
AATCAGCAGAGAGGTCCCTC+AGG | 0.552288 | tig0030275:-7594 | Msa1443000:CDS |
ATCACGAGAATTACCAACAT+TGG | 0.554227 | tig0030275:+2436 | None:intergenic |
AGTGACATCATCAGCTTCAA+CGG | 0.554444 | tig0030275:-4238 | Msa1443000:CDS |
ATAAAGCCGAACCTGATGAC+TGG | 0.554900 | tig0030275:-2646 | Msa1443000:CDS |
CACCGGCAAGCCAGATGCAG+AGG | 0.555749 | tig0030275:-5040 | Msa1443000:CDS |
ATCTACAGATGAACGACTAC+GGG | 0.556428 | tig0030275:-645 | Msa1443000:three_prime_UTR |
CGGCACCCATCCAATATGGT+GGG | 0.556948 | tig0030275:-2226 | Msa1443000:CDS |
CTCCAATGGGTGGACCGCGT+GGG | 0.557376 | tig0030275:-1144 | Msa1443000:CDS |
GTTAAGGTTAAGGTTGGTCA+AGG | 0.557675 | tig0030275:+8152 | None:intergenic |
GATAGGAGCATCTGATGGGC+CGG | 0.558546 | tig0030275:-5967 | Msa1443000:intron |
TCTCCAATGGGTGGACCGCG+TGG | 0.559377 | tig0030275:-1145 | Msa1443000:CDS |
GGTCCACCCATTGGAGAAGT+AGG | 0.559708 | tig0030275:+1151 | None:intergenic |
AACTGTAGACAGGTCAAGGA+TGG | 0.560374 | tig0030275:-2393 | Msa1443000:CDS |
CCGGCACCCATCCAATATGG+TGG | 0.560436 | tig0030275:-2227 | Msa1443000:CDS |
TCACCTCACGCTCAGCCGCA+AGG | 0.561023 | tig0030275:-689 | Msa1443000:three_prime_UTR |
TTCTGGGCCAATGCAATCTG+GGG | 0.561037 | tig0030275:-2195 | Msa1443000:CDS |
CGAAGGCTGAGAAGCAGCAA+TGG | 0.561312 | tig0030275:+4515 | None:intergenic |
GTACTCTCTGATTGCTGACA+AGG | 0.561403 | tig0030275:+616 | None:intergenic |
AGGCTTGATAAAAGGGCAGA+TGG | 0.561761 | tig0030275:-4609 | Msa1443000:CDS |
GGACCGCCAAACTGTAAAGA+TGG | 0.561853 | tig0030275:+4960 | None:intergenic |
ACCTACATCAGCTGTGACTG+TGG | 0.562987 | tig0030275:-4007 | Msa1443000:CDS |
ATGGTGGGTCATCTGGTGCT+AGG | 0.563334 | tig0030275:-4578 | Msa1443000:CDS |
GGGATTGGCACTGAAGGCAC+GGG | 0.563348 | tig0030275:+5182 | None:intergenic |
CTTGAATGATCATATCCAGC+TGG | 0.564532 | tig0030275:+791 | None:intergenic |
GTCCTGGAAGAACTGTAGAC+AGG | 0.564617 | tig0030275:-2403 | Msa1443000:CDS |
CCTCTAGGACCAAAATCCAT+GGG | 0.564899 | tig0030275:+1190 | None:intergenic |
CCTGCTGCTGGGGATATGGA+GGG | 0.566335 | tig0030275:+4703 | None:intergenic |
TGAAGGATCTATTGCTGAAG+TGG | 0.566636 | tig0030275:-3634 | Msa1443000:CDS |
TTGAGGATAATTAATTGGCA+AGG | 0.566706 | tig0030275:+1048 | None:intergenic |
TTCCCCTAGCAAGACCACCT+TGG | 0.566765 | tig0030275:+990 | None:intergenic |
CAAGCACAAGTTGGTAGGAT+GGG | 0.567300 | tig0030275:-1250 | Msa1443000:CDS |
ACTATGGTAACAGAGACTTA+AGG | 0.567699 | tig0030275:-748 | Msa1443000:three_prime_UTR |
TTGTGGCTGAGGAAGACAAA+TGG | 0.570088 | tig0030275:-2355 | Msa1443000:CDS |
GACAACGCAATCACTCTCAC+TGG | 0.570146 | tig0030275:-1918 | Msa1443000:CDS |
AGAAGAAAATGTTGACAGAG+AGG | 0.570187 | tig0030275:-1584 | Msa1443000:CDS |
CAATGCATTACTCTTCCTGA+AGG | 0.571061 | tig0030275:-2500 | Msa1443000:CDS |
AAAGGCAATCTTATGAGCCT+AGG | 0.571641 | tig0030275:-1072 | Msa1443000:CDS |
GAAGAACTGTAGACAGGTCA+AGG | 0.571641 | tig0030275:-2397 | Msa1443000:CDS |
GGCCCTTGCGGCTGAGCGTG+AGG | 0.571726 | tig0030275:+686 | None:intergenic |
CAGTTGAATTCACTGGTGAA+GGG | 0.571781 | tig0030275:+6272 | None:intergenic |
GCATACATTTCACAGAAGGT+AGG | 0.574748 | tig0030275:+1858 | None:intergenic |
CAAACAGTACTTACGCTGCT+CGG | 0.575193 | tig0030275:-6246 | Msa1443000:CDS |
AGGTGGATAATAGGGAGGAC+TGG | 0.575283 | tig0030275:+4464 | None:intergenic |
TTCTGCTCATCTAAATTAGG+AGG | 0.575785 | tig0030275:+5486 | None:intergenic |
TCCTGATGAGGAAGATGTTG+AGG | 0.576359 | tig0030275:-1517 | Msa1443000:CDS |
TGAGAGACAATTGGCCCTTG+CGG | 0.576384 | tig0030275:+674 | None:intergenic |
TGTTGGACAAGTGCAACAGC+CGG | 0.576827 | tig0030275:-4859 | Msa1443000:CDS |
ATTGGATGAGGCTGAAGACC+TGG | 0.577000 | tig0030275:+4828 | None:intergenic |
GAAACAATCAATCTGCAAGA+AGG | 0.578155 | tig0030275:-1216 | Msa1443000:CDS |
GTTGGCATACATTTCACAGA+AGG | 0.578221 | tig0030275:+1854 | None:intergenic |
AATGCAAGAGATACTCATCT+GGG | 0.579432 | tig0030275:-5101 | Msa1443000:CDS |
CCATGAGAGTGCATTGGATG+AGG | 0.579533 | tig0030275:+4816 | None:intergenic |
GGGTGAAAGAGAACAAGAAG+AGG | 0.579865 | tig0030275:-1727 | Msa1443000:CDS |
TTTAGTTATCCTGTGAACAA+TGG | 0.580559 | tig0030275:-4384 | Msa1443000:CDS |
AGGCAGGCTCAAGCACAAGT+TGG | 0.580612 | tig0030275:-1259 | Msa1443000:CDS |
ACTTGTCCAACATTTCCGAT+TGG | 0.581212 | tig0030275:+4870 | None:intergenic |
ATGCAAAGAAATAGCCCTGA+CGG | 0.581347 | tig0030275:-2158 | Msa1443000:CDS |
CAGTAGTATATCTGATACTG+GGG | 0.581649 | tig0030275:-3724 | Msa1443000:CDS |
AGGACTGGAACTATATGAGC+CGG | 0.582821 | tig0030275:+4479 | None:intergenic |
GGGCGTGGTTTGGATGGTAG+TGG | 0.583255 | tig0030275:-2305 | Msa1443000:CDS |
AAATTTCCACCCTGCTGCTG+GGG | 0.583323 | tig0030275:+4693 | None:intergenic |
TGTTTCACTTCCTACAGGTG+TGG | 0.584021 | tig0030275:+3698 | None:intergenic |
ATATGGATGTATATTTCGAA+AGG | 0.584216 | tig0030275:-1434 | Msa1443000:CDS |
TTCCAAGTGTTGAAGTGAAT+AGG | 0.585646 | tig0030275:-8213 | Msa1443000:five_prime_UTR |
CTGAAACGCATGAAGAGCTA+AGG | 0.586019 | tig0030275:-4629 | Msa1443000:CDS |
GGTGGATTTCGACATGGCCA+AGG | 0.586237 | tig0030275:-2284 | Msa1443000:CDS |
CCATTCAGTGTCAGGTACCA+AGG | 0.586636 | tig0030275:-2924 | Msa1443000:CDS |
AACGGAAGAGAACTAGGAGG+TGG | 0.586669 | tig0030275:+4447 | None:intergenic |
AAGGTTAAGGTTGGTCAAGG+TGG | 0.589397 | tig0030275:+8155 | None:intergenic |
TAGTAGGTCCAACTCTTCAA+AGG | 0.589991 | tig0030275:-3935 | Msa1443000:CDS |
AGGAGTGCTGACTTTAGTAA+CGG | 0.592122 | tig0030275:+4314 | None:intergenic |
CATTGGCATAGGAATATGCA+TGG | 0.592369 | tig0030275:+4899 | None:intergenic |
TCACGAGAACGTTCTGCAGT+GGG | 0.592815 | tig0030275:+4270 | None:intergenic |
CATGTACAACCGCAGATGCA+TGG | 0.592993 | tig0030275:-6205 | Msa1443000:intron |
AGGCTCAAGCACAAGTTGGT+AGG | 0.593468 | tig0030275:-1255 | Msa1443000:CDS |
CAGCAATGGATTTAACAGGA+TGG | 0.593503 | tig0030275:+4529 | None:intergenic |
GAGACTTAAGGAATGATGAT+CGG | 0.593938 | tig0030275:-736 | Msa1443000:three_prime_UTR |
ATAAAGATCAGAAGTTGTCC+CGG | 0.593989 | tig0030275:+2814 | None:intergenic |
CGTCACTCTCCTCTAATAGG+AGG | 0.594141 | tig0030275:-7533 | Msa1443000:intron |
ATCTAACTGAGCAGAATCTG+TGG | 0.594455 | tig0030275:+2697 | None:intergenic |
ACTAACAGGTTCCCTCGTGT+TGG | 0.594526 | tig0030275:+3954 | None:intergenic |
ATAGCCCTGACGGGGAGAGG+TGG | 0.594575 | tig0030275:-2148 | Msa1443000:CDS |
GCAGATGGATATTCAGATGG+TGG | 0.594673 | tig0030275:-4594 | Msa1443000:CDS |
GCAGTAGGGATTGGCACTGA+AGG | 0.594805 | tig0030275:+5176 | None:intergenic |
AATTACGGCAGACATAGCTC+AGG | 0.595778 | tig0030275:-2471 | Msa1443000:CDS |
GCTGCTCGGACCATGCATAA+CGG | 0.598341 | tig0030275:-6232 | Msa1443000:CDS |
ATGCCAGGAGGAATTTGAGA+GGG | 0.598754 | tig0030275:-1748 | Msa1443000:CDS |
TGTTATAGACTCATTACCCA+AGG | 0.601108 | tig0030275:+1021 | None:intergenic |
CCGTGGGAATGTTGTGGCTG+AGG | 0.601152 | tig0030275:-2366 | Msa1443000:CDS |
ATTGGTATAGGCATTGGCAT+AGG | 0.602652 | tig0030275:+4888 | None:intergenic |
TCAAAATCCCGAAACCTCCT+CGG | 0.602912 | tig0030275:-4136 | Msa1443000:CDS |
ACAGCATTCTAAATCTTCTG+AGG | 0.602969 | tig0030275:-4103 | Msa1443000:CDS |
TCTCCTACTTCTCCAATGGG+TGG | 0.603108 | tig0030275:-1154 | Msa1443000:CDS |
TCTATAACATTGGGACCCCA+AGG | 0.604923 | tig0030275:-1007 | Msa1443000:exon |
GATTGACCATCCCAAAGCTA+AGG | 0.604981 | tig0030275:-1460 | Msa1443000:CDS |
GGTGTCAAAGCTGGCAACTG+GGG | 0.605147 | tig0030275:+5059 | None:intergenic |
AGTCTAATAATGCACAAGGT+GGG | 0.605222 | tig0030275:-6309 | Msa1443000:CDS |
ATCGCCCCACCATATTGGAT+GGG | 0.605579 | tig0030275:+2221 | None:intergenic |
TAAAGCCGAACCTGATGACT+GGG | 0.605622 | tig0030275:-2645 | Msa1443000:CDS |
CAAGTTGGTAGGATGGGTCG+TGG | 0.606981 | tig0030275:-1244 | Msa1443000:CDS |
TGACTAACATACCCTTAGCA+GGG | 0.607562 | tig0030275:+5835 | None:intergenic |
GCCTTGTGCATCATCTGTAA+GGG | 0.609387 | tig0030275:+2074 | None:intergenic |
CTGTGTAGAGATTTCCGAGG+AGG | 0.609780 | tig0030275:+4122 | None:intergenic |
CAGATGGATATTCAGATGGT+GGG | 0.609855 | tig0030275:-4593 | Msa1443000:CDS |
TTCACGAGAACGTTCTGCAG+TGG | 0.610096 | tig0030275:+4269 | None:intergenic |
CCTCCATATCCCCAGCAGCA+GGG | 0.610567 | tig0030275:-4702 | Msa1443000:CDS |
GGTGTTGGCATTGAAAGCCC+AGG | 0.611152 | tig0030275:+4999 | None:intergenic |
CCAGGTACAGGAACAACAGA+AGG | 0.613768 | tig0030275:+5017 | None:intergenic |
CCCCAAGGTGGTCTTGCTAG+GGG | 0.614624 | tig0030275:-992 | Msa1443000:three_prime_UTR |
GCCACCCCATTCATAACACC+AGG | 0.616026 | tig0030275:+5627 | None:intergenic |
AGGGCAGATGGATATTCAGA+TGG | 0.617264 | tig0030275:-4597 | Msa1443000:CDS |
GTAGGATAGGAGCATCTGAT+GGG | 0.618087 | tig0030275:-5971 | Msa1443000:intron |
GGCACCCATCCAATATGGTG+GGG | 0.618695 | tig0030275:-2225 | Msa1443000:CDS |
TTAACAGGATGGGATTGAGA+AGG | 0.619016 | tig0030275:+4540 | None:intergenic |
CATCTCACAAATCTTCGAGA+AGG | 0.619530 | tig0030275:-1892 | Msa1443000:CDS |
ATGCAATCTGGGGCACATCA+GGG | 0.620155 | tig0030275:-2185 | Msa1443000:CDS |
TACATGAGTACCGTTATGCA+TGG | 0.620267 | tig0030275:+6222 | None:intergenic |
GCATTCTGTGAGAGTCTCCA+GGG | 0.620386 | tig0030275:+912 | None:intergenic |
GAGTGTATAAAGAAGTTACT+AGG | 0.621779 | tig0030275:-1552 | Msa1443000:CDS |
GACATCATCAGCTTCAACGG+GGG | 0.621980 | tig0030275:-4235 | Msa1443000:CDS |
ACTGGGGTTTCCACACCTGT+AGG | 0.622024 | tig0030275:-3708 | Msa1443000:CDS |
CTAATAATGAAGCCAACACG+AGG | 0.625659 | tig0030275:-3966 | Msa1443000:CDS |
GTTCTGCTAGCTTCCAGCAG+AGG | 0.627194 | tig0030275:-2121 | Msa1443000:CDS |
TTAGAGGAGAGTGACGAAGC+CGG | 0.627489 | tig0030275:+7540 | None:intergenic |
AAGGGAGCAGAGAAGAACCA+AGG | 0.628760 | tig0030275:-1655 | Msa1443000:CDS |
CCGGAAGGATAATAATTCGA+AGG | 0.630610 | tig0030275:+4498 | None:intergenic |
TCCACAGTCACAGCTGATGT+AGG | 0.630655 | tig0030275:+4006 | None:intergenic |
AGAGTGACGAAGCCGGTGCG+CGG | 0.631295 | tig0030275:+7547 | None:intergenic |
GTTCCTACAAGCCCTGCTAA+GGG | 0.635120 | tig0030275:-5846 | Msa1443000:intron |
CCATAACCATTAATACCGCT+AGG | 0.637719 | tig0030275:+890 | None:intergenic |
CCCATGTTGCCCATTTGATG+GGG | 0.640875 | tig0030275:+4738 | None:intergenic |
GTTGGTTCAGAGCTCACAGG+GGG | 0.641318 | tig0030275:+5870 | None:intergenic |
ATCTGCAAGAAGGAACCCCA+TGG | 0.642895 | tig0030275:-1206 | Msa1443000:CDS |
GAAAGTGAGACAGACAAGAG+AGG | 0.642911 | tig0030275:+8108 | None:intergenic |
ATCATCCCATGAGAGTGCAT+TGG | 0.643200 | tig0030275:+4810 | None:intergenic |
GCTAGGGGAATGTCCAGTAG+AGG | 0.643958 | tig0030275:-977 | Msa1443000:three_prime_UTR |
TCCTGGTGTTATGAATGGGG+TGG | 0.644250 | tig0030275:-5628 | Msa1443000:CDS |
AGAGGCAAATAAGGTTGATG+AGG | 0.644395 | tig0030275:-1709 | Msa1443000:CDS |
CAGCAGAGAGGTCCCTCAGG+TGG | 0.646154 | tig0030275:-7591 | Msa1443000:CDS |
GGAACACCGTGGGAATGTTG+TGG | 0.646368 | tig0030275:-2372 | Msa1443000:CDS |
TGAGTTACCTGATTTGAGTG+TGG | 0.651899 | tig0030275:-1811 | Msa1443000:CDS |
AATGCCAGGAGGAATTTGAG+AGG | 0.653051 | tig0030275:-1749 | Msa1443000:CDS |
AAGTCTAATAATGCACAAGG+TGG | 0.655622 | tig0030275:-6310 | Msa1443000:CDS |
TGTTCCTGGTGTTATGAATG+GGG | 0.655675 | tig0030275:-5631 | Msa1443000:CDS |
ATGCAGAAGAGGCAAAGCAG+AGG | 0.657893 | tig0030275:-2019 | Msa1443000:CDS |
AAGATAGACGAATCATCCGA+AGG | 0.658876 | tig0030275:-3582 | Msa1443000:intron |
GGTGCAGTAAGCGAGAAAAG+TGG | 0.660107 | tig0030275:-2674 | Msa1443000:CDS |
GGATTTCGACATGGCCAAGG+AGG | 0.662285 | tig0030275:-2281 | Msa1443000:CDS |
GGTCAAGGATGGAACACCGT+GGG | 0.662618 | tig0030275:-2382 | Msa1443000:CDS |
ATGCAAGAGATACTCATCTG+GGG | 0.663739 | tig0030275:-5100 | Msa1443000:CDS |
TGCAAGAGATACTCATCTGG+GGG | 0.664072 | tig0030275:-5099 | Msa1443000:CDS |
TCAGTGTCAGGATCCTGATG+AGG | 0.670181 | tig0030275:-1529 | Msa1443000:CDS |
GCAAAGAAATAGCCCTGACG+GGG | 0.670336 | tig0030275:-2156 | Msa1443000:CDS |
GACTGCATACTAGCCACTGT+AGG | 0.671150 | tig0030275:+3759 | None:intergenic |
TAATGCATATAAAGGACCTG+AGG | 0.671929 | tig0030275:-2792 | Msa1443000:CDS |
TAAAGCTTACCATGCATCTG+CGG | 0.672233 | tig0030275:+6196 | None:intergenic |
TGCCAGGAGGAATTTGAGAG+GGG | 0.673299 | tig0030275:-1747 | Msa1443000:CDS |
TGGATGGGTGCCGGTCCACG+AGG | 0.674239 | tig0030275:+2236 | None:intergenic |
CCTCAGCCACAACATTCCCA+CGG | 0.674666 | tig0030275:+2366 | None:intergenic |
AAGAAGTCTAATAATGCACA+AGG | 0.677099 | tig0030275:-6313 | Msa1443000:CDS |
GTGGGAGCTTCAGCAATGTG+AGG | 0.678263 | tig0030275:+4288 | None:intergenic |
GTTATAGACTCATTACCCAA+GGG | 0.679443 | tig0030275:+1022 | None:intergenic |
GGAGAAGTAGGAGACAACAT+AGG | 0.679603 | tig0030275:+1163 | None:intergenic |
AGAATTGGAAGAGATTGTGG+AGG | 0.679675 | tig0030275:+8047 | None:intergenic |
ATCATCTGTAAGGGAGACTG+GGG | 0.679702 | tig0030275:+2083 | None:intergenic |
TCTGTGACCATTAAACCAAG+TGG | 0.680043 | tig0030275:-4210 | Msa1443000:CDS |
GTAACAGCAGAAACACCACT+TGG | 0.680167 | tig0030275:+4195 | None:intergenic |
GGTAGTGGTGGATTTCGACA+TGG | 0.680475 | tig0030275:-2290 | Msa1443000:CDS |
ACAGGATAACTAAATATCGG+TGG | 0.680582 | tig0030275:+4393 | None:intergenic |
TCTGCTAGCTTCCAGCAGAG+GGG | 0.681272 | tig0030275:-2119 | Msa1443000:CDS |
CAAGCTGATGAGTACTATTG+GGG | 0.684037 | tig0030275:-1487 | Msa1443000:CDS |
ATTATTAAACAAATGCCAGG+AGG | 0.684132 | tig0030275:-1760 | Msa1443000:CDS |
TGTCTCAGGAGATACATCAA+AGG | 0.684325 | tig0030275:-5679 | Msa1443000:intron |
CCATATCCCCAGCAGCAGGG+TGG | 0.685505 | tig0030275:-4699 | Msa1443000:CDS |
GACAACATAGGTGATCCTCT+AGG | 0.687510 | tig0030275:+1175 | None:intergenic |
ATTGGCATAGGAATATGCAT+GGG | 0.687946 | tig0030275:+4900 | None:intergenic |
CTGGAACTATATGAGCCGGA+AGG | 0.689773 | tig0030275:+4483 | None:intergenic |
AGCCGAACCTGATGACTGGG+AGG | 0.690100 | tig0030275:-2642 | Msa1443000:CDS |
CTAGGAGGTGGATAATAGGG+AGG | 0.691824 | tig0030275:+4459 | None:intergenic |
AATAAGGTTGATGAGGCCGA+GGG | 0.692298 | tig0030275:-1702 | Msa1443000:CDS |
TCCCTTACAGATGATGCACA+AGG | 0.695376 | tig0030275:-2075 | Msa1443000:CDS |
CAATCTGGGGCACATCAGGG+TGG | 0.695868 | tig0030275:-2182 | Msa1443000:CDS |
ATCCACAAATTCAATCTCAG+GGG | 0.697078 | tig0030275:-4935 | Msa1443000:CDS |
ACAACTGCATCATTCCTAGG+TGG | 0.705940 | tig0030275:+5137 | None:intergenic |
GGGCTGTCTACTCAAACACG+TGG | 0.706624 | tig0030275:-1124 | Msa1443000:CDS |
GACTCTCACAGAATGCCTAG+CGG | 0.707027 | tig0030275:-905 | Msa1443000:three_prime_UTR |
TGACATCATCAGCTTCAACG+GGG | 0.707705 | tig0030275:-4236 | Msa1443000:CDS |
CACATCGTATGGCAATAGGG+AGG | 0.708553 | tig0030275:-852 | Msa1443000:three_prime_UTR |
TAATAATGAAGCCAACACGA+GGG | 0.712795 | tig0030275:-3965 | Msa1443000:CDS |
CTGAATCAACAGCTGCACAG+AGG | 0.714898 | tig0030275:-5932 | Msa1443000:CDS |
CTCTAGGACCAAAATCCATG+GGG | 0.717738 | tig0030275:+1191 | None:intergenic |
TCTAGCTTTAATCAGCAGAG+AGG | 0.720781 | tig0030275:-7603 | Msa1443000:CDS |
TGATTTACCAGAAACAACCA+AGG | 0.732627 | tig0030275:-2990 | Msa1443000:CDS |
ATAACATTGGGACCCCAAGG+TGG | 0.734587 | tig0030275:-1004 | Msa1443000:exon |
CCCCTAGCAAGACCACCTTG+GGG | 0.738262 | tig0030275:+992 | None:intergenic |
ATGCTGTGTAGAGATTTCCG+AGG | 0.748315 | tig0030275:+4119 | None:intergenic |
AGGTCAAGGATGGAACACCG+TGG | 0.771324 | tig0030275:-2383 | Msa1443000:CDS |
GTTAACGGAAGAGAACTAGG+AGG | 0.786496 | tig0030275:+4444 | None:intergenic |
GGTTGGTTCAGAGCTCACAG+GGG | 0.793640 | tig0030275:+5869 | None:intergenic |
GTTTGAGTAGACAGCCCACG+CGG | 0.802247 | tig0030275:+1130 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAAATAATCAATAAAAT+AGG | + | tig0030275:2489-2508 | None:intergenic | 10.0% |
!!! | TTATTTTTAACACAATATTT+TGG | - | tig0030275:4989-5008 | Msa1443000:CDS | 10.0% |
!!! | ATAATTGTGTATGATTTTAA+CGG | - | tig0030275:1023-1042 | Msa1443000:CDS | 15.0% |
!! | TTCAATTAAAACACATATAA+TGG | + | tig0030275:1356-1375 | None:intergenic | 15.0% |
!!! | TTTTAAGACAAAGTTTATAT+TGG | + | tig0030275:2183-2202 | None:intergenic | 15.0% |
!!! | TTTGTGAAAATTTACTATTT+TGG | - | tig0030275:2336-2355 | Msa1443000:CDS | 15.0% |
!!! | CATGAGTTTTTATTTAATTT+TGG | - | tig0030275:2669-2688 | Msa1443000:CDS | 15.0% |
!!! | TTTTTAGAAAAACTAAGATA+CGG | - | tig0030275:5475-5494 | Msa1443000:intron | 15.0% |
!!! | ATTTTAGAAAAACTAAGATA+CGG | - | tig0030275:5587-5606 | Msa1443000:intron | 15.0% |
!! | TACCTTAAAAGTTGAAATTA+GGG | + | tig0030275:924-943 | None:intergenic | 20.0% |
!!! | TATGATTTTAACGGTTTTAA+TGG | - | tig0030275:1032-1051 | Msa1443000:CDS | 20.0% |
!!! | TTTTGATGAATTGTGAATAA+TGG | - | tig0030275:1405-1424 | Msa1443000:CDS | 20.0% |
!! | TTTGATGAATTGTGAATAAT+GGG | - | tig0030275:1406-1425 | Msa1443000:CDS | 20.0% |
!!! | AATTTGTGTGTATTTTATAC+AGG | - | tig0030275:1494-1513 | Msa1443000:CDS | 20.0% |
!!! | ATTTGTGTGTATTTTATACA+GGG | - | tig0030275:1495-1514 | Msa1443000:CDS | 20.0% |
!!! | AAATCACTTTTGTGTATATT+TGG | - | tig0030275:1523-1542 | Msa1443000:CDS | 20.0% |
!!! | AAAATTGATTTTGAGTGAAT+TGG | - | tig0030275:1559-1578 | Msa1443000:CDS | 20.0% |
!!! | AATTTGTGTGTATTTTACAT+AGG | - | tig0030275:1678-1697 | Msa1443000:CDS | 20.0% |
!!! | ATTTGTGTGTATTTTACATA+GGG | - | tig0030275:1679-1698 | Msa1443000:CDS | 20.0% |
!!! | CATAAAAGTGATTTTATTAC+CGG | + | tig0030275:2043-2062 | None:intergenic | 20.0% |
!! | AATACATATACATATGACAA+AGG | - | tig0030275:2124-2143 | Msa1443000:CDS | 20.0% |
!! | ATACATATACATATGACAAA+GGG | - | tig0030275:2125-2144 | Msa1443000:CDS | 20.0% |
!!! | GATATTATGTAATTTGTCTT+AGG | + | tig0030275:2311-2330 | None:intergenic | 20.0% |
!! | ACATATTATTGCTAAATGTA+TGG | - | tig0030275:3248-3267 | Msa1443000:intron | 20.0% |
!! | TCTATAACTATACAAAAGTA+CGG | + | tig0030275:3431-3450 | None:intergenic | 20.0% |
!! | AGTTTAAGAAAATAGAAATC+AGG | + | tig0030275:3613-3632 | None:intergenic | 20.0% |
!!! | TTCTATTTTCTTAAACTTTC+AGG | - | tig0030275:3616-3635 | Msa1443000:CDS | 20.0% |
!!! | TTTTAGAAAAACTAAGATAC+GGG | - | tig0030275:5476-5495 | Msa1443000:CDS | 20.0% |
!!! | ATAAGATACAAGATGAATTT+TGG | - | tig0030275:5571-5590 | Msa1443000:intron | 20.0% |
!! | GATCTTTATAATGCATATAA+AGG | - | tig0030275:6041-6060 | Msa1443000:intron | 20.0% |
!! | AACCCTAATTTCAACTTTTA+AGG | - | tig0030275:919-938 | Msa1443000:three_prime_UTR | 25.0% |
! | GTACCTTAAAAGTTGAAATT+AGG | + | tig0030275:925-944 | None:intergenic | 25.0% |
!!! | TTTCGTGACAATTTTTCAAT+TGG | - | tig0030275:984-1003 | Msa1443000:three_prime_UTR | 25.0% |
!!! | TTCGTGACAATTTTTCAATT+GGG | - | tig0030275:985-1004 | Msa1443000:three_prime_UTR | 25.0% |
!! | TCAATTGGGTTTTCAATTAA+CGG | - | tig0030275:999-1018 | Msa1443000:three_prime_UTR | 25.0% |
! | TTGTGAAAATTTGTGATTTG+AGG | - | tig0030275:1131-1150 | Msa1443000:CDS | 25.0% |
! | TGTGAAAATTTGTGATTTGA+GGG | - | tig0030275:1132-1151 | Msa1443000:CDS | 25.0% |
! | TTTGAATTGTGTAATAGTGT+TGG | - | tig0030275:1433-1452 | Msa1443000:CDS | 25.0% |
! | TTTGTGTATATTTGGTTATG+CGG | - | tig0030275:1531-1550 | Msa1443000:CDS | 25.0% |
!!! | TGGTTTTGTTAAATTGATTC+TGG | - | tig0030275:1579-1598 | Msa1443000:CDS | 25.0% |
! | AAGGTAAAGTGATTTATGTT+TGG | - | tig0030275:1629-1648 | Msa1443000:CDS | 25.0% |
! | AAAGTGATTTATGTTTGGAT+TGG | - | tig0030275:1634-1653 | Msa1443000:CDS | 25.0% |
! | AAGTGATTTATGTTTGGATT+GGG | - | tig0030275:1635-1654 | Msa1443000:CDS | 25.0% |
! | CACATTTACAATTTCATGAT+TGG | + | tig0030275:1733-1752 | None:intergenic | 25.0% |
! | TTCGGTATTTCTTAAATTTG+AGG | + | tig0030275:1767-1786 | None:intergenic | 25.0% |
!!! | CGGTAATAAAATCACTTTTA+TGG | - | tig0030275:2041-2060 | Msa1443000:CDS | 25.0% |
!!! | CTTTTATGGTCTTTATTTGA+TGG | - | tig0030275:2055-2074 | Msa1443000:CDS | 25.0% |
!! | TCAAGCATTTTATCTTAATC+TGG | + | tig0030275:2104-2123 | None:intergenic | 25.0% |
! | AATCAATAAAATAGGAACAG+AGG | + | tig0030275:2481-2500 | None:intergenic | 25.0% |
!! | TTTTAGTGTCTGGTAAATTA+TGG | - | tig0030275:2813-2832 | Msa1443000:CDS | 25.0% |
!! | ATGTAATTCATTAGTTTACG+TGG | - | tig0030275:2848-2867 | Msa1443000:CDS | 25.0% |
!!! | TTTTTTGTTACTCGTAGATT+GGG | - | tig0030275:3047-3066 | Msa1443000:intron | 25.0% |
!!! | ACGTGTTTTATTGAATTGTA+AGG | - | tig0030275:3276-3295 | Msa1443000:intron | 25.0% |
! | TAGTATTCATATCATTCCTT+CGG | + | tig0030275:3479-3498 | None:intergenic | 25.0% |
! | TTCACAGGATAACTAAATAT+CGG | + | tig0030275:4454-4473 | None:intergenic | 25.0% |
! | TTGACTAATTCTAGTATTTG+TGG | - | tig0030275:4679-4698 | Msa1443000:CDS | 25.0% |
!!! | TTAACACAATATTTTGGTCT+TGG | - | tig0030275:4995-5014 | Msa1443000:CDS | 25.0% |
! | TTAATAGTAATGCTTACCTT+CGG | + | tig0030275:5278-5297 | None:intergenic | 25.0% |
!! | ACCAAATTTAGAACCAAATA+AGG | - | tig0030275:5944-5963 | Msa1443000:CDS | 25.0% |
!!! | TTTCCAATGCTTTTAATTCT+GGG | - | tig0030275:6516-6535 | Msa1443000:intron | 25.0% |
!! | AAAAGTCTATCGAAATTTTG+AGG | + | tig0030275:6878-6897 | None:intergenic | 25.0% |
!! | ACGAAAAGATAACTTTTAAG+AGG | - | tig0030275:7056-7075 | Msa1443000:intron | 25.0% |
! | GTTATTATTAAACAAATGCC+AGG | - | tig0030275:7078-7097 | Msa1443000:intron | 25.0% |
! | ATATGGATGTATATTTCGAA+AGG | - | tig0030275:7407-7426 | Msa1443000:intron | 25.0% |
! | ACAACATGAATTTATCTTCT+AGG | - | tig0030275:7446-7465 | Msa1443000:intron | 25.0% |
! | CAACATGAATTTATCTTCTA+GGG | - | tig0030275:7447-7466 | Msa1443000:intron | 25.0% |
! | ATTGACGTATTTGAATTTGT+CGG | + | tig0030275:7891-7910 | None:intergenic | 25.0% |
ATTAAGGTTAAGGTTAAGGT+TGG | + | tig0030275:698-717 | None:intergenic | 30.0% | |
GAAGATTAAGGTTAAGGTTA+AGG | + | tig0030275:702-721 | None:intergenic | 30.0% | |
GTTAATGTGTGTGAAGATTA+AGG | + | tig0030275:714-733 | None:intergenic | 30.0% | |
!! | TTTTAATGGATCTGCGTTTT+TGG | - | tig0030275:1046-1065 | Msa1443000:CDS | 30.0% |
!! | TTTAATGGATCTGCGTTTTT+GGG | - | tig0030275:1047-1066 | Msa1443000:CDS | 30.0% |
ACGCCTATTATCAAAAATCT+GGG | - | tig0030275:1209-1228 | Msa1443000:CDS | 30.0% | |
!! | GAAAATTCAAAGGAGCATTT+CGG | + | tig0030275:1785-1804 | None:intergenic | 30.0% |
ACTGAAGTTGGAAAATTCAA+AGG | + | tig0030275:1795-1814 | None:intergenic | 30.0% | |
TTGAACAATTTGACTGAAGT+TGG | + | tig0030275:1807-1826 | None:intergenic | 30.0% | |
!! | TTTGGTGTTTCGTAAATTTC+AGG | - | tig0030275:1966-1985 | Msa1443000:CDS | 30.0% |
AAACTACATGCAACAAAACA+AGG | + | tig0030275:2385-2404 | None:intergenic | 30.0% | |
ATAAAATAGGAACAGAGGAA+GGG | + | tig0030275:2476-2495 | None:intergenic | 30.0% | |
AATAAAATAGGAACAGAGGA+AGG | + | tig0030275:2477-2496 | None:intergenic | 30.0% | |
ATTAGACTTCTTGCTTAAAC+TGG | + | tig0030275:2520-2539 | None:intergenic | 30.0% | |
AAGAAGTCTAATAATGCACA+AGG | - | tig0030275:2528-2547 | Msa1443000:CDS | 30.0% | |
TATCTGATTCTTCTCTTCAT+TGG | - | tig0030275:2694-2713 | Msa1443000:CDS | 30.0% | |
!!! | TTCTTCTCTTCATTGGTTTT+TGG | - | tig0030275:2701-2720 | Msa1443000:CDS | 30.0% |
! | AATTCATTAGTTTACGTGGT+AGG | - | tig0030275:2852-2871 | Msa1443000:CDS | 30.0% |
ATCTACGAGTAACAAAAAAC+AGG | + | tig0030275:3046-3065 | None:intergenic | 30.0% | |
!!! | GTTTTTTGTTACTCGTAGAT+TGG | - | tig0030275:3046-3065 | Msa1443000:intron | 30.0% |
TGAATATTTATGTCTGTCTC+AGG | - | tig0030275:3148-3167 | Msa1443000:intron | 30.0% | |
! | GTATTCACCTCTATTCTTTT+TGG | - | tig0030275:3388-3407 | Msa1443000:intron | 30.0% |
!!! | ATCTCTTGCATTAGTTTTCT+CGG | + | tig0030275:3732-3751 | None:intergenic | 30.0% |
TGAGATTGAATTTGTGGATT+AGG | + | tig0030275:3905-3924 | None:intergenic | 30.0% | |
TAATCCACAAATTCAATCTC+AGG | - | tig0030275:3904-3923 | Msa1443000:CDS | 30.0% | |
AATCCACAAATTCAATCTCA+GGG | - | tig0030275:3905-3924 | Msa1443000:CDS | 30.0% | |
ATAAGTTTCGCTCATCAAAT+GGG | - | tig0030275:4070-4089 | Msa1443000:CDS | 30.0% | |
TTTAGTTATCCTGTGAACAA+TGG | - | tig0030275:4457-4476 | Msa1443000:CDS | 30.0% | |
! | TTGATGAAAGCCATATTTTG+TGG | + | tig0030275:4484-4503 | None:intergenic | 30.0% |
ACAGTAGTATATCTGATACT+GGG | - | tig0030275:5116-5135 | Msa1443000:CDS | 30.0% | |
ATCCATGGAACATAGTTTAA+GGG | + | tig0030275:5412-5431 | None:intergenic | 30.0% | |
TATCCATGGAACATAGTTTA+AGG | + | tig0030275:5413-5432 | None:intergenic | 30.0% | |
TAAACTATGTTCCATGGATA+CGG | - | tig0030275:5413-5432 | Msa1443000:intron | 30.0% | |
!! | TATTAAAAGCTCTGAAGCAT+AGG | + | tig0030275:5554-5573 | None:intergenic | 30.0% |
!!! | TTTTAAAAGCTCTGAAGCAT+AGG | + | tig0030275:5651-5670 | None:intergenic | 30.0% |
!!! | GCTTTTAAAACAATACCGAA+AGG | - | tig0030275:5661-5680 | Msa1443000:CDS | 30.0% |
!! | TGTACTATCATTGATTTCCT+TGG | + | tig0030275:5871-5890 | None:intergenic | 30.0% |
TTCTAAATTTGGTCTATCCT+TGG | + | tig0030275:5937-5956 | None:intergenic | 30.0% | |
!! | GCCTTATTTGGTTCTAAATT+TGG | + | tig0030275:5948-5967 | None:intergenic | 30.0% |
!! | AATGTAGTTTTCGCCTTATT+TGG | + | tig0030275:5960-5979 | None:intergenic | 30.0% |
TTATCATCAACTTCAAGCTT+TGG | + | tig0030275:6245-6264 | None:intergenic | 30.0% | |
!!! | TCCTGAAGGTTTTGAAATTA+CGG | - | tig0030275:6355-6374 | Msa1443000:intron | 30.0% |
!! | GTTTCCAATGCTTTTAATTC+TGG | - | tig0030275:6515-6534 | Msa1443000:intron | 30.0% |
! | TTTCGATAGACTTTTTGAAC+AGG | - | tig0030275:6883-6902 | Msa1443000:intron | 30.0% |
ATTATTAAACAAATGCCAGG+AGG | - | tig0030275:7081-7100 | Msa1443000:intron | 30.0% | |
TCAAACTGTCAAATGAAGAA+AGG | - | tig0030275:7167-7186 | Msa1443000:intron | 30.0% | |
CAAACTGTCAAATGAAGAAA+GGG | - | tig0030275:7168-7187 | Msa1443000:intron | 30.0% | |
TTAGGAAACATCAGATTGAT+TGG | - | tig0030275:7223-7242 | Msa1443000:intron | 30.0% | |
GAGTGTATAAAGAAGTTACT+AGG | - | tig0030275:7289-7308 | Msa1443000:intron | 30.0% | |
!! | AGGATGTAATTGATTTGAGA+AGG | - | tig0030275:7485-7504 | Msa1443000:intron | 30.0% |
! | TTGATTTGAGAAGGAATAGA+TGG | - | tig0030275:7494-7513 | Msa1443000:intron | 30.0% |
TTGAGGATAATTAATTGGCA+AGG | + | tig0030275:7796-7815 | None:intergenic | 30.0% | |
! | GGTCTTTGAGGATAATTAAT+TGG | + | tig0030275:7801-7820 | None:intergenic | 30.0% |
GGTAATGAGTCTATAACATT+GGG | - | tig0030275:7825-7844 | Msa1443000:intron | 30.0% | |
GCAGCTCATAATATAAACTA+TGG | - | tig0030275:8077-8096 | Msa1443000:five_prime_UTR | 30.0% | |
ATGATGATCGGAATCTAAAT+AGG | - | tig0030275:8117-8136 | Msa1443000:five_prime_UTR | 30.0% | |
!! | TTCCAAGTGTTGAAGTGAAT+AGG | - | tig0030275:628-647 | Msa1443000:three_prime_UTR | 35.0% |
!!! | AGGTTTTTTAGGAGAGATTG+CGG | + | tig0030275:665-684 | None:intergenic | 35.0% |
GTGTGTGAAGATTAAGGTTA+AGG | + | tig0030275:708-727 | None:intergenic | 35.0% | |
GAAGAGAGAGAAAGTTGAAT+AGG | + | tig0030275:762-781 | None:intergenic | 35.0% | |
AGTGAAAGAGAAACCAGAAT+TGG | + | tig0030275:812-831 | None:intergenic | 35.0% | |
CACGAAAATGAATGAAAGTG+AGG | + | tig0030275:971-990 | None:intergenic | 35.0% | |
TGTGATTTGAGGGATTATTC+AGG | - | tig0030275:1142-1161 | Msa1443000:CDS | 35.0% | |
TTTGAGGGATTATTCAGGAT+TGG | - | tig0030275:1147-1166 | Msa1443000:CDS | 35.0% | |
!!! | TTCGGTTTTTGGTTGATTGA+AGG | + | tig0030275:1182-1201 | None:intergenic | 35.0% |
!! | ATAATAGGCGTCGTTCTTTT+CGG | + | tig0030275:1200-1219 | None:intergenic | 35.0% |
GACGCCTATTATCAAAAATC+TGG | - | tig0030275:1208-1227 | Msa1443000:CDS | 35.0% | |
!! | TCGCCCAGATTTTTGATAAT+AGG | + | tig0030275:1215-1234 | None:intergenic | 35.0% |
!! | TGTAATAGTGTTGGTCGATA+TGG | - | tig0030275:1442-1461 | Msa1443000:CDS | 35.0% |
!! | TCGATATGGATTGGGAAAAT+GGG | - | tig0030275:1456-1475 | Msa1443000:CDS | 35.0% |
! | TTATGTTTGGATTGGGAAAC+TGG | - | tig0030275:1642-1661 | Msa1443000:CDS | 35.0% |
! | TATGTTTGGATTGGGAAACT+GGG | - | tig0030275:1643-1662 | Msa1443000:CDS | 35.0% |
! | ATTTCATGATTGGTCCAAGA+TGG | + | tig0030275:1723-1742 | None:intergenic | 35.0% |
ATGAGCAATTTGTAACAACG+CGG | - | tig0030275:1894-1913 | Msa1443000:CDS | 35.0% | |
! | GAAAATTCAAGGCAGCATTT+TGG | - | tig0030275:1948-1967 | Msa1443000:CDS | 35.0% |
TGCAATTTCACAACCCAAAA+TGG | - | tig0030275:2010-2029 | Msa1443000:CDS | 35.0% | |
AACCCAAAATGGTTGTTTAC+CGG | - | tig0030275:2021-2040 | Msa1443000:CDS | 35.0% | |
! | TACCGGTAAACAACCATTTT+GGG | + | tig0030275:2026-2045 | None:intergenic | 35.0% |
! | TTACCGGTAAACAACCATTT+TGG | + | tig0030275:2027-2046 | None:intergenic | 35.0% |
TTCACTAACAAGTGTCCTAA+GGG | - | tig0030275:2269-2288 | Msa1443000:CDS | 35.0% | |
AAATGCTAACATGTTCCCTT+AGG | + | tig0030275:2287-2306 | None:intergenic | 35.0% | |
TAAAATAGGAACAGAGGAAG+GGG | + | tig0030275:2475-2494 | None:intergenic | 35.0% | |
AAGTCTAATAATGCACAAGG+TGG | - | tig0030275:2531-2550 | Msa1443000:CDS | 35.0% | |
AGTCTAATAATGCACAAGGT+GGG | - | tig0030275:2532-2551 | Msa1443000:CDS | 35.0% | |
AAGATCCCTTCTGCTTTATA+CGG | - | tig0030275:2765-2784 | Msa1443000:CDS | 35.0% | |
!! | AATGTTTGCGTTTTAGTGTC+TGG | - | tig0030275:2803-2822 | Msa1443000:CDS | 35.0% |
! | ATTAGTTTACGTGGTAGGAT+AGG | - | tig0030275:2857-2876 | Msa1443000:CDS | 35.0% |
! | GTACATTTTGAGCAACTCTA+GGG | + | tig0030275:2937-2956 | None:intergenic | 35.0% |
CAATCGATCCAAACTGAAAA+GGG | + | tig0030275:3192-3211 | None:intergenic | 35.0% | |
ACAATCGATCCAAACTGAAA+AGG | + | tig0030275:3193-3212 | None:intergenic | 35.0% | |
!! | ATTGTTCCTGGTGTTATGAA+TGG | - | tig0030275:3208-3227 | Msa1443000:intron | 35.0% |
!! | TTGTTCCTGGTGTTATGAAT+GGG | - | tig0030275:3209-3228 | Msa1443000:intron | 35.0% |
TTCTGCTCATCTAAATTAGG+AGG | + | tig0030275:3358-3377 | None:intergenic | 35.0% | |
!! | GAAAGTGCCAAAAAGAATAG+AGG | + | tig0030275:3398-3417 | None:intergenic | 35.0% |
! | ATACAAAAGTACGGACATCA+AGG | + | tig0030275:3422-3441 | None:intergenic | 35.0% |
TAATGCAAGAGATACTCATC+TGG | - | tig0030275:3739-3758 | Msa1443000:CDS | 35.0% | |
AATGCAAGAGATACTCATCT+GGG | - | tig0030275:3740-3759 | Msa1443000:CDS | 35.0% | |
ATCCACAAATTCAATCTCAG+GGG | - | tig0030275:3906-3925 | Msa1443000:CDS | 35.0% | |
ATTGGCATAGGAATATGCAT+GGG | + | tig0030275:3944-3963 | None:intergenic | 35.0% | |
TGAAGACCTGGAATAAAAAC+CGG | + | tig0030275:4004-4023 | None:intergenic | 35.0% | |
GATGAGCGAAACTTATGTTA+TGG | + | tig0030275:4066-4085 | None:intergenic | 35.0% | |
CATAAGTTTCGCTCATCAAA+TGG | - | tig0030275:4069-4088 | Msa1443000:CDS | 35.0% | |
! | TTGACAGTAGTAGTTTTTCG+AGG | + | tig0030275:4181-4200 | None:intergenic | 35.0% |
AAGAGCTAAGGCTTGATAAA+AGG | - | tig0030275:4224-4243 | Msa1443000:CDS | 35.0% | |
AGAGCTAAGGCTTGATAAAA+GGG | - | tig0030275:4225-4244 | Msa1443000:CDS | 35.0% | |
! | AGCAATGGATTTAACAGGAT+GGG | + | tig0030275:4314-4333 | None:intergenic | 35.0% |
CCTTCGAATTATTATCCTTC+CGG | - | tig0030275:4343-4362 | Msa1443000:CDS | 35.0% | |
! | GTTATCTGGCTACTTGTTAA+CGG | + | tig0030275:4415-4434 | None:intergenic | 35.0% |
ACAGGATAACTAAATATCGG+TGG | + | tig0030275:4451-4470 | None:intergenic | 35.0% | |
GAACAATGGTCCACAAAATA+TGG | - | tig0030275:4471-4490 | Msa1443000:CDS | 35.0% | |
AGAAACACCACTTGGTTTAA+TGG | + | tig0030275:4641-4660 | None:intergenic | 35.0% | |
ACAGCATTCTAAATCTTCTG+AGG | - | tig0030275:4738-4757 | Msa1443000:CDS | 35.0% | |
TAATAATGAAGCCAACACGA+GGG | - | tig0030275:4876-4895 | Msa1443000:CDS | 35.0% | |
AAGGATAACCAGAAGAAATC+TGG | - | tig0030275:4925-4944 | Msa1443000:CDS | 35.0% | |
AGGATAACCAGAAGAAATCT+GGG | - | tig0030275:4926-4945 | Msa1443000:CDS | 35.0% | |
! | CTATTTTCCCAGATTTCTTC+TGG | + | tig0030275:4936-4955 | None:intergenic | 35.0% |
CAGAAGAAATCTGGGAAAAT+AGG | - | tig0030275:4934-4953 | Msa1443000:CDS | 35.0% | |
AACCTGTAGGAAAAGTCAAA+AGG | + | tig0030275:5050-5069 | None:intergenic | 35.0% | |
GACAGTAGTATATCTGATAC+TGG | - | tig0030275:5115-5134 | Msa1443000:CDS | 35.0% | |
CAGTAGTATATCTGATACTG+GGG | - | tig0030275:5117-5136 | Msa1443000:CDS | 35.0% | |
AGATCTTCAGTGATAATTGC+AGG | + | tig0030275:5178-5197 | None:intergenic | 35.0% | |
AACCCTTAAACTATGTTCCA+TGG | - | tig0030275:5407-5426 | Msa1443000:intron | 35.0% | |
AAACTATGTTCCATGGATAC+GGG | - | tig0030275:5414-5433 | Msa1443000:intron | 35.0% | |
! | ATGTCTTTCTTCAGAGCTTT+TGG | - | tig0030275:5521-5540 | Msa1443000:intron | 35.0% |
TAAAACAATACCGAAAGGAC+AGG | - | tig0030275:5666-5685 | Msa1443000:CDS | 35.0% | |
!!! | GAATCTGCTAGTTTTAAGTC+AGG | - | tig0030275:5691-5710 | Msa1443000:intron | 35.0% |
ACTAGAATCCAATGCAGTAT+AGG | + | tig0030275:5749-5768 | None:intergenic | 35.0% | |
GATTCTAGTGATGTCTCTTT+AGG | - | tig0030275:5760-5779 | Msa1443000:intron | 35.0% | |
TGATTTACCAGAAACAACCA+AGG | - | tig0030275:5851-5870 | Msa1443000:CDS | 35.0% | |
! | TTGATTTCCTTGGTTGTTTC+TGG | + | tig0030275:5861-5880 | None:intergenic | 35.0% |
ATAAAGATCAGAAGTTGTCC+CGG | + | tig0030275:6030-6049 | None:intergenic | 35.0% | |
TAATGCATATAAAGGACCTG+AGG | - | tig0030275:6049-6068 | Msa1443000:intron | 35.0% | |
GAAAGTGAATCTACATCTGA+AGG | - | tig0030275:6107-6126 | Msa1443000:intron | 35.0% | |
!! | AGTTGATGATAAATCTCAGC+AGG | - | tig0030275:6253-6272 | Msa1443000:CDS | 35.0% |
! | AAATCTCAGCAGGTTTTTGA+TGG | - | tig0030275:6263-6282 | Msa1443000:CDS | 35.0% |
! | TTTTGATGGAAGTGGAAGTA+CGG | - | tig0030275:6277-6296 | Msa1443000:CDS | 35.0% |
GCTTTGATGAATTCCAATGT+TGG | - | tig0030275:6392-6411 | Msa1443000:intron | 35.0% | |
ATCACGAGAATTACCAACAT+TGG | + | tig0030275:6408-6427 | None:intergenic | 35.0% | |
!!! | GAGGCAATTTTGGTGTTTTA+AGG | - | tig0030275:6579-6598 | Msa1443000:intron | 35.0% |
! | GCTGAGAAGAAGTATGAAAT+AGG | - | tig0030275:6788-6807 | Msa1443000:intron | 35.0% |
!! | TTTGAGGAGTTAGTTTGTTC+AGG | + | tig0030275:6862-6881 | None:intergenic | 35.0% |
AGAACAAGAAGAGGCAAATA+AGG | - | tig0030275:7123-7142 | Msa1443000:intron | 35.0% | |
AGAAGAAAATGTTGACAGAG+AGG | - | tig0030275:7257-7276 | Msa1443000:intron | 35.0% | |
! | TCCATATGTTCCTTAGCTTT+GGG | + | tig0030275:7394-7413 | None:intergenic | 35.0% |
ATCCATATGTTCCTTAGCTT+TGG | + | tig0030275:7395-7414 | None:intergenic | 35.0% | |
TAGGGTGAGATTTATGTTGA+AGG | - | tig0030275:7465-7484 | Msa1443000:intron | 35.0% | |
CAAGTAAGGAGAAAAGTTGA+TGG | - | tig0030275:7517-7536 | Msa1443000:intron | 35.0% | |
! | TTGATGGTCCAAAAAGATTG+AGG | - | tig0030275:7533-7552 | Msa1443000:intron | 35.0% |
GAAACAATCAATCTGCAAGA+AGG | - | tig0030275:7625-7644 | Msa1443000:CDS | 35.0% | |
TAATTAATTGGCAAGGTCCT+AGG | + | tig0030275:7789-7808 | None:intergenic | 35.0% | |
TAATTATCCTCAAAGACCCT+TGG | - | tig0030275:7803-7822 | Msa1443000:intron | 35.0% | |
AATTATCCTCAAAGACCCTT+GGG | - | tig0030275:7804-7823 | Msa1443000:intron | 35.0% | |
GTTATAGACTCATTACCCAA+GGG | + | tig0030275:7822-7841 | None:intergenic | 35.0% | |
TGTTATAGACTCATTACCCA+AGG | + | tig0030275:7823-7842 | None:intergenic | 35.0% | |
GGGTAATGAGTCTATAACAT+TGG | - | tig0030275:7824-7843 | Msa1443000:intron | 35.0% | |
ACTATGGTAACAGAGACTTA+AGG | - | tig0030275:8093-8112 | Msa1443000:five_prime_UTR | 35.0% | |
GAGACTTAAGGAATGATGAT+CGG | - | tig0030275:8105-8124 | Msa1443000:five_prime_UTR | 35.0% | |
!! | GATGCATTTTGAGAGACAAT+TGG | + | tig0030275:8179-8198 | None:intergenic | 35.0% |
CACCTATTCACTTCAACACT+TGG | + | tig0030275:633-652 | None:intergenic | 40.0% | |
!!! | GTCAAGGTGGTAGGTTTTTT+AGG | + | tig0030275:676-695 | None:intergenic | 40.0% |
! | GTTAAGGTTAAGGTTGGTCA+AGG | + | tig0030275:692-711 | None:intergenic | 40.0% |
AGAATTGGAAGAGATTGTGG+AGG | + | tig0030275:797-816 | None:intergenic | 40.0% | |
TCCACAATCTCTTCCAATTC+TGG | - | tig0030275:796-815 | Msa1443000:three_prime_UTR | 40.0% | |
ACCAGAATTGGAAGAGATTG+TGG | + | tig0030275:800-819 | None:intergenic | 40.0% | |
!!! | TGCAGGGAAGTTTTGAAAAG+AGG | - | tig0030275:1072-1091 | Msa1443000:CDS | 40.0% |
!! | TCTAGCTTTAATCAGCAGAG+AGG | - | tig0030275:1238-1257 | Msa1443000:CDS | 40.0% |
CTCTAATAGGAGGTCAGTTA+GGG | - | tig0030275:1318-1337 | Msa1443000:CDS | 40.0% | |
!! | TAGTGTTGGTCGATATGGAT+TGG | - | tig0030275:1447-1466 | Msa1443000:CDS | 40.0% |
!! | AGTGTTGGTCGATATGGATT+GGG | - | tig0030275:1448-1467 | Msa1443000:CDS | 40.0% |
!! | GTCGATATGGATTGGGAAAA+TGG | - | tig0030275:1455-1474 | Msa1443000:CDS | 40.0% |
!! | CGATATGGATTGGGAAAATG+GGG | - | tig0030275:1457-1476 | Msa1443000:CDS | 40.0% |
!! | GATATGGATTGGGAAAATGG+GGG | - | tig0030275:1458-1477 | Msa1443000:CDS | 40.0% |
!! | ATATGGATTGGGAAAATGGG+GGG | - | tig0030275:1459-1478 | Msa1443000:CDS | 40.0% |
AAAAGAGTAAACCGCCATCT+TGG | - | tig0030275:1706-1725 | Msa1443000:CDS | 40.0% | |
! | TGTCACGTTAAGTGTCATTG+TGG | - | tig0030275:1854-1873 | Msa1443000:CDS | 40.0% |
AAATTGCTCATGTATCCACG+TGG | + | tig0030275:1885-1904 | None:intergenic | 40.0% | |
GACTGACGTTCGAAAATTCA+AGG | - | tig0030275:1937-1956 | Msa1443000:CDS | 40.0% | |
GCAAGTGACTGTCACAAATT+GGG | + | tig0030275:1993-2012 | None:intergenic | 40.0% | |
TGCAAGTGACTGTCACAAAT+TGG | + | tig0030275:1994-2013 | None:intergenic | 40.0% | |
TGACAAAGGGTCTTGCTAAT+AGG | - | tig0030275:2138-2157 | Msa1443000:CDS | 40.0% | |
GACAAAGGGTCTTGCTAATA+GGG | - | tig0030275:2139-2158 | Msa1443000:CDS | 40.0% | |
TGCTAATAGGGCACATGTTA+AGG | - | tig0030275:2151-2170 | Msa1443000:CDS | 40.0% | |
CTTCACTAACAAGTGTCCTA+AGG | - | tig0030275:2268-2287 | Msa1443000:CDS | 40.0% | |
TTCTCCCATTATGAGTAGTG+TGG | - | tig0030275:2432-2451 | Msa1443000:CDS | 40.0% | |
GAGACCACACTACTCATAAT+GGG | + | tig0030275:2439-2458 | None:intergenic | 40.0% | |
AGAGACCACACTACTCATAA+TGG | + | tig0030275:2440-2459 | None:intergenic | 40.0% | |
CAGTTGAATTCACTGGTGAA+GGG | + | tig0030275:2572-2591 | None:intergenic | 40.0% | |
TCAGTTGAATTCACTGGTGA+AGG | + | tig0030275:2573-2592 | None:intergenic | 40.0% | |
! | TTTGGCTCAGTTGAATTCAC+TGG | + | tig0030275:2579-2598 | None:intergenic | 40.0% |
! | TACATGAGTACCGTTATGCA+TGG | + | tig0030275:2622-2641 | None:intergenic | 40.0% |
TAAAGCTTACCATGCATCTG+CGG | + | tig0030275:2648-2667 | None:intergenic | 40.0% | |
!!! | CTTCATTGGTTTTTGGTGTC+TGG | - | tig0030275:2708-2727 | Msa1443000:CDS | 40.0% |
AGATCCCTTCTGCTTTATAC+GGG | - | tig0030275:2766-2785 | Msa1443000:CDS | 40.0% | |
TCTTCCCGTATAAAGCAGAA+GGG | + | tig0030275:2773-2792 | None:intergenic | 40.0% | |
TTCTTCCCGTATAAAGCAGA+AGG | + | tig0030275:2774-2793 | None:intergenic | 40.0% | |
! | GGTACATTTTGAGCAACTCT+AGG | + | tig0030275:2938-2957 | None:intergenic | 40.0% |
TGACTAACATACCCTTAGCA+GGG | + | tig0030275:3009-3028 | None:intergenic | 40.0% | |
TTGACTAACATACCCTTAGC+AGG | + | tig0030275:3010-3029 | None:intergenic | 40.0% | |
TGTCTCAGGAGATACATCAA+AGG | - | tig0030275:3162-3181 | Msa1443000:intron | 40.0% | |
!! | AAGGCATTCCCTTTTCAGTT+TGG | - | tig0030275:3181-3200 | Msa1443000:intron | 40.0% |
!! | TGTTCCTGGTGTTATGAATG+GGG | - | tig0030275:3210-3229 | Msa1443000:intron | 40.0% |
CGCTTCTGCTCATCTAAATT+AGG | + | tig0030275:3361-3380 | None:intergenic | 40.0% | |
!! | ATCATTCCTTCGGAAGCATT+GGG | + | tig0030275:3469-3488 | None:intergenic | 40.0% |
! | TATCATTCCTTCGGAAGCAT+TGG | + | tig0030275:3470-3489 | None:intergenic | 40.0% |
GTTACAACTGCATCATTCCT+AGG | + | tig0030275:3710-3729 | None:intergenic | 40.0% | |
ATGCAAGAGATACTCATCTG+GGG | - | tig0030275:3741-3760 | Msa1443000:CDS | 40.0% | |
TCACAGCCATCTTTACAGTT+TGG | - | tig0030275:3875-3894 | Msa1443000:intron | 40.0% | |
ATCCCCTGAGATTGAATTTG+TGG | + | tig0030275:3911-3930 | None:intergenic | 40.0% | |
CATTGGCATAGGAATATGCA+TGG | + | tig0030275:3945-3964 | None:intergenic | 40.0% | |
!! | ATTGGTATAGGCATTGGCAT+AGG | + | tig0030275:3956-3975 | None:intergenic | 40.0% |
ATGCCAATGCCTATACCAAT+CGG | - | tig0030275:3956-3975 | Msa1443000:CDS | 40.0% | |
TTTCCGATTGGTATAGGCAT+TGG | + | tig0030275:3962-3981 | None:intergenic | 40.0% | |
CCAACATTTCCGATTGGTAT+AGG | + | tig0030275:3968-3987 | None:intergenic | 40.0% | |
CCTATACCAATCGGAAATGT+TGG | - | tig0030275:3965-3984 | Msa1443000:CDS | 40.0% | |
ACTTGTCCAACATTTCCGAT+TGG | + | tig0030275:3974-3993 | None:intergenic | 40.0% | |
GCGAAACTTATGTTATGGCT+TGG | + | tig0030275:4061-4080 | None:intergenic | 40.0% | |
! | TTAGCTCTTCATGCGTTTCA+GGG | + | tig0030275:4213-4232 | None:intergenic | 40.0% |
CAGATGGATATTCAGATGGT+GGG | - | tig0030275:4248-4267 | Msa1443000:CDS | 40.0% | |
! | TGGGATTGAGAAGGTACATT+AGG | + | tig0030275:4295-4314 | None:intergenic | 40.0% |
TTAACAGGATGGGATTGAGA+AGG | + | tig0030275:4304-4323 | None:intergenic | 40.0% | |
! | CAGCAATGGATTTAACAGGA+TGG | + | tig0030275:4315-4334 | None:intergenic | 40.0% |
! | GAAGCAGCAATGGATTTAAC+AGG | + | tig0030275:4319-4338 | None:intergenic | 40.0% |
CCGGAAGGATAATAATTCGA+AGG | + | tig0030275:4346-4365 | None:intergenic | 40.0% | |
GAACTAGGAGGTGGATAATA+GGG | + | tig0030275:4388-4407 | None:intergenic | 40.0% | |
AGAACTAGGAGGTGGATAAT+AGG | + | tig0030275:4389-4408 | None:intergenic | 40.0% | |
CTTGTTAACGGAAGAGAACT+AGG | + | tig0030275:4403-4422 | None:intergenic | 40.0% | |
! | TTTTGTGGACCATTGTTCAC+AGG | + | tig0030275:4469-4488 | None:intergenic | 40.0% |
!! | AGGAGTGCTGACTTTAGTAA+CGG | + | tig0030275:4530-4549 | None:intergenic | 40.0% |
!! | GAAGCTGATGATGTCACTTT+AGG | + | tig0030275:4601-4620 | None:intergenic | 40.0% |
AGTGACATCATCAGCTTCAA+CGG | - | tig0030275:4603-4622 | Msa1443000:CDS | 40.0% | |
TCTGTGACCATTAAACCAAG+TGG | - | tig0030275:4631-4650 | Msa1443000:CDS | 40.0% | |
! | ACAGATGCAGCAGATTGTTT+TGG | + | tig0030275:4787-4806 | None:intergenic | 40.0% |
CTAATAATGAAGCCAACACG+AGG | - | tig0030275:4875-4894 | Msa1443000:CDS | 40.0% | |
TAGTAGGTCCAACTCTTCAA+AGG | - | tig0030275:4906-4925 | Msa1443000:CDS | 40.0% | |
! | CTGGTTATCCTTTGAAGAGT+TGG | + | tig0030275:4917-4936 | None:intergenic | 40.0% |
AGGTCAATCATCTGAAGATC+AGG | - | tig0030275:4954-4973 | Msa1443000:CDS | 40.0% | |
!!! | TGCCTTTTGACTTTTCCTAC+AGG | - | tig0030275:5045-5064 | Msa1443000:CDS | 40.0% |
!! | TGGTTTGTTTCACTTCCTAC+AGG | + | tig0030275:5151-5170 | None:intergenic | 40.0% |
CAGTGATAATTGCAGGAGAA+TGG | + | tig0030275:5171-5190 | None:intergenic | 40.0% | |
GAAGATCTTCTCACATCTGA+AGG | - | tig0030275:5190-5209 | Msa1443000:CDS | 40.0% | |
TGAAGGATCTATTGCTGAAG+TGG | - | tig0030275:5207-5226 | Msa1443000:intron | 40.0% | |
AAGATAGACGAATCATCCGA+AGG | - | tig0030275:5259-5278 | Msa1443000:intron | 40.0% | |
!! | TAAAAGCTCTGAAGCATAGG+AGG | + | tig0030275:5551-5570 | None:intergenic | 40.0% |
!! | TAAAAGCTCTGAAGCATAGG+AGG | + | tig0030275:5551-5570 | None:intergenic | 40.0% |
!!! | CTAGTTTTAAGTCAGGTGAC+AGG | - | tig0030275:5698-5717 | Msa1443000:intron | 40.0% |
CATACCAACCTATACTGCAT+TGG | - | tig0030275:5738-5757 | Msa1443000:intron | 40.0% | |
GAATCCAATGCAGTATAGGT+TGG | + | tig0030275:5745-5764 | None:intergenic | 40.0% | |
! | CCAGTTTCTTTCTTTTCCTC+AGG | + | tig0030275:6068-6087 | None:intergenic | 40.0% |
CCTGAGGAAAAGAAAGAAAC+TGG | - | tig0030275:6065-6084 | Msa1443000:intron | 40.0% | |
ATCTAACTGAGCAGAATCTG+TGG | + | tig0030275:6147-6166 | None:intergenic | 40.0% | |
ACAGATTCTGCTCAGTTAGA+TGG | - | tig0030275:6146-6165 | Msa1443000:intron | 40.0% | |
CAATGCATTACTCTTCCTGA+AGG | - | tig0030275:6341-6360 | Msa1443000:intron | 40.0% | |
GCCGTAATTTCAAAACCTTC+AGG | + | tig0030275:6359-6378 | None:intergenic | 40.0% | |
! | ACGCCCAGAATTAAAAGCAT+TGG | + | tig0030275:6522-6541 | None:intergenic | 40.0% |
!! | AATGCTTTTAATTCTGGGCG+TGG | - | tig0030275:6521-6540 | Msa1443000:intron | 40.0% |
!! | TTTTAATTCTGGGCGTGGTT+TGG | - | tig0030275:6526-6545 | Msa1443000:intron | 40.0% |
AAACACCAAAATTGCCTCCT+TGG | + | tig0030275:6577-6596 | None:intergenic | 40.0% | |
ATGCAAAGAAATAGCCCTGA+CGG | - | tig0030275:6683-6702 | Msa1443000:intron | 40.0% | |
! | TAAAGTGTCAGATGCAGAAG+AGG | - | tig0030275:6811-6830 | Msa1443000:intron | 40.0% |
CATCTCACAAATCTTCGAGA+AGG | - | tig0030275:6949-6968 | Msa1443000:intron | 40.0% | |
GCATACATTTCACAGAAGGT+AGG | + | tig0030275:6986-7005 | None:intergenic | 40.0% | |
GTTGGCATACATTTCACAGA+AGG | + | tig0030275:6990-7009 | None:intergenic | 40.0% | |
! | TGAGTTACCTGATTTGAGTG+TGG | - | tig0030275:7030-7049 | Msa1443000:intron | 40.0% |
!! | AGAGGCAAATAAGGTTGATG+AGG | - | tig0030275:7132-7151 | Msa1443000:intron | 40.0% |
TGCAAGCTGATGAGTACTAT+TGG | - | tig0030275:7352-7371 | Msa1443000:intron | 40.0% | |
GCAAGCTGATGAGTACTATT+GGG | - | tig0030275:7353-7372 | Msa1443000:intron | 40.0% | |
CAAGCTGATGAGTACTATTG+GGG | - | tig0030275:7354-7373 | Msa1443000:intron | 40.0% | |
!! | TATGTTCCTTAGCTTTGGGA+TGG | + | tig0030275:7390-7409 | None:intergenic | 40.0% |
TCCCAAAGCTAAGGAACATA+TGG | - | tig0030275:7390-7409 | Msa1443000:intron | 40.0% | |
GAAGGAATAGATGGCAAGTA+AGG | - | tig0030275:7503-7522 | Msa1443000:intron | 40.0% | |
ATGGTCCAAAAAGATTGAGG+AGG | - | tig0030275:7536-7555 | Msa1443000:CDS | 40.0% | |
! | GTGTACCTCCTCAATCTTTT+TGG | + | tig0030275:7544-7563 | None:intergenic | 40.0% |
TTGTCTCCTACTTCTCCAAT+GGG | - | tig0030275:7684-7703 | Msa1443000:exon | 40.0% | |
TCTACTCAAACACGTGGATA+TGG | - | tig0030275:7723-7742 | Msa1443000:five_prime_UTR | 40.0% | |
AACACGTGGATATGGTTTAC+AGG | - | tig0030275:7731-7750 | Msa1443000:five_prime_UTR | 40.0% | |
!!! | AGGATGCTCGTTTTGAAGAA+AGG | - | tig0030275:7751-7770 | Msa1443000:five_prime_UTR | 40.0% |
AAAGGCAATCTTATGAGCCT+AGG | - | tig0030275:7769-7788 | Msa1443000:intron | 40.0% | |
TCAATACCTGATGTGCATTC+TGG | - | tig0030275:7906-7925 | Msa1443000:intron | 40.0% | |
AGAATGCCTAGCGGTATTAA+TGG | - | tig0030275:7945-7964 | Msa1443000:five_prime_UTR | 40.0% | |
CCATAACCATTAATACCGCT+AGG | + | tig0030275:7954-7973 | None:intergenic | 40.0% | |
CCTAGCGGTATTAATGGTTA+TGG | - | tig0030275:7951-7970 | Msa1443000:five_prime_UTR | 40.0% | |
CTTGAATGATCATATCCAGC+TGG | + | tig0030275:8053-8072 | None:intergenic | 40.0% | |
CATCTACAGATGAACGACTA+CGG | - | tig0030275:8195-8214 | Msa1443000:five_prime_UTR | 40.0% | |
ATCTACAGATGAACGACTAC+GGG | - | tig0030275:8196-8215 | Msa1443000:five_prime_UTR | 40.0% | |
! | TTAAGGTTGGTCAAGGTGGT+AGG | + | tig0030275:685-704 | None:intergenic | 45.0% |
! | AAGGTTAAGGTTGGTCAAGG+TGG | + | tig0030275:689-708 | None:intergenic | 45.0% |
GAAAGTGAGACAGACAAGAG+AGG | + | tig0030275:736-755 | None:intergenic | 45.0% | |
GGGGAAGAAGAAGAAGAAGA+GGG | + | tig0030275:839-858 | None:intergenic | 45.0% | |
AGGGGAAGAAGAAGAAGAAG+AGG | + | tig0030275:840-859 | None:intergenic | 45.0% | |
! | AGTACTGAGAGAGAGAGAGA+GGG | + | tig0030275:878-897 | None:intergenic | 45.0% |
!!! | ATCTGCGTTTTTGGGTTTGC+AGG | - | tig0030275:1055-1074 | Msa1443000:CDS | 45.0% |
!!! | TCTGCGTTTTTGGGTTTGCA+GGG | - | tig0030275:1056-1075 | Msa1443000:CDS | 45.0% |
! | GCGTCGTTCTTTTCGGTTTT+TGG | + | tig0030275:1193-1212 | None:intergenic | 45.0% |
CTTCGTCACTCTCCTCTAAT+AGG | - | tig0030275:1305-1324 | Msa1443000:CDS | 45.0% | |
CCTAACTGACCTCCTATTAG+AGG | + | tig0030275:1320-1339 | None:intergenic | 45.0% | |
CCTCTAATAGGAGGTCAGTT+AGG | - | tig0030275:1317-1336 | Msa1443000:CDS | 45.0% | |
!! | TATGGATTGGGAAAATGGGG+GGG | - | tig0030275:1460-1479 | Msa1443000:CDS | 45.0% |
! | TCATGATTGGTCCAAGATGG+CGG | + | tig0030275:1720-1739 | None:intergenic | 45.0% |
TTTGTAACAACGCGGCTTGA+CGG | - | tig0030275:1902-1921 | Msa1443000:CDS | 45.0% | |
TGGAGTGTGAACTTCACTCA+TGG | + | tig0030275:2084-2103 | None:intergenic | 45.0% | |
ATGCACAAGGTGGGCAATAT+AGG | - | tig0030275:2541-2560 | Msa1443000:CDS | 45.0% | |
TGCACAAGGTGGGCAATATA+GGG | - | tig0030275:2542-2561 | Msa1443000:CDS | 45.0% | |
CAAACAGTACTTACGCTGCT+CGG | - | tig0030275:2595-2614 | Msa1443000:CDS | 45.0% | |
AAAGCAGAAGGGATCTTCTC+AGG | + | tig0030275:2762-2781 | None:intergenic | 45.0% | |
!! | GTAGGATAGGAGCATCTGAT+GGG | - | tig0030275:2870-2889 | Msa1443000:CDS | 45.0% |
GATTCAGATGCCTTTGCAAC+CGG | + | tig0030275:2896-2915 | None:intergenic | 45.0% | |
CAGTTTGGATCGATTGTTCC+TGG | - | tig0030275:3196-3215 | Msa1443000:intron | 45.0% | |
ACAACTGCATCATTCCTAGG+TGG | + | tig0030275:3707-3726 | None:intergenic | 45.0% | |
TGCAAGAGATACTCATCTGG+GGG | - | tig0030275:3742-3761 | Msa1443000:CDS | 45.0% | |
CTTCTGTTGTTCCTGTACCT+GGG | - | tig0030275:3825-3844 | Msa1443000:intron | 45.0% | |
TGTGACTGCTGAAATGGTGT+TGG | + | tig0030275:3860-3879 | None:intergenic | 45.0% | |
CAGCCATCTTTACAGTTTGG+CGG | - | tig0030275:3878-3897 | Msa1443000:intron | 45.0% | |
!! | CAACAGCCGGTTTTTATTCC+AGG | - | tig0030275:3995-4014 | Msa1443000:CDS | 45.0% |
CTCATCCAATGCACTCTCAT+GGG | - | tig0030275:4026-4045 | Msa1443000:CDS | 45.0% | |
! | ATCATCCCATGAGAGTGCAT+TGG | + | tig0030275:4034-4053 | None:intergenic | 45.0% |
TCATCAGTTGCCCCATCAAA+TGG | - | tig0030275:4093-4112 | Msa1443000:CDS | 45.0% | |
CATCAGTTGCCCCATCAAAT+GGG | - | tig0030275:4094-4113 | Msa1443000:CDS | 45.0% | |
AAAATTTCCACCCTGCTGCT+GGG | + | tig0030275:4152-4171 | None:intergenic | 45.0% | |
! | CTTAGCTCTTCATGCGTTTC+AGG | + | tig0030275:4214-4233 | None:intergenic | 45.0% |
CTGAAACGCATGAAGAGCTA+AGG | - | tig0030275:4212-4231 | Msa1443000:CDS | 45.0% | |
AGGCTTGATAAAAGGGCAGA+TGG | - | tig0030275:4232-4251 | Msa1443000:CDS | 45.0% | |
AGGGCAGATGGATATTCAGA+TGG | - | tig0030275:4244-4263 | Msa1443000:CDS | 45.0% | |
GCAGATGGATATTCAGATGG+TGG | - | tig0030275:4247-4266 | Msa1443000:CDS | 45.0% | |
!! | TATTCAGATGGTGGGTCATC+TGG | - | tig0030275:4256-4275 | Msa1443000:CDS | 45.0% |
AGGACTGGAACTATATGAGC+CGG | + | tig0030275:4365-4384 | None:intergenic | 45.0% | |
GTTAACGGAAGAGAACTAGG+AGG | + | tig0030275:4400-4419 | None:intergenic | 45.0% | |
AATATCGGTGGCTGAGTGTT+GGG | + | tig0030275:4439-4458 | None:intergenic | 45.0% | |
AAATATCGGTGGCTGAGTGT+TGG | + | tig0030275:4440-4459 | None:intergenic | 45.0% | |
!! | GGAGTGCTGACTTTAGTAAC+GGG | + | tig0030275:4529-4548 | None:intergenic | 45.0% |
GCTTCAGCAATGTGAGGAAT+AGG | + | tig0030275:4550-4569 | None:intergenic | 45.0% | |
GTGACATCATCAGCTTCAAC+GGG | - | tig0030275:4604-4623 | Msa1443000:CDS | 45.0% | |
TGACATCATCAGCTTCAACG+GGG | - | tig0030275:4605-4624 | Msa1443000:CDS | 45.0% | |
GTAACAGCAGAAACACCACT+TGG | + | tig0030275:4649-4668 | None:intergenic | 45.0% | |
TCAAAATCCCGAAACCTCCT+CGG | - | tig0030275:4705-4724 | Msa1443000:CDS | 45.0% | |
AGAGATTTCCGAGGAGGTTT+CGG | + | tig0030275:4716-4735 | None:intergenic | 45.0% | |
ATGCTGTGTAGAGATTTCCG+AGG | + | tig0030275:4725-4744 | None:intergenic | 45.0% | |
GAAGAGTTGGACCTACTAAC+AGG | + | tig0030275:4904-4923 | None:intergenic | 45.0% | |
GAGATTGCACAGAAACCTGT+AGG | + | tig0030275:5063-5082 | None:intergenic | 45.0% | |
TTCTGTGCAATCTCCTACAG+TGG | - | tig0030275:5069-5088 | Msa1443000:CDS | 45.0% | |
TGTTTCACTTCCTACAGGTG+TGG | + | tig0030275:5146-5165 | None:intergenic | 45.0% | |
ATGTTCCATGGATACGGGTA+TGG | - | tig0030275:5419-5438 | Msa1443000:intron | 45.0% | |
TAGTACCATACCCGTATCCA+TGG | + | tig0030275:5427-5446 | None:intergenic | 45.0% | |
ATGGATACGGGTATGGTACT+AGG | - | tig0030275:5426-5445 | Msa1443000:intron | 45.0% | |
GCAGATTCATCCTGTCCTTT+CGG | + | tig0030275:5679-5698 | None:intergenic | 45.0% | |
GACAGGACAGATGATAGCTT+AGG | - | tig0030275:5715-5734 | Msa1443000:intron | 45.0% | |
CTTGGTACCTGACACTGAAT+GGG | + | tig0030275:5919-5938 | None:intergenic | 45.0% | |
ATAAAGCCGAACCTGATGAC+TGG | - | tig0030275:6195-6214 | Msa1443000:intron | 45.0% | |
TAAAGCCGAACCTGATGACT+GGG | - | tig0030275:6196-6215 | Msa1443000:intron | 45.0% | |
! | CAGCAGGTTTTTGATGGAAG+TGG | - | tig0030275:6269-6288 | Msa1443000:CDS | 45.0% |
AATTACGGCAGACATAGCTC+AGG | - | tig0030275:6370-6389 | Msa1443000:intron | 45.0% | |
TCTACAGTTCTTCCAGGACT+AGG | + | tig0030275:6437-6456 | None:intergenic | 45.0% | |
GAAGAACTGTAGACAGGTCA+AGG | - | tig0030275:6444-6463 | Msa1443000:intron | 45.0% | |
AACTGTAGACAGGTCAAGGA+TGG | - | tig0030275:6448-6467 | Msa1443000:intron | 45.0% | |
TTGTGGCTGAGGAAGACAAA+TGG | - | tig0030275:6486-6505 | Msa1443000:intron | 45.0% | |
!!! | GGTGTTTTAAGGAATCCTCG+TGG | - | tig0030275:6590-6609 | Msa1443000:intron | 45.0% |
TTTAAGGAATCCTCGTGGAC+CGG | - | tig0030275:6595-6614 | Msa1443000:intron | 45.0% | |
TTTCTGGGCCAATGCAATCT+GGG | - | tig0030275:6645-6664 | Msa1443000:intron | 45.0% | |
TGCAAAGAAATAGCCCTGAC+GGG | - | tig0030275:6684-6703 | Msa1443000:intron | 45.0% | |
AAGGAATTAAACCCCTCTGC+TGG | + | tig0030275:6736-6755 | None:intergenic | 45.0% | |
ATCATCTGTAAGGGAGACTG+GGG | + | tig0030275:6761-6780 | None:intergenic | 45.0% | |
CATCATCTGTAAGGGAGACT+GGG | + | tig0030275:6762-6781 | None:intergenic | 45.0% | |
TCCCTTACAGATGATGCACA+AGG | - | tig0030275:6766-6785 | Msa1443000:intron | 45.0% | |
GCCTTGTGCATCATCTGTAA+GGG | + | tig0030275:6770-6789 | None:intergenic | 45.0% | |
! | AGCCTTGTGCATCATCTGTA+AGG | + | tig0030275:6771-6790 | None:intergenic | 45.0% |
! | AATCTTCGAGAAGGCTCTGA+TGG | - | tig0030275:6958-6977 | Msa1443000:intron | 45.0% |
TCGTTGTCCACACTCAAATC+AGG | + | tig0030275:7040-7059 | None:intergenic | 45.0% | |
AATGCCAGGAGGAATTTGAG+AGG | - | tig0030275:7092-7111 | Msa1443000:intron | 45.0% | |
ATGCCAGGAGGAATTTGAGA+GGG | - | tig0030275:7093-7112 | Msa1443000:intron | 45.0% | |
GGGTGAAAGAGAACAAGAAG+AGG | - | tig0030275:7114-7133 | Msa1443000:intron | 45.0% | |
!! | AAATAAGGTTGATGAGGCCG+AGG | - | tig0030275:7138-7157 | Msa1443000:intron | 45.0% |
!! | AATAAGGTTGATGAGGCCGA+GGG | - | tig0030275:7139-7158 | Msa1443000:intron | 45.0% |
AGAGAAGAACCAAGGCAAGA+AGG | - | tig0030275:7194-7213 | Msa1443000:intron | 45.0% | |
GAAGTTACTAGGTCAGTGTC+AGG | - | tig0030275:7300-7319 | Msa1443000:intron | 45.0% | |
TCCTGATGAGGAAGATGTTG+AGG | - | tig0030275:7324-7343 | Msa1443000:intron | 45.0% | |
GATTGACCATCCCAAAGCTA+AGG | - | tig0030275:7381-7400 | Msa1443000:intron | 45.0% | |
!! | TCAAGCACAAGTTGGTAGGA+TGG | - | tig0030275:7590-7609 | Msa1443000:CDS | 45.0% |
!! | CAAGCACAAGTTGGTAGGAT+GGG | - | tig0030275:7591-7610 | Msa1443000:CDS | 45.0% |
! | AGAAGGAACCCCATGGATTT+TGG | - | tig0030275:7642-7661 | Msa1443000:CDS | 45.0% |
!! | CTCTAGGACCAAAATCCATG+GGG | + | tig0030275:7653-7672 | None:intergenic | 45.0% |
!! | CCTCTAGGACCAAAATCCAT+GGG | + | tig0030275:7654-7673 | None:intergenic | 45.0% |
!! | TCCTCTAGGACCAAAATCCA+TGG | + | tig0030275:7655-7674 | None:intergenic | 45.0% |
GACAACATAGGTGATCCTCT+AGG | + | tig0030275:7669-7688 | None:intergenic | 45.0% | |
GGAGAAGTAGGAGACAACAT+AGG | + | tig0030275:7681-7700 | None:intergenic | 45.0% | |
GTTGTCTCCTACTTCTCCAA+TGG | - | tig0030275:7683-7702 | Msa1443000:exon | 45.0% | |
TCATTACCCAAGGGTCTTTG+AGG | + | tig0030275:7813-7832 | None:intergenic | 45.0% | |
TCTATAACATTGGGACCCCA+AGG | - | tig0030275:7834-7853 | Msa1443000:intron | 45.0% | |
TGAATTTGTCGGTCCTCTAC+TGG | + | tig0030275:7880-7899 | None:intergenic | 45.0% | |
TTATCTGAGCGCACATCGTA+TGG | - | tig0030275:7978-7997 | Msa1443000:five_prime_UTR | 45.0% | |
TCATATCCAGCTGGACTTGA+AGG | + | tig0030275:8044-8063 | None:intergenic | 45.0% | |
GTACTCTCTGATTGCTGACA+AGG | + | tig0030275:8228-8247 | None:intergenic | 45.0% | |
!!! | TTTTTTTTAATTTTCTTTTT+TGG | + | tig0030275:5323-5342 | None:intergenic | 5.0% |
!! | AAATTAAAAAAAATTAAATG+TGG | - | tig0030275:5330-5349 | Msa1443000:intron | 5.0% |
TACTGAGAGAGAGAGAGAGG+GGG | + | tig0030275:876-895 | None:intergenic | 50.0% | |
GTACTGAGAGAGAGAGAGAG+GGG | + | tig0030275:877-896 | None:intergenic | 50.0% | |
! | CAGTACTGAGAGAGAGAGAG+AGG | + | tig0030275:879-898 | None:intergenic | 50.0% |
TTAGAGGAGAGTGACGAAGC+CGG | + | tig0030275:1304-1323 | None:intergenic | 50.0% | |
CGTCACTCTCCTCTAATAGG+AGG | - | tig0030275:1308-1327 | Msa1443000:CDS | 50.0% | |
! | GACTCGAATGAGCGAGTTGA+AGG | - | tig0030275:1610-1629 | Msa1443000:CDS | 50.0% |
! | CGAGCAGCGTAAGTACTGTT+TGG | + | tig0030275:2597-2616 | None:intergenic | 50.0% |
CATGTACAACCGCAGATGCA+TGG | - | tig0030275:2636-2655 | Msa1443000:CDS | 50.0% | |
!! | GGTAGGATAGGAGCATCTGA+TGG | - | tig0030275:2869-2888 | Msa1443000:CDS | 50.0% |
CTGAATCAACAGCTGCACAG+AGG | - | tig0030275:2909-2928 | Msa1443000:CDS | 50.0% | |
CTTAGCAGGGCTTGTAGGAA+CGG | + | tig0030275:2996-3015 | None:intergenic | 50.0% | |
GTTCCTACAAGCCCTGCTAA+GGG | - | tig0030275:2995-3014 | Msa1443000:CDS | 50.0% | |
ATACCCTTAGCAGGGCTTGT+AGG | + | tig0030275:3001-3020 | None:intergenic | 50.0% | |
!! | TCCTGGTGTTATGAATGGGG+TGG | - | tig0030275:3213-3232 | Msa1443000:intron | 50.0% |
! | AGATGAGCAGAAGCGTGATC+AGG | - | tig0030275:3366-3385 | Msa1443000:intron | 50.0% |
CTACTTCCCAATGCTTCCGA+AGG | - | tig0030275:3460-3479 | Msa1443000:intron | 50.0% | |
AGATACTCATCTGGGGGCTA+AGG | - | tig0030275:3748-3767 | Msa1443000:CDS | 50.0% | |
TCTGGGGGCTAAGGCTAAAA+AGG | - | tig0030275:3757-3776 | Msa1443000:CDS | 50.0% | |
CCAGGTACAGGAACAACAGA+AGG | + | tig0030275:3827-3846 | None:intergenic | 50.0% | |
CCTTCTGTTGTTCCTGTACC+TGG | - | tig0030275:3824-3843 | Msa1443000:intron | 50.0% | |
GATGGCTGTGACTGCTGAAA+TGG | + | tig0030275:3866-3885 | None:intergenic | 50.0% | |
GGACCGCCAAACTGTAAAGA+TGG | + | tig0030275:3884-3903 | None:intergenic | 50.0% | |
TGTTGGACAAGTGCAACAGC+CGG | - | tig0030275:3982-4001 | Msa1443000:CDS | 50.0% | |
ATTGGATGAGGCTGAAGACC+TGG | + | tig0030275:4016-4035 | None:intergenic | 50.0% | |
! | CCATGAGAGTGCATTGGATG+AGG | + | tig0030275:4028-4047 | None:intergenic | 50.0% |
CCTCATCCAATGCACTCTCA+TGG | - | tig0030275:4025-4044 | Msa1443000:CDS | 50.0% | |
CCCATGTTGCCCATTTGATG+GGG | + | tig0030275:4106-4125 | None:intergenic | 50.0% | |
CCCCATCAAATGGGCAACAT+GGG | - | tig0030275:4103-4122 | Msa1443000:CDS | 50.0% | |
GCCCATGTTGCCCATTTGAT+GGG | + | tig0030275:4107-4126 | None:intergenic | 50.0% | |
TGCCCATGTTGCCCATTTGA+TGG | + | tig0030275:4108-4127 | None:intergenic | 50.0% | |
CAAATGGGCAACATGGGCAT+TGG | - | tig0030275:4109-4128 | Msa1443000:CDS | 50.0% | |
AAATTTCCACCCTGCTGCTG+GGG | + | tig0030275:4151-4170 | None:intergenic | 50.0% | |
CAAAATTTCCACCCTGCTGC+TGG | + | tig0030275:4153-4172 | None:intergenic | 50.0% | |
! | GCAGCAGGGTGGAAATTTTG+CGG | - | tig0030275:4153-4172 | Msa1443000:CDS | 50.0% |
! | CAGCAGGGTGGAAATTTTGC+GGG | - | tig0030275:4154-4173 | Msa1443000:CDS | 50.0% |
CTGGAACTATATGAGCCGGA+AGG | + | tig0030275:4361-4380 | None:intergenic | 50.0% | |
AGGTGGATAATAGGGAGGAC+TGG | + | tig0030275:4380-4399 | None:intergenic | 50.0% | |
CTAGGAGGTGGATAATAGGG+AGG | + | tig0030275:4385-4404 | None:intergenic | 50.0% | |
AACGGAAGAGAACTAGGAGG+TGG | + | tig0030275:4397-4416 | None:intergenic | 50.0% | |
!! | GCTGAGTGTTGGGAGTTATC+TGG | + | tig0030275:4429-4448 | None:intergenic | 50.0% |
TCACGAGAACGTTCTGCAGT+GGG | + | tig0030275:4574-4593 | None:intergenic | 50.0% | |
TTCACGAGAACGTTCTGCAG+TGG | + | tig0030275:4575-4594 | None:intergenic | 50.0% | |
GACATCATCAGCTTCAACGG+GGG | - | tig0030275:4606-4625 | Msa1443000:CDS | 50.0% | |
GAGATTTCCGAGGAGGTTTC+GGG | + | tig0030275:4715-4734 | None:intergenic | 50.0% | |
CTGTGTAGAGATTTCCGAGG+AGG | + | tig0030275:4722-4741 | None:intergenic | 50.0% | |
ACCTACATCAGCTGTGACTG+TGG | - | tig0030275:4834-4853 | Msa1443000:CDS | 50.0% | |
TCCACAGTCACAGCTGATGT+AGG | + | tig0030275:4838-4857 | None:intergenic | 50.0% | |
ACTAACAGGTTCCCTCGTGT+TGG | + | tig0030275:4890-4909 | None:intergenic | 50.0% | |
ACACGAGGGAACCTGTTAGT+AGG | - | tig0030275:4890-4909 | Msa1443000:CDS | 50.0% | |
GACTGCATACTAGCCACTGT+AGG | + | tig0030275:5085-5104 | None:intergenic | 50.0% | |
TCGATGTCCCATTCAGTGTC+AGG | - | tig0030275:5909-5928 | Msa1443000:CDS | 50.0% | |
CCTTGGTACCTGACACTGAA+TGG | + | tig0030275:5920-5939 | None:intergenic | 50.0% | |
CCATTCAGTGTCAGGTACCA+AGG | - | tig0030275:5917-5936 | Msa1443000:CDS | 50.0% | |
GGTGCAGTAAGCGAGAAAAG+TGG | - | tig0030275:6167-6186 | Msa1443000:intron | 50.0% | |
ATCCTCCCAGTCATCAGGTT+CGG | + | tig0030275:6204-6223 | None:intergenic | 50.0% | |
CGTGATTCACATCCTAGTCC+TGG | - | tig0030275:6422-6441 | Msa1443000:intron | 50.0% | |
GTCCTGGAAGAACTGTAGAC+AGG | - | tig0030275:6438-6457 | Msa1443000:intron | 50.0% | |
GACCTGTCTACAGTTCTTCC+AGG | + | tig0030275:6443-6462 | None:intergenic | 50.0% | |
! | AATTCTGGGCGTGGTTTGGA+TGG | - | tig0030275:6530-6549 | Msa1443000:intron | 50.0% |
!! | GGTAGTGGTGGATTTCGACA+TGG | - | tig0030275:6551-6570 | Msa1443000:intron | 50.0% |
! | CATGGCCAAGGAGGCAATTT+TGG | - | tig0030275:6569-6588 | Msa1443000:intron | 50.0% |
ATCGCCCCACCATATTGGAT+GGG | + | tig0030275:6623-6642 | None:intergenic | 50.0% | |
AAAGGATCGCCCCACCATAT+TGG | + | tig0030275:6628-6647 | None:intergenic | 50.0% | |
! | CAGATTGCATTGGCCCAGAA+AGG | + | tig0030275:6646-6665 | None:intergenic | 50.0% |
CTTTCTGGGCCAATGCAATC+TGG | - | tig0030275:6644-6663 | Msa1443000:intron | 50.0% | |
TTCTGGGCCAATGCAATCTG+GGG | - | tig0030275:6646-6665 | Msa1443000:intron | 50.0% | |
TGATGTGCCCCAGATTGCAT+TGG | + | tig0030275:6656-6675 | None:intergenic | 50.0% | |
! | AATGCAATCTGGGGCACATC+AGG | - | tig0030275:6655-6674 | Msa1443000:intron | 50.0% |
! | ATGCAATCTGGGGCACATCA+GGG | - | tig0030275:6656-6675 | Msa1443000:intron | 50.0% |
GCAAAGAAATAGCCCTGACG+GGG | - | tig0030275:6685-6704 | Msa1443000:intron | 50.0% | |
! | TTCTGCTAGCTTCCAGCAGA+GGG | - | tig0030275:6721-6740 | Msa1443000:intron | 50.0% |
GCATCATCTGTAAGGGAGAC+TGG | + | tig0030275:6763-6782 | None:intergenic | 50.0% | |
ATGCAGAAGAGGCAAAGCAG+AGG | - | tig0030275:6822-6841 | Msa1443000:intron | 50.0% | |
GACAACGCAATCACTCTCAC+TGG | - | tig0030275:6923-6942 | Msa1443000:intron | 50.0% | |
TGCCAACTTCTGCTCACATC+TGG | - | tig0030275:7003-7022 | Msa1443000:intron | 50.0% | |
AGCCAGATGTGAGCAGAAGT+TGG | + | tig0030275:7008-7027 | None:intergenic | 50.0% | |
TGCCAGGAGGAATTTGAGAG+GGG | - | tig0030275:7094-7113 | Msa1443000:intron | 50.0% | |
TGACAGTTTGACCTCACCCT+CGG | + | tig0030275:7158-7177 | None:intergenic | 50.0% | |
AAGGGAGCAGAGAAGAACCA+AGG | - | tig0030275:7186-7205 | Msa1443000:intron | 50.0% | |
TAACATGCGCCTTCTTGCCT+TGG | + | tig0030275:7206-7225 | None:intergenic | 50.0% | |
! | AAGGCAAGAAGGCGCATGTT+AGG | - | tig0030275:7205-7224 | Msa1443000:intron | 50.0% |
TCAGTGTCAGGATCCTGATG+AGG | - | tig0030275:7312-7331 | Msa1443000:intron | 50.0% | |
GCCTCAACATCTTCCTCATC+AGG | + | tig0030275:7328-7347 | None:intergenic | 50.0% | |
ACAGAGATGCTGTGCAAGAG+AGG | - | tig0030275:7562-7581 | Msa1443000:CDS | 50.0% | |
!! | AGGCTCAAGCACAAGTTGGT+AGG | - | tig0030275:7586-7605 | Msa1443000:CDS | 50.0% |
ATCTGCAAGAAGGAACCCCA+TGG | - | tig0030275:7635-7654 | Msa1443000:CDS | 50.0% | |
!! | CCCATGGATTTTGGTCCTAG+AGG | - | tig0030275:7651-7670 | Msa1443000:CDS | 50.0% |
TCTCCTACTTCTCCAATGGG+TGG | - | tig0030275:7687-7706 | Msa1443000:exon | 50.0% | |
ATAACATTGGGACCCCAAGG+TGG | - | tig0030275:7837-7856 | Msa1443000:intron | 50.0% | |
GCATTCTGTGAGAGTCTCCA+GGG | + | tig0030275:7932-7951 | None:intergenic | 50.0% | |
GACTCTCACAGAATGCCTAG+CGG | - | tig0030275:7936-7955 | Msa1443000:five_prime_UTR | 50.0% | |
AGCGCACATCGTATGGCAAT+AGG | - | tig0030275:7985-8004 | Msa1443000:five_prime_UTR | 50.0% | |
GCGCACATCGTATGGCAATA+GGG | - | tig0030275:7986-8005 | Msa1443000:five_prime_UTR | 50.0% | |
CACATCGTATGGCAATAGGG+AGG | - | tig0030275:7989-8008 | Msa1443000:five_prime_UTR | 50.0% | |
TGAGAGACAATTGGCCCTTG+CGG | + | tig0030275:8170-8189 | None:intergenic | 50.0% | |
ACTGAGAGAGAGAGAGAGGG+GGG | + | tig0030275:875-894 | None:intergenic | 55.0% | |
AATCAGCAGAGAGGTCCCTC+AGG | - | tig0030275:1247-1266 | Msa1443000:CDS | 55.0% | |
TCCCTCAGGTGGTCATGGAA+GGG | - | tig0030275:1261-1280 | Msa1443000:CDS | 55.0% | |
GTCATTGTGGTGTGTCCACG+TGG | - | tig0030275:1867-1886 | Msa1443000:CDS | 55.0% | |
GCTGCTCGGACCATGCATAA+CGG | - | tig0030275:2609-2628 | Msa1443000:CDS | 55.0% | |
!! | GATAGGAGCATCTGATGGGC+CGG | - | tig0030275:2874-2893 | Msa1443000:CDS | 55.0% |
! | ATCTGATGGGCCGGTTGCAA+AGG | - | tig0030275:2883-2902 | Msa1443000:CDS | 55.0% |
! | GTTGGTTCAGAGCTCACAGG+GGG | + | tig0030275:2974-2993 | None:intergenic | 55.0% |
! | GGTTGGTTCAGAGCTCACAG+GGG | + | tig0030275:2975-2994 | None:intergenic | 55.0% |
! | CGGTTGGTTCAGAGCTCACA+GGG | + | tig0030275:2976-2995 | None:intergenic | 55.0% |
! | ACGGTTGGTTCAGAGCTCAC+AGG | + | tig0030275:2977-2996 | None:intergenic | 55.0% |
CGTTCCTACAAGCCCTGCTA+AGG | - | tig0030275:2994-3013 | Msa1443000:CDS | 55.0% | |
GCCACCCCATTCATAACACC+AGG | + | tig0030275:3217-3236 | None:intergenic | 55.0% | |
! | AGGGATTGGCACTGAAGGCA+CGG | + | tig0030275:3663-3682 | None:intergenic | 55.0% |
! | GCAGTAGGGATTGGCACTGA+AGG | + | tig0030275:3668-3687 | None:intergenic | 55.0% |
TGCTTCGGAGCAGTAGGGAT+TGG | + | tig0030275:3677-3696 | None:intergenic | 55.0% | |
GGTGTCAAAGCTGGCAACTG+GGG | + | tig0030275:3785-3804 | None:intergenic | 55.0% | |
! | CGGTGTCAAAGCTGGCAACT+GGG | + | tig0030275:3786-3805 | None:intergenic | 55.0% |
! | CCAGTTGCCAGCTTTGACAC+CGG | - | tig0030275:3784-3803 | Msa1443000:intron | 55.0% |
CAACAGAAGGCCTCTGCATC+TGG | + | tig0030275:3814-3833 | None:intergenic | 55.0% | |
! | GGCATTGAAAGCCCAGGTAC+AGG | + | tig0030275:3839-3858 | None:intergenic | 55.0% |
!! | GGTGTTGGCATTGAAAGCCC+AGG | + | tig0030275:3845-3864 | None:intergenic | 55.0% |
GCCCCATCAAATGGGCAACA+TGG | - | tig0030275:4102-4121 | Msa1443000:CDS | 55.0% | |
!! | ATGGTGGGTCATCTGGTGCT+AGG | - | tig0030275:4263-4282 | Msa1443000:CDS | 55.0% |
CGAAGGCTGAGAAGCAGCAA+TGG | + | tig0030275:4329-4348 | None:intergenic | 55.0% | |
GTGGGAGCTTCAGCAATGTG+AGG | + | tig0030275:4556-4575 | None:intergenic | 55.0% | |
ACTGGGGTTTCCACACCTGT+AGG | - | tig0030275:5133-5152 | Msa1443000:CDS | 55.0% | |
CTCCAGAAAGCAGATGCTGC+CGG | - | tig0030275:6008-6027 | Msa1443000:intron | 55.0% | |
TCCAGAAAGCAGATGCTGCC+GGG | - | tig0030275:6009-6028 | Msa1443000:intron | 55.0% | |
AGGTCAAGGATGGAACACCG+TGG | - | tig0030275:6458-6477 | Msa1443000:intron | 55.0% | |
GGTCAAGGATGGAACACCGT+GGG | - | tig0030275:6459-6478 | Msa1443000:intron | 55.0% | |
GGAACACCGTGGGAATGTTG+TGG | - | tig0030275:6469-6488 | Msa1443000:intron | 55.0% | |
CCTCAGCCACAACATTCCCA+CGG | + | tig0030275:6478-6497 | None:intergenic | 55.0% | |
!! | CGTGGTTTGGATGGTAGTGG+TGG | - | tig0030275:6539-6558 | Msa1443000:intron | 55.0% |
! | GGTGGATTTCGACATGGCCA+AGG | - | tig0030275:6557-6576 | Msa1443000:intron | 55.0% |
GGATTTCGACATGGCCAAGG+AGG | - | tig0030275:6560-6579 | Msa1443000:intron | 55.0% | |
CCACCATATTGGATGGGTGC+CGG | + | tig0030275:6617-6636 | None:intergenic | 55.0% | |
CGGCACCCATCCAATATGGT+GGG | - | tig0030275:6615-6634 | Msa1443000:intron | 55.0% | |
GGCACCCATCCAATATGGTG+GGG | - | tig0030275:6616-6635 | Msa1443000:intron | 55.0% | |
GATCGCCCCACCATATTGGA+TGG | + | tig0030275:6624-6643 | None:intergenic | 55.0% | |
! | TATGGTGGGGCGATCCTTTC+TGG | - | tig0030275:6629-6648 | Msa1443000:intron | 55.0% |
! | ATGGTGGGGCGATCCTTTCT+GGG | - | tig0030275:6630-6649 | Msa1443000:intron | 55.0% |
! | GTTCTGCTAGCTTCCAGCAG+AGG | - | tig0030275:6720-6739 | Msa1443000:intron | 55.0% |
! | TCTGCTAGCTTCCAGCAGAG+GGG | - | tig0030275:6722-6741 | Msa1443000:intron | 55.0% |
TGTAAGGGAGACTGGGGAGA+AGG | + | tig0030275:6755-6774 | None:intergenic | 55.0% | |
CACCCCTCTCAAATTCCTCC+TGG | + | tig0030275:7099-7118 | None:intergenic | 55.0% | |
AGATGCTGTGCAAGAGAGGC+AGG | - | tig0030275:7566-7585 | Msa1443000:CDS | 55.0% | |
AGGCAGGCTCAAGCACAAGT+TGG | - | tig0030275:7582-7601 | Msa1443000:CDS | 55.0% | |
!! | CAAGTTGGTAGGATGGGTCG+TGG | - | tig0030275:7597-7616 | Msa1443000:CDS | 55.0% |
TGGTAGGATGGGTCGTGGTA+TGG | - | tig0030275:7602-7621 | Msa1443000:CDS | 55.0% | |
GGTAGGATGGGTCGTGGTAT+GGG | - | tig0030275:7603-7622 | Msa1443000:CDS | 55.0% | |
GGTCCACCCATTGGAGAAGT+AGG | + | tig0030275:7693-7712 | None:intergenic | 55.0% | |
GTTTGAGTAGACAGCCCACG+CGG | + | tig0030275:7714-7733 | None:intergenic | 55.0% | |
GGGCTGTCTACTCAAACACG+TGG | - | tig0030275:7717-7736 | Msa1443000:five_prime_UTR | 55.0% | |
! | ACCCCAAGGTGGTCTTGCTA+GGG | - | tig0030275:7848-7867 | Msa1443000:intron | 55.0% |
TCCCCTAGCAAGACCACCTT+GGG | + | tig0030275:7853-7872 | None:intergenic | 55.0% | |
TTCCCCTAGCAAGACCACCT+TGG | + | tig0030275:7854-7873 | None:intergenic | 55.0% | |
GCTAGGGGAATGTCCAGTAG+AGG | - | tig0030275:7864-7883 | Msa1443000:intron | 55.0% | |
GGCATTCTGTGAGAGTCTCC+AGG | + | tig0030275:7933-7952 | None:intergenic | 55.0% | |
GACAGACCTTCAAGTCCAGC+TGG | - | tig0030275:8035-8054 | Msa1443000:five_prime_UTR | 55.0% | |
GCGTGAGGTGATGTTGCAAC+AGG | + | tig0030275:8143-8162 | None:intergenic | 55.0% | |
AGAGAGAGAGGGGGGAGAGA+GGG | + | tig0030275:867-886 | None:intergenic | 60.0% | |
AGAGGTCCCTCAGGTGGTCA+TGG | - | tig0030275:1256-1275 | Msa1443000:CDS | 60.0% | |
GTCCCTCAGGTGGTCATGGA+AGG | - | tig0030275:1260-1279 | Msa1443000:CDS | 60.0% | |
CCCCTTCCATGACCACCTGA+GGG | + | tig0030275:1265-1284 | None:intergenic | 60.0% | |
CCCTCAGGTGGTCATGGAAG+GGG | - | tig0030275:1262-1281 | Msa1443000:CDS | 60.0% | |
ACAGGGGGCGGTTGAGAAGT+TGG | + | tig0030275:2959-2978 | None:intergenic | 60.0% | |
GCAGGGCTTGTAGGAACGGT+TGG | + | tig0030275:2992-3011 | None:intergenic | 60.0% | |
GGAGCTGAGCTTGTACGAGC+AGG | + | tig0030275:3337-3356 | None:intergenic | 60.0% | |
! | GGGATTGGCACTGAAGGCAC+GGG | + | tig0030275:3662-3681 | None:intergenic | 60.0% |
! | GCTGCTGCTTCGGAGCAGTA+GGG | + | tig0030275:3682-3701 | None:intergenic | 60.0% |
! | TGCTGCTGCTTCGGAGCAGT+AGG | + | tig0030275:3683-3702 | None:intergenic | 60.0% |
! | CTAGGTGGCTGCTGCTGCTT+CGG | + | tig0030275:3692-3711 | None:intergenic | 60.0% |
! | CCGGTGTCAAAGCTGGCAAC+TGG | + | tig0030275:3787-3806 | None:intergenic | 60.0% |
! | TGGCTTGCCGGTGTCAAAGC+TGG | + | tig0030275:3794-3813 | None:intergenic | 60.0% |
!! | GGCAACATGGGCATTGGCAC+CGG | - | tig0030275:4115-4134 | Msa1443000:CDS | 60.0% |
CCTGCTGCTGGGGATATGGA+GGG | + | tig0030275:4141-4160 | None:intergenic | 60.0% | |
CCTCCATATCCCCAGCAGCA+GGG | - | tig0030275:4139-4158 | Msa1443000:CDS | 60.0% | |
TCCCGGCAGCATCTGCTTTC+TGG | + | tig0030275:6013-6032 | None:intergenic | 60.0% | |
AGCCGAACCTGATGACTGGG+AGG | - | tig0030275:6199-6218 | Msa1443000:intron | 60.0% | |
GCTGCATCCTCCCAGTCATC+AGG | + | tig0030275:6209-6228 | None:intergenic | 60.0% | |
CCGTGGGAATGTTGTGGCTG+AGG | - | tig0030275:6475-6494 | Msa1443000:intron | 60.0% | |
! | GGGCGTGGTTTGGATGGTAG+TGG | - | tig0030275:6536-6555 | Msa1443000:intron | 60.0% |
GGACCGGCACCCATCCAATA+TGG | - | tig0030275:6611-6630 | Msa1443000:intron | 60.0% | |
CCGGCACCCATCCAATATGG+TGG | - | tig0030275:6614-6633 | Msa1443000:intron | 60.0% | |
! | CAATCTGGGGCACATCAGGG+TGG | - | tig0030275:6659-6678 | Msa1443000:intron | 60.0% |
GAAATAGCCCTGACGGGGAG+AGG | - | tig0030275:6690-6709 | Msa1443000:intron | 60.0% | |
! | GACCCCAAGGTGGTCTTGCT+AGG | - | tig0030275:7847-7866 | Msa1443000:intron | 60.0% |
CCCCTAGCAAGACCACCTTG+GGG | + | tig0030275:7852-7871 | None:intergenic | 60.0% | |
! | CCCCAAGGTGGTCTTGCTAG+GGG | - | tig0030275:7849-7868 | Msa1443000:intron | 60.0% |
CCAGGGCCAGAATGCACATC+AGG | + | tig0030275:7915-7934 | None:intergenic | 60.0% | |
CCTGATGTGCATTCTGGCCC+TGG | - | tig0030275:7912-7931 | Msa1443000:intron | 60.0% | |
AGAGAGGGGGGAGAGAGGGA+GGG | + | tig0030275:863-882 | None:intergenic | 65.0% | |
GAGAGAGAGAGGGGGGAGAG+AGG | + | tig0030275:868-887 | None:intergenic | 65.0% | |
CAGCAGAGAGGTCCCTCAGG+TGG | - | tig0030275:1250-1269 | Msa1443000:CDS | 65.0% | |
GCCCCTTCCATGACCACCTG+AGG | + | tig0030275:1266-1285 | None:intergenic | 65.0% | |
GGTGGTCATGGAAGGGGCAG+CGG | - | tig0030275:1268-1287 | Msa1443000:CDS | 65.0% | |
AGAGTGACGAAGCCGGTGCG+CGG | + | tig0030275:1297-1316 | None:intergenic | 65.0% | |
GGTTCAGAGCTCACAGGGGG+CGG | + | tig0030275:2971-2990 | None:intergenic | 65.0% | |
CGAAGCAGCAGCAGCCACCT+AGG | - | tig0030275:3690-3709 | Msa1443000:CDS | 65.0% | |
CACCGGCAAGCCAGATGCAG+AGG | - | tig0030275:3801-3820 | Msa1443000:intron | 65.0% | |
! | GGCCTCTGCATCTGGCTTGC+CGG | + | tig0030275:3806-3825 | None:intergenic | 65.0% |
CTGCTGGGGATATGGAGGGC+CGG | + | tig0030275:4137-4156 | None:intergenic | 65.0% | |
CCCTCCATATCCCCAGCAGC+AGG | - | tig0030275:4138-4157 | Msa1443000:CDS | 65.0% | |
CCCTGCTGCTGGGGATATGG+AGG | + | tig0030275:4142-4161 | None:intergenic | 65.0% | |
CCACCCTGCTGCTGGGGATA+TGG | + | tig0030275:4145-4164 | None:intergenic | 65.0% | |
CCATATCCCCAGCAGCAGGG+TGG | - | tig0030275:4142-4161 | Msa1443000:CDS | 65.0% | |
ATAGCCCTGACGGGGAGAGG+TGG | - | tig0030275:6693-6712 | Msa1443000:intron | 65.0% | |
GTTGCCACCTCTCCCCGTCA+GGG | + | tig0030275:6700-6719 | None:intergenic | 65.0% | |
!! | GGTTGATGAGGCCGAGGGTG+AGG | - | tig0030275:7144-7163 | Msa1443000:intron | 65.0% |
TCTCCAATGGGTGGACCGCG+TGG | - | tig0030275:7696-7715 | Msa1443000:five_prime_UTR | 65.0% | |
CTCCAATGGGTGGACCGCGT+GGG | - | tig0030275:7697-7716 | Msa1443000:five_prime_UTR | 65.0% | |
TCACCTCACGCTCAGCCGCA+AGG | - | tig0030275:8152-8171 | Msa1443000:five_prime_UTR | 65.0% | |
CACCTCACGCTCAGCCGCAA+GGG | - | tig0030275:8153-8172 | Msa1443000:five_prime_UTR | 65.0% | |
AGGGGGGAGAGAGGGAGGGA+GGG | + | tig0030275:859-878 | None:intergenic | 70.0% | |
GAGAGAGGGGGGAGAGAGGG+AGG | + | tig0030275:864-883 | None:intergenic | 70.0% | |
GGTCATGGAAGGGGCAGCGG+TGG | - | tig0030275:1271-1290 | Msa1443000:CDS | 70.0% | |
!! | TGGATGGGTGCCGGTCCACG+AGG | + | tig0030275:6608-6627 | None:intergenic | 70.0% |
CGTTGCCACCTCTCCCCGTC+AGG | + | tig0030275:6701-6720 | None:intergenic | 70.0% | |
AGCCCACGCGGTCCACCCAT+TGG | + | tig0030275:7702-7721 | None:intergenic | 70.0% | |
GGGGGGAGAGAGGGAGGGAG+GGG | + | tig0030275:858-877 | None:intergenic | 75.0% | |
GAGGGGGGAGAGAGGGAGGG+AGG | + | tig0030275:860-879 | None:intergenic | 75.0% | |
GGCCCTTGCGGCTGAGCGTG+AGG | + | tig0030275:8158-8177 | None:intergenic | 75.0% | |
! | GGGCAGCGGTGGCCGCGCAC+CGG | - | tig0030275:1282-1301 | Msa1443000:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0030275 | gene | 611 | 8252 | 611 | ID=Msa1443000;Name=Msa1443000 |
tig0030275 | mRNA | 611 | 8252 | 611 | ID=Msa1443000-mRNA-1;Parent=Msa1443000;Name=Msa1443000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=428|1|1|1|0.87|0.77|9|412|1371 |
tig0030275 | exon | 611 | 3031 | 611 | ID=Msa1443000-mRNA-1:exon:13686;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 3583 | 3796 | 3583 | ID=Msa1443000-mRNA-1:exon:13685;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 3888 | 5225 | 3888 | ID=Msa1443000-mRNA-1:exon:13684;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 5476 | 5532 | 5476 | ID=Msa1443000-mRNA-1:exon:13683;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 5626 | 5693 | 5626 | ID=Msa1443000-mRNA-1:exon:13682;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 5847 | 5984 | 5847 | ID=Msa1443000-mRNA-1:exon:13681;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 6206 | 6342 | 6206 | ID=Msa1443000-mRNA-1:exon:13680;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 7534 | 7786 | 7534 | ID=Msa1443000-mRNA-1:exon:13679;Parent=Msa1443000-mRNA-1 |
tig0030275 | exon | 7923 | 8252 | 7923 | ID=Msa1443000-mRNA-1:exon:13678;Parent=Msa1443000-mRNA-1 |
tig0030275 | five_prime_UTR | 7923 | 8252 | 7923 | ID=Msa1443000-mRNA-1:five_prime_utr;Parent=Msa1443000-mRNA-1 |
tig0030275 | five_prime_UTR | 7689 | 7786 | 7689 | ID=Msa1443000-mRNA-1:five_prime_utr;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 7534 | 7688 | 7534 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 6206 | 6342 | 6206 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 5847 | 5984 | 5847 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 5626 | 5693 | 5626 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 5476 | 5532 | 5476 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 3888 | 5225 | 3888 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 3583 | 3796 | 3583 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | CDS | 1023 | 3031 | 1023 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
tig0030275 | three_prime_UTR | 611 | 1022 | 611 | ID=Msa1443000-mRNA-1:three_prime_utr;Parent=Msa1443000-mRNA-1 |
Gene Sequence |
Protein sequence |