Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443000 | sp|Q76E23|IF4G_ARATH | 42.733 | 1376 | 644 | 36 | 1 | 1276 | 1 | 1332 | 0.0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443000 | A0A396GAE6 | 95.533 | 1276 | 56 | 1 | 1 | 1276 | 1 | 1275 | 0.0 | 2343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1404220 | Msa1443000 | 0.812415 | 4.288369e-51 | -8.615850e-47 |
| Msa1229430 | Msa1443000 | 0.916972 | 9.354876e-86 | -8.615850e-47 |
| Msa1256070 | Msa1443000 | 0.834719 | 2.547094e-56 | -8.615850e-47 |
| Msa1279490 | Msa1443000 | 0.826019 | 3.413600e-54 | -8.615850e-47 |
| Msa1309700 | Msa1443000 | 0.929484 | 6.502997e-93 | -8.615850e-47 |
| Msa0378410 | Msa1443000 | 0.827694 | 1.358277e-54 | -8.615850e-47 |
| Msa1083420 | Msa1443000 | 0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa1165370 | Msa1443000 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443000 | MtrunA17_Chr8g0336451 | 95.533 | 1276 | 56 | 1 | 1 | 1276 | 1 | 1275 | 0.0 | 2343 |
| Msa1443000 | MtrunA17_Chr7g0233281 | 73.175 | 589 | 144 | 7 | 700 | 1276 | 803 | 1389 | 0.0 | 860 |
| Msa1443000 | MtrunA17_Chr8g0335521 | 89.697 | 165 | 17 | 0 | 1085 | 1249 | 1 | 165 | 3.31e-96 | 305 |
| Msa1443000 | MtrunA17_Chr8g0335511 | 86.400 | 125 | 15 | 1 | 1085 | 1207 | 1 | 125 | 3.01e-65 | 217 |
| Msa1443000 | MtrunA17_Chr4g0073751 | 45.968 | 248 | 120 | 6 | 1029 | 1269 | 194 | 434 | 1.79e-53 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443000 | AT3G60240.2 | 43.033 | 1378 | 633 | 38 | 1 | 1276 | 1 | 1328 | 0.0 | 875 |
| Msa1443000 | AT3G60240.3 | 42.733 | 1376 | 642 | 37 | 1 | 1276 | 1 | 1330 | 0.0 | 874 |
| Msa1443000 | AT3G60240.4 | 42.733 | 1376 | 644 | 36 | 1 | 1276 | 1 | 1332 | 0.0 | 873 |
| Msa1443000 | AT5G57870.1 | 44.068 | 236 | 121 | 4 | 1040 | 1269 | 217 | 447 | 3.39e-50 | 192 |
| Msa1443000 | AT5G57870.2 | 44.068 | 236 | 121 | 4 | 1040 | 1269 | 213 | 443 | 3.44e-50 | 192 |
| Msa1443000 | AT2G24050.1 | 40.000 | 290 | 147 | 9 | 994 | 1269 | 130 | 406 | 3.52e-49 | 188 |
| Msa1443000 | AT1G62410.1 | 36.923 | 195 | 112 | 4 | 1070 | 1259 | 8 | 196 | 2.95e-31 | 123 |
Find 464 sgRNAs with CRISPR-Local
Find 678 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGTGGGGCGATCCTTTC+TGG | 0.026717 | tig0030275:-2212 | Msa1443000:CDS |
| TCCCGGCAGCATCTGCTTTC+TGG | 0.082190 | tig0030275:+2831 | None:intergenic |
| CTTAGCTCTTCATGCGTTTC+AGG | 0.098207 | tig0030275:+4630 | None:intergenic |
| TTGATTTCCTTGGTTGTTTC+TGG | 0.118602 | tig0030275:+2983 | None:intergenic |
| GTACCTTAAAAGTTGAAATT+AGG | 0.120700 | tig0030275:+7919 | None:intergenic |
| AGAACTAGGAGGTGGATAAT+AGG | 0.157573 | tig0030275:+4455 | None:intergenic |
| ACAACATGAATTTATCTTCT+AGG | 0.172827 | tig0030275:-1395 | Msa1443000:CDS |
| GCCTTATTTGGTTCTAAATT+TGG | 0.176203 | tig0030275:+2896 | None:intergenic |
| TCCACAATCTCTTCCAATTC+TGG | 0.178388 | tig0030275:-8045 | Msa1443000:five_prime_UTR |
| CATGGCCAAGGAGGCAATTT+TGG | 0.188751 | tig0030275:-2272 | Msa1443000:CDS |
| AGAAGGAACCCCATGGATTT+TGG | 0.230347 | tig0030275:-1199 | Msa1443000:CDS |
| CCTTCTGTTGTTCCTGTACC+TGG | 0.234309 | tig0030275:-5017 | Msa1443000:CDS |
| AGAAACACCACTTGGTTTAA+TGG | 0.250784 | tig0030275:+4203 | None:intergenic |
| AAGAGCTAAGGCTTGATAAA+AGG | 0.251510 | tig0030275:-4617 | Msa1443000:CDS |
| CCACCCTGCTGCTGGGGATA+TGG | 0.253060 | tig0030275:+4699 | None:intergenic |
| GGTCTTTGAGGATAATTAAT+TGG | 0.254328 | tig0030275:+1043 | None:intergenic |
| CTTTCTGGGCCAATGCAATC+TGG | 0.254519 | tig0030275:-2197 | Msa1443000:CDS |
| ATGCACAAGGTGGGCAATAT+AGG | 0.265405 | tig0030275:-6300 | Msa1443000:CDS |
| GAGATTTCCGAGGAGGTTTC+GGG | 0.273588 | tig0030275:+4129 | None:intergenic |
| GTTAATGTGTGTGAAGATTA+AGG | 0.276632 | tig0030275:+8130 | None:intergenic |
| TGAGATTGAATTTGTGGATT+AGG | 0.278140 | tig0030275:+4939 | None:intergenic |
| GAACAATGGTCCACAAAATA+TGG | 0.282799 | tig0030275:-4370 | Msa1443000:CDS |
| ACCAAATTTAGAACCAAATA+AGG | 0.285072 | tig0030275:-2897 | Msa1443000:CDS |
| CCAACATTTCCGATTGGTAT+AGG | 0.288031 | tig0030275:+4876 | None:intergenic |
| TACCTTAAAAGTTGAAATTA+GGG | 0.290022 | tig0030275:+7920 | None:intergenic |
| ATCCATATGTTCCTTAGCTT+TGG | 0.290292 | tig0030275:+1449 | None:intergenic |
| AGAACAAGAAGAGGCAAATA+AGG | 0.298146 | tig0030275:-1718 | Msa1443000:CDS |
| GATCTTTATAATGCATATAA+AGG | 0.298524 | tig0030275:-2800 | Msa1443000:CDS |
| CGCTTCTGCTCATCTAAATT+AGG | 0.302789 | tig0030275:+5483 | None:intergenic |
| AGAGATTTCCGAGGAGGTTT+CGG | 0.304061 | tig0030275:+4128 | None:intergenic |
| CAGAAGAAATCTGGGAAAAT+AGG | 0.305949 | tig0030275:-3907 | Msa1443000:CDS |
| CAAAATTTCCACCCTGCTGC+TGG | 0.306398 | tig0030275:+4691 | None:intergenic |
| GGCCTCTGCATCTGGCTTGC+CGG | 0.309737 | tig0030275:+5038 | None:intergenic |
| GAACTAGGAGGTGGATAATA+GGG | 0.311941 | tig0030275:+4456 | None:intergenic |
| CCGGTGTCAAAGCTGGCAAC+TGG | 0.312674 | tig0030275:+5057 | None:intergenic |
| TTTGAGGAGTTAGTTTGTTC+AGG | 0.322262 | tig0030275:+1982 | None:intergenic |
| AAGGATAACCAGAAGAAATC+TGG | 0.324148 | tig0030275:-3916 | Msa1443000:CDS |
| TCCATATGTTCCTTAGCTTT+GGG | 0.324917 | tig0030275:+1450 | None:intergenic |
| CAGTTTGGATCGATTGTTCC+TGG | 0.325734 | tig0030275:-5645 | Msa1443000:CDS |
| GACAGTAGTATATCTGATAC+TGG | 0.327338 | tig0030275:-3726 | Msa1443000:CDS |
| AGAATGCCTAGCGGTATTAA+TGG | 0.330627 | tig0030275:-896 | Msa1443000:three_prime_UTR |
| GAAGAGAGAGAAAGTTGAAT+AGG | 0.335077 | tig0030275:+8082 | None:intergenic |
| CTAGGTGGCTGCTGCTGCTT+CGG | 0.335312 | tig0030275:+5152 | None:intergenic |
| CAACAGAAGGCCTCTGCATC+TGG | 0.336441 | tig0030275:+5030 | None:intergenic |
| TCAATACCTGATGTGCATTC+TGG | 0.340224 | tig0030275:-935 | Msa1443000:three_prime_UTR |
| CCTTCGAATTATTATCCTTC+CGG | 0.340630 | tig0030275:-4498 | Msa1443000:CDS |
| TCTACTCAAACACGTGGATA+TGG | 0.341608 | tig0030275:-1118 | Msa1443000:CDS |
| GCTGAGAAGAAGTATGAAAT+AGG | 0.351753 | tig0030275:-2053 | Msa1443000:CDS |
| GAAGATTAAGGTTAAGGTTA+AGG | 0.352636 | tig0030275:+8142 | None:intergenic |
| GCTGAGTGTTGGGAGTTATC+TGG | 0.352770 | tig0030275:+4415 | None:intergenic |
| GATGAGCGAAACTTATGTTA+TGG | 0.357477 | tig0030275:+4778 | None:intergenic |
| TCCCCTAGCAAGACCACCTT+GGG | 0.359332 | tig0030275:+991 | None:intergenic |
| TGTACTATCATTGATTTCCT+TGG | 0.359858 | tig0030275:+2973 | None:intergenic |
| TTGACTAATTCTAGTATTTG+TGG | 0.360999 | tig0030275:-4162 | Msa1443000:CDS |
| TAACATGCGCCTTCTTGCCT+TGG | 0.361754 | tig0030275:+1638 | None:intergenic |
| CCTAACTGACCTCCTATTAG+AGG | 0.362774 | tig0030275:+7524 | None:intergenic |
| ATGATGATCGGAATCTAAAT+AGG | 0.364663 | tig0030275:-724 | Msa1443000:three_prime_UTR |
| TGTGATTTGAGGGATTATTC+AGG | 0.366576 | tig0030275:-7699 | Msa1443000:five_prime_UTR |
| GAAGAGTTGGACCTACTAAC+AGG | 0.367635 | tig0030275:+3940 | None:intergenic |
| TGAATTTGTCGGTCCTCTAC+TGG | 0.367938 | tig0030275:+964 | None:intergenic |
| CGTTGCCACCTCTCCCCGTC+AGG | 0.367976 | tig0030275:+2143 | None:intergenic |
| ATCCCCTGAGATTGAATTTG+TGG | 0.369689 | tig0030275:+4933 | None:intergenic |
| CTGGTTATCCTTTGAAGAGT+TGG | 0.369729 | tig0030275:+3927 | None:intergenic |
| TGGTAGGATGGGTCGTGGTA+TGG | 0.372273 | tig0030275:-1239 | Msa1443000:CDS |
| TGCAAGCTGATGAGTACTAT+TGG | 0.373297 | tig0030275:-1489 | Msa1443000:CDS |
| ACAGATGCAGCAGATTGTTT+TGG | 0.374699 | tig0030275:+4057 | None:intergenic |
| AACACGTGGATATGGTTTAC+AGG | 0.378611 | tig0030275:-1110 | Msa1443000:CDS |
| GTGTGTGAAGATTAAGGTTA+AGG | 0.379121 | tig0030275:+8136 | None:intergenic |
| GCCGTAATTTCAAAACCTTC+AGG | 0.379169 | tig0030275:+2485 | None:intergenic |
| TTAGGAAACATCAGATTGAT+TGG | 0.380663 | tig0030275:-1618 | Msa1443000:CDS |
| TAATCCACAAATTCAATCTC+AGG | 0.382370 | tig0030275:-4937 | Msa1443000:CDS |
| GAAGCTGATGATGTCACTTT+AGG | 0.382907 | tig0030275:+4243 | None:intergenic |
| CATAAGTTTCGCTCATCAAA+TGG | 0.382987 | tig0030275:-4772 | Msa1443000:CDS |
| TGGGATTGAGAAGGTACATT+AGG | 0.383018 | tig0030275:+4549 | None:intergenic |
| TTATCATCAACTTCAAGCTT+TGG | 0.383460 | tig0030275:+2599 | None:intergenic |
| GGGCAGCGGTGGCCGCGCAC+CGG | 0.384081 | tig0030275:-7559 | Msa1443000:CDS |
| TTCTAAATTTGGTCTATCCT+TGG | 0.385396 | tig0030275:+2907 | None:intergenic |
| TGCCCATGTTGCCCATTTGA+TGG | 0.389885 | tig0030275:+4736 | None:intergenic |
| GACCTGTCTACAGTTCTTCC+AGG | 0.390159 | tig0030275:+2401 | None:intergenic |
| AATGCAATCTGGGGCACATC+AGG | 0.390407 | tig0030275:-2186 | Msa1443000:CDS |
| ACAGATTCTGCTCAGTTAGA+TGG | 0.392624 | tig0030275:-2695 | Msa1443000:CDS |
| GATTCAGATGCCTTTGCAAC+CGG | 0.393861 | tig0030275:+5948 | None:intergenic |
| CTTCGTCACTCTCCTCTAAT+AGG | 0.395463 | tig0030275:-7536 | Msa1443000:CDS |
| GCAGCTCATAATATAAACTA+TGG | 0.395927 | tig0030275:-764 | Msa1443000:three_prime_UTR |
| AGATCTTCAGTGATAATTGC+AGG | 0.396361 | tig0030275:+3666 | None:intergenic |
| TCATCAGTTGCCCCATCAAA+TGG | 0.396909 | tig0030275:-4748 | Msa1443000:CDS |
| TCGTTGTCCACACTCAAATC+AGG | 0.397179 | tig0030275:+1804 | None:intergenic |
| TTGATTTGAGAAGGAATAGA+TGG | 0.397789 | tig0030275:-1347 | Msa1443000:CDS |
| AAAGGATCGCCCCACCATAT+TGG | 0.398443 | tig0030275:+2216 | None:intergenic |
| GGACCGGCACCCATCCAATA+TGG | 0.402778 | tig0030275:-2230 | Msa1443000:CDS |
| CCCTGCTGCTGGGGATATGG+AGG | 0.406085 | tig0030275:+4702 | None:intergenic |
| TGCACAAGGTGGGCAATATA+GGG | 0.410112 | tig0030275:-6299 | Msa1443000:CDS |
| TCACAGCCATCTTTACAGTT+TGG | 0.411169 | tig0030275:-4966 | Msa1443000:CDS |
| GAAGGAATAGATGGCAAGTA+AGG | 0.411315 | tig0030275:-1338 | Msa1443000:CDS |
| CACCTATTCACTTCAACACT+TGG | 0.411446 | tig0030275:+8211 | None:intergenic |
| GAAGCAGCAATGGATTTAAC+AGG | 0.411491 | tig0030275:+4525 | None:intergenic |
| TGCCAACTTCTGCTCACATC+TGG | 0.413815 | tig0030275:-1838 | Msa1443000:CDS |
| GCCTCAACATCTTCCTCATC+AGG | 0.417737 | tig0030275:+1516 | None:intergenic |
| AAGGCAAGAAGGCGCATGTT+AGG | 0.418141 | tig0030275:-1636 | Msa1443000:CDS |
| GACCCCAAGGTGGTCTTGCT+AGG | 0.418455 | tig0030275:-994 | Msa1443000:three_prime_UTR |
| GCTTCAGCAATGTGAGGAAT+AGG | 0.419383 | tig0030275:+4294 | None:intergenic |
| GGTAGGATGGGTCGTGGTAT+GGG | 0.421407 | tig0030275:-1238 | Msa1443000:CDS |
| AGCGCACATCGTATGGCAAT+AGG | 0.421752 | tig0030275:-856 | Msa1443000:three_prime_UTR |
| AGTGAAAGAGAAACCAGAAT+TGG | 0.424484 | tig0030275:+8032 | None:intergenic |
| CCTTGGTACCTGACACTGAA+TGG | 0.425315 | tig0030275:+2924 | None:intergenic |
| AGATGCTGTGCAAGAGAGGC+AGG | 0.425404 | tig0030275:-1275 | Msa1443000:CDS |
| ATACCCTTAGCAGGGCTTGT+AGG | 0.425992 | tig0030275:+5843 | None:intergenic |
| CCTAGCGGTATTAATGGTTA+TGG | 0.426463 | tig0030275:-890 | Msa1443000:three_prime_UTR |
| TATTCAGATGGTGGGTCATC+TGG | 0.426747 | tig0030275:-4585 | Msa1443000:CDS |
| TTGTCTCCTACTTCTCCAAT+GGG | 0.428645 | tig0030275:-1157 | Msa1443000:CDS |
| TTTCTGGGCCAATGCAATCT+GGG | 0.429683 | tig0030275:-2196 | Msa1443000:CDS |
| CAATCGATCCAAACTGAAAA+GGG | 0.431664 | tig0030275:+5652 | None:intergenic |
| CCCTCCATATCCCCAGCAGC+AGG | 0.433678 | tig0030275:-4703 | Msa1443000:CDS |
| CCTGAGGAAAAGAAAGAAAC+TGG | 0.433929 | tig0030275:-2776 | Msa1443000:CDS |
| TCATATCCAGCTGGACTTGA+AGG | 0.434008 | tig0030275:+800 | None:intergenic |
| GTGACATCATCAGCTTCAAC+GGG | 0.434347 | tig0030275:-4237 | Msa1443000:CDS |
| AGCCTTGTGCATCATCTGTA+AGG | 0.434837 | tig0030275:+2073 | None:intergenic |
| GGCAACATGGGCATTGGCAC+CGG | 0.434881 | tig0030275:-4726 | Msa1443000:CDS |
| AAACACCAAAATTGCCTCCT+TGG | 0.435651 | tig0030275:+2267 | None:intergenic |
| GTTGTCTCCTACTTCTCCAA+TGG | 0.436455 | tig0030275:-1158 | Msa1443000:CDS |
| CAGTGATAATTGCAGGAGAA+TGG | 0.436567 | tig0030275:+3673 | None:intergenic |
| CACCCCTCTCAAATTCCTCC+TGG | 0.437600 | tig0030275:+1745 | None:intergenic |
| TCATTACCCAAGGGTCTTTG+AGG | 0.437626 | tig0030275:+1031 | None:intergenic |
| GCATCATCTGTAAGGGAGAC+TGG | 0.438292 | tig0030275:+2081 | None:intergenic |
| GGTGGTCATGGAAGGGGCAG+CGG | 0.438433 | tig0030275:-7573 | Msa1443000:CDS |
| GCAAGCTGATGAGTACTATT+GGG | 0.439035 | tig0030275:-1488 | Msa1443000:CDS |
| GCTGCATCCTCCCAGTCATC+AGG | 0.439108 | tig0030275:+2635 | None:intergenic |
| TCCCAAAGCTAAGGAACATA+TGG | 0.439443 | tig0030275:-1451 | Msa1443000:CDS |
| TAATGCAAGAGATACTCATC+TGG | 0.439535 | tig0030275:-5102 | Msa1443000:CDS |
| CCTGATGTGCATTCTGGCCC+TGG | 0.441608 | tig0030275:-929 | Msa1443000:three_prime_UTR |
| TTCACAGGATAACTAAATAT+CGG | 0.442779 | tig0030275:+4390 | None:intergenic |
| GGCATTCTGTGAGAGTCTCC+AGG | 0.446032 | tig0030275:+911 | None:intergenic |
| TTGTTCCTGGTGTTATGAAT+GGG | 0.446763 | tig0030275:-5632 | Msa1443000:CDS |
| ATGGTGGGGCGATCCTTTCT+GGG | 0.446954 | tig0030275:-2211 | Msa1443000:CDS |
| GTCCCTCAGGTGGTCATGGA+AGG | 0.450408 | tig0030275:-7581 | Msa1443000:CDS |
| CAACATGAATTTATCTTCTA+GGG | 0.451244 | tig0030275:-1394 | Msa1443000:CDS |
| ATTAAGGTTAAGGTTAAGGT+TGG | 0.451688 | tig0030275:+8146 | None:intergenic |
| TGCTGCTGCTTCGGAGCAGT+AGG | 0.452690 | tig0030275:+5161 | None:intergenic |
| AGGTCAATCATCTGAAGATC+AGG | 0.453111 | tig0030275:-3887 | Msa1443000:intron |
| TGTGAAAATTTGTGATTTGA+GGG | 0.453152 | tig0030275:-7709 | Msa1443000:five_prime_UTR |
| TTGACTAACATACCCTTAGC+AGG | 0.453341 | tig0030275:+5834 | None:intergenic |
| CCCTCAGGTGGTCATGGAAG+GGG | 0.454368 | tig0030275:-7579 | Msa1443000:CDS |
| TTGTGAAAATTTGTGATTTG+AGG | 0.455563 | tig0030275:-7710 | Msa1443000:five_prime_UTR |
| CCAGTTGCCAGCTTTGACAC+CGG | 0.459416 | tig0030275:-5057 | Msa1443000:CDS |
| TTTCCGATTGGTATAGGCAT+TGG | 0.462124 | tig0030275:+4882 | None:intergenic |
| ATTGTTCCTGGTGTTATGAA+TGG | 0.462317 | tig0030275:-5633 | Msa1443000:CDS |
| CTTGTTAACGGAAGAGAACT+AGG | 0.462657 | tig0030275:+4441 | None:intergenic |
| ACAATCGATCCAAACTGAAA+AGG | 0.463634 | tig0030275:+5651 | None:intergenic |
| CGAGCAGCGTAAGTACTGTT+TGG | 0.463784 | tig0030275:+6247 | None:intergenic |
| AATATCGGTGGCTGAGTGTT+GGG | 0.464841 | tig0030275:+4405 | None:intergenic |
| TGGCTTGCCGGTGTCAAAGC+TGG | 0.465883 | tig0030275:+5050 | None:intergenic |
| TAATTAATTGGCAAGGTCCT+AGG | 0.466014 | tig0030275:+1055 | None:intergenic |
| GTTATCTGGCTACTTGTTAA+CGG | 0.466931 | tig0030275:+4429 | None:intergenic |
| TAGGGTGAGATTTATGTTGA+AGG | 0.468736 | tig0030275:-1376 | Msa1443000:CDS |
| TCAGTTGAATTCACTGGTGA+AGG | 0.469170 | tig0030275:+6271 | None:intergenic |
| GCCCCTTCCATGACCACCTG+AGG | 0.473027 | tig0030275:+7578 | None:intergenic |
| AAAATTTCCACCCTGCTGCT+GGG | 0.473719 | tig0030275:+4692 | None:intergenic |
| TTAGCTCTTCATGCGTTTCA+GGG | 0.473728 | tig0030275:+4631 | None:intergenic |
| TCAAACTGTCAAATGAAGAA+AGG | 0.475077 | tig0030275:-1674 | Msa1443000:CDS |
| ACCCCAAGGTGGTCTTGCTA+GGG | 0.476492 | tig0030275:-993 | Msa1443000:three_prime_UTR |
| TGGTTTGTTTCACTTCCTAC+AGG | 0.477508 | tig0030275:+3693 | None:intergenic |
| GGTAATGAGTCTATAACATT+GGG | 0.477756 | tig0030275:-1016 | Msa1443000:exon |
| TTTGAGGGATTATTCAGGAT+TGG | 0.477966 | tig0030275:-7694 | Msa1443000:five_prime_UTR |
| AGAGCTAAGGCTTGATAAAA+GGG | 0.478379 | tig0030275:-4616 | Msa1443000:CDS |
| GATGGCTGTGACTGCTGAAA+TGG | 0.478386 | tig0030275:+4978 | None:intergenic |
| AATTATCCTCAAAGACCCTT+GGG | 0.479411 | tig0030275:-1037 | Msa1443000:CDS |
| AAGGAATTAAACCCCTCTGC+TGG | 0.479561 | tig0030275:+2108 | None:intergenic |
| CTTGGTACCTGACACTGAAT+GGG | 0.481026 | tig0030275:+2925 | None:intergenic |
| TCGATGTCCCATTCAGTGTC+AGG | 0.482617 | tig0030275:-2932 | Msa1443000:CDS |
| CTTCTGTTGTTCCTGTACCT+GGG | 0.484056 | tig0030275:-5016 | Msa1443000:CDS |
| GGGTAATGAGTCTATAACAT+TGG | 0.485926 | tig0030275:-1017 | Msa1443000:exon |
| TTCTGCTAGCTTCCAGCAGA+GGG | 0.486828 | tig0030275:-2120 | Msa1443000:CDS |
| CCAGGGCCAGAATGCACATC+AGG | 0.486855 | tig0030275:+929 | None:intergenic |
| GCCCATGTTGCCCATTTGAT+GGG | 0.489050 | tig0030275:+4737 | None:intergenic |
| TAATTATCCTCAAAGACCCT+TGG | 0.490565 | tig0030275:-1038 | Msa1443000:CDS |
| CGTTCCTACAAGCCCTGCTA+AGG | 0.493057 | tig0030275:-5847 | Msa1443000:CDS |
| TTTGGCTCAGTTGAATTCAC+TGG | 0.496469 | tig0030275:+6265 | None:intergenic |
| CTCCAGAAAGCAGATGCTGC+CGG | 0.496977 | tig0030275:-2833 | Msa1443000:CDS |
| CGTGATTCACATCCTAGTCC+TGG | 0.497037 | tig0030275:-2419 | Msa1443000:CDS |
| GCAGGGCTTGTAGGAACGGT+TGG | 0.499289 | tig0030275:+5852 | None:intergenic |
| AATCTTCGAGAAGGCTCTGA+TGG | 0.499796 | tig0030275:-1883 | Msa1443000:CDS |
| CAGCCATCTTTACAGTTTGG+CGG | 0.499905 | tig0030275:-4963 | Msa1443000:CDS |
| GGTTGATGAGGCCGAGGGTG+AGG | 0.499924 | tig0030275:-1697 | Msa1443000:CDS |
| AGAGGTCCCTCAGGTGGTCA+TGG | 0.500312 | tig0030275:-7585 | Msa1443000:CDS |
| AGTTGATGATAAATCTCAGC+AGG | 0.502586 | tig0030275:-2588 | Msa1443000:CDS |
| CCTATACCAATCGGAAATGT+TGG | 0.502665 | tig0030275:-4876 | Msa1443000:CDS |
| CCTCATCCAATGCACTCTCA+TGG | 0.502876 | tig0030275:-4816 | Msa1443000:CDS |
| TTATCTGAGCGCACATCGTA+TGG | 0.503958 | tig0030275:-863 | Msa1443000:three_prime_UTR |
| ATCTGATGGGCCGGTTGCAA+AGG | 0.503961 | tig0030275:-5958 | Msa1443000:CDS |
| GAAATAGCCCTGACGGGGAG+AGG | 0.504610 | tig0030275:-2151 | Msa1443000:CDS |
| AGATGAGCAGAAGCGTGATC+AGG | 0.505549 | tig0030275:-5475 | Msa1443000:intron |
| AGGATGTAATTGATTTGAGA+AGG | 0.507541 | tig0030275:-1356 | Msa1443000:CDS |
| GGTCATGGAAGGGGCAGCGG+TGG | 0.507615 | tig0030275:-7570 | Msa1443000:CDS |
| GTTACAACTGCATCATTCCT+AGG | 0.508047 | tig0030275:+5134 | None:intergenic |
| GGAGCTGAGCTTGTACGAGC+AGG | 0.508215 | tig0030275:+5507 | None:intergenic |
| AATTCTGGGCGTGGTTTGGA+TGG | 0.508941 | tig0030275:-2311 | Msa1443000:CDS |
| CCCCTTCCATGACCACCTGA+GGG | 0.509286 | tig0030275:+7579 | None:intergenic |
| GTTATTATTAAACAAATGCC+AGG | 0.509500 | tig0030275:-1763 | Msa1443000:CDS |
| TCCCTCAGGTGGTCATGGAA+GGG | 0.509961 | tig0030275:-7580 | Msa1443000:CDS |
| GAAGTTACTAGGTCAGTGTC+AGG | 0.511002 | tig0030275:-1541 | Msa1443000:CDS |
| ATTGACGTATTTGAATTTGT+CGG | 0.511853 | tig0030275:+953 | None:intergenic |
| TTAAGGTTGGTCAAGGTGGT+AGG | 0.511974 | tig0030275:+8159 | None:intergenic |
| GGCATTGAAAGCCCAGGTAC+AGG | 0.512282 | tig0030275:+5005 | None:intergenic |
| GACAGACCTTCAAGTCCAGC+TGG | 0.512927 | tig0030275:-806 | Msa1443000:three_prime_UTR |
| CGTGGTTTGGATGGTAGTGG+TGG | 0.513269 | tig0030275:-2302 | Msa1443000:CDS |
| GATCGCCCCACCATATTGGA+TGG | 0.513286 | tig0030275:+2220 | None:intergenic |
| CATCATCTGTAAGGGAGACT+GGG | 0.513370 | tig0030275:+2082 | None:intergenic |
| GCGCACATCGTATGGCAATA+GGG | 0.514554 | tig0030275:-855 | Msa1443000:three_prime_UTR |
| CGGTGTCAAAGCTGGCAACT+GGG | 0.514945 | tig0030275:+5058 | None:intergenic |
| TCCAGAAAGCAGATGCTGCC+GGG | 0.516890 | tig0030275:-2832 | Msa1443000:CDS |
| TTTAAGGAATCCTCGTGGAC+CGG | 0.519228 | tig0030275:-2246 | Msa1443000:CDS |
| TATGTTCCTTAGCTTTGGGA+TGG | 0.519532 | tig0030275:+1454 | None:intergenic |
| CAAGTAAGGAGAAAAGTTGA+TGG | 0.520203 | tig0030275:-1324 | Msa1443000:CDS |
| CCACCATATTGGATGGGTGC+CGG | 0.520545 | tig0030275:+2227 | None:intergenic |
| ATCCTCCCAGTCATCAGGTT+CGG | 0.520734 | tig0030275:+2640 | None:intergenic |
| AAATATCGGTGGCTGAGTGT+TGG | 0.520788 | tig0030275:+4404 | None:intergenic |
| CGGTTGGTTCAGAGCTCACA+GGG | 0.521204 | tig0030275:+5868 | None:intergenic |
| GCCCCATCAAATGGGCAACA+TGG | 0.521499 | tig0030275:-4739 | Msa1443000:CDS |
| CAAACTGTCAAATGAAGAAA+GGG | 0.522430 | tig0030275:-1673 | Msa1443000:CDS |
| CATCAGTTGCCCCATCAAAT+GGG | 0.522550 | tig0030275:-4747 | Msa1443000:CDS |
| ACCAGAATTGGAAGAGATTG+TGG | 0.524634 | tig0030275:+8044 | None:intergenic |
| CATCTACAGATGAACGACTA+CGG | 0.525388 | tig0030275:-646 | Msa1443000:three_prime_UTR |
| GGTAGGATAGGAGCATCTGA+TGG | 0.525548 | tig0030275:-5972 | Msa1443000:intron |
| AGCAATGGATTTAACAGGAT+GGG | 0.526055 | tig0030275:+4530 | None:intergenic |
| TCTACAGTTCTTCCAGGACT+AGG | 0.526677 | tig0030275:+2407 | None:intergenic |
| AGGATAACCAGAAGAAATCT+GGG | 0.526724 | tig0030275:-3915 | Msa1443000:CDS |
| ACGCCCAGAATTAAAAGCAT+TGG | 0.527461 | tig0030275:+2322 | None:intergenic |
| TGCTTCGGAGCAGTAGGGAT+TGG | 0.527476 | tig0030275:+5167 | None:intergenic |
| TGACAGTTTGACCTCACCCT+CGG | 0.527902 | tig0030275:+1686 | None:intergenic |
| TTCTGTGCAATCTCCTACAG+TGG | 0.530059 | tig0030275:-3772 | Msa1443000:CDS |
| GAAAGTGAATCTACATCTGA+AGG | 0.530671 | tig0030275:-2734 | Msa1443000:CDS |
| GAAGATCTTCTCACATCTGA+AGG | 0.531114 | tig0030275:-3651 | Msa1443000:CDS |
| ACGGTTGGTTCAGAGCTCAC+AGG | 0.532153 | tig0030275:+5867 | None:intergenic |
| TGCAAAGAAATAGCCCTGAC+GGG | 0.532173 | tig0030275:-2157 | Msa1443000:CDS |
| CTGCTGGGGATATGGAGGGC+CGG | 0.533166 | tig0030275:+4707 | None:intergenic |
| CAGCAATCAGAGAGTACTAC+AGG | 0.533715 | tig0030275:-610 | None:intergenic |
| ATAAGTTTCGCTCATCAAAT+GGG | 0.533746 | tig0030275:-4771 | Msa1443000:CDS |
| AAATAAGGTTGATGAGGCCG+AGG | 0.534130 | tig0030275:-1703 | Msa1443000:CDS |
| ATGCCAATGCCTATACCAAT+CGG | 0.534416 | tig0030275:-4885 | Msa1443000:CDS |
| CAAATGGGCAACATGGGCAT+TGG | 0.534467 | tig0030275:-4732 | Msa1443000:CDS |
| CTCATCCAATGCACTCTCAT+GGG | 0.534843 | tig0030275:-4815 | Msa1443000:CDS |
| AGAGAAGAACCAAGGCAAGA+AGG | 0.535181 | tig0030275:-1647 | Msa1443000:CDS |
| GCTTTGATGAATTCCAATGT+TGG | 0.536108 | tig0030275:-2449 | Msa1443000:CDS |
| CTTAGCAGGGCTTGTAGGAA+CGG | 0.536177 | tig0030275:+5848 | None:intergenic |
| GCGTGAGGTGATGTTGCAAC+AGG | 0.536639 | tig0030275:+701 | None:intergenic |
| TGTGACTGCTGAAATGGTGT+TGG | 0.537258 | tig0030275:+4984 | None:intergenic |
| ACAGAGATGCTGTGCAAGAG+AGG | 0.539256 | tig0030275:-1279 | Msa1443000:CDS |
| GCGAAACTTATGTTATGGCT+TGG | 0.540498 | tig0030275:+4783 | None:intergenic |
| TCCTCTAGGACCAAAATCCA+TGG | 0.541530 | tig0030275:+1189 | None:intergenic |
| GGAGTGCTGACTTTAGTAAC+GGG | 0.541592 | tig0030275:+4315 | None:intergenic |
| CGAAGCAGCAGCAGCCACCT+AGG | 0.541855 | tig0030275:-5151 | Msa1443000:CDS |
| CCCCATCAAATGGGCAACAT+GGG | 0.542174 | tig0030275:-4738 | Msa1443000:CDS |
| TGTAAGGGAGACTGGGGAGA+AGG | 0.542942 | tig0030275:+2089 | None:intergenic |
| TCAAGCACAAGTTGGTAGGA+TGG | 0.543349 | tig0030275:-1251 | Msa1443000:CDS |
| AGCCAGATGTGAGCAGAAGT+TGG | 0.545065 | tig0030275:+1836 | None:intergenic |
| ACACGAGGGAACCTGTTAGT+AGG | 0.546281 | tig0030275:-3951 | Msa1443000:CDS |
| CAGATTGCATTGGCCCAGAA+AGG | 0.548035 | tig0030275:+2198 | None:intergenic |
| TGATGTGCCCCAGATTGCAT+TGG | 0.548239 | tig0030275:+2188 | None:intergenic |
| GCTGCTGCTTCGGAGCAGTA+GGG | 0.548616 | tig0030275:+5162 | None:intergenic |
| AGGGATTGGCACTGAAGGCA+CGG | 0.549263 | tig0030275:+5181 | None:intergenic |
| ACAGTAGTATATCTGATACT+GGG | 0.549589 | tig0030275:-3725 | Msa1443000:CDS |
| AATCCACAAATTCAATCTCA+GGG | 0.549750 | tig0030275:-4936 | Msa1443000:CDS |
| CACCTCACGCTCAGCCGCAA+GGG | 0.551606 | tig0030275:-688 | Msa1443000:three_prime_UTR |
| TAAAGTGTCAGATGCAGAAG+AGG | 0.552033 | tig0030275:-2030 | Msa1443000:CDS |
| AATCAGCAGAGAGGTCCCTC+AGG | 0.552288 | tig0030275:-7594 | Msa1443000:CDS |
| ATCACGAGAATTACCAACAT+TGG | 0.554227 | tig0030275:+2436 | None:intergenic |
| AGTGACATCATCAGCTTCAA+CGG | 0.554444 | tig0030275:-4238 | Msa1443000:CDS |
| ATAAAGCCGAACCTGATGAC+TGG | 0.554900 | tig0030275:-2646 | Msa1443000:CDS |
| CACCGGCAAGCCAGATGCAG+AGG | 0.555749 | tig0030275:-5040 | Msa1443000:CDS |
| ATCTACAGATGAACGACTAC+GGG | 0.556428 | tig0030275:-645 | Msa1443000:three_prime_UTR |
| CGGCACCCATCCAATATGGT+GGG | 0.556948 | tig0030275:-2226 | Msa1443000:CDS |
| CTCCAATGGGTGGACCGCGT+GGG | 0.557376 | tig0030275:-1144 | Msa1443000:CDS |
| GTTAAGGTTAAGGTTGGTCA+AGG | 0.557675 | tig0030275:+8152 | None:intergenic |
| GATAGGAGCATCTGATGGGC+CGG | 0.558546 | tig0030275:-5967 | Msa1443000:intron |
| TCTCCAATGGGTGGACCGCG+TGG | 0.559377 | tig0030275:-1145 | Msa1443000:CDS |
| GGTCCACCCATTGGAGAAGT+AGG | 0.559708 | tig0030275:+1151 | None:intergenic |
| AACTGTAGACAGGTCAAGGA+TGG | 0.560374 | tig0030275:-2393 | Msa1443000:CDS |
| CCGGCACCCATCCAATATGG+TGG | 0.560436 | tig0030275:-2227 | Msa1443000:CDS |
| TCACCTCACGCTCAGCCGCA+AGG | 0.561023 | tig0030275:-689 | Msa1443000:three_prime_UTR |
| TTCTGGGCCAATGCAATCTG+GGG | 0.561037 | tig0030275:-2195 | Msa1443000:CDS |
| CGAAGGCTGAGAAGCAGCAA+TGG | 0.561312 | tig0030275:+4515 | None:intergenic |
| GTACTCTCTGATTGCTGACA+AGG | 0.561403 | tig0030275:+616 | None:intergenic |
| AGGCTTGATAAAAGGGCAGA+TGG | 0.561761 | tig0030275:-4609 | Msa1443000:CDS |
| GGACCGCCAAACTGTAAAGA+TGG | 0.561853 | tig0030275:+4960 | None:intergenic |
| ACCTACATCAGCTGTGACTG+TGG | 0.562987 | tig0030275:-4007 | Msa1443000:CDS |
| ATGGTGGGTCATCTGGTGCT+AGG | 0.563334 | tig0030275:-4578 | Msa1443000:CDS |
| GGGATTGGCACTGAAGGCAC+GGG | 0.563348 | tig0030275:+5182 | None:intergenic |
| CTTGAATGATCATATCCAGC+TGG | 0.564532 | tig0030275:+791 | None:intergenic |
| GTCCTGGAAGAACTGTAGAC+AGG | 0.564617 | tig0030275:-2403 | Msa1443000:CDS |
| CCTCTAGGACCAAAATCCAT+GGG | 0.564899 | tig0030275:+1190 | None:intergenic |
| CCTGCTGCTGGGGATATGGA+GGG | 0.566335 | tig0030275:+4703 | None:intergenic |
| TGAAGGATCTATTGCTGAAG+TGG | 0.566636 | tig0030275:-3634 | Msa1443000:CDS |
| TTGAGGATAATTAATTGGCA+AGG | 0.566706 | tig0030275:+1048 | None:intergenic |
| TTCCCCTAGCAAGACCACCT+TGG | 0.566765 | tig0030275:+990 | None:intergenic |
| CAAGCACAAGTTGGTAGGAT+GGG | 0.567300 | tig0030275:-1250 | Msa1443000:CDS |
| ACTATGGTAACAGAGACTTA+AGG | 0.567699 | tig0030275:-748 | Msa1443000:three_prime_UTR |
| TTGTGGCTGAGGAAGACAAA+TGG | 0.570088 | tig0030275:-2355 | Msa1443000:CDS |
| GACAACGCAATCACTCTCAC+TGG | 0.570146 | tig0030275:-1918 | Msa1443000:CDS |
| AGAAGAAAATGTTGACAGAG+AGG | 0.570187 | tig0030275:-1584 | Msa1443000:CDS |
| CAATGCATTACTCTTCCTGA+AGG | 0.571061 | tig0030275:-2500 | Msa1443000:CDS |
| AAAGGCAATCTTATGAGCCT+AGG | 0.571641 | tig0030275:-1072 | Msa1443000:CDS |
| GAAGAACTGTAGACAGGTCA+AGG | 0.571641 | tig0030275:-2397 | Msa1443000:CDS |
| GGCCCTTGCGGCTGAGCGTG+AGG | 0.571726 | tig0030275:+686 | None:intergenic |
| CAGTTGAATTCACTGGTGAA+GGG | 0.571781 | tig0030275:+6272 | None:intergenic |
| GCATACATTTCACAGAAGGT+AGG | 0.574748 | tig0030275:+1858 | None:intergenic |
| CAAACAGTACTTACGCTGCT+CGG | 0.575193 | tig0030275:-6246 | Msa1443000:CDS |
| AGGTGGATAATAGGGAGGAC+TGG | 0.575283 | tig0030275:+4464 | None:intergenic |
| TTCTGCTCATCTAAATTAGG+AGG | 0.575785 | tig0030275:+5486 | None:intergenic |
| TCCTGATGAGGAAGATGTTG+AGG | 0.576359 | tig0030275:-1517 | Msa1443000:CDS |
| TGAGAGACAATTGGCCCTTG+CGG | 0.576384 | tig0030275:+674 | None:intergenic |
| TGTTGGACAAGTGCAACAGC+CGG | 0.576827 | tig0030275:-4859 | Msa1443000:CDS |
| ATTGGATGAGGCTGAAGACC+TGG | 0.577000 | tig0030275:+4828 | None:intergenic |
| GAAACAATCAATCTGCAAGA+AGG | 0.578155 | tig0030275:-1216 | Msa1443000:CDS |
| GTTGGCATACATTTCACAGA+AGG | 0.578221 | tig0030275:+1854 | None:intergenic |
| AATGCAAGAGATACTCATCT+GGG | 0.579432 | tig0030275:-5101 | Msa1443000:CDS |
| CCATGAGAGTGCATTGGATG+AGG | 0.579533 | tig0030275:+4816 | None:intergenic |
| GGGTGAAAGAGAACAAGAAG+AGG | 0.579865 | tig0030275:-1727 | Msa1443000:CDS |
| TTTAGTTATCCTGTGAACAA+TGG | 0.580559 | tig0030275:-4384 | Msa1443000:CDS |
| AGGCAGGCTCAAGCACAAGT+TGG | 0.580612 | tig0030275:-1259 | Msa1443000:CDS |
| ACTTGTCCAACATTTCCGAT+TGG | 0.581212 | tig0030275:+4870 | None:intergenic |
| ATGCAAAGAAATAGCCCTGA+CGG | 0.581347 | tig0030275:-2158 | Msa1443000:CDS |
| CAGTAGTATATCTGATACTG+GGG | 0.581649 | tig0030275:-3724 | Msa1443000:CDS |
| AGGACTGGAACTATATGAGC+CGG | 0.582821 | tig0030275:+4479 | None:intergenic |
| GGGCGTGGTTTGGATGGTAG+TGG | 0.583255 | tig0030275:-2305 | Msa1443000:CDS |
| AAATTTCCACCCTGCTGCTG+GGG | 0.583323 | tig0030275:+4693 | None:intergenic |
| TGTTTCACTTCCTACAGGTG+TGG | 0.584021 | tig0030275:+3698 | None:intergenic |
| ATATGGATGTATATTTCGAA+AGG | 0.584216 | tig0030275:-1434 | Msa1443000:CDS |
| TTCCAAGTGTTGAAGTGAAT+AGG | 0.585646 | tig0030275:-8213 | Msa1443000:five_prime_UTR |
| CTGAAACGCATGAAGAGCTA+AGG | 0.586019 | tig0030275:-4629 | Msa1443000:CDS |
| GGTGGATTTCGACATGGCCA+AGG | 0.586237 | tig0030275:-2284 | Msa1443000:CDS |
| CCATTCAGTGTCAGGTACCA+AGG | 0.586636 | tig0030275:-2924 | Msa1443000:CDS |
| AACGGAAGAGAACTAGGAGG+TGG | 0.586669 | tig0030275:+4447 | None:intergenic |
| AAGGTTAAGGTTGGTCAAGG+TGG | 0.589397 | tig0030275:+8155 | None:intergenic |
| TAGTAGGTCCAACTCTTCAA+AGG | 0.589991 | tig0030275:-3935 | Msa1443000:CDS |
| AGGAGTGCTGACTTTAGTAA+CGG | 0.592122 | tig0030275:+4314 | None:intergenic |
| CATTGGCATAGGAATATGCA+TGG | 0.592369 | tig0030275:+4899 | None:intergenic |
| TCACGAGAACGTTCTGCAGT+GGG | 0.592815 | tig0030275:+4270 | None:intergenic |
| CATGTACAACCGCAGATGCA+TGG | 0.592993 | tig0030275:-6205 | Msa1443000:intron |
| AGGCTCAAGCACAAGTTGGT+AGG | 0.593468 | tig0030275:-1255 | Msa1443000:CDS |
| CAGCAATGGATTTAACAGGA+TGG | 0.593503 | tig0030275:+4529 | None:intergenic |
| GAGACTTAAGGAATGATGAT+CGG | 0.593938 | tig0030275:-736 | Msa1443000:three_prime_UTR |
| ATAAAGATCAGAAGTTGTCC+CGG | 0.593989 | tig0030275:+2814 | None:intergenic |
| CGTCACTCTCCTCTAATAGG+AGG | 0.594141 | tig0030275:-7533 | Msa1443000:intron |
| ATCTAACTGAGCAGAATCTG+TGG | 0.594455 | tig0030275:+2697 | None:intergenic |
| ACTAACAGGTTCCCTCGTGT+TGG | 0.594526 | tig0030275:+3954 | None:intergenic |
| ATAGCCCTGACGGGGAGAGG+TGG | 0.594575 | tig0030275:-2148 | Msa1443000:CDS |
| GCAGATGGATATTCAGATGG+TGG | 0.594673 | tig0030275:-4594 | Msa1443000:CDS |
| GCAGTAGGGATTGGCACTGA+AGG | 0.594805 | tig0030275:+5176 | None:intergenic |
| AATTACGGCAGACATAGCTC+AGG | 0.595778 | tig0030275:-2471 | Msa1443000:CDS |
| GCTGCTCGGACCATGCATAA+CGG | 0.598341 | tig0030275:-6232 | Msa1443000:CDS |
| ATGCCAGGAGGAATTTGAGA+GGG | 0.598754 | tig0030275:-1748 | Msa1443000:CDS |
| TGTTATAGACTCATTACCCA+AGG | 0.601108 | tig0030275:+1021 | None:intergenic |
| CCGTGGGAATGTTGTGGCTG+AGG | 0.601152 | tig0030275:-2366 | Msa1443000:CDS |
| ATTGGTATAGGCATTGGCAT+AGG | 0.602652 | tig0030275:+4888 | None:intergenic |
| TCAAAATCCCGAAACCTCCT+CGG | 0.602912 | tig0030275:-4136 | Msa1443000:CDS |
| ACAGCATTCTAAATCTTCTG+AGG | 0.602969 | tig0030275:-4103 | Msa1443000:CDS |
| TCTCCTACTTCTCCAATGGG+TGG | 0.603108 | tig0030275:-1154 | Msa1443000:CDS |
| TCTATAACATTGGGACCCCA+AGG | 0.604923 | tig0030275:-1007 | Msa1443000:exon |
| GATTGACCATCCCAAAGCTA+AGG | 0.604981 | tig0030275:-1460 | Msa1443000:CDS |
| GGTGTCAAAGCTGGCAACTG+GGG | 0.605147 | tig0030275:+5059 | None:intergenic |
| AGTCTAATAATGCACAAGGT+GGG | 0.605222 | tig0030275:-6309 | Msa1443000:CDS |
| ATCGCCCCACCATATTGGAT+GGG | 0.605579 | tig0030275:+2221 | None:intergenic |
| TAAAGCCGAACCTGATGACT+GGG | 0.605622 | tig0030275:-2645 | Msa1443000:CDS |
| CAAGTTGGTAGGATGGGTCG+TGG | 0.606981 | tig0030275:-1244 | Msa1443000:CDS |
| TGACTAACATACCCTTAGCA+GGG | 0.607562 | tig0030275:+5835 | None:intergenic |
| GCCTTGTGCATCATCTGTAA+GGG | 0.609387 | tig0030275:+2074 | None:intergenic |
| CTGTGTAGAGATTTCCGAGG+AGG | 0.609780 | tig0030275:+4122 | None:intergenic |
| CAGATGGATATTCAGATGGT+GGG | 0.609855 | tig0030275:-4593 | Msa1443000:CDS |
| TTCACGAGAACGTTCTGCAG+TGG | 0.610096 | tig0030275:+4269 | None:intergenic |
| CCTCCATATCCCCAGCAGCA+GGG | 0.610567 | tig0030275:-4702 | Msa1443000:CDS |
| GGTGTTGGCATTGAAAGCCC+AGG | 0.611152 | tig0030275:+4999 | None:intergenic |
| CCAGGTACAGGAACAACAGA+AGG | 0.613768 | tig0030275:+5017 | None:intergenic |
| CCCCAAGGTGGTCTTGCTAG+GGG | 0.614624 | tig0030275:-992 | Msa1443000:three_prime_UTR |
| GCCACCCCATTCATAACACC+AGG | 0.616026 | tig0030275:+5627 | None:intergenic |
| AGGGCAGATGGATATTCAGA+TGG | 0.617264 | tig0030275:-4597 | Msa1443000:CDS |
| GTAGGATAGGAGCATCTGAT+GGG | 0.618087 | tig0030275:-5971 | Msa1443000:intron |
| GGCACCCATCCAATATGGTG+GGG | 0.618695 | tig0030275:-2225 | Msa1443000:CDS |
| TTAACAGGATGGGATTGAGA+AGG | 0.619016 | tig0030275:+4540 | None:intergenic |
| CATCTCACAAATCTTCGAGA+AGG | 0.619530 | tig0030275:-1892 | Msa1443000:CDS |
| ATGCAATCTGGGGCACATCA+GGG | 0.620155 | tig0030275:-2185 | Msa1443000:CDS |
| TACATGAGTACCGTTATGCA+TGG | 0.620267 | tig0030275:+6222 | None:intergenic |
| GCATTCTGTGAGAGTCTCCA+GGG | 0.620386 | tig0030275:+912 | None:intergenic |
| GAGTGTATAAAGAAGTTACT+AGG | 0.621779 | tig0030275:-1552 | Msa1443000:CDS |
| GACATCATCAGCTTCAACGG+GGG | 0.621980 | tig0030275:-4235 | Msa1443000:CDS |
| ACTGGGGTTTCCACACCTGT+AGG | 0.622024 | tig0030275:-3708 | Msa1443000:CDS |
| CTAATAATGAAGCCAACACG+AGG | 0.625659 | tig0030275:-3966 | Msa1443000:CDS |
| GTTCTGCTAGCTTCCAGCAG+AGG | 0.627194 | tig0030275:-2121 | Msa1443000:CDS |
| TTAGAGGAGAGTGACGAAGC+CGG | 0.627489 | tig0030275:+7540 | None:intergenic |
| AAGGGAGCAGAGAAGAACCA+AGG | 0.628760 | tig0030275:-1655 | Msa1443000:CDS |
| CCGGAAGGATAATAATTCGA+AGG | 0.630610 | tig0030275:+4498 | None:intergenic |
| TCCACAGTCACAGCTGATGT+AGG | 0.630655 | tig0030275:+4006 | None:intergenic |
| AGAGTGACGAAGCCGGTGCG+CGG | 0.631295 | tig0030275:+7547 | None:intergenic |
| GTTCCTACAAGCCCTGCTAA+GGG | 0.635120 | tig0030275:-5846 | Msa1443000:intron |
| CCATAACCATTAATACCGCT+AGG | 0.637719 | tig0030275:+890 | None:intergenic |
| CCCATGTTGCCCATTTGATG+GGG | 0.640875 | tig0030275:+4738 | None:intergenic |
| GTTGGTTCAGAGCTCACAGG+GGG | 0.641318 | tig0030275:+5870 | None:intergenic |
| ATCTGCAAGAAGGAACCCCA+TGG | 0.642895 | tig0030275:-1206 | Msa1443000:CDS |
| GAAAGTGAGACAGACAAGAG+AGG | 0.642911 | tig0030275:+8108 | None:intergenic |
| ATCATCCCATGAGAGTGCAT+TGG | 0.643200 | tig0030275:+4810 | None:intergenic |
| GCTAGGGGAATGTCCAGTAG+AGG | 0.643958 | tig0030275:-977 | Msa1443000:three_prime_UTR |
| TCCTGGTGTTATGAATGGGG+TGG | 0.644250 | tig0030275:-5628 | Msa1443000:CDS |
| AGAGGCAAATAAGGTTGATG+AGG | 0.644395 | tig0030275:-1709 | Msa1443000:CDS |
| CAGCAGAGAGGTCCCTCAGG+TGG | 0.646154 | tig0030275:-7591 | Msa1443000:CDS |
| GGAACACCGTGGGAATGTTG+TGG | 0.646368 | tig0030275:-2372 | Msa1443000:CDS |
| TGAGTTACCTGATTTGAGTG+TGG | 0.651899 | tig0030275:-1811 | Msa1443000:CDS |
| AATGCCAGGAGGAATTTGAG+AGG | 0.653051 | tig0030275:-1749 | Msa1443000:CDS |
| AAGTCTAATAATGCACAAGG+TGG | 0.655622 | tig0030275:-6310 | Msa1443000:CDS |
| TGTTCCTGGTGTTATGAATG+GGG | 0.655675 | tig0030275:-5631 | Msa1443000:CDS |
| ATGCAGAAGAGGCAAAGCAG+AGG | 0.657893 | tig0030275:-2019 | Msa1443000:CDS |
| AAGATAGACGAATCATCCGA+AGG | 0.658876 | tig0030275:-3582 | Msa1443000:intron |
| GGTGCAGTAAGCGAGAAAAG+TGG | 0.660107 | tig0030275:-2674 | Msa1443000:CDS |
| GGATTTCGACATGGCCAAGG+AGG | 0.662285 | tig0030275:-2281 | Msa1443000:CDS |
| GGTCAAGGATGGAACACCGT+GGG | 0.662618 | tig0030275:-2382 | Msa1443000:CDS |
| ATGCAAGAGATACTCATCTG+GGG | 0.663739 | tig0030275:-5100 | Msa1443000:CDS |
| TGCAAGAGATACTCATCTGG+GGG | 0.664072 | tig0030275:-5099 | Msa1443000:CDS |
| TCAGTGTCAGGATCCTGATG+AGG | 0.670181 | tig0030275:-1529 | Msa1443000:CDS |
| GCAAAGAAATAGCCCTGACG+GGG | 0.670336 | tig0030275:-2156 | Msa1443000:CDS |
| GACTGCATACTAGCCACTGT+AGG | 0.671150 | tig0030275:+3759 | None:intergenic |
| TAATGCATATAAAGGACCTG+AGG | 0.671929 | tig0030275:-2792 | Msa1443000:CDS |
| TAAAGCTTACCATGCATCTG+CGG | 0.672233 | tig0030275:+6196 | None:intergenic |
| TGCCAGGAGGAATTTGAGAG+GGG | 0.673299 | tig0030275:-1747 | Msa1443000:CDS |
| TGGATGGGTGCCGGTCCACG+AGG | 0.674239 | tig0030275:+2236 | None:intergenic |
| CCTCAGCCACAACATTCCCA+CGG | 0.674666 | tig0030275:+2366 | None:intergenic |
| AAGAAGTCTAATAATGCACA+AGG | 0.677099 | tig0030275:-6313 | Msa1443000:CDS |
| GTGGGAGCTTCAGCAATGTG+AGG | 0.678263 | tig0030275:+4288 | None:intergenic |
| GTTATAGACTCATTACCCAA+GGG | 0.679443 | tig0030275:+1022 | None:intergenic |
| GGAGAAGTAGGAGACAACAT+AGG | 0.679603 | tig0030275:+1163 | None:intergenic |
| AGAATTGGAAGAGATTGTGG+AGG | 0.679675 | tig0030275:+8047 | None:intergenic |
| ATCATCTGTAAGGGAGACTG+GGG | 0.679702 | tig0030275:+2083 | None:intergenic |
| TCTGTGACCATTAAACCAAG+TGG | 0.680043 | tig0030275:-4210 | Msa1443000:CDS |
| GTAACAGCAGAAACACCACT+TGG | 0.680167 | tig0030275:+4195 | None:intergenic |
| GGTAGTGGTGGATTTCGACA+TGG | 0.680475 | tig0030275:-2290 | Msa1443000:CDS |
| ACAGGATAACTAAATATCGG+TGG | 0.680582 | tig0030275:+4393 | None:intergenic |
| TCTGCTAGCTTCCAGCAGAG+GGG | 0.681272 | tig0030275:-2119 | Msa1443000:CDS |
| CAAGCTGATGAGTACTATTG+GGG | 0.684037 | tig0030275:-1487 | Msa1443000:CDS |
| ATTATTAAACAAATGCCAGG+AGG | 0.684132 | tig0030275:-1760 | Msa1443000:CDS |
| TGTCTCAGGAGATACATCAA+AGG | 0.684325 | tig0030275:-5679 | Msa1443000:intron |
| CCATATCCCCAGCAGCAGGG+TGG | 0.685505 | tig0030275:-4699 | Msa1443000:CDS |
| GACAACATAGGTGATCCTCT+AGG | 0.687510 | tig0030275:+1175 | None:intergenic |
| ATTGGCATAGGAATATGCAT+GGG | 0.687946 | tig0030275:+4900 | None:intergenic |
| CTGGAACTATATGAGCCGGA+AGG | 0.689773 | tig0030275:+4483 | None:intergenic |
| AGCCGAACCTGATGACTGGG+AGG | 0.690100 | tig0030275:-2642 | Msa1443000:CDS |
| CTAGGAGGTGGATAATAGGG+AGG | 0.691824 | tig0030275:+4459 | None:intergenic |
| AATAAGGTTGATGAGGCCGA+GGG | 0.692298 | tig0030275:-1702 | Msa1443000:CDS |
| TCCCTTACAGATGATGCACA+AGG | 0.695376 | tig0030275:-2075 | Msa1443000:CDS |
| CAATCTGGGGCACATCAGGG+TGG | 0.695868 | tig0030275:-2182 | Msa1443000:CDS |
| ATCCACAAATTCAATCTCAG+GGG | 0.697078 | tig0030275:-4935 | Msa1443000:CDS |
| ACAACTGCATCATTCCTAGG+TGG | 0.705940 | tig0030275:+5137 | None:intergenic |
| GGGCTGTCTACTCAAACACG+TGG | 0.706624 | tig0030275:-1124 | Msa1443000:CDS |
| GACTCTCACAGAATGCCTAG+CGG | 0.707027 | tig0030275:-905 | Msa1443000:three_prime_UTR |
| TGACATCATCAGCTTCAACG+GGG | 0.707705 | tig0030275:-4236 | Msa1443000:CDS |
| CACATCGTATGGCAATAGGG+AGG | 0.708553 | tig0030275:-852 | Msa1443000:three_prime_UTR |
| TAATAATGAAGCCAACACGA+GGG | 0.712795 | tig0030275:-3965 | Msa1443000:CDS |
| CTGAATCAACAGCTGCACAG+AGG | 0.714898 | tig0030275:-5932 | Msa1443000:CDS |
| CTCTAGGACCAAAATCCATG+GGG | 0.717738 | tig0030275:+1191 | None:intergenic |
| TCTAGCTTTAATCAGCAGAG+AGG | 0.720781 | tig0030275:-7603 | Msa1443000:CDS |
| TGATTTACCAGAAACAACCA+AGG | 0.732627 | tig0030275:-2990 | Msa1443000:CDS |
| ATAACATTGGGACCCCAAGG+TGG | 0.734587 | tig0030275:-1004 | Msa1443000:exon |
| CCCCTAGCAAGACCACCTTG+GGG | 0.738262 | tig0030275:+992 | None:intergenic |
| ATGCTGTGTAGAGATTTCCG+AGG | 0.748315 | tig0030275:+4119 | None:intergenic |
| AGGTCAAGGATGGAACACCG+TGG | 0.771324 | tig0030275:-2383 | Msa1443000:CDS |
| GTTAACGGAAGAGAACTAGG+AGG | 0.786496 | tig0030275:+4444 | None:intergenic |
| GGTTGGTTCAGAGCTCACAG+GGG | 0.793640 | tig0030275:+5869 | None:intergenic |
| GTTTGAGTAGACAGCCCACG+CGG | 0.802247 | tig0030275:+1130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAATAATCAATAAAAT+AGG | + | tig0030275:2489-2508 | None:intergenic | 10.0% |
| !!! | TTATTTTTAACACAATATTT+TGG | - | tig0030275:4989-5008 | Msa1443000:CDS | 10.0% |
| !!! | ATAATTGTGTATGATTTTAA+CGG | - | tig0030275:1023-1042 | Msa1443000:CDS | 15.0% |
| !! | TTCAATTAAAACACATATAA+TGG | + | tig0030275:1356-1375 | None:intergenic | 15.0% |
| !!! | TTTTAAGACAAAGTTTATAT+TGG | + | tig0030275:2183-2202 | None:intergenic | 15.0% |
| !!! | TTTGTGAAAATTTACTATTT+TGG | - | tig0030275:2336-2355 | Msa1443000:CDS | 15.0% |
| !!! | CATGAGTTTTTATTTAATTT+TGG | - | tig0030275:2669-2688 | Msa1443000:CDS | 15.0% |
| !!! | TTTTTAGAAAAACTAAGATA+CGG | - | tig0030275:5475-5494 | Msa1443000:intron | 15.0% |
| !!! | ATTTTAGAAAAACTAAGATA+CGG | - | tig0030275:5587-5606 | Msa1443000:intron | 15.0% |
| !! | TACCTTAAAAGTTGAAATTA+GGG | + | tig0030275:924-943 | None:intergenic | 20.0% |
| !!! | TATGATTTTAACGGTTTTAA+TGG | - | tig0030275:1032-1051 | Msa1443000:CDS | 20.0% |
| !!! | TTTTGATGAATTGTGAATAA+TGG | - | tig0030275:1405-1424 | Msa1443000:CDS | 20.0% |
| !! | TTTGATGAATTGTGAATAAT+GGG | - | tig0030275:1406-1425 | Msa1443000:CDS | 20.0% |
| !!! | AATTTGTGTGTATTTTATAC+AGG | - | tig0030275:1494-1513 | Msa1443000:CDS | 20.0% |
| !!! | ATTTGTGTGTATTTTATACA+GGG | - | tig0030275:1495-1514 | Msa1443000:CDS | 20.0% |
| !!! | AAATCACTTTTGTGTATATT+TGG | - | tig0030275:1523-1542 | Msa1443000:CDS | 20.0% |
| !!! | AAAATTGATTTTGAGTGAAT+TGG | - | tig0030275:1559-1578 | Msa1443000:CDS | 20.0% |
| !!! | AATTTGTGTGTATTTTACAT+AGG | - | tig0030275:1678-1697 | Msa1443000:CDS | 20.0% |
| !!! | ATTTGTGTGTATTTTACATA+GGG | - | tig0030275:1679-1698 | Msa1443000:CDS | 20.0% |
| !!! | CATAAAAGTGATTTTATTAC+CGG | + | tig0030275:2043-2062 | None:intergenic | 20.0% |
| !! | AATACATATACATATGACAA+AGG | - | tig0030275:2124-2143 | Msa1443000:CDS | 20.0% |
| !! | ATACATATACATATGACAAA+GGG | - | tig0030275:2125-2144 | Msa1443000:CDS | 20.0% |
| !!! | GATATTATGTAATTTGTCTT+AGG | + | tig0030275:2311-2330 | None:intergenic | 20.0% |
| !! | ACATATTATTGCTAAATGTA+TGG | - | tig0030275:3248-3267 | Msa1443000:intron | 20.0% |
| !! | TCTATAACTATACAAAAGTA+CGG | + | tig0030275:3431-3450 | None:intergenic | 20.0% |
| !! | AGTTTAAGAAAATAGAAATC+AGG | + | tig0030275:3613-3632 | None:intergenic | 20.0% |
| !!! | TTCTATTTTCTTAAACTTTC+AGG | - | tig0030275:3616-3635 | Msa1443000:CDS | 20.0% |
| !!! | TTTTAGAAAAACTAAGATAC+GGG | - | tig0030275:5476-5495 | Msa1443000:CDS | 20.0% |
| !!! | ATAAGATACAAGATGAATTT+TGG | - | tig0030275:5571-5590 | Msa1443000:intron | 20.0% |
| !! | GATCTTTATAATGCATATAA+AGG | - | tig0030275:6041-6060 | Msa1443000:intron | 20.0% |
| !! | AACCCTAATTTCAACTTTTA+AGG | - | tig0030275:919-938 | Msa1443000:three_prime_UTR | 25.0% |
| ! | GTACCTTAAAAGTTGAAATT+AGG | + | tig0030275:925-944 | None:intergenic | 25.0% |
| !!! | TTTCGTGACAATTTTTCAAT+TGG | - | tig0030275:984-1003 | Msa1443000:three_prime_UTR | 25.0% |
| !!! | TTCGTGACAATTTTTCAATT+GGG | - | tig0030275:985-1004 | Msa1443000:three_prime_UTR | 25.0% |
| !! | TCAATTGGGTTTTCAATTAA+CGG | - | tig0030275:999-1018 | Msa1443000:three_prime_UTR | 25.0% |
| ! | TTGTGAAAATTTGTGATTTG+AGG | - | tig0030275:1131-1150 | Msa1443000:CDS | 25.0% |
| ! | TGTGAAAATTTGTGATTTGA+GGG | - | tig0030275:1132-1151 | Msa1443000:CDS | 25.0% |
| ! | TTTGAATTGTGTAATAGTGT+TGG | - | tig0030275:1433-1452 | Msa1443000:CDS | 25.0% |
| ! | TTTGTGTATATTTGGTTATG+CGG | - | tig0030275:1531-1550 | Msa1443000:CDS | 25.0% |
| !!! | TGGTTTTGTTAAATTGATTC+TGG | - | tig0030275:1579-1598 | Msa1443000:CDS | 25.0% |
| ! | AAGGTAAAGTGATTTATGTT+TGG | - | tig0030275:1629-1648 | Msa1443000:CDS | 25.0% |
| ! | AAAGTGATTTATGTTTGGAT+TGG | - | tig0030275:1634-1653 | Msa1443000:CDS | 25.0% |
| ! | AAGTGATTTATGTTTGGATT+GGG | - | tig0030275:1635-1654 | Msa1443000:CDS | 25.0% |
| ! | CACATTTACAATTTCATGAT+TGG | + | tig0030275:1733-1752 | None:intergenic | 25.0% |
| ! | TTCGGTATTTCTTAAATTTG+AGG | + | tig0030275:1767-1786 | None:intergenic | 25.0% |
| !!! | CGGTAATAAAATCACTTTTA+TGG | - | tig0030275:2041-2060 | Msa1443000:CDS | 25.0% |
| !!! | CTTTTATGGTCTTTATTTGA+TGG | - | tig0030275:2055-2074 | Msa1443000:CDS | 25.0% |
| !! | TCAAGCATTTTATCTTAATC+TGG | + | tig0030275:2104-2123 | None:intergenic | 25.0% |
| ! | AATCAATAAAATAGGAACAG+AGG | + | tig0030275:2481-2500 | None:intergenic | 25.0% |
| !! | TTTTAGTGTCTGGTAAATTA+TGG | - | tig0030275:2813-2832 | Msa1443000:CDS | 25.0% |
| !! | ATGTAATTCATTAGTTTACG+TGG | - | tig0030275:2848-2867 | Msa1443000:CDS | 25.0% |
| !!! | TTTTTTGTTACTCGTAGATT+GGG | - | tig0030275:3047-3066 | Msa1443000:intron | 25.0% |
| !!! | ACGTGTTTTATTGAATTGTA+AGG | - | tig0030275:3276-3295 | Msa1443000:intron | 25.0% |
| ! | TAGTATTCATATCATTCCTT+CGG | + | tig0030275:3479-3498 | None:intergenic | 25.0% |
| ! | TTCACAGGATAACTAAATAT+CGG | + | tig0030275:4454-4473 | None:intergenic | 25.0% |
| ! | TTGACTAATTCTAGTATTTG+TGG | - | tig0030275:4679-4698 | Msa1443000:CDS | 25.0% |
| !!! | TTAACACAATATTTTGGTCT+TGG | - | tig0030275:4995-5014 | Msa1443000:CDS | 25.0% |
| ! | TTAATAGTAATGCTTACCTT+CGG | + | tig0030275:5278-5297 | None:intergenic | 25.0% |
| !! | ACCAAATTTAGAACCAAATA+AGG | - | tig0030275:5944-5963 | Msa1443000:CDS | 25.0% |
| !!! | TTTCCAATGCTTTTAATTCT+GGG | - | tig0030275:6516-6535 | Msa1443000:intron | 25.0% |
| !! | AAAAGTCTATCGAAATTTTG+AGG | + | tig0030275:6878-6897 | None:intergenic | 25.0% |
| !! | ACGAAAAGATAACTTTTAAG+AGG | - | tig0030275:7056-7075 | Msa1443000:intron | 25.0% |
| ! | GTTATTATTAAACAAATGCC+AGG | - | tig0030275:7078-7097 | Msa1443000:intron | 25.0% |
| ! | ATATGGATGTATATTTCGAA+AGG | - | tig0030275:7407-7426 | Msa1443000:intron | 25.0% |
| ! | ACAACATGAATTTATCTTCT+AGG | - | tig0030275:7446-7465 | Msa1443000:intron | 25.0% |
| ! | CAACATGAATTTATCTTCTA+GGG | - | tig0030275:7447-7466 | Msa1443000:intron | 25.0% |
| ! | ATTGACGTATTTGAATTTGT+CGG | + | tig0030275:7891-7910 | None:intergenic | 25.0% |
| ATTAAGGTTAAGGTTAAGGT+TGG | + | tig0030275:698-717 | None:intergenic | 30.0% | |
| GAAGATTAAGGTTAAGGTTA+AGG | + | tig0030275:702-721 | None:intergenic | 30.0% | |
| GTTAATGTGTGTGAAGATTA+AGG | + | tig0030275:714-733 | None:intergenic | 30.0% | |
| !! | TTTTAATGGATCTGCGTTTT+TGG | - | tig0030275:1046-1065 | Msa1443000:CDS | 30.0% |
| !! | TTTAATGGATCTGCGTTTTT+GGG | - | tig0030275:1047-1066 | Msa1443000:CDS | 30.0% |
| ACGCCTATTATCAAAAATCT+GGG | - | tig0030275:1209-1228 | Msa1443000:CDS | 30.0% | |
| !! | GAAAATTCAAAGGAGCATTT+CGG | + | tig0030275:1785-1804 | None:intergenic | 30.0% |
| ACTGAAGTTGGAAAATTCAA+AGG | + | tig0030275:1795-1814 | None:intergenic | 30.0% | |
| TTGAACAATTTGACTGAAGT+TGG | + | tig0030275:1807-1826 | None:intergenic | 30.0% | |
| !! | TTTGGTGTTTCGTAAATTTC+AGG | - | tig0030275:1966-1985 | Msa1443000:CDS | 30.0% |
| AAACTACATGCAACAAAACA+AGG | + | tig0030275:2385-2404 | None:intergenic | 30.0% | |
| ATAAAATAGGAACAGAGGAA+GGG | + | tig0030275:2476-2495 | None:intergenic | 30.0% | |
| AATAAAATAGGAACAGAGGA+AGG | + | tig0030275:2477-2496 | None:intergenic | 30.0% | |
| ATTAGACTTCTTGCTTAAAC+TGG | + | tig0030275:2520-2539 | None:intergenic | 30.0% | |
| AAGAAGTCTAATAATGCACA+AGG | - | tig0030275:2528-2547 | Msa1443000:CDS | 30.0% | |
| TATCTGATTCTTCTCTTCAT+TGG | - | tig0030275:2694-2713 | Msa1443000:CDS | 30.0% | |
| !!! | TTCTTCTCTTCATTGGTTTT+TGG | - | tig0030275:2701-2720 | Msa1443000:CDS | 30.0% |
| ! | AATTCATTAGTTTACGTGGT+AGG | - | tig0030275:2852-2871 | Msa1443000:CDS | 30.0% |
| ATCTACGAGTAACAAAAAAC+AGG | + | tig0030275:3046-3065 | None:intergenic | 30.0% | |
| !!! | GTTTTTTGTTACTCGTAGAT+TGG | - | tig0030275:3046-3065 | Msa1443000:intron | 30.0% |
| TGAATATTTATGTCTGTCTC+AGG | - | tig0030275:3148-3167 | Msa1443000:intron | 30.0% | |
| ! | GTATTCACCTCTATTCTTTT+TGG | - | tig0030275:3388-3407 | Msa1443000:intron | 30.0% |
| !!! | ATCTCTTGCATTAGTTTTCT+CGG | + | tig0030275:3732-3751 | None:intergenic | 30.0% |
| TGAGATTGAATTTGTGGATT+AGG | + | tig0030275:3905-3924 | None:intergenic | 30.0% | |
| TAATCCACAAATTCAATCTC+AGG | - | tig0030275:3904-3923 | Msa1443000:CDS | 30.0% | |
| AATCCACAAATTCAATCTCA+GGG | - | tig0030275:3905-3924 | Msa1443000:CDS | 30.0% | |
| ATAAGTTTCGCTCATCAAAT+GGG | - | tig0030275:4070-4089 | Msa1443000:CDS | 30.0% | |
| TTTAGTTATCCTGTGAACAA+TGG | - | tig0030275:4457-4476 | Msa1443000:CDS | 30.0% | |
| ! | TTGATGAAAGCCATATTTTG+TGG | + | tig0030275:4484-4503 | None:intergenic | 30.0% |
| ACAGTAGTATATCTGATACT+GGG | - | tig0030275:5116-5135 | Msa1443000:CDS | 30.0% | |
| ATCCATGGAACATAGTTTAA+GGG | + | tig0030275:5412-5431 | None:intergenic | 30.0% | |
| TATCCATGGAACATAGTTTA+AGG | + | tig0030275:5413-5432 | None:intergenic | 30.0% | |
| TAAACTATGTTCCATGGATA+CGG | - | tig0030275:5413-5432 | Msa1443000:intron | 30.0% | |
| !! | TATTAAAAGCTCTGAAGCAT+AGG | + | tig0030275:5554-5573 | None:intergenic | 30.0% |
| !!! | TTTTAAAAGCTCTGAAGCAT+AGG | + | tig0030275:5651-5670 | None:intergenic | 30.0% |
| !!! | GCTTTTAAAACAATACCGAA+AGG | - | tig0030275:5661-5680 | Msa1443000:CDS | 30.0% |
| !! | TGTACTATCATTGATTTCCT+TGG | + | tig0030275:5871-5890 | None:intergenic | 30.0% |
| TTCTAAATTTGGTCTATCCT+TGG | + | tig0030275:5937-5956 | None:intergenic | 30.0% | |
| !! | GCCTTATTTGGTTCTAAATT+TGG | + | tig0030275:5948-5967 | None:intergenic | 30.0% |
| !! | AATGTAGTTTTCGCCTTATT+TGG | + | tig0030275:5960-5979 | None:intergenic | 30.0% |
| TTATCATCAACTTCAAGCTT+TGG | + | tig0030275:6245-6264 | None:intergenic | 30.0% | |
| !!! | TCCTGAAGGTTTTGAAATTA+CGG | - | tig0030275:6355-6374 | Msa1443000:intron | 30.0% |
| !! | GTTTCCAATGCTTTTAATTC+TGG | - | tig0030275:6515-6534 | Msa1443000:intron | 30.0% |
| ! | TTTCGATAGACTTTTTGAAC+AGG | - | tig0030275:6883-6902 | Msa1443000:intron | 30.0% |
| ATTATTAAACAAATGCCAGG+AGG | - | tig0030275:7081-7100 | Msa1443000:intron | 30.0% | |
| TCAAACTGTCAAATGAAGAA+AGG | - | tig0030275:7167-7186 | Msa1443000:intron | 30.0% | |
| CAAACTGTCAAATGAAGAAA+GGG | - | tig0030275:7168-7187 | Msa1443000:intron | 30.0% | |
| TTAGGAAACATCAGATTGAT+TGG | - | tig0030275:7223-7242 | Msa1443000:intron | 30.0% | |
| GAGTGTATAAAGAAGTTACT+AGG | - | tig0030275:7289-7308 | Msa1443000:intron | 30.0% | |
| !! | AGGATGTAATTGATTTGAGA+AGG | - | tig0030275:7485-7504 | Msa1443000:intron | 30.0% |
| ! | TTGATTTGAGAAGGAATAGA+TGG | - | tig0030275:7494-7513 | Msa1443000:intron | 30.0% |
| TTGAGGATAATTAATTGGCA+AGG | + | tig0030275:7796-7815 | None:intergenic | 30.0% | |
| ! | GGTCTTTGAGGATAATTAAT+TGG | + | tig0030275:7801-7820 | None:intergenic | 30.0% |
| GGTAATGAGTCTATAACATT+GGG | - | tig0030275:7825-7844 | Msa1443000:intron | 30.0% | |
| GCAGCTCATAATATAAACTA+TGG | - | tig0030275:8077-8096 | Msa1443000:five_prime_UTR | 30.0% | |
| ATGATGATCGGAATCTAAAT+AGG | - | tig0030275:8117-8136 | Msa1443000:five_prime_UTR | 30.0% | |
| !! | TTCCAAGTGTTGAAGTGAAT+AGG | - | tig0030275:628-647 | Msa1443000:three_prime_UTR | 35.0% |
| !!! | AGGTTTTTTAGGAGAGATTG+CGG | + | tig0030275:665-684 | None:intergenic | 35.0% |
| GTGTGTGAAGATTAAGGTTA+AGG | + | tig0030275:708-727 | None:intergenic | 35.0% | |
| GAAGAGAGAGAAAGTTGAAT+AGG | + | tig0030275:762-781 | None:intergenic | 35.0% | |
| AGTGAAAGAGAAACCAGAAT+TGG | + | tig0030275:812-831 | None:intergenic | 35.0% | |
| CACGAAAATGAATGAAAGTG+AGG | + | tig0030275:971-990 | None:intergenic | 35.0% | |
| TGTGATTTGAGGGATTATTC+AGG | - | tig0030275:1142-1161 | Msa1443000:CDS | 35.0% | |
| TTTGAGGGATTATTCAGGAT+TGG | - | tig0030275:1147-1166 | Msa1443000:CDS | 35.0% | |
| !!! | TTCGGTTTTTGGTTGATTGA+AGG | + | tig0030275:1182-1201 | None:intergenic | 35.0% |
| !! | ATAATAGGCGTCGTTCTTTT+CGG | + | tig0030275:1200-1219 | None:intergenic | 35.0% |
| GACGCCTATTATCAAAAATC+TGG | - | tig0030275:1208-1227 | Msa1443000:CDS | 35.0% | |
| !! | TCGCCCAGATTTTTGATAAT+AGG | + | tig0030275:1215-1234 | None:intergenic | 35.0% |
| !! | TGTAATAGTGTTGGTCGATA+TGG | - | tig0030275:1442-1461 | Msa1443000:CDS | 35.0% |
| !! | TCGATATGGATTGGGAAAAT+GGG | - | tig0030275:1456-1475 | Msa1443000:CDS | 35.0% |
| ! | TTATGTTTGGATTGGGAAAC+TGG | - | tig0030275:1642-1661 | Msa1443000:CDS | 35.0% |
| ! | TATGTTTGGATTGGGAAACT+GGG | - | tig0030275:1643-1662 | Msa1443000:CDS | 35.0% |
| ! | ATTTCATGATTGGTCCAAGA+TGG | + | tig0030275:1723-1742 | None:intergenic | 35.0% |
| ATGAGCAATTTGTAACAACG+CGG | - | tig0030275:1894-1913 | Msa1443000:CDS | 35.0% | |
| ! | GAAAATTCAAGGCAGCATTT+TGG | - | tig0030275:1948-1967 | Msa1443000:CDS | 35.0% |
| TGCAATTTCACAACCCAAAA+TGG | - | tig0030275:2010-2029 | Msa1443000:CDS | 35.0% | |
| AACCCAAAATGGTTGTTTAC+CGG | - | tig0030275:2021-2040 | Msa1443000:CDS | 35.0% | |
| ! | TACCGGTAAACAACCATTTT+GGG | + | tig0030275:2026-2045 | None:intergenic | 35.0% |
| ! | TTACCGGTAAACAACCATTT+TGG | + | tig0030275:2027-2046 | None:intergenic | 35.0% |
| TTCACTAACAAGTGTCCTAA+GGG | - | tig0030275:2269-2288 | Msa1443000:CDS | 35.0% | |
| AAATGCTAACATGTTCCCTT+AGG | + | tig0030275:2287-2306 | None:intergenic | 35.0% | |
| TAAAATAGGAACAGAGGAAG+GGG | + | tig0030275:2475-2494 | None:intergenic | 35.0% | |
| AAGTCTAATAATGCACAAGG+TGG | - | tig0030275:2531-2550 | Msa1443000:CDS | 35.0% | |
| AGTCTAATAATGCACAAGGT+GGG | - | tig0030275:2532-2551 | Msa1443000:CDS | 35.0% | |
| AAGATCCCTTCTGCTTTATA+CGG | - | tig0030275:2765-2784 | Msa1443000:CDS | 35.0% | |
| !! | AATGTTTGCGTTTTAGTGTC+TGG | - | tig0030275:2803-2822 | Msa1443000:CDS | 35.0% |
| ! | ATTAGTTTACGTGGTAGGAT+AGG | - | tig0030275:2857-2876 | Msa1443000:CDS | 35.0% |
| ! | GTACATTTTGAGCAACTCTA+GGG | + | tig0030275:2937-2956 | None:intergenic | 35.0% |
| CAATCGATCCAAACTGAAAA+GGG | + | tig0030275:3192-3211 | None:intergenic | 35.0% | |
| ACAATCGATCCAAACTGAAA+AGG | + | tig0030275:3193-3212 | None:intergenic | 35.0% | |
| !! | ATTGTTCCTGGTGTTATGAA+TGG | - | tig0030275:3208-3227 | Msa1443000:intron | 35.0% |
| !! | TTGTTCCTGGTGTTATGAAT+GGG | - | tig0030275:3209-3228 | Msa1443000:intron | 35.0% |
| TTCTGCTCATCTAAATTAGG+AGG | + | tig0030275:3358-3377 | None:intergenic | 35.0% | |
| !! | GAAAGTGCCAAAAAGAATAG+AGG | + | tig0030275:3398-3417 | None:intergenic | 35.0% |
| ! | ATACAAAAGTACGGACATCA+AGG | + | tig0030275:3422-3441 | None:intergenic | 35.0% |
| TAATGCAAGAGATACTCATC+TGG | - | tig0030275:3739-3758 | Msa1443000:CDS | 35.0% | |
| AATGCAAGAGATACTCATCT+GGG | - | tig0030275:3740-3759 | Msa1443000:CDS | 35.0% | |
| ATCCACAAATTCAATCTCAG+GGG | - | tig0030275:3906-3925 | Msa1443000:CDS | 35.0% | |
| ATTGGCATAGGAATATGCAT+GGG | + | tig0030275:3944-3963 | None:intergenic | 35.0% | |
| TGAAGACCTGGAATAAAAAC+CGG | + | tig0030275:4004-4023 | None:intergenic | 35.0% | |
| GATGAGCGAAACTTATGTTA+TGG | + | tig0030275:4066-4085 | None:intergenic | 35.0% | |
| CATAAGTTTCGCTCATCAAA+TGG | - | tig0030275:4069-4088 | Msa1443000:CDS | 35.0% | |
| ! | TTGACAGTAGTAGTTTTTCG+AGG | + | tig0030275:4181-4200 | None:intergenic | 35.0% |
| AAGAGCTAAGGCTTGATAAA+AGG | - | tig0030275:4224-4243 | Msa1443000:CDS | 35.0% | |
| AGAGCTAAGGCTTGATAAAA+GGG | - | tig0030275:4225-4244 | Msa1443000:CDS | 35.0% | |
| ! | AGCAATGGATTTAACAGGAT+GGG | + | tig0030275:4314-4333 | None:intergenic | 35.0% |
| CCTTCGAATTATTATCCTTC+CGG | - | tig0030275:4343-4362 | Msa1443000:CDS | 35.0% | |
| ! | GTTATCTGGCTACTTGTTAA+CGG | + | tig0030275:4415-4434 | None:intergenic | 35.0% |
| ACAGGATAACTAAATATCGG+TGG | + | tig0030275:4451-4470 | None:intergenic | 35.0% | |
| GAACAATGGTCCACAAAATA+TGG | - | tig0030275:4471-4490 | Msa1443000:CDS | 35.0% | |
| AGAAACACCACTTGGTTTAA+TGG | + | tig0030275:4641-4660 | None:intergenic | 35.0% | |
| ACAGCATTCTAAATCTTCTG+AGG | - | tig0030275:4738-4757 | Msa1443000:CDS | 35.0% | |
| TAATAATGAAGCCAACACGA+GGG | - | tig0030275:4876-4895 | Msa1443000:CDS | 35.0% | |
| AAGGATAACCAGAAGAAATC+TGG | - | tig0030275:4925-4944 | Msa1443000:CDS | 35.0% | |
| AGGATAACCAGAAGAAATCT+GGG | - | tig0030275:4926-4945 | Msa1443000:CDS | 35.0% | |
| ! | CTATTTTCCCAGATTTCTTC+TGG | + | tig0030275:4936-4955 | None:intergenic | 35.0% |
| CAGAAGAAATCTGGGAAAAT+AGG | - | tig0030275:4934-4953 | Msa1443000:CDS | 35.0% | |
| AACCTGTAGGAAAAGTCAAA+AGG | + | tig0030275:5050-5069 | None:intergenic | 35.0% | |
| GACAGTAGTATATCTGATAC+TGG | - | tig0030275:5115-5134 | Msa1443000:CDS | 35.0% | |
| CAGTAGTATATCTGATACTG+GGG | - | tig0030275:5117-5136 | Msa1443000:CDS | 35.0% | |
| AGATCTTCAGTGATAATTGC+AGG | + | tig0030275:5178-5197 | None:intergenic | 35.0% | |
| AACCCTTAAACTATGTTCCA+TGG | - | tig0030275:5407-5426 | Msa1443000:intron | 35.0% | |
| AAACTATGTTCCATGGATAC+GGG | - | tig0030275:5414-5433 | Msa1443000:intron | 35.0% | |
| ! | ATGTCTTTCTTCAGAGCTTT+TGG | - | tig0030275:5521-5540 | Msa1443000:intron | 35.0% |
| TAAAACAATACCGAAAGGAC+AGG | - | tig0030275:5666-5685 | Msa1443000:CDS | 35.0% | |
| !!! | GAATCTGCTAGTTTTAAGTC+AGG | - | tig0030275:5691-5710 | Msa1443000:intron | 35.0% |
| ACTAGAATCCAATGCAGTAT+AGG | + | tig0030275:5749-5768 | None:intergenic | 35.0% | |
| GATTCTAGTGATGTCTCTTT+AGG | - | tig0030275:5760-5779 | Msa1443000:intron | 35.0% | |
| TGATTTACCAGAAACAACCA+AGG | - | tig0030275:5851-5870 | Msa1443000:CDS | 35.0% | |
| ! | TTGATTTCCTTGGTTGTTTC+TGG | + | tig0030275:5861-5880 | None:intergenic | 35.0% |
| ATAAAGATCAGAAGTTGTCC+CGG | + | tig0030275:6030-6049 | None:intergenic | 35.0% | |
| TAATGCATATAAAGGACCTG+AGG | - | tig0030275:6049-6068 | Msa1443000:intron | 35.0% | |
| GAAAGTGAATCTACATCTGA+AGG | - | tig0030275:6107-6126 | Msa1443000:intron | 35.0% | |
| !! | AGTTGATGATAAATCTCAGC+AGG | - | tig0030275:6253-6272 | Msa1443000:CDS | 35.0% |
| ! | AAATCTCAGCAGGTTTTTGA+TGG | - | tig0030275:6263-6282 | Msa1443000:CDS | 35.0% |
| ! | TTTTGATGGAAGTGGAAGTA+CGG | - | tig0030275:6277-6296 | Msa1443000:CDS | 35.0% |
| GCTTTGATGAATTCCAATGT+TGG | - | tig0030275:6392-6411 | Msa1443000:intron | 35.0% | |
| ATCACGAGAATTACCAACAT+TGG | + | tig0030275:6408-6427 | None:intergenic | 35.0% | |
| !!! | GAGGCAATTTTGGTGTTTTA+AGG | - | tig0030275:6579-6598 | Msa1443000:intron | 35.0% |
| ! | GCTGAGAAGAAGTATGAAAT+AGG | - | tig0030275:6788-6807 | Msa1443000:intron | 35.0% |
| !! | TTTGAGGAGTTAGTTTGTTC+AGG | + | tig0030275:6862-6881 | None:intergenic | 35.0% |
| AGAACAAGAAGAGGCAAATA+AGG | - | tig0030275:7123-7142 | Msa1443000:intron | 35.0% | |
| AGAAGAAAATGTTGACAGAG+AGG | - | tig0030275:7257-7276 | Msa1443000:intron | 35.0% | |
| ! | TCCATATGTTCCTTAGCTTT+GGG | + | tig0030275:7394-7413 | None:intergenic | 35.0% |
| ATCCATATGTTCCTTAGCTT+TGG | + | tig0030275:7395-7414 | None:intergenic | 35.0% | |
| TAGGGTGAGATTTATGTTGA+AGG | - | tig0030275:7465-7484 | Msa1443000:intron | 35.0% | |
| CAAGTAAGGAGAAAAGTTGA+TGG | - | tig0030275:7517-7536 | Msa1443000:intron | 35.0% | |
| ! | TTGATGGTCCAAAAAGATTG+AGG | - | tig0030275:7533-7552 | Msa1443000:intron | 35.0% |
| GAAACAATCAATCTGCAAGA+AGG | - | tig0030275:7625-7644 | Msa1443000:CDS | 35.0% | |
| TAATTAATTGGCAAGGTCCT+AGG | + | tig0030275:7789-7808 | None:intergenic | 35.0% | |
| TAATTATCCTCAAAGACCCT+TGG | - | tig0030275:7803-7822 | Msa1443000:intron | 35.0% | |
| AATTATCCTCAAAGACCCTT+GGG | - | tig0030275:7804-7823 | Msa1443000:intron | 35.0% | |
| GTTATAGACTCATTACCCAA+GGG | + | tig0030275:7822-7841 | None:intergenic | 35.0% | |
| TGTTATAGACTCATTACCCA+AGG | + | tig0030275:7823-7842 | None:intergenic | 35.0% | |
| GGGTAATGAGTCTATAACAT+TGG | - | tig0030275:7824-7843 | Msa1443000:intron | 35.0% | |
| ACTATGGTAACAGAGACTTA+AGG | - | tig0030275:8093-8112 | Msa1443000:five_prime_UTR | 35.0% | |
| GAGACTTAAGGAATGATGAT+CGG | - | tig0030275:8105-8124 | Msa1443000:five_prime_UTR | 35.0% | |
| !! | GATGCATTTTGAGAGACAAT+TGG | + | tig0030275:8179-8198 | None:intergenic | 35.0% |
| CACCTATTCACTTCAACACT+TGG | + | tig0030275:633-652 | None:intergenic | 40.0% | |
| !!! | GTCAAGGTGGTAGGTTTTTT+AGG | + | tig0030275:676-695 | None:intergenic | 40.0% |
| ! | GTTAAGGTTAAGGTTGGTCA+AGG | + | tig0030275:692-711 | None:intergenic | 40.0% |
| AGAATTGGAAGAGATTGTGG+AGG | + | tig0030275:797-816 | None:intergenic | 40.0% | |
| TCCACAATCTCTTCCAATTC+TGG | - | tig0030275:796-815 | Msa1443000:three_prime_UTR | 40.0% | |
| ACCAGAATTGGAAGAGATTG+TGG | + | tig0030275:800-819 | None:intergenic | 40.0% | |
| !!! | TGCAGGGAAGTTTTGAAAAG+AGG | - | tig0030275:1072-1091 | Msa1443000:CDS | 40.0% |
| !! | TCTAGCTTTAATCAGCAGAG+AGG | - | tig0030275:1238-1257 | Msa1443000:CDS | 40.0% |
| CTCTAATAGGAGGTCAGTTA+GGG | - | tig0030275:1318-1337 | Msa1443000:CDS | 40.0% | |
| !! | TAGTGTTGGTCGATATGGAT+TGG | - | tig0030275:1447-1466 | Msa1443000:CDS | 40.0% |
| !! | AGTGTTGGTCGATATGGATT+GGG | - | tig0030275:1448-1467 | Msa1443000:CDS | 40.0% |
| !! | GTCGATATGGATTGGGAAAA+TGG | - | tig0030275:1455-1474 | Msa1443000:CDS | 40.0% |
| !! | CGATATGGATTGGGAAAATG+GGG | - | tig0030275:1457-1476 | Msa1443000:CDS | 40.0% |
| !! | GATATGGATTGGGAAAATGG+GGG | - | tig0030275:1458-1477 | Msa1443000:CDS | 40.0% |
| !! | ATATGGATTGGGAAAATGGG+GGG | - | tig0030275:1459-1478 | Msa1443000:CDS | 40.0% |
| AAAAGAGTAAACCGCCATCT+TGG | - | tig0030275:1706-1725 | Msa1443000:CDS | 40.0% | |
| ! | TGTCACGTTAAGTGTCATTG+TGG | - | tig0030275:1854-1873 | Msa1443000:CDS | 40.0% |
| AAATTGCTCATGTATCCACG+TGG | + | tig0030275:1885-1904 | None:intergenic | 40.0% | |
| GACTGACGTTCGAAAATTCA+AGG | - | tig0030275:1937-1956 | Msa1443000:CDS | 40.0% | |
| GCAAGTGACTGTCACAAATT+GGG | + | tig0030275:1993-2012 | None:intergenic | 40.0% | |
| TGCAAGTGACTGTCACAAAT+TGG | + | tig0030275:1994-2013 | None:intergenic | 40.0% | |
| TGACAAAGGGTCTTGCTAAT+AGG | - | tig0030275:2138-2157 | Msa1443000:CDS | 40.0% | |
| GACAAAGGGTCTTGCTAATA+GGG | - | tig0030275:2139-2158 | Msa1443000:CDS | 40.0% | |
| TGCTAATAGGGCACATGTTA+AGG | - | tig0030275:2151-2170 | Msa1443000:CDS | 40.0% | |
| CTTCACTAACAAGTGTCCTA+AGG | - | tig0030275:2268-2287 | Msa1443000:CDS | 40.0% | |
| TTCTCCCATTATGAGTAGTG+TGG | - | tig0030275:2432-2451 | Msa1443000:CDS | 40.0% | |
| GAGACCACACTACTCATAAT+GGG | + | tig0030275:2439-2458 | None:intergenic | 40.0% | |
| AGAGACCACACTACTCATAA+TGG | + | tig0030275:2440-2459 | None:intergenic | 40.0% | |
| CAGTTGAATTCACTGGTGAA+GGG | + | tig0030275:2572-2591 | None:intergenic | 40.0% | |
| TCAGTTGAATTCACTGGTGA+AGG | + | tig0030275:2573-2592 | None:intergenic | 40.0% | |
| ! | TTTGGCTCAGTTGAATTCAC+TGG | + | tig0030275:2579-2598 | None:intergenic | 40.0% |
| ! | TACATGAGTACCGTTATGCA+TGG | + | tig0030275:2622-2641 | None:intergenic | 40.0% |
| TAAAGCTTACCATGCATCTG+CGG | + | tig0030275:2648-2667 | None:intergenic | 40.0% | |
| !!! | CTTCATTGGTTTTTGGTGTC+TGG | - | tig0030275:2708-2727 | Msa1443000:CDS | 40.0% |
| AGATCCCTTCTGCTTTATAC+GGG | - | tig0030275:2766-2785 | Msa1443000:CDS | 40.0% | |
| TCTTCCCGTATAAAGCAGAA+GGG | + | tig0030275:2773-2792 | None:intergenic | 40.0% | |
| TTCTTCCCGTATAAAGCAGA+AGG | + | tig0030275:2774-2793 | None:intergenic | 40.0% | |
| ! | GGTACATTTTGAGCAACTCT+AGG | + | tig0030275:2938-2957 | None:intergenic | 40.0% |
| TGACTAACATACCCTTAGCA+GGG | + | tig0030275:3009-3028 | None:intergenic | 40.0% | |
| TTGACTAACATACCCTTAGC+AGG | + | tig0030275:3010-3029 | None:intergenic | 40.0% | |
| TGTCTCAGGAGATACATCAA+AGG | - | tig0030275:3162-3181 | Msa1443000:intron | 40.0% | |
| !! | AAGGCATTCCCTTTTCAGTT+TGG | - | tig0030275:3181-3200 | Msa1443000:intron | 40.0% |
| !! | TGTTCCTGGTGTTATGAATG+GGG | - | tig0030275:3210-3229 | Msa1443000:intron | 40.0% |
| CGCTTCTGCTCATCTAAATT+AGG | + | tig0030275:3361-3380 | None:intergenic | 40.0% | |
| !! | ATCATTCCTTCGGAAGCATT+GGG | + | tig0030275:3469-3488 | None:intergenic | 40.0% |
| ! | TATCATTCCTTCGGAAGCAT+TGG | + | tig0030275:3470-3489 | None:intergenic | 40.0% |
| GTTACAACTGCATCATTCCT+AGG | + | tig0030275:3710-3729 | None:intergenic | 40.0% | |
| ATGCAAGAGATACTCATCTG+GGG | - | tig0030275:3741-3760 | Msa1443000:CDS | 40.0% | |
| TCACAGCCATCTTTACAGTT+TGG | - | tig0030275:3875-3894 | Msa1443000:intron | 40.0% | |
| ATCCCCTGAGATTGAATTTG+TGG | + | tig0030275:3911-3930 | None:intergenic | 40.0% | |
| CATTGGCATAGGAATATGCA+TGG | + | tig0030275:3945-3964 | None:intergenic | 40.0% | |
| !! | ATTGGTATAGGCATTGGCAT+AGG | + | tig0030275:3956-3975 | None:intergenic | 40.0% |
| ATGCCAATGCCTATACCAAT+CGG | - | tig0030275:3956-3975 | Msa1443000:CDS | 40.0% | |
| TTTCCGATTGGTATAGGCAT+TGG | + | tig0030275:3962-3981 | None:intergenic | 40.0% | |
| CCAACATTTCCGATTGGTAT+AGG | + | tig0030275:3968-3987 | None:intergenic | 40.0% | |
| CCTATACCAATCGGAAATGT+TGG | - | tig0030275:3965-3984 | Msa1443000:CDS | 40.0% | |
| ACTTGTCCAACATTTCCGAT+TGG | + | tig0030275:3974-3993 | None:intergenic | 40.0% | |
| GCGAAACTTATGTTATGGCT+TGG | + | tig0030275:4061-4080 | None:intergenic | 40.0% | |
| ! | TTAGCTCTTCATGCGTTTCA+GGG | + | tig0030275:4213-4232 | None:intergenic | 40.0% |
| CAGATGGATATTCAGATGGT+GGG | - | tig0030275:4248-4267 | Msa1443000:CDS | 40.0% | |
| ! | TGGGATTGAGAAGGTACATT+AGG | + | tig0030275:4295-4314 | None:intergenic | 40.0% |
| TTAACAGGATGGGATTGAGA+AGG | + | tig0030275:4304-4323 | None:intergenic | 40.0% | |
| ! | CAGCAATGGATTTAACAGGA+TGG | + | tig0030275:4315-4334 | None:intergenic | 40.0% |
| ! | GAAGCAGCAATGGATTTAAC+AGG | + | tig0030275:4319-4338 | None:intergenic | 40.0% |
| CCGGAAGGATAATAATTCGA+AGG | + | tig0030275:4346-4365 | None:intergenic | 40.0% | |
| GAACTAGGAGGTGGATAATA+GGG | + | tig0030275:4388-4407 | None:intergenic | 40.0% | |
| AGAACTAGGAGGTGGATAAT+AGG | + | tig0030275:4389-4408 | None:intergenic | 40.0% | |
| CTTGTTAACGGAAGAGAACT+AGG | + | tig0030275:4403-4422 | None:intergenic | 40.0% | |
| ! | TTTTGTGGACCATTGTTCAC+AGG | + | tig0030275:4469-4488 | None:intergenic | 40.0% |
| !! | AGGAGTGCTGACTTTAGTAA+CGG | + | tig0030275:4530-4549 | None:intergenic | 40.0% |
| !! | GAAGCTGATGATGTCACTTT+AGG | + | tig0030275:4601-4620 | None:intergenic | 40.0% |
| AGTGACATCATCAGCTTCAA+CGG | - | tig0030275:4603-4622 | Msa1443000:CDS | 40.0% | |
| TCTGTGACCATTAAACCAAG+TGG | - | tig0030275:4631-4650 | Msa1443000:CDS | 40.0% | |
| ! | ACAGATGCAGCAGATTGTTT+TGG | + | tig0030275:4787-4806 | None:intergenic | 40.0% |
| CTAATAATGAAGCCAACACG+AGG | - | tig0030275:4875-4894 | Msa1443000:CDS | 40.0% | |
| TAGTAGGTCCAACTCTTCAA+AGG | - | tig0030275:4906-4925 | Msa1443000:CDS | 40.0% | |
| ! | CTGGTTATCCTTTGAAGAGT+TGG | + | tig0030275:4917-4936 | None:intergenic | 40.0% |
| AGGTCAATCATCTGAAGATC+AGG | - | tig0030275:4954-4973 | Msa1443000:CDS | 40.0% | |
| !!! | TGCCTTTTGACTTTTCCTAC+AGG | - | tig0030275:5045-5064 | Msa1443000:CDS | 40.0% |
| !! | TGGTTTGTTTCACTTCCTAC+AGG | + | tig0030275:5151-5170 | None:intergenic | 40.0% |
| CAGTGATAATTGCAGGAGAA+TGG | + | tig0030275:5171-5190 | None:intergenic | 40.0% | |
| GAAGATCTTCTCACATCTGA+AGG | - | tig0030275:5190-5209 | Msa1443000:CDS | 40.0% | |
| TGAAGGATCTATTGCTGAAG+TGG | - | tig0030275:5207-5226 | Msa1443000:intron | 40.0% | |
| AAGATAGACGAATCATCCGA+AGG | - | tig0030275:5259-5278 | Msa1443000:intron | 40.0% | |
| !! | TAAAAGCTCTGAAGCATAGG+AGG | + | tig0030275:5551-5570 | None:intergenic | 40.0% |
| !! | TAAAAGCTCTGAAGCATAGG+AGG | + | tig0030275:5551-5570 | None:intergenic | 40.0% |
| !!! | CTAGTTTTAAGTCAGGTGAC+AGG | - | tig0030275:5698-5717 | Msa1443000:intron | 40.0% |
| CATACCAACCTATACTGCAT+TGG | - | tig0030275:5738-5757 | Msa1443000:intron | 40.0% | |
| GAATCCAATGCAGTATAGGT+TGG | + | tig0030275:5745-5764 | None:intergenic | 40.0% | |
| ! | CCAGTTTCTTTCTTTTCCTC+AGG | + | tig0030275:6068-6087 | None:intergenic | 40.0% |
| CCTGAGGAAAAGAAAGAAAC+TGG | - | tig0030275:6065-6084 | Msa1443000:intron | 40.0% | |
| ATCTAACTGAGCAGAATCTG+TGG | + | tig0030275:6147-6166 | None:intergenic | 40.0% | |
| ACAGATTCTGCTCAGTTAGA+TGG | - | tig0030275:6146-6165 | Msa1443000:intron | 40.0% | |
| CAATGCATTACTCTTCCTGA+AGG | - | tig0030275:6341-6360 | Msa1443000:intron | 40.0% | |
| GCCGTAATTTCAAAACCTTC+AGG | + | tig0030275:6359-6378 | None:intergenic | 40.0% | |
| ! | ACGCCCAGAATTAAAAGCAT+TGG | + | tig0030275:6522-6541 | None:intergenic | 40.0% |
| !! | AATGCTTTTAATTCTGGGCG+TGG | - | tig0030275:6521-6540 | Msa1443000:intron | 40.0% |
| !! | TTTTAATTCTGGGCGTGGTT+TGG | - | tig0030275:6526-6545 | Msa1443000:intron | 40.0% |
| AAACACCAAAATTGCCTCCT+TGG | + | tig0030275:6577-6596 | None:intergenic | 40.0% | |
| ATGCAAAGAAATAGCCCTGA+CGG | - | tig0030275:6683-6702 | Msa1443000:intron | 40.0% | |
| ! | TAAAGTGTCAGATGCAGAAG+AGG | - | tig0030275:6811-6830 | Msa1443000:intron | 40.0% |
| CATCTCACAAATCTTCGAGA+AGG | - | tig0030275:6949-6968 | Msa1443000:intron | 40.0% | |
| GCATACATTTCACAGAAGGT+AGG | + | tig0030275:6986-7005 | None:intergenic | 40.0% | |
| GTTGGCATACATTTCACAGA+AGG | + | tig0030275:6990-7009 | None:intergenic | 40.0% | |
| ! | TGAGTTACCTGATTTGAGTG+TGG | - | tig0030275:7030-7049 | Msa1443000:intron | 40.0% |
| !! | AGAGGCAAATAAGGTTGATG+AGG | - | tig0030275:7132-7151 | Msa1443000:intron | 40.0% |
| TGCAAGCTGATGAGTACTAT+TGG | - | tig0030275:7352-7371 | Msa1443000:intron | 40.0% | |
| GCAAGCTGATGAGTACTATT+GGG | - | tig0030275:7353-7372 | Msa1443000:intron | 40.0% | |
| CAAGCTGATGAGTACTATTG+GGG | - | tig0030275:7354-7373 | Msa1443000:intron | 40.0% | |
| !! | TATGTTCCTTAGCTTTGGGA+TGG | + | tig0030275:7390-7409 | None:intergenic | 40.0% |
| TCCCAAAGCTAAGGAACATA+TGG | - | tig0030275:7390-7409 | Msa1443000:intron | 40.0% | |
| GAAGGAATAGATGGCAAGTA+AGG | - | tig0030275:7503-7522 | Msa1443000:intron | 40.0% | |
| ATGGTCCAAAAAGATTGAGG+AGG | - | tig0030275:7536-7555 | Msa1443000:CDS | 40.0% | |
| ! | GTGTACCTCCTCAATCTTTT+TGG | + | tig0030275:7544-7563 | None:intergenic | 40.0% |
| TTGTCTCCTACTTCTCCAAT+GGG | - | tig0030275:7684-7703 | Msa1443000:exon | 40.0% | |
| TCTACTCAAACACGTGGATA+TGG | - | tig0030275:7723-7742 | Msa1443000:five_prime_UTR | 40.0% | |
| AACACGTGGATATGGTTTAC+AGG | - | tig0030275:7731-7750 | Msa1443000:five_prime_UTR | 40.0% | |
| !!! | AGGATGCTCGTTTTGAAGAA+AGG | - | tig0030275:7751-7770 | Msa1443000:five_prime_UTR | 40.0% |
| AAAGGCAATCTTATGAGCCT+AGG | - | tig0030275:7769-7788 | Msa1443000:intron | 40.0% | |
| TCAATACCTGATGTGCATTC+TGG | - | tig0030275:7906-7925 | Msa1443000:intron | 40.0% | |
| AGAATGCCTAGCGGTATTAA+TGG | - | tig0030275:7945-7964 | Msa1443000:five_prime_UTR | 40.0% | |
| CCATAACCATTAATACCGCT+AGG | + | tig0030275:7954-7973 | None:intergenic | 40.0% | |
| CCTAGCGGTATTAATGGTTA+TGG | - | tig0030275:7951-7970 | Msa1443000:five_prime_UTR | 40.0% | |
| CTTGAATGATCATATCCAGC+TGG | + | tig0030275:8053-8072 | None:intergenic | 40.0% | |
| CATCTACAGATGAACGACTA+CGG | - | tig0030275:8195-8214 | Msa1443000:five_prime_UTR | 40.0% | |
| ATCTACAGATGAACGACTAC+GGG | - | tig0030275:8196-8215 | Msa1443000:five_prime_UTR | 40.0% | |
| ! | TTAAGGTTGGTCAAGGTGGT+AGG | + | tig0030275:685-704 | None:intergenic | 45.0% |
| ! | AAGGTTAAGGTTGGTCAAGG+TGG | + | tig0030275:689-708 | None:intergenic | 45.0% |
| GAAAGTGAGACAGACAAGAG+AGG | + | tig0030275:736-755 | None:intergenic | 45.0% | |
| GGGGAAGAAGAAGAAGAAGA+GGG | + | tig0030275:839-858 | None:intergenic | 45.0% | |
| AGGGGAAGAAGAAGAAGAAG+AGG | + | tig0030275:840-859 | None:intergenic | 45.0% | |
| ! | AGTACTGAGAGAGAGAGAGA+GGG | + | tig0030275:878-897 | None:intergenic | 45.0% |
| !!! | ATCTGCGTTTTTGGGTTTGC+AGG | - | tig0030275:1055-1074 | Msa1443000:CDS | 45.0% |
| !!! | TCTGCGTTTTTGGGTTTGCA+GGG | - | tig0030275:1056-1075 | Msa1443000:CDS | 45.0% |
| ! | GCGTCGTTCTTTTCGGTTTT+TGG | + | tig0030275:1193-1212 | None:intergenic | 45.0% |
| CTTCGTCACTCTCCTCTAAT+AGG | - | tig0030275:1305-1324 | Msa1443000:CDS | 45.0% | |
| CCTAACTGACCTCCTATTAG+AGG | + | tig0030275:1320-1339 | None:intergenic | 45.0% | |
| CCTCTAATAGGAGGTCAGTT+AGG | - | tig0030275:1317-1336 | Msa1443000:CDS | 45.0% | |
| !! | TATGGATTGGGAAAATGGGG+GGG | - | tig0030275:1460-1479 | Msa1443000:CDS | 45.0% |
| ! | TCATGATTGGTCCAAGATGG+CGG | + | tig0030275:1720-1739 | None:intergenic | 45.0% |
| TTTGTAACAACGCGGCTTGA+CGG | - | tig0030275:1902-1921 | Msa1443000:CDS | 45.0% | |
| TGGAGTGTGAACTTCACTCA+TGG | + | tig0030275:2084-2103 | None:intergenic | 45.0% | |
| ATGCACAAGGTGGGCAATAT+AGG | - | tig0030275:2541-2560 | Msa1443000:CDS | 45.0% | |
| TGCACAAGGTGGGCAATATA+GGG | - | tig0030275:2542-2561 | Msa1443000:CDS | 45.0% | |
| CAAACAGTACTTACGCTGCT+CGG | - | tig0030275:2595-2614 | Msa1443000:CDS | 45.0% | |
| AAAGCAGAAGGGATCTTCTC+AGG | + | tig0030275:2762-2781 | None:intergenic | 45.0% | |
| !! | GTAGGATAGGAGCATCTGAT+GGG | - | tig0030275:2870-2889 | Msa1443000:CDS | 45.0% |
| GATTCAGATGCCTTTGCAAC+CGG | + | tig0030275:2896-2915 | None:intergenic | 45.0% | |
| CAGTTTGGATCGATTGTTCC+TGG | - | tig0030275:3196-3215 | Msa1443000:intron | 45.0% | |
| ACAACTGCATCATTCCTAGG+TGG | + | tig0030275:3707-3726 | None:intergenic | 45.0% | |
| TGCAAGAGATACTCATCTGG+GGG | - | tig0030275:3742-3761 | Msa1443000:CDS | 45.0% | |
| CTTCTGTTGTTCCTGTACCT+GGG | - | tig0030275:3825-3844 | Msa1443000:intron | 45.0% | |
| TGTGACTGCTGAAATGGTGT+TGG | + | tig0030275:3860-3879 | None:intergenic | 45.0% | |
| CAGCCATCTTTACAGTTTGG+CGG | - | tig0030275:3878-3897 | Msa1443000:intron | 45.0% | |
| !! | CAACAGCCGGTTTTTATTCC+AGG | - | tig0030275:3995-4014 | Msa1443000:CDS | 45.0% |
| CTCATCCAATGCACTCTCAT+GGG | - | tig0030275:4026-4045 | Msa1443000:CDS | 45.0% | |
| ! | ATCATCCCATGAGAGTGCAT+TGG | + | tig0030275:4034-4053 | None:intergenic | 45.0% |
| TCATCAGTTGCCCCATCAAA+TGG | - | tig0030275:4093-4112 | Msa1443000:CDS | 45.0% | |
| CATCAGTTGCCCCATCAAAT+GGG | - | tig0030275:4094-4113 | Msa1443000:CDS | 45.0% | |
| AAAATTTCCACCCTGCTGCT+GGG | + | tig0030275:4152-4171 | None:intergenic | 45.0% | |
| ! | CTTAGCTCTTCATGCGTTTC+AGG | + | tig0030275:4214-4233 | None:intergenic | 45.0% |
| CTGAAACGCATGAAGAGCTA+AGG | - | tig0030275:4212-4231 | Msa1443000:CDS | 45.0% | |
| AGGCTTGATAAAAGGGCAGA+TGG | - | tig0030275:4232-4251 | Msa1443000:CDS | 45.0% | |
| AGGGCAGATGGATATTCAGA+TGG | - | tig0030275:4244-4263 | Msa1443000:CDS | 45.0% | |
| GCAGATGGATATTCAGATGG+TGG | - | tig0030275:4247-4266 | Msa1443000:CDS | 45.0% | |
| !! | TATTCAGATGGTGGGTCATC+TGG | - | tig0030275:4256-4275 | Msa1443000:CDS | 45.0% |
| AGGACTGGAACTATATGAGC+CGG | + | tig0030275:4365-4384 | None:intergenic | 45.0% | |
| GTTAACGGAAGAGAACTAGG+AGG | + | tig0030275:4400-4419 | None:intergenic | 45.0% | |
| AATATCGGTGGCTGAGTGTT+GGG | + | tig0030275:4439-4458 | None:intergenic | 45.0% | |
| AAATATCGGTGGCTGAGTGT+TGG | + | tig0030275:4440-4459 | None:intergenic | 45.0% | |
| !! | GGAGTGCTGACTTTAGTAAC+GGG | + | tig0030275:4529-4548 | None:intergenic | 45.0% |
| GCTTCAGCAATGTGAGGAAT+AGG | + | tig0030275:4550-4569 | None:intergenic | 45.0% | |
| GTGACATCATCAGCTTCAAC+GGG | - | tig0030275:4604-4623 | Msa1443000:CDS | 45.0% | |
| TGACATCATCAGCTTCAACG+GGG | - | tig0030275:4605-4624 | Msa1443000:CDS | 45.0% | |
| GTAACAGCAGAAACACCACT+TGG | + | tig0030275:4649-4668 | None:intergenic | 45.0% | |
| TCAAAATCCCGAAACCTCCT+CGG | - | tig0030275:4705-4724 | Msa1443000:CDS | 45.0% | |
| AGAGATTTCCGAGGAGGTTT+CGG | + | tig0030275:4716-4735 | None:intergenic | 45.0% | |
| ATGCTGTGTAGAGATTTCCG+AGG | + | tig0030275:4725-4744 | None:intergenic | 45.0% | |
| GAAGAGTTGGACCTACTAAC+AGG | + | tig0030275:4904-4923 | None:intergenic | 45.0% | |
| GAGATTGCACAGAAACCTGT+AGG | + | tig0030275:5063-5082 | None:intergenic | 45.0% | |
| TTCTGTGCAATCTCCTACAG+TGG | - | tig0030275:5069-5088 | Msa1443000:CDS | 45.0% | |
| TGTTTCACTTCCTACAGGTG+TGG | + | tig0030275:5146-5165 | None:intergenic | 45.0% | |
| ATGTTCCATGGATACGGGTA+TGG | - | tig0030275:5419-5438 | Msa1443000:intron | 45.0% | |
| TAGTACCATACCCGTATCCA+TGG | + | tig0030275:5427-5446 | None:intergenic | 45.0% | |
| ATGGATACGGGTATGGTACT+AGG | - | tig0030275:5426-5445 | Msa1443000:intron | 45.0% | |
| GCAGATTCATCCTGTCCTTT+CGG | + | tig0030275:5679-5698 | None:intergenic | 45.0% | |
| GACAGGACAGATGATAGCTT+AGG | - | tig0030275:5715-5734 | Msa1443000:intron | 45.0% | |
| CTTGGTACCTGACACTGAAT+GGG | + | tig0030275:5919-5938 | None:intergenic | 45.0% | |
| ATAAAGCCGAACCTGATGAC+TGG | - | tig0030275:6195-6214 | Msa1443000:intron | 45.0% | |
| TAAAGCCGAACCTGATGACT+GGG | - | tig0030275:6196-6215 | Msa1443000:intron | 45.0% | |
| ! | CAGCAGGTTTTTGATGGAAG+TGG | - | tig0030275:6269-6288 | Msa1443000:CDS | 45.0% |
| AATTACGGCAGACATAGCTC+AGG | - | tig0030275:6370-6389 | Msa1443000:intron | 45.0% | |
| TCTACAGTTCTTCCAGGACT+AGG | + | tig0030275:6437-6456 | None:intergenic | 45.0% | |
| GAAGAACTGTAGACAGGTCA+AGG | - | tig0030275:6444-6463 | Msa1443000:intron | 45.0% | |
| AACTGTAGACAGGTCAAGGA+TGG | - | tig0030275:6448-6467 | Msa1443000:intron | 45.0% | |
| TTGTGGCTGAGGAAGACAAA+TGG | - | tig0030275:6486-6505 | Msa1443000:intron | 45.0% | |
| !!! | GGTGTTTTAAGGAATCCTCG+TGG | - | tig0030275:6590-6609 | Msa1443000:intron | 45.0% |
| TTTAAGGAATCCTCGTGGAC+CGG | - | tig0030275:6595-6614 | Msa1443000:intron | 45.0% | |
| TTTCTGGGCCAATGCAATCT+GGG | - | tig0030275:6645-6664 | Msa1443000:intron | 45.0% | |
| TGCAAAGAAATAGCCCTGAC+GGG | - | tig0030275:6684-6703 | Msa1443000:intron | 45.0% | |
| AAGGAATTAAACCCCTCTGC+TGG | + | tig0030275:6736-6755 | None:intergenic | 45.0% | |
| ATCATCTGTAAGGGAGACTG+GGG | + | tig0030275:6761-6780 | None:intergenic | 45.0% | |
| CATCATCTGTAAGGGAGACT+GGG | + | tig0030275:6762-6781 | None:intergenic | 45.0% | |
| TCCCTTACAGATGATGCACA+AGG | - | tig0030275:6766-6785 | Msa1443000:intron | 45.0% | |
| GCCTTGTGCATCATCTGTAA+GGG | + | tig0030275:6770-6789 | None:intergenic | 45.0% | |
| ! | AGCCTTGTGCATCATCTGTA+AGG | + | tig0030275:6771-6790 | None:intergenic | 45.0% |
| ! | AATCTTCGAGAAGGCTCTGA+TGG | - | tig0030275:6958-6977 | Msa1443000:intron | 45.0% |
| TCGTTGTCCACACTCAAATC+AGG | + | tig0030275:7040-7059 | None:intergenic | 45.0% | |
| AATGCCAGGAGGAATTTGAG+AGG | - | tig0030275:7092-7111 | Msa1443000:intron | 45.0% | |
| ATGCCAGGAGGAATTTGAGA+GGG | - | tig0030275:7093-7112 | Msa1443000:intron | 45.0% | |
| GGGTGAAAGAGAACAAGAAG+AGG | - | tig0030275:7114-7133 | Msa1443000:intron | 45.0% | |
| !! | AAATAAGGTTGATGAGGCCG+AGG | - | tig0030275:7138-7157 | Msa1443000:intron | 45.0% |
| !! | AATAAGGTTGATGAGGCCGA+GGG | - | tig0030275:7139-7158 | Msa1443000:intron | 45.0% |
| AGAGAAGAACCAAGGCAAGA+AGG | - | tig0030275:7194-7213 | Msa1443000:intron | 45.0% | |
| GAAGTTACTAGGTCAGTGTC+AGG | - | tig0030275:7300-7319 | Msa1443000:intron | 45.0% | |
| TCCTGATGAGGAAGATGTTG+AGG | - | tig0030275:7324-7343 | Msa1443000:intron | 45.0% | |
| GATTGACCATCCCAAAGCTA+AGG | - | tig0030275:7381-7400 | Msa1443000:intron | 45.0% | |
| !! | TCAAGCACAAGTTGGTAGGA+TGG | - | tig0030275:7590-7609 | Msa1443000:CDS | 45.0% |
| !! | CAAGCACAAGTTGGTAGGAT+GGG | - | tig0030275:7591-7610 | Msa1443000:CDS | 45.0% |
| ! | AGAAGGAACCCCATGGATTT+TGG | - | tig0030275:7642-7661 | Msa1443000:CDS | 45.0% |
| !! | CTCTAGGACCAAAATCCATG+GGG | + | tig0030275:7653-7672 | None:intergenic | 45.0% |
| !! | CCTCTAGGACCAAAATCCAT+GGG | + | tig0030275:7654-7673 | None:intergenic | 45.0% |
| !! | TCCTCTAGGACCAAAATCCA+TGG | + | tig0030275:7655-7674 | None:intergenic | 45.0% |
| GACAACATAGGTGATCCTCT+AGG | + | tig0030275:7669-7688 | None:intergenic | 45.0% | |
| GGAGAAGTAGGAGACAACAT+AGG | + | tig0030275:7681-7700 | None:intergenic | 45.0% | |
| GTTGTCTCCTACTTCTCCAA+TGG | - | tig0030275:7683-7702 | Msa1443000:exon | 45.0% | |
| TCATTACCCAAGGGTCTTTG+AGG | + | tig0030275:7813-7832 | None:intergenic | 45.0% | |
| TCTATAACATTGGGACCCCA+AGG | - | tig0030275:7834-7853 | Msa1443000:intron | 45.0% | |
| TGAATTTGTCGGTCCTCTAC+TGG | + | tig0030275:7880-7899 | None:intergenic | 45.0% | |
| TTATCTGAGCGCACATCGTA+TGG | - | tig0030275:7978-7997 | Msa1443000:five_prime_UTR | 45.0% | |
| TCATATCCAGCTGGACTTGA+AGG | + | tig0030275:8044-8063 | None:intergenic | 45.0% | |
| GTACTCTCTGATTGCTGACA+AGG | + | tig0030275:8228-8247 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTAATTTTCTTTTT+TGG | + | tig0030275:5323-5342 | None:intergenic | 5.0% |
| !! | AAATTAAAAAAAATTAAATG+TGG | - | tig0030275:5330-5349 | Msa1443000:intron | 5.0% |
| TACTGAGAGAGAGAGAGAGG+GGG | + | tig0030275:876-895 | None:intergenic | 50.0% | |
| GTACTGAGAGAGAGAGAGAG+GGG | + | tig0030275:877-896 | None:intergenic | 50.0% | |
| ! | CAGTACTGAGAGAGAGAGAG+AGG | + | tig0030275:879-898 | None:intergenic | 50.0% |
| TTAGAGGAGAGTGACGAAGC+CGG | + | tig0030275:1304-1323 | None:intergenic | 50.0% | |
| CGTCACTCTCCTCTAATAGG+AGG | - | tig0030275:1308-1327 | Msa1443000:CDS | 50.0% | |
| ! | GACTCGAATGAGCGAGTTGA+AGG | - | tig0030275:1610-1629 | Msa1443000:CDS | 50.0% |
| ! | CGAGCAGCGTAAGTACTGTT+TGG | + | tig0030275:2597-2616 | None:intergenic | 50.0% |
| CATGTACAACCGCAGATGCA+TGG | - | tig0030275:2636-2655 | Msa1443000:CDS | 50.0% | |
| !! | GGTAGGATAGGAGCATCTGA+TGG | - | tig0030275:2869-2888 | Msa1443000:CDS | 50.0% |
| CTGAATCAACAGCTGCACAG+AGG | - | tig0030275:2909-2928 | Msa1443000:CDS | 50.0% | |
| CTTAGCAGGGCTTGTAGGAA+CGG | + | tig0030275:2996-3015 | None:intergenic | 50.0% | |
| GTTCCTACAAGCCCTGCTAA+GGG | - | tig0030275:2995-3014 | Msa1443000:CDS | 50.0% | |
| ATACCCTTAGCAGGGCTTGT+AGG | + | tig0030275:3001-3020 | None:intergenic | 50.0% | |
| !! | TCCTGGTGTTATGAATGGGG+TGG | - | tig0030275:3213-3232 | Msa1443000:intron | 50.0% |
| ! | AGATGAGCAGAAGCGTGATC+AGG | - | tig0030275:3366-3385 | Msa1443000:intron | 50.0% |
| CTACTTCCCAATGCTTCCGA+AGG | - | tig0030275:3460-3479 | Msa1443000:intron | 50.0% | |
| AGATACTCATCTGGGGGCTA+AGG | - | tig0030275:3748-3767 | Msa1443000:CDS | 50.0% | |
| TCTGGGGGCTAAGGCTAAAA+AGG | - | tig0030275:3757-3776 | Msa1443000:CDS | 50.0% | |
| CCAGGTACAGGAACAACAGA+AGG | + | tig0030275:3827-3846 | None:intergenic | 50.0% | |
| CCTTCTGTTGTTCCTGTACC+TGG | - | tig0030275:3824-3843 | Msa1443000:intron | 50.0% | |
| GATGGCTGTGACTGCTGAAA+TGG | + | tig0030275:3866-3885 | None:intergenic | 50.0% | |
| GGACCGCCAAACTGTAAAGA+TGG | + | tig0030275:3884-3903 | None:intergenic | 50.0% | |
| TGTTGGACAAGTGCAACAGC+CGG | - | tig0030275:3982-4001 | Msa1443000:CDS | 50.0% | |
| ATTGGATGAGGCTGAAGACC+TGG | + | tig0030275:4016-4035 | None:intergenic | 50.0% | |
| ! | CCATGAGAGTGCATTGGATG+AGG | + | tig0030275:4028-4047 | None:intergenic | 50.0% |
| CCTCATCCAATGCACTCTCA+TGG | - | tig0030275:4025-4044 | Msa1443000:CDS | 50.0% | |
| CCCATGTTGCCCATTTGATG+GGG | + | tig0030275:4106-4125 | None:intergenic | 50.0% | |
| CCCCATCAAATGGGCAACAT+GGG | - | tig0030275:4103-4122 | Msa1443000:CDS | 50.0% | |
| GCCCATGTTGCCCATTTGAT+GGG | + | tig0030275:4107-4126 | None:intergenic | 50.0% | |
| TGCCCATGTTGCCCATTTGA+TGG | + | tig0030275:4108-4127 | None:intergenic | 50.0% | |
| CAAATGGGCAACATGGGCAT+TGG | - | tig0030275:4109-4128 | Msa1443000:CDS | 50.0% | |
| AAATTTCCACCCTGCTGCTG+GGG | + | tig0030275:4151-4170 | None:intergenic | 50.0% | |
| CAAAATTTCCACCCTGCTGC+TGG | + | tig0030275:4153-4172 | None:intergenic | 50.0% | |
| ! | GCAGCAGGGTGGAAATTTTG+CGG | - | tig0030275:4153-4172 | Msa1443000:CDS | 50.0% |
| ! | CAGCAGGGTGGAAATTTTGC+GGG | - | tig0030275:4154-4173 | Msa1443000:CDS | 50.0% |
| CTGGAACTATATGAGCCGGA+AGG | + | tig0030275:4361-4380 | None:intergenic | 50.0% | |
| AGGTGGATAATAGGGAGGAC+TGG | + | tig0030275:4380-4399 | None:intergenic | 50.0% | |
| CTAGGAGGTGGATAATAGGG+AGG | + | tig0030275:4385-4404 | None:intergenic | 50.0% | |
| AACGGAAGAGAACTAGGAGG+TGG | + | tig0030275:4397-4416 | None:intergenic | 50.0% | |
| !! | GCTGAGTGTTGGGAGTTATC+TGG | + | tig0030275:4429-4448 | None:intergenic | 50.0% |
| TCACGAGAACGTTCTGCAGT+GGG | + | tig0030275:4574-4593 | None:intergenic | 50.0% | |
| TTCACGAGAACGTTCTGCAG+TGG | + | tig0030275:4575-4594 | None:intergenic | 50.0% | |
| GACATCATCAGCTTCAACGG+GGG | - | tig0030275:4606-4625 | Msa1443000:CDS | 50.0% | |
| GAGATTTCCGAGGAGGTTTC+GGG | + | tig0030275:4715-4734 | None:intergenic | 50.0% | |
| CTGTGTAGAGATTTCCGAGG+AGG | + | tig0030275:4722-4741 | None:intergenic | 50.0% | |
| ACCTACATCAGCTGTGACTG+TGG | - | tig0030275:4834-4853 | Msa1443000:CDS | 50.0% | |
| TCCACAGTCACAGCTGATGT+AGG | + | tig0030275:4838-4857 | None:intergenic | 50.0% | |
| ACTAACAGGTTCCCTCGTGT+TGG | + | tig0030275:4890-4909 | None:intergenic | 50.0% | |
| ACACGAGGGAACCTGTTAGT+AGG | - | tig0030275:4890-4909 | Msa1443000:CDS | 50.0% | |
| GACTGCATACTAGCCACTGT+AGG | + | tig0030275:5085-5104 | None:intergenic | 50.0% | |
| TCGATGTCCCATTCAGTGTC+AGG | - | tig0030275:5909-5928 | Msa1443000:CDS | 50.0% | |
| CCTTGGTACCTGACACTGAA+TGG | + | tig0030275:5920-5939 | None:intergenic | 50.0% | |
| CCATTCAGTGTCAGGTACCA+AGG | - | tig0030275:5917-5936 | Msa1443000:CDS | 50.0% | |
| GGTGCAGTAAGCGAGAAAAG+TGG | - | tig0030275:6167-6186 | Msa1443000:intron | 50.0% | |
| ATCCTCCCAGTCATCAGGTT+CGG | + | tig0030275:6204-6223 | None:intergenic | 50.0% | |
| CGTGATTCACATCCTAGTCC+TGG | - | tig0030275:6422-6441 | Msa1443000:intron | 50.0% | |
| GTCCTGGAAGAACTGTAGAC+AGG | - | tig0030275:6438-6457 | Msa1443000:intron | 50.0% | |
| GACCTGTCTACAGTTCTTCC+AGG | + | tig0030275:6443-6462 | None:intergenic | 50.0% | |
| ! | AATTCTGGGCGTGGTTTGGA+TGG | - | tig0030275:6530-6549 | Msa1443000:intron | 50.0% |
| !! | GGTAGTGGTGGATTTCGACA+TGG | - | tig0030275:6551-6570 | Msa1443000:intron | 50.0% |
| ! | CATGGCCAAGGAGGCAATTT+TGG | - | tig0030275:6569-6588 | Msa1443000:intron | 50.0% |
| ATCGCCCCACCATATTGGAT+GGG | + | tig0030275:6623-6642 | None:intergenic | 50.0% | |
| AAAGGATCGCCCCACCATAT+TGG | + | tig0030275:6628-6647 | None:intergenic | 50.0% | |
| ! | CAGATTGCATTGGCCCAGAA+AGG | + | tig0030275:6646-6665 | None:intergenic | 50.0% |
| CTTTCTGGGCCAATGCAATC+TGG | - | tig0030275:6644-6663 | Msa1443000:intron | 50.0% | |
| TTCTGGGCCAATGCAATCTG+GGG | - | tig0030275:6646-6665 | Msa1443000:intron | 50.0% | |
| TGATGTGCCCCAGATTGCAT+TGG | + | tig0030275:6656-6675 | None:intergenic | 50.0% | |
| ! | AATGCAATCTGGGGCACATC+AGG | - | tig0030275:6655-6674 | Msa1443000:intron | 50.0% |
| ! | ATGCAATCTGGGGCACATCA+GGG | - | tig0030275:6656-6675 | Msa1443000:intron | 50.0% |
| GCAAAGAAATAGCCCTGACG+GGG | - | tig0030275:6685-6704 | Msa1443000:intron | 50.0% | |
| ! | TTCTGCTAGCTTCCAGCAGA+GGG | - | tig0030275:6721-6740 | Msa1443000:intron | 50.0% |
| GCATCATCTGTAAGGGAGAC+TGG | + | tig0030275:6763-6782 | None:intergenic | 50.0% | |
| ATGCAGAAGAGGCAAAGCAG+AGG | - | tig0030275:6822-6841 | Msa1443000:intron | 50.0% | |
| GACAACGCAATCACTCTCAC+TGG | - | tig0030275:6923-6942 | Msa1443000:intron | 50.0% | |
| TGCCAACTTCTGCTCACATC+TGG | - | tig0030275:7003-7022 | Msa1443000:intron | 50.0% | |
| AGCCAGATGTGAGCAGAAGT+TGG | + | tig0030275:7008-7027 | None:intergenic | 50.0% | |
| TGCCAGGAGGAATTTGAGAG+GGG | - | tig0030275:7094-7113 | Msa1443000:intron | 50.0% | |
| TGACAGTTTGACCTCACCCT+CGG | + | tig0030275:7158-7177 | None:intergenic | 50.0% | |
| AAGGGAGCAGAGAAGAACCA+AGG | - | tig0030275:7186-7205 | Msa1443000:intron | 50.0% | |
| TAACATGCGCCTTCTTGCCT+TGG | + | tig0030275:7206-7225 | None:intergenic | 50.0% | |
| ! | AAGGCAAGAAGGCGCATGTT+AGG | - | tig0030275:7205-7224 | Msa1443000:intron | 50.0% |
| TCAGTGTCAGGATCCTGATG+AGG | - | tig0030275:7312-7331 | Msa1443000:intron | 50.0% | |
| GCCTCAACATCTTCCTCATC+AGG | + | tig0030275:7328-7347 | None:intergenic | 50.0% | |
| ACAGAGATGCTGTGCAAGAG+AGG | - | tig0030275:7562-7581 | Msa1443000:CDS | 50.0% | |
| !! | AGGCTCAAGCACAAGTTGGT+AGG | - | tig0030275:7586-7605 | Msa1443000:CDS | 50.0% |
| ATCTGCAAGAAGGAACCCCA+TGG | - | tig0030275:7635-7654 | Msa1443000:CDS | 50.0% | |
| !! | CCCATGGATTTTGGTCCTAG+AGG | - | tig0030275:7651-7670 | Msa1443000:CDS | 50.0% |
| TCTCCTACTTCTCCAATGGG+TGG | - | tig0030275:7687-7706 | Msa1443000:exon | 50.0% | |
| ATAACATTGGGACCCCAAGG+TGG | - | tig0030275:7837-7856 | Msa1443000:intron | 50.0% | |
| GCATTCTGTGAGAGTCTCCA+GGG | + | tig0030275:7932-7951 | None:intergenic | 50.0% | |
| GACTCTCACAGAATGCCTAG+CGG | - | tig0030275:7936-7955 | Msa1443000:five_prime_UTR | 50.0% | |
| AGCGCACATCGTATGGCAAT+AGG | - | tig0030275:7985-8004 | Msa1443000:five_prime_UTR | 50.0% | |
| GCGCACATCGTATGGCAATA+GGG | - | tig0030275:7986-8005 | Msa1443000:five_prime_UTR | 50.0% | |
| CACATCGTATGGCAATAGGG+AGG | - | tig0030275:7989-8008 | Msa1443000:five_prime_UTR | 50.0% | |
| TGAGAGACAATTGGCCCTTG+CGG | + | tig0030275:8170-8189 | None:intergenic | 50.0% | |
| ACTGAGAGAGAGAGAGAGGG+GGG | + | tig0030275:875-894 | None:intergenic | 55.0% | |
| AATCAGCAGAGAGGTCCCTC+AGG | - | tig0030275:1247-1266 | Msa1443000:CDS | 55.0% | |
| TCCCTCAGGTGGTCATGGAA+GGG | - | tig0030275:1261-1280 | Msa1443000:CDS | 55.0% | |
| GTCATTGTGGTGTGTCCACG+TGG | - | tig0030275:1867-1886 | Msa1443000:CDS | 55.0% | |
| GCTGCTCGGACCATGCATAA+CGG | - | tig0030275:2609-2628 | Msa1443000:CDS | 55.0% | |
| !! | GATAGGAGCATCTGATGGGC+CGG | - | tig0030275:2874-2893 | Msa1443000:CDS | 55.0% |
| ! | ATCTGATGGGCCGGTTGCAA+AGG | - | tig0030275:2883-2902 | Msa1443000:CDS | 55.0% |
| ! | GTTGGTTCAGAGCTCACAGG+GGG | + | tig0030275:2974-2993 | None:intergenic | 55.0% |
| ! | GGTTGGTTCAGAGCTCACAG+GGG | + | tig0030275:2975-2994 | None:intergenic | 55.0% |
| ! | CGGTTGGTTCAGAGCTCACA+GGG | + | tig0030275:2976-2995 | None:intergenic | 55.0% |
| ! | ACGGTTGGTTCAGAGCTCAC+AGG | + | tig0030275:2977-2996 | None:intergenic | 55.0% |
| CGTTCCTACAAGCCCTGCTA+AGG | - | tig0030275:2994-3013 | Msa1443000:CDS | 55.0% | |
| GCCACCCCATTCATAACACC+AGG | + | tig0030275:3217-3236 | None:intergenic | 55.0% | |
| ! | AGGGATTGGCACTGAAGGCA+CGG | + | tig0030275:3663-3682 | None:intergenic | 55.0% |
| ! | GCAGTAGGGATTGGCACTGA+AGG | + | tig0030275:3668-3687 | None:intergenic | 55.0% |
| TGCTTCGGAGCAGTAGGGAT+TGG | + | tig0030275:3677-3696 | None:intergenic | 55.0% | |
| GGTGTCAAAGCTGGCAACTG+GGG | + | tig0030275:3785-3804 | None:intergenic | 55.0% | |
| ! | CGGTGTCAAAGCTGGCAACT+GGG | + | tig0030275:3786-3805 | None:intergenic | 55.0% |
| ! | CCAGTTGCCAGCTTTGACAC+CGG | - | tig0030275:3784-3803 | Msa1443000:intron | 55.0% |
| CAACAGAAGGCCTCTGCATC+TGG | + | tig0030275:3814-3833 | None:intergenic | 55.0% | |
| ! | GGCATTGAAAGCCCAGGTAC+AGG | + | tig0030275:3839-3858 | None:intergenic | 55.0% |
| !! | GGTGTTGGCATTGAAAGCCC+AGG | + | tig0030275:3845-3864 | None:intergenic | 55.0% |
| GCCCCATCAAATGGGCAACA+TGG | - | tig0030275:4102-4121 | Msa1443000:CDS | 55.0% | |
| !! | ATGGTGGGTCATCTGGTGCT+AGG | - | tig0030275:4263-4282 | Msa1443000:CDS | 55.0% |
| CGAAGGCTGAGAAGCAGCAA+TGG | + | tig0030275:4329-4348 | None:intergenic | 55.0% | |
| GTGGGAGCTTCAGCAATGTG+AGG | + | tig0030275:4556-4575 | None:intergenic | 55.0% | |
| ACTGGGGTTTCCACACCTGT+AGG | - | tig0030275:5133-5152 | Msa1443000:CDS | 55.0% | |
| CTCCAGAAAGCAGATGCTGC+CGG | - | tig0030275:6008-6027 | Msa1443000:intron | 55.0% | |
| TCCAGAAAGCAGATGCTGCC+GGG | - | tig0030275:6009-6028 | Msa1443000:intron | 55.0% | |
| AGGTCAAGGATGGAACACCG+TGG | - | tig0030275:6458-6477 | Msa1443000:intron | 55.0% | |
| GGTCAAGGATGGAACACCGT+GGG | - | tig0030275:6459-6478 | Msa1443000:intron | 55.0% | |
| GGAACACCGTGGGAATGTTG+TGG | - | tig0030275:6469-6488 | Msa1443000:intron | 55.0% | |
| CCTCAGCCACAACATTCCCA+CGG | + | tig0030275:6478-6497 | None:intergenic | 55.0% | |
| !! | CGTGGTTTGGATGGTAGTGG+TGG | - | tig0030275:6539-6558 | Msa1443000:intron | 55.0% |
| ! | GGTGGATTTCGACATGGCCA+AGG | - | tig0030275:6557-6576 | Msa1443000:intron | 55.0% |
| GGATTTCGACATGGCCAAGG+AGG | - | tig0030275:6560-6579 | Msa1443000:intron | 55.0% | |
| CCACCATATTGGATGGGTGC+CGG | + | tig0030275:6617-6636 | None:intergenic | 55.0% | |
| CGGCACCCATCCAATATGGT+GGG | - | tig0030275:6615-6634 | Msa1443000:intron | 55.0% | |
| GGCACCCATCCAATATGGTG+GGG | - | tig0030275:6616-6635 | Msa1443000:intron | 55.0% | |
| GATCGCCCCACCATATTGGA+TGG | + | tig0030275:6624-6643 | None:intergenic | 55.0% | |
| ! | TATGGTGGGGCGATCCTTTC+TGG | - | tig0030275:6629-6648 | Msa1443000:intron | 55.0% |
| ! | ATGGTGGGGCGATCCTTTCT+GGG | - | tig0030275:6630-6649 | Msa1443000:intron | 55.0% |
| ! | GTTCTGCTAGCTTCCAGCAG+AGG | - | tig0030275:6720-6739 | Msa1443000:intron | 55.0% |
| ! | TCTGCTAGCTTCCAGCAGAG+GGG | - | tig0030275:6722-6741 | Msa1443000:intron | 55.0% |
| TGTAAGGGAGACTGGGGAGA+AGG | + | tig0030275:6755-6774 | None:intergenic | 55.0% | |
| CACCCCTCTCAAATTCCTCC+TGG | + | tig0030275:7099-7118 | None:intergenic | 55.0% | |
| AGATGCTGTGCAAGAGAGGC+AGG | - | tig0030275:7566-7585 | Msa1443000:CDS | 55.0% | |
| AGGCAGGCTCAAGCACAAGT+TGG | - | tig0030275:7582-7601 | Msa1443000:CDS | 55.0% | |
| !! | CAAGTTGGTAGGATGGGTCG+TGG | - | tig0030275:7597-7616 | Msa1443000:CDS | 55.0% |
| TGGTAGGATGGGTCGTGGTA+TGG | - | tig0030275:7602-7621 | Msa1443000:CDS | 55.0% | |
| GGTAGGATGGGTCGTGGTAT+GGG | - | tig0030275:7603-7622 | Msa1443000:CDS | 55.0% | |
| GGTCCACCCATTGGAGAAGT+AGG | + | tig0030275:7693-7712 | None:intergenic | 55.0% | |
| GTTTGAGTAGACAGCCCACG+CGG | + | tig0030275:7714-7733 | None:intergenic | 55.0% | |
| GGGCTGTCTACTCAAACACG+TGG | - | tig0030275:7717-7736 | Msa1443000:five_prime_UTR | 55.0% | |
| ! | ACCCCAAGGTGGTCTTGCTA+GGG | - | tig0030275:7848-7867 | Msa1443000:intron | 55.0% |
| TCCCCTAGCAAGACCACCTT+GGG | + | tig0030275:7853-7872 | None:intergenic | 55.0% | |
| TTCCCCTAGCAAGACCACCT+TGG | + | tig0030275:7854-7873 | None:intergenic | 55.0% | |
| GCTAGGGGAATGTCCAGTAG+AGG | - | tig0030275:7864-7883 | Msa1443000:intron | 55.0% | |
| GGCATTCTGTGAGAGTCTCC+AGG | + | tig0030275:7933-7952 | None:intergenic | 55.0% | |
| GACAGACCTTCAAGTCCAGC+TGG | - | tig0030275:8035-8054 | Msa1443000:five_prime_UTR | 55.0% | |
| GCGTGAGGTGATGTTGCAAC+AGG | + | tig0030275:8143-8162 | None:intergenic | 55.0% | |
| AGAGAGAGAGGGGGGAGAGA+GGG | + | tig0030275:867-886 | None:intergenic | 60.0% | |
| AGAGGTCCCTCAGGTGGTCA+TGG | - | tig0030275:1256-1275 | Msa1443000:CDS | 60.0% | |
| GTCCCTCAGGTGGTCATGGA+AGG | - | tig0030275:1260-1279 | Msa1443000:CDS | 60.0% | |
| CCCCTTCCATGACCACCTGA+GGG | + | tig0030275:1265-1284 | None:intergenic | 60.0% | |
| CCCTCAGGTGGTCATGGAAG+GGG | - | tig0030275:1262-1281 | Msa1443000:CDS | 60.0% | |
| ACAGGGGGCGGTTGAGAAGT+TGG | + | tig0030275:2959-2978 | None:intergenic | 60.0% | |
| GCAGGGCTTGTAGGAACGGT+TGG | + | tig0030275:2992-3011 | None:intergenic | 60.0% | |
| GGAGCTGAGCTTGTACGAGC+AGG | + | tig0030275:3337-3356 | None:intergenic | 60.0% | |
| ! | GGGATTGGCACTGAAGGCAC+GGG | + | tig0030275:3662-3681 | None:intergenic | 60.0% |
| ! | GCTGCTGCTTCGGAGCAGTA+GGG | + | tig0030275:3682-3701 | None:intergenic | 60.0% |
| ! | TGCTGCTGCTTCGGAGCAGT+AGG | + | tig0030275:3683-3702 | None:intergenic | 60.0% |
| ! | CTAGGTGGCTGCTGCTGCTT+CGG | + | tig0030275:3692-3711 | None:intergenic | 60.0% |
| ! | CCGGTGTCAAAGCTGGCAAC+TGG | + | tig0030275:3787-3806 | None:intergenic | 60.0% |
| ! | TGGCTTGCCGGTGTCAAAGC+TGG | + | tig0030275:3794-3813 | None:intergenic | 60.0% |
| !! | GGCAACATGGGCATTGGCAC+CGG | - | tig0030275:4115-4134 | Msa1443000:CDS | 60.0% |
| CCTGCTGCTGGGGATATGGA+GGG | + | tig0030275:4141-4160 | None:intergenic | 60.0% | |
| CCTCCATATCCCCAGCAGCA+GGG | - | tig0030275:4139-4158 | Msa1443000:CDS | 60.0% | |
| TCCCGGCAGCATCTGCTTTC+TGG | + | tig0030275:6013-6032 | None:intergenic | 60.0% | |
| AGCCGAACCTGATGACTGGG+AGG | - | tig0030275:6199-6218 | Msa1443000:intron | 60.0% | |
| GCTGCATCCTCCCAGTCATC+AGG | + | tig0030275:6209-6228 | None:intergenic | 60.0% | |
| CCGTGGGAATGTTGTGGCTG+AGG | - | tig0030275:6475-6494 | Msa1443000:intron | 60.0% | |
| ! | GGGCGTGGTTTGGATGGTAG+TGG | - | tig0030275:6536-6555 | Msa1443000:intron | 60.0% |
| GGACCGGCACCCATCCAATA+TGG | - | tig0030275:6611-6630 | Msa1443000:intron | 60.0% | |
| CCGGCACCCATCCAATATGG+TGG | - | tig0030275:6614-6633 | Msa1443000:intron | 60.0% | |
| ! | CAATCTGGGGCACATCAGGG+TGG | - | tig0030275:6659-6678 | Msa1443000:intron | 60.0% |
| GAAATAGCCCTGACGGGGAG+AGG | - | tig0030275:6690-6709 | Msa1443000:intron | 60.0% | |
| ! | GACCCCAAGGTGGTCTTGCT+AGG | - | tig0030275:7847-7866 | Msa1443000:intron | 60.0% |
| CCCCTAGCAAGACCACCTTG+GGG | + | tig0030275:7852-7871 | None:intergenic | 60.0% | |
| ! | CCCCAAGGTGGTCTTGCTAG+GGG | - | tig0030275:7849-7868 | Msa1443000:intron | 60.0% |
| CCAGGGCCAGAATGCACATC+AGG | + | tig0030275:7915-7934 | None:intergenic | 60.0% | |
| CCTGATGTGCATTCTGGCCC+TGG | - | tig0030275:7912-7931 | Msa1443000:intron | 60.0% | |
| AGAGAGGGGGGAGAGAGGGA+GGG | + | tig0030275:863-882 | None:intergenic | 65.0% | |
| GAGAGAGAGAGGGGGGAGAG+AGG | + | tig0030275:868-887 | None:intergenic | 65.0% | |
| CAGCAGAGAGGTCCCTCAGG+TGG | - | tig0030275:1250-1269 | Msa1443000:CDS | 65.0% | |
| GCCCCTTCCATGACCACCTG+AGG | + | tig0030275:1266-1285 | None:intergenic | 65.0% | |
| GGTGGTCATGGAAGGGGCAG+CGG | - | tig0030275:1268-1287 | Msa1443000:CDS | 65.0% | |
| AGAGTGACGAAGCCGGTGCG+CGG | + | tig0030275:1297-1316 | None:intergenic | 65.0% | |
| GGTTCAGAGCTCACAGGGGG+CGG | + | tig0030275:2971-2990 | None:intergenic | 65.0% | |
| CGAAGCAGCAGCAGCCACCT+AGG | - | tig0030275:3690-3709 | Msa1443000:CDS | 65.0% | |
| CACCGGCAAGCCAGATGCAG+AGG | - | tig0030275:3801-3820 | Msa1443000:intron | 65.0% | |
| ! | GGCCTCTGCATCTGGCTTGC+CGG | + | tig0030275:3806-3825 | None:intergenic | 65.0% |
| CTGCTGGGGATATGGAGGGC+CGG | + | tig0030275:4137-4156 | None:intergenic | 65.0% | |
| CCCTCCATATCCCCAGCAGC+AGG | - | tig0030275:4138-4157 | Msa1443000:CDS | 65.0% | |
| CCCTGCTGCTGGGGATATGG+AGG | + | tig0030275:4142-4161 | None:intergenic | 65.0% | |
| CCACCCTGCTGCTGGGGATA+TGG | + | tig0030275:4145-4164 | None:intergenic | 65.0% | |
| CCATATCCCCAGCAGCAGGG+TGG | - | tig0030275:4142-4161 | Msa1443000:CDS | 65.0% | |
| ATAGCCCTGACGGGGAGAGG+TGG | - | tig0030275:6693-6712 | Msa1443000:intron | 65.0% | |
| GTTGCCACCTCTCCCCGTCA+GGG | + | tig0030275:6700-6719 | None:intergenic | 65.0% | |
| !! | GGTTGATGAGGCCGAGGGTG+AGG | - | tig0030275:7144-7163 | Msa1443000:intron | 65.0% |
| TCTCCAATGGGTGGACCGCG+TGG | - | tig0030275:7696-7715 | Msa1443000:five_prime_UTR | 65.0% | |
| CTCCAATGGGTGGACCGCGT+GGG | - | tig0030275:7697-7716 | Msa1443000:five_prime_UTR | 65.0% | |
| TCACCTCACGCTCAGCCGCA+AGG | - | tig0030275:8152-8171 | Msa1443000:five_prime_UTR | 65.0% | |
| CACCTCACGCTCAGCCGCAA+GGG | - | tig0030275:8153-8172 | Msa1443000:five_prime_UTR | 65.0% | |
| AGGGGGGAGAGAGGGAGGGA+GGG | + | tig0030275:859-878 | None:intergenic | 70.0% | |
| GAGAGAGGGGGGAGAGAGGG+AGG | + | tig0030275:864-883 | None:intergenic | 70.0% | |
| GGTCATGGAAGGGGCAGCGG+TGG | - | tig0030275:1271-1290 | Msa1443000:CDS | 70.0% | |
| !! | TGGATGGGTGCCGGTCCACG+AGG | + | tig0030275:6608-6627 | None:intergenic | 70.0% |
| CGTTGCCACCTCTCCCCGTC+AGG | + | tig0030275:6701-6720 | None:intergenic | 70.0% | |
| AGCCCACGCGGTCCACCCAT+TGG | + | tig0030275:7702-7721 | None:intergenic | 70.0% | |
| GGGGGGAGAGAGGGAGGGAG+GGG | + | tig0030275:858-877 | None:intergenic | 75.0% | |
| GAGGGGGGAGAGAGGGAGGG+AGG | + | tig0030275:860-879 | None:intergenic | 75.0% | |
| GGCCCTTGCGGCTGAGCGTG+AGG | + | tig0030275:8158-8177 | None:intergenic | 75.0% | |
| ! | GGGCAGCGGTGGCCGCGCAC+CGG | - | tig0030275:1282-1301 | Msa1443000:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030275 | gene | 611 | 8252 | 611 | ID=Msa1443000;Name=Msa1443000 |
| tig0030275 | mRNA | 611 | 8252 | 611 | ID=Msa1443000-mRNA-1;Parent=Msa1443000;Name=Msa1443000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=428|1|1|1|0.87|0.77|9|412|1371 |
| tig0030275 | exon | 611 | 3031 | 611 | ID=Msa1443000-mRNA-1:exon:13686;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 3583 | 3796 | 3583 | ID=Msa1443000-mRNA-1:exon:13685;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 3888 | 5225 | 3888 | ID=Msa1443000-mRNA-1:exon:13684;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 5476 | 5532 | 5476 | ID=Msa1443000-mRNA-1:exon:13683;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 5626 | 5693 | 5626 | ID=Msa1443000-mRNA-1:exon:13682;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 5847 | 5984 | 5847 | ID=Msa1443000-mRNA-1:exon:13681;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 6206 | 6342 | 6206 | ID=Msa1443000-mRNA-1:exon:13680;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 7534 | 7786 | 7534 | ID=Msa1443000-mRNA-1:exon:13679;Parent=Msa1443000-mRNA-1 |
| tig0030275 | exon | 7923 | 8252 | 7923 | ID=Msa1443000-mRNA-1:exon:13678;Parent=Msa1443000-mRNA-1 |
| tig0030275 | five_prime_UTR | 7923 | 8252 | 7923 | ID=Msa1443000-mRNA-1:five_prime_utr;Parent=Msa1443000-mRNA-1 |
| tig0030275 | five_prime_UTR | 7689 | 7786 | 7689 | ID=Msa1443000-mRNA-1:five_prime_utr;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 7534 | 7688 | 7534 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 6206 | 6342 | 6206 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 5847 | 5984 | 5847 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 5626 | 5693 | 5626 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 5476 | 5532 | 5476 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 3888 | 5225 | 3888 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 3583 | 3796 | 3583 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | CDS | 1023 | 3031 | 1023 | ID=Msa1443000-mRNA-1:cds;Parent=Msa1443000-mRNA-1 |
| tig0030275 | three_prime_UTR | 611 | 1022 | 611 | ID=Msa1443000-mRNA-1:three_prime_utr;Parent=Msa1443000-mRNA-1 |
| Gene Sequence |
| Protein sequence |