Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446450 | sp|Q9SZ83|Y4967_ARATH | 58.357 | 353 | 147 | 0 | 9 | 361 | 7 | 359 | 5.68e-156 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446450 | B7FJM8 | 94.766 | 363 | 19 | 0 | 1 | 363 | 1 | 363 | 0.0 | 724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0986490 | Msa1446450 | 0.869666 | 2.609078e-66 | -8.615850e-47 |
| Msa0909620 | Msa1446450 | 0.852126 | 5.662855e-61 | -8.615850e-47 |
| Msa0946710 | Msa1446450 | 0.973322 | 3.122714e-136 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446450 | MtrunA17_Chr6g0464971 | 94.766 | 363 | 19 | 0 | 1 | 363 | 1 | 363 | 0.0 | 724 |
| Msa1446450 | MtrunA17_Chr6g0464961 | 88.981 | 363 | 40 | 0 | 1 | 363 | 23 | 385 | 0.0 | 658 |
| Msa1446450 | MtrunA17_Chr6g0465111 | 62.570 | 358 | 134 | 0 | 5 | 362 | 3 | 360 | 1.45e-173 | 487 |
| Msa1446450 | MtrunA17_Chr6g0465121 | 60.894 | 358 | 135 | 1 | 5 | 362 | 16 | 368 | 1.45e-166 | 469 |
| Msa1446450 | MtrunA17_Chr1g0200981 | 62.429 | 354 | 133 | 0 | 9 | 362 | 6 | 359 | 6.72e-165 | 465 |
| Msa1446450 | MtrunA17_Chr6g0477771 | 54.121 | 364 | 162 | 3 | 1 | 361 | 1 | 362 | 6.34e-142 | 407 |
| Msa1446450 | MtrunA17_Chr3g0110001 | 54.017 | 361 | 162 | 2 | 5 | 361 | 3 | 363 | 1.01e-138 | 399 |
| Msa1446450 | MtrunA17_Chr6g0464931 | 88.182 | 110 | 13 | 0 | 1 | 110 | 1 | 110 | 4.17e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446450 | AT4G09670.1 | 58.357 | 353 | 147 | 0 | 9 | 361 | 7 | 359 | 5.77e-157 | 445 |
| Msa1446450 | AT1G34200.1 | 54.830 | 352 | 147 | 2 | 9 | 359 | 7 | 347 | 1.60e-136 | 393 |
| Msa1446450 | AT1G66130.1 | 44.199 | 362 | 193 | 6 | 5 | 359 | 3 | 362 | 1.16e-104 | 312 |
Find 102 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGATTCCAAATCTTAT+TGG | 0.177750 | tig0031364:+44138 | Msa1446450:intergenic |
| ACACCTGCTTCATTGTATTT+TGG | 0.185223 | tig0031364:+41234 | Msa1446450:intergenic |
| TGTTTAATATGTAAAGATAT+TGG | 0.186002 | tig0031364:-40537 | Msa1446450:three_prime_UTR |
| TTTAATAAAAGTACATATTA+AGG | 0.217593 | tig0031364:+40452 | Msa1446450:intergenic |
| CATATTCATATCTGATAAAA+AGG | 0.244809 | tig0031364:+41149 | Msa1446450:intergenic |
| ATTGTAAAGCTGACAATAAA+TGG | 0.249044 | tig0031364:-40900 | Msa1446450:CDS |
| CTATATAATGACTCTTTCTT+AGG | 0.250658 | tig0031364:-40687 | Msa1446450:three_prime_UTR |
| TGGAGAACTTGACAAGATTT+TGG | 0.253525 | tig0031364:-43849 | Msa1446450:CDS |
| ACTATAACCTCACTTGGTTT+TGG | 0.256553 | tig0031364:+40997 | Msa1446450:intergenic |
| ATAGTTGCTCGTTCCTTAAC+AGG | 0.275405 | tig0031364:+40706 | Msa1446450:intergenic |
| ATATCTGATCCTAATCTCTT+TGG | 0.283136 | tig0031364:-43743 | Msa1446450:CDS |
| GTTTAATATGTAAAGATATT+GGG | 0.295697 | tig0031364:-40536 | Msa1446450:three_prime_UTR |
| CTTGTGAAGCTTCTTTGATA+TGG | 0.295852 | tig0031364:-41203 | Msa1446450:CDS |
| CCAATAAGATTTGGAATCCT+TGG | 0.324504 | tig0031364:-44157 | Msa1446450:CDS |
| CTGGTTGGTGGGATTAAGTA+TGG | 0.329892 | tig0031364:-40925 | Msa1446450:CDS |
| AATATGGATATAACAGCAAT+AGG | 0.330557 | tig0031364:-41132 | Msa1446450:CDS |
| GGTTAAGGAATTTGCTCATC+TGG | 0.331077 | tig0031364:-40944 | Msa1446450:CDS |
| ATCTAATGGATTGCAGTATA+TGG | 0.331709 | tig0031364:-43816 | Msa1446450:CDS |
| GAAACAAAACCAATAAGATT+TGG | 0.345157 | tig0031364:-44166 | Msa1446450:exon |
| CCCCGTTAAGTATCCTCTAT+TGG | 0.356343 | tig0031364:-40747 | Msa1446450:three_prime_UTR |
| AGGATTTGGGTGGCTATTAG+AGG | 0.357847 | tig0031364:+44233 | Msa1446450:intergenic |
| ATGTCCTTTGCTAGGAAATC+TGG | 0.362493 | tig0031364:+41378 | Msa1446450:intergenic |
| TTGGAAGCTTGTGAATCTAA+TGG | 0.364162 | tig0031364:-43830 | Msa1446450:CDS |
| GTGTGGTTATACTAAGGATT+TGG | 0.367016 | tig0031364:+44219 | Msa1446450:intergenic |
| CATTATTAGTGTATTGTCAT+TGG | 0.369644 | tig0031364:-40486 | Msa1446450:three_prime_UTR |
| TCTCCAACATTTAAAGCAAC+TGG | 0.374707 | tig0031364:+43847 | Msa1446450:intergenic |
| TATTCCACAAGAAGCACTTA+TGG | 0.376037 | tig0031364:-40965 | Msa1446450:CDS |
| TGTGGTTATACTAAGGATTT+GGG | 0.381437 | tig0031364:+44220 | Msa1446450:intergenic |
| AACTCAACTCTCTACGCAAT+TGG | 0.388733 | tig0031364:-44085 | Msa1446450:CDS |
| CGACCAGCTTACACCTTCAC+TGG | 0.390665 | tig0031364:-43934 | Msa1446450:CDS |
| AAAGCCTCATTCTCTTCATT+AGG | 0.391917 | tig0031364:+41072 | Msa1446450:intergenic |
| ACAAGAAGCACTTATGGTTA+AGG | 0.393073 | tig0031364:-40959 | Msa1446450:CDS |
| GTGAAAGCTTCAATTGATAA+TGG | 0.396592 | tig0031364:-40838 | Msa1446450:CDS |
| GAGAGTTGAGTTTGGTGAGA+GGG | 0.406943 | tig0031364:+44077 | Msa1446450:intergenic |
| TGAGTTTGGTGAGAGGGTTA+TGG | 0.410178 | tig0031364:+44083 | Msa1446450:intergenic |
| TCCAATAGAGGATACTTAAC+GGG | 0.413630 | tig0031364:+40746 | Msa1446450:intergenic |
| AAACCAGTTGCTTTAAATGT+TGG | 0.419578 | tig0031364:-43869 | Msa1446450:CDS |
| ACTTGGTCCAACTTGCATAA+AGG | 0.422160 | tig0031364:-40621 | Msa1446450:three_prime_UTR |
| GAGATGCTCTAATACTCAAT+AGG | 0.424576 | tig0031364:+40802 | Msa1446450:intergenic |
| ATAACAGCAATAGGGGCAAA+AGG | 0.425672 | tig0031364:-41123 | Msa1446450:CDS |
| CTCTAATACTCAATAGGAAC+AGG | 0.430101 | tig0031364:+40808 | Msa1446450:intergenic |
| TATTACTCCTTTATGCAAGT+TGG | 0.438048 | tig0031364:+40614 | Msa1446450:intergenic |
| TCTCTTTGGTTCCCTTCAAT+CGG | 0.438224 | tig0031364:-43729 | Msa1446450:CDS |
| ATATGGATATAACAGCAATA+GGG | 0.448214 | tig0031364:-41131 | Msa1446450:CDS |
| CTCCAATAGAGGATACTTAA+CGG | 0.448905 | tig0031364:+40745 | Msa1446450:intergenic |
| CTCTTTCTTAGGTAACTAAC+GGG | 0.451806 | tig0031364:-40676 | Msa1446450:three_prime_UTR |
| ATAAATGGGCAATTATTAGT+AGG | 0.455056 | tig0031364:-40885 | Msa1446450:CDS |
| TTGTGAAGCTTCTTTGATAT+GGG | 0.455911 | tig0031364:-41202 | Msa1446450:CDS |
| TGAAGGGAACCAAAGAGATT+AGG | 0.466089 | tig0031364:+43715 | Msa1446450:intergenic |
| GTTCCTAGTGCATCAAGATC+TGG | 0.470430 | tig0031364:+41345 | Msa1446450:intergenic |
| TTGTAAAGCTGACAATAAAT+GGG | 0.474224 | tig0031364:-40899 | Msa1446450:CDS |
| TATTACTCATTTATATAAGC+AGG | 0.478273 | tig0031364:+40573 | Msa1446450:intergenic |
| ATGTAGACGGCATCGACGTC+CGG | 0.478389 | tig0031364:+43946 | Msa1446450:intergenic |
| ATTGCGTAGAGAGTTGAGTT+TGG | 0.482375 | tig0031364:+44069 | Msa1446450:intergenic |
| ACTTGAGTGTGGTTATACTA+AGG | 0.491210 | tig0031364:+44213 | Msa1446450:intergenic |
| AGTATTAGAGCATCTCCAAT+GGG | 0.494063 | tig0031364:-40795 | Msa1446450:exon |
| GGATGAATCATACCGATTGA+AGG | 0.499775 | tig0031364:+43698 | Msa1446450:intergenic |
| AAGGAATTTGCTCATCTGGT+TGG | 0.501930 | tig0031364:-40940 | Msa1446450:CDS |
| AATTTGCTCATCTGGTTGGT+GGG | 0.506597 | tig0031364:-40936 | Msa1446450:CDS |
| CTTGATGCACTAGGAACACT+AGG | 0.518180 | tig0031364:-41339 | Msa1446450:CDS |
| GTAATAAAATGCGTAAAACT+TGG | 0.519190 | tig0031364:-40638 | Msa1446450:three_prime_UTR |
| GAATTTGCTCATCTGGTTGG+TGG | 0.520943 | tig0031364:-40937 | Msa1446450:CDS |
| TTGTTGAACTTTCTACTGGT+TGG | 0.522425 | tig0031364:-41023 | Msa1446450:CDS |
| AGGTGTAAGCTGGTCGGAAG+TGG | 0.523445 | tig0031364:+43922 | Msa1446450:intergenic |
| GTAATAAAATGTGTACTACT+TGG | 0.529499 | tig0031364:-40597 | Msa1446450:three_prime_UTR |
| TGCATGGGAAGGGAAATTGT+TGG | 0.532533 | tig0031364:+44005 | Msa1446450:intergenic |
| TGCCCAGTGAAGGTGTAAGC+TGG | 0.532976 | tig0031364:+43912 | Msa1446450:intergenic |
| GGAGTGGTCCTTGTTAAGTA+AGG | 0.533286 | tig0031364:+40768 | Msa1446450:intergenic |
| ACTCTTTCTTAGGTAACTAA+CGG | 0.540399 | tig0031364:-40677 | Msa1446450:three_prime_UTR |
| GCTAGGAAATCTGGACTCAC+CGG | 0.540515 | tig0031364:+41387 | Msa1446450:intergenic |
| AGAGGATACTTAACGGGGAG+TGG | 0.547127 | tig0031364:+40752 | Msa1446450:intergenic |
| AAACCAAAATACAATGAAGC+AGG | 0.549712 | tig0031364:-41237 | Msa1446450:CDS |
| CGTTAAGTATCCTCTATTGG+AGG | 0.550849 | tig0031364:-40744 | Msa1446450:three_prime_UTR |
| TAACAGCAATAGGGGCAAAA+GGG | 0.550871 | tig0031364:-41122 | Msa1446450:CDS |
| AGAGAGTTGAGTTTGGTGAG+AGG | 0.560018 | tig0031364:+44076 | Msa1446450:intergenic |
| TTAACCATAAGTGCTTCTTG+TGG | 0.562009 | tig0031364:+40961 | Msa1446450:intergenic |
| GATGAATCATACCGATTGAA+GGG | 0.566141 | tig0031364:+43699 | Msa1446450:intergenic |
| TATACCTAATGAAGAGAATG+AGG | 0.567350 | tig0031364:-41076 | Msa1446450:CDS |
| GACGTCCGGATCATCTAAAA+CGG | 0.571998 | tig0031364:+43960 | Msa1446450:intergenic |
| TCACACGAATGTCCTTTGCT+AGG | 0.572854 | tig0031364:+41370 | Msa1446450:intergenic |
| CTAGGAAATCTGGACTCACC+GGG | 0.573636 | tig0031364:+41388 | Msa1446450:intergenic |
| TGGAAAAGTAAACTTGAGTG+TGG | 0.578718 | tig0031364:+44202 | Msa1446450:intergenic |
| TATGGATATAACAGCAATAG+GGG | 0.579131 | tig0031364:-41130 | Msa1446450:CDS |
| GAGTATTAGAGCATCTCCAA+TGG | 0.579422 | tig0031364:-40796 | Msa1446450:exon |
| CTAGGAACACTAGGTGACAC+TGG | 0.593492 | tig0031364:-41330 | Msa1446450:CDS |
| GGTCGGAAGTGGCATGTAGA+CGG | 0.596812 | tig0031364:+43933 | Msa1446450:intergenic |
| TGGTTGGTGGGATTAAGTAT+GGG | 0.605617 | tig0031364:-40924 | Msa1446450:CDS |
| AAGTATCCTCTATTGGAGGA+AGG | 0.607049 | tig0031364:-40740 | Msa1446450:three_prime_UTR |
| AAGCCAGATCTTGATGCACT+AGG | 0.607513 | tig0031364:-41348 | Msa1446450:CDS |
| GAACACTAGGTGACACTGGT+TGG | 0.608823 | tig0031364:-41326 | Msa1446450:CDS |
| GACCAGCTTACACCTTCACT+GGG | 0.617191 | tig0031364:-43933 | Msa1446450:CDS |
| TATTAGTAGGAAAACTCAAG+TGG | 0.621897 | tig0031364:-40872 | Msa1446450:CDS |
| GAGTCCAGATTTCCTAGCAA+AGG | 0.627187 | tig0031364:-41382 | Msa1446450:CDS |
| TAGCTATCTCTGCACAACCA+AGG | 0.627873 | tig0031364:+44121 | Msa1446450:intergenic |
| CAGTGAAGGTGTAAGCTGGT+CGG | 0.634499 | tig0031364:+43916 | Msa1446450:intergenic |
| GGTTATACTAAGGATTTGGG+TGG | 0.638264 | tig0031364:+44223 | Msa1446450:intergenic |
| TATTAGAGCATCTCCAATGG+GGG | 0.655302 | tig0031364:-40793 | Msa1446450:exon |
| TTGGAATCCAAAACCAAGTG+AGG | 0.661767 | tig0031364:-41004 | Msa1446450:CDS |
| CCAATAGAGGATACTTAACG+GGG | 0.684716 | tig0031364:+40747 | Msa1446450:intergenic |
| ATTAGAGCATCTCCAATGGG+GGG | 0.701573 | tig0031364:-40792 | Msa1446450:exon |
| GTATTAGAGCATCTCCAATG+GGG | 0.721305 | tig0031364:-40794 | Msa1446450:exon |
| AGTATATGGATTCTACTATG+TGG | 0.724513 | tig0031364:-43802 | Msa1446450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCAATTTTTGTTAAAATT+AGG | - | tig0031364:41075-41094 | Msa1446450:CDS | 10.0% |
| !!! | ATTTATTTTAGACTAAAATA+TGG | - | tig0031364:41146-41165 | Msa1446450:CDS | 10.0% |
| !!! | AACTATTTTGTTTTTTAAAA+AGG | + | tig0031364:41280-41299 | Msa1446450:intergenic | 10.0% |
| !! | AAATTATCTTCATAAAATAA+AGG | + | tig0031364:41489-41508 | Msa1446450:intergenic | 10.0% |
| !!! | AAAATAATTTTTTTTACAAG+AGG | - | tig0031364:41584-41603 | Msa1446450:intron | 10.0% |
| !!! | TAAACAAAATTTATTTTAGT+AGG | - | tig0031364:42415-42434 | Msa1446450:intron | 10.0% |
| !!! | AAACAAAATTTATTTTAGTA+GGG | - | tig0031364:42416-42435 | Msa1446450:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | - | tig0031364:42448-42467 | Msa1446450:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | - | tig0031364:42449-42468 | Msa1446450:intron | 10.0% |
| !!! | TAAATTTTATTGTATTTTTG+AGG | - | tig0031364:42565-42584 | Msa1446450:intron | 10.0% |
| !!! | AAATTTTATTGTATTTTTGA+GGG | - | tig0031364:42566-42585 | Msa1446450:intron | 10.0% |
| !! | AAAAAAAAAAAAAACAAATG+TGG | - | tig0031364:43218-43237 | Msa1446450:intron | 10.0% |
| !!! | AAAAACAAGTTTTTTTTACA+GGG | + | tig0031364:41210-41229 | Msa1446450:intergenic | 15.0% |
| !!! | TAAAAACAAGTTTTTTTTAC+AGG | + | tig0031364:41211-41230 | Msa1446450:intergenic | 15.0% |
| !! | AAAAAACAAAAAAATTTGCA+GGG | + | tig0031364:41236-41255 | Msa1446450:intergenic | 15.0% |
| !! | AAAAAAACAAAAAAATTTGC+AGG | + | tig0031364:41237-41256 | Msa1446450:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | - | tig0031364:41385-41404 | Msa1446450:CDS | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | tig0031364:41386-41405 | Msa1446450:CDS | 15.0% |
| !! | AAACAAAACAAAAAATTACA+TGG | - | tig0031364:41414-41433 | Msa1446450:intron | 15.0% |
| !! | ATAAAATAAAGGCTAAAATA+TGG | + | tig0031364:41478-41497 | Msa1446450:intergenic | 15.0% |
| !!! | AATCATTGTTGTAAATTTTA+AGG | + | tig0031364:41623-41642 | Msa1446450:intergenic | 15.0% |
| !! | TTAAAATTTACAACAATGAT+TGG | - | tig0031364:41622-41641 | Msa1446450:intron | 15.0% |
| !! | TAAAATTTACAACAATGATT+GGG | - | tig0031364:41623-41642 | Msa1446450:intron | 15.0% |
| !!! | CTACAAATATTATTCTTTTA+TGG | - | tig0031364:41926-41945 | Msa1446450:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | tig0031364:42478-42497 | Msa1446450:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | tig0031364:42136-42155 | Msa1446450:intergenic | 15.0% |
| !!! | ATTTTTGCGATATTTTTTTT+TGG | + | tig0031364:42220-42239 | Msa1446450:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | tig0031364:42256-42275 | Msa1446450:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | tig0031364:42478-42497 | Msa1446450:intron | 15.0% |
| !!! | AATTTTATTGTATTTTTGAG+GGG | - | tig0031364:42567-42586 | Msa1446450:intron | 15.0% |
| !!! | TATATTATACTAACTTTTCA+AGG | - | tig0031364:42703-42722 | Msa1446450:intron | 15.0% |
| !! | CCTCAAAAATAAAATAAAAA+CGG | - | tig0031364:42742-42761 | Msa1446450:intron | 15.0% |
| !! | AACATAATTATATCTATGTA+TGG | + | tig0031364:42783-42802 | Msa1446450:intergenic | 15.0% |
| !! | CAATAAAACACAAAATTATA+TGG | - | tig0031364:42918-42937 | Msa1446450:intron | 15.0% |
| !!! | AAAAGTAGTTTATATTTTCT+TGG | + | tig0031364:42948-42967 | Msa1446450:intergenic | 15.0% |
| !! | ATATATATATATTTCTCTCA+TGG | + | tig0031364:43010-43029 | Msa1446450:intergenic | 15.0% |
| !! | CGTTAATTATATTTAATTAC+AGG | - | tig0031364:43307-43326 | Msa1446450:intron | 15.0% |
| !! | TGTTTAATATGTAAAGATAT+TGG | - | tig0031364:44200-44219 | Msa1446450:five_prime_UTR | 15.0% |
| !! | GTTTAATATGTAAAGATATT+GGG | - | tig0031364:44201-44220 | Msa1446450:five_prime_UTR | 15.0% |
| !!! | CATATTTAAATACTTTTCAT+TGG | - | tig0031364:44225-44244 | Msa1446450:five_prime_UTR | 15.0% |
| !!! | TAAAAAACAAAATAGTTTGC+AGG | - | tig0031364:41283-41302 | Msa1446450:CDS | 20.0% |
| !!! | TTCTTCTTATGTTTTTTTAG+AGG | - | tig0031364:41519-41538 | Msa1446450:intron | 20.0% |
| !!! | ATTCTTTTATGATTTATCCT+TGG | - | tig0031364:41836-41855 | Msa1446450:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | tig0031364:42166-42185 | Msa1446450:intron | 20.0% |
| !! | GTGTTAAGAACATTATTAAA+AGG | - | tig0031364:42190-42209 | Msa1446450:intron | 20.0% |
| !!! | ATTTTTACTCAATTATTGTG+TGG | + | tig0031364:42633-42652 | Msa1446450:intergenic | 20.0% |
| !!! | CCGTTTTTATTTTATTTTTG+AGG | + | tig0031364:42745-42764 | Msa1446450:intergenic | 20.0% |
| !!! | TATATATATATACGCGTTTT+TGG | - | tig0031364:43019-43038 | Msa1446450:intron | 20.0% |
| !! | TAAACAACATCATTAACAAT+CGG | + | tig0031364:43048-43067 | Msa1446450:intergenic | 20.0% |
| !! | CATATTCATATCTGATAAAA+AGG | + | tig0031364:43591-43610 | Msa1446450:intergenic | 20.0% |
| !!! | CTTTTTATCAGATATGAATA+TGG | - | tig0031364:43589-43608 | Msa1446450:intron | 20.0% |
| !! | TATTACTCATTTATATAAGC+AGG | + | tig0031364:44167-44186 | Msa1446450:intergenic | 20.0% |
| !!! | ATACACTTTTTGTTTTGAGA+AGG | + | tig0031364:40474-40493 | None:intergenic | 25.0% |
| ! | GAAACAAAACCAATAAGATT+TGG | - | tig0031364:40590-40609 | Msa1446450:three_prime_UTR | 25.0% |
| !!! | TTGTTGCTTTTTCTAATGAA+CGG | + | tig0031364:40700-40719 | Msa1446450:intergenic | 25.0% |
| !!! | TGAACCATATATTTTTGCAT+GGG | + | tig0031364:40750-40769 | Msa1446450:intergenic | 25.0% |
| !!! | ATGAACCATATATTTTTGCA+TGG | + | tig0031364:40751-40770 | Msa1446450:intergenic | 25.0% |
| !!! | TGAAACATTTTTTCAGTTCT+AGG | + | tig0031364:40989-41008 | Msa1446450:intergenic | 25.0% |
| ! | CAAAAATTGAAACATCAGAA+AGG | + | tig0031364:41067-41086 | Msa1446450:intergenic | 25.0% |
| ! | TATGCAAATCATCACAAAAA+TGG | - | tig0031364:41347-41366 | Msa1446450:CDS | 25.0% |
| ! | ATGCAAATCATCACAAAAAT+GGG | - | tig0031364:41348-41367 | Msa1446450:CDS | 25.0% |
| !! | ATTCTTTTATGATTTATCCC+TGG | - | tig0031364:41736-41755 | Msa1446450:intron | 25.0% |
| !!! | TCTAATTTTTTGTTTCTCCA+GGG | + | tig0031364:41756-41775 | Msa1446450:intergenic | 25.0% |
| !!! | CTAAATTTTTTGTTTCTCCA+AGG | + | tig0031364:41856-41875 | Msa1446450:intergenic | 25.0% |
| !! | ATTCTTTTATGGTTTATCCT+TGG | - | tig0031364:41937-41956 | Msa1446450:intron | 25.0% |
| !! | TGAAGGGTTAATTATGTTTT+TGG | - | tig0031364:42006-42025 | Msa1446450:intron | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | tig0031364:42125-42144 | Msa1446450:intergenic | 25.0% |
| !!! | TTTGCGATATTTTTTTTTGG+AGG | + | tig0031364:42217-42236 | Msa1446450:intergenic | 25.0% |
| ! | TTTATTGTCAAGAAACAATC+TGG | + | tig0031364:42905-42924 | Msa1446450:intergenic | 25.0% |
| !!! | TCAATTAGAAAAGTACTTAC+AGG | - | tig0031364:43277-43296 | Msa1446450:intron | 25.0% |
| !! | ATTGCATTAGAGCAATTTTA+TGG | - | tig0031364:43435-43454 | Msa1446450:intron | 25.0% |
| !! | TTGCATTAGAGCAATTTTAT+GGG | - | tig0031364:43436-43455 | Msa1446450:intron | 25.0% |
| !!! | ATTGTATTTTGGTTTGTGTA+AGG | + | tig0031364:43495-43514 | Msa1446450:intergenic | 25.0% |
| ! | AATATGGATATAACAGCAAT+AGG | - | tig0031364:43605-43624 | Msa1446450:intron | 25.0% |
| ! | ATATGGATATAACAGCAATA+GGG | - | tig0031364:43606-43625 | Msa1446450:intron | 25.0% |
| !! | TATTTTGTTGAACTTTCTAC+TGG | - | tig0031364:43710-43729 | Msa1446450:intron | 25.0% |
| !!! | TTTTTAACTATAACCTCACT+TGG | + | tig0031364:43749-43768 | Msa1446450:intergenic | 25.0% |
| ! | ATTGTAAAGCTGACAATAAA+TGG | - | tig0031364:43837-43856 | Msa1446450:CDS | 25.0% |
| ! | TTGTAAAGCTGACAATAAAT+GGG | - | tig0031364:43838-43857 | Msa1446450:CDS | 25.0% |
| ! | ATAAATGGGCAATTATTAGT+AGG | - | tig0031364:43852-43871 | Msa1446450:CDS | 25.0% |
| ! | CTATATAATGACTCTTTCTT+AGG | - | tig0031364:44050-44069 | Msa1446450:CDS | 25.0% |
| ! | GTAATAAAATGCGTAAAACT+TGG | - | tig0031364:44099-44118 | Msa1446450:CDS | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | tig0031364:44140-44159 | Msa1446450:CDS | 25.0% |
| ! | CATTATTAGTGTATTGTCAT+TGG | - | tig0031364:44251-44270 | Msa1446450:five_prime_UTR | 25.0% |
| !!! | TTTTGTTTTGAGAAGGAGAA+AGG | + | tig0031364:40467-40486 | None:intergenic | 30.0% |
| TGTGGTTATACTAAGGATTT+GGG | + | tig0031364:40520-40539 | None:intergenic | 30.0% | |
| !! | ATTCTTTTTGGAAGAGAGAT+TGG | + | tig0031364:40558-40577 | None:intergenic | 30.0% |
| TCTCTCTTCCAAAAAGAATA+TGG | - | tig0031364:40559-40578 | Msa1446450:three_prime_UTR | 30.0% | |
| ! | TTCATGAGCCATATTCTTTT+TGG | + | tig0031364:40570-40589 | Msa1446450:intergenic | 30.0% |
| !! | CATATATTTTTGCATGGGAA+GGG | + | tig0031364:40745-40764 | Msa1446450:intergenic | 30.0% |
| ! | AAACCAGTTGCTTTAAATGT+TGG | - | tig0031364:40887-40906 | Msa1446450:CDS | 30.0% |
| !! | ATCTAATGGATTGCAGTATA+TGG | - | tig0031364:40940-40959 | Msa1446450:CDS | 30.0% |
| AGTATATGGATTCTACTATG+TGG | - | tig0031364:40954-40973 | Msa1446450:CDS | 30.0% | |
| ATATCTGATCCTAATCTCTT+TGG | - | tig0031364:41013-41032 | Msa1446450:CDS | 30.0% | |
| AATTGAAACATCAGAAAGGA+TGG | + | tig0031364:41063-41082 | Msa1446450:intergenic | 30.0% | |
| CAAAATGAGACATATTTGCA+GGG | + | tig0031364:41179-41198 | Msa1446450:intergenic | 30.0% | |
| AGGAACCAAAAACTACAAAA+TGG | - | tig0031364:41303-41322 | Msa1446450:CDS | 30.0% | |
| GGAACCAAAAACTACAAAAT+GGG | - | tig0031364:41304-41323 | Msa1446450:CDS | 30.0% | |
| ! | TGAACCCATTTTGTAGTTTT+TGG | + | tig0031364:41311-41330 | Msa1446450:intergenic | 30.0% |
| TGCAAATCATCACAAAAATG+GGG | - | tig0031364:41349-41368 | Msa1446450:CDS | 30.0% | |
| ! | CATGGACTAAAACTAAAATG+AGG | - | tig0031364:41432-41451 | Msa1446450:intron | 30.0% |
| TAAAATGAGGCATATTTGCA+GGG | - | tig0031364:41445-41464 | Msa1446450:intron | 30.0% | |
| !!! | GTCTAATTTTTTGTTTCTCC+AGG | + | tig0031364:41757-41776 | Msa1446450:intergenic | 30.0% |
| !!! | CTAAGTTTTTTGTTTCTCCA+AGG | + | tig0031364:41957-41976 | Msa1446450:intergenic | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | + | tig0031364:42093-42112 | Msa1446450:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | + | tig0031364:42094-42113 | Msa1446450:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | tig0031364:42353-42372 | Msa1446450:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | - | tig0031364:42493-42512 | Msa1446450:intron | 30.0% | |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | - | tig0031364:42508-42527 | Msa1446450:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | - | tig0031364:42509-42528 | Msa1446450:intron | 30.0% |
| !! | TTTATTGTATTTTTGAGGGG+AGG | - | tig0031364:42570-42589 | Msa1446450:intron | 30.0% |
| !! | TTATTGTATTTTTGAGGGGA+GGG | - | tig0031364:42571-42590 | Msa1446450:intron | 30.0% |
| ! | TTAATGATGTTGTTTAAGCC+AGG | - | tig0031364:43052-43071 | Msa1446450:intron | 30.0% |
| ! | ACTTTGATCCATTGACTATT+TGG | - | tig0031364:43101-43120 | Msa1446450:intron | 30.0% |
| AAACCAAAATACAATGAAGC+AGG | - | tig0031364:43500-43519 | Msa1446450:intron | 30.0% | |
| TTGTGAAGCTTCTTTGATAT+GGG | - | tig0031364:43535-43554 | Msa1446450:intron | 30.0% | |
| TATGGATATAACAGCAATAG+GGG | - | tig0031364:43607-43626 | Msa1446450:intron | 30.0% | |
| TATACCTAATGAAGAGAATG+AGG | - | tig0031364:43661-43680 | Msa1446450:intron | 30.0% | |
| TATTAGTAGGAAAACTCAAG+TGG | - | tig0031364:43865-43884 | Msa1446450:CDS | 30.0% | |
| GTGAAAGCTTCAATTGATAA+TGG | - | tig0031364:43899-43918 | Msa1446450:CDS | 30.0% | |
| ACTCTTTCTTAGGTAACTAA+CGG | - | tig0031364:44060-44079 | Msa1446450:CDS | 30.0% | |
| TATTACTCCTTTATGCAAGT+TGG | + | tig0031364:44126-44145 | Msa1446450:intergenic | 30.0% | |
| GTGTGGTTATACTAAGGATT+TGG | + | tig0031364:40521-40540 | None:intergenic | 35.0% | |
| ACTTGAGTGTGGTTATACTA+AGG | + | tig0031364:40527-40546 | None:intergenic | 35.0% | |
| TGGAAAAGTAAACTTGAGTG+TGG | + | tig0031364:40538-40557 | None:intergenic | 35.0% | |
| CCAAGGATTCCAAATCTTAT+TGG | + | tig0031364:40602-40621 | Msa1446450:intergenic | 35.0% | |
| ! | CCAATAAGATTTGGAATCCT+TGG | - | tig0031364:40599-40618 | Msa1446450:three_prime_UTR | 35.0% |
| !! | CCATATATTTTTGCATGGGA+AGG | + | tig0031364:40746-40765 | Msa1446450:intergenic | 35.0% |
| CCTTCCCATGCAAAAATATA+TGG | - | tig0031364:40743-40762 | Msa1446450:three_prime_UTR | 35.0% | |
| ! | TCTCCAACATTTAAAGCAAC+TGG | + | tig0031364:40893-40912 | Msa1446450:intergenic | 35.0% |
| ! | TGGAGAACTTGACAAGATTT+TGG | - | tig0031364:40907-40926 | Msa1446450:CDS | 35.0% |
| TTGGAAGCTTGTGAATCTAA+TGG | - | tig0031364:40926-40945 | Msa1446450:CDS | 35.0% | |
| ! | GATGAATCATACCGATTGAA+GGG | + | tig0031364:41041-41060 | Msa1446450:intergenic | 35.0% |
| CCAAAATGAGACATATTTGC+AGG | + | tig0031364:41180-41199 | Msa1446450:intergenic | 35.0% | |
| ! | CCTGCAAATATGTCTCATTT+TGG | - | tig0031364:41177-41196 | Msa1446450:CDS | 35.0% |
| !!! | TTTTTAAAATAGGCCCTTGC+AGG | - | tig0031364:41252-41271 | Msa1446450:CDS | 35.0% |
| !!! | TTTTAAAATAGGCCCTTGCA+GGG | - | tig0031364:41253-41272 | Msa1446450:CDS | 35.0% |
| !! | TTTTAAAAAGGTCCCTGCAA+GGG | + | tig0031364:41268-41287 | Msa1446450:intergenic | 35.0% |
| !! | TTTTTAAAAAGGTCCCTGCA+AGG | + | tig0031364:41269-41288 | Msa1446450:intergenic | 35.0% |
| CTAAAATGAGGCATATTTGC+AGG | - | tig0031364:41444-41463 | Msa1446450:intron | 35.0% | |
| AAGTAAGGACTAAACTTGCA+AGG | + | tig0031364:42049-42068 | Msa1446450:intergenic | 35.0% | |
| ACTATGAGCCAAATAGTCAA+TGG | + | tig0031364:43112-43131 | Msa1446450:intergenic | 35.0% | |
| TTGGCTCATAGTTTGATTGT+TGG | - | tig0031364:43120-43139 | Msa1446450:intron | 35.0% | |
| !! | TTTGTTTTCGCAATTGTGCT+TGG | - | tig0031364:43170-43189 | Msa1446450:intron | 35.0% |
| TTGTGCTTGGAGAATATCAT+TGG | - | tig0031364:43183-43202 | Msa1446450:intron | 35.0% | |
| ! | ACATGCTACATTTTCTTACC+CGG | - | tig0031364:43331-43350 | Msa1446450:intron | 35.0% |
| !!! | TGTAAGGCTTTTGCTGTTTT+GGG | + | tig0031364:43479-43498 | Msa1446450:intergenic | 35.0% |
| ! | ACACCTGCTTCATTGTATTT+TGG | + | tig0031364:43506-43525 | Msa1446450:intergenic | 35.0% |
| CTTGTGAAGCTTCTTTGATA+TGG | - | tig0031364:43534-43553 | Msa1446450:intron | 35.0% | |
| AAAGCCTCATTCTCTTCATT+AGG | + | tig0031364:43668-43687 | Msa1446450:intergenic | 35.0% | |
| TTGTTGAACTTTCTACTGGT+TGG | - | tig0031364:43714-43733 | Msa1446450:CDS | 35.0% | |
| ! | ACTATAACCTCACTTGGTTT+TGG | + | tig0031364:43743-43762 | Msa1446450:intergenic | 35.0% |
| !! | TATTCCACAAGAAGCACTTA+TGG | - | tig0031364:43772-43791 | Msa1446450:CDS | 35.0% |
| TTAACCATAAGTGCTTCTTG+TGG | + | tig0031364:43779-43798 | Msa1446450:intergenic | 35.0% | |
| !! | ACAAGAAGCACTTATGGTTA+AGG | - | tig0031364:43778-43797 | Msa1446450:CDS | 35.0% |
| CTCTAATACTCAATAGGAAC+AGG | + | tig0031364:43932-43951 | Msa1446450:intergenic | 35.0% | |
| GAGATGCTCTAATACTCAAT+AGG | + | tig0031364:43938-43957 | Msa1446450:intergenic | 35.0% | |
| ! | AGTATTAGAGCATCTCCAAT+GGG | - | tig0031364:43942-43961 | Msa1446450:CDS | 35.0% |
| TCCAATAGAGGATACTTAAC+GGG | + | tig0031364:43994-44013 | Msa1446450:intergenic | 35.0% | |
| CTCCAATAGAGGATACTTAA+CGG | + | tig0031364:43995-44014 | Msa1446450:intergenic | 35.0% | |
| ! | ATTTTTCCTTCCTCCAATAG+AGG | + | tig0031364:44006-44025 | Msa1446450:intergenic | 35.0% |
| GGAAAAATGAGTTCCTGTTA+AGG | - | tig0031364:44018-44037 | Msa1446450:CDS | 35.0% | |
| CTCTTTCTTAGGTAACTAAC+GGG | - | tig0031364:44061-44080 | Msa1446450:CDS | 35.0% | |
| GGTTATACTAAGGATTTGGG+TGG | + | tig0031364:40517-40536 | None:intergenic | 40.0% | |
| ATTGCGTAGAGAGTTGAGTT+TGG | + | tig0031364:40671-40690 | Msa1446450:intergenic | 40.0% | |
| AACTCAACTCTCTACGCAAT+TGG | - | tig0031364:40671-40690 | Msa1446450:three_prime_UTR | 40.0% | |
| TGAAGGGAACCAAAGAGATT+AGG | + | tig0031364:41025-41044 | Msa1446450:intergenic | 40.0% | |
| ! | TCTCTTTGGTTCCCTTCAAT+CGG | - | tig0031364:41027-41046 | Msa1446450:CDS | 40.0% |
| ! | GGATGAATCATACCGATTGA+AGG | + | tig0031364:41042-41061 | Msa1446450:intergenic | 40.0% |
| ATCATCACAAAAATGGGGTC+AGG | - | tig0031364:41354-41373 | Msa1446450:CDS | 40.0% | |
| TCATCACAAAAATGGGGTCA+GGG | - | tig0031364:41355-41374 | Msa1446450:CDS | 40.0% | |
| ! | TGCAAGGTCGCAATTTTGTA+GGG | + | tig0031364:42033-42052 | Msa1446450:intergenic | 40.0% |
| ! | TTGCAAGGTCGCAATTTTGT+AGG | + | tig0031364:42034-42053 | Msa1446450:intergenic | 40.0% |
| ATGTCCTTTGCTAGGAAATC+TGG | + | tig0031364:43362-43381 | Msa1446450:intergenic | 40.0% | |
| !!! | GTGTAAGGCTTTTGCTGTTT+TGG | + | tig0031364:43480-43499 | Msa1446450:intergenic | 40.0% |
| ATAACAGCAATAGGGGCAAA+AGG | - | tig0031364:43614-43633 | Msa1446450:intron | 40.0% | |
| TAACAGCAATAGGGGCAAAA+GGG | - | tig0031364:43615-43634 | Msa1446450:intron | 40.0% | |
| TTGGAATCCAAAACCAAGTG+AGG | - | tig0031364:43733-43752 | Msa1446450:CDS | 40.0% | |
| ! | GGTTAAGGAATTTGCTCATC+TGG | - | tig0031364:43793-43812 | Msa1446450:CDS | 40.0% |
| ! | AAGGAATTTGCTCATCTGGT+TGG | - | tig0031364:43797-43816 | Msa1446450:CDS | 40.0% |
| ! | AATTTGCTCATCTGGTTGGT+GGG | - | tig0031364:43801-43820 | Msa1446450:CDS | 40.0% |
| !! | TGGTTGGTGGGATTAAGTAT+GGG | - | tig0031364:43813-43832 | Msa1446450:CDS | 40.0% |
| ! | GAGTATTAGAGCATCTCCAA+TGG | - | tig0031364:43941-43960 | Msa1446450:CDS | 40.0% |
| ! | GTATTAGAGCATCTCCAATG+GGG | - | tig0031364:43943-43962 | Msa1446450:CDS | 40.0% |
| ! | TATTAGAGCATCTCCAATGG+GGG | - | tig0031364:43944-43963 | Msa1446450:CDS | 40.0% |
| CCAATAGAGGATACTTAACG+GGG | + | tig0031364:43993-44012 | Msa1446450:intergenic | 40.0% | |
| CGTTAAGTATCCTCTATTGG+AGG | - | tig0031364:43993-44012 | Msa1446450:CDS | 40.0% | |
| AAGTATCCTCTATTGGAGGA+AGG | - | tig0031364:43997-44016 | Msa1446450:CDS | 40.0% | |
| ATAGTTGCTCGTTCCTTAAC+AGG | + | tig0031364:44034-44053 | Msa1446450:intergenic | 40.0% | |
| ACTTGGTCCAACTTGCATAA+AGG | - | tig0031364:44116-44135 | Msa1446450:CDS | 40.0% | |
| AGGATTTGGGTGGCTATTAG+AGG | + | tig0031364:40507-40526 | None:intergenic | 45.0% | |
| TAGCTATCTCTGCACAACCA+AGG | + | tig0031364:40619-40638 | Msa1446450:intergenic | 45.0% | |
| ! | TGAGTTTGGTGAGAGGGTTA+TGG | + | tig0031364:40657-40676 | Msa1446450:intergenic | 45.0% |
| ! | GAGAGTTGAGTTTGGTGAGA+GGG | + | tig0031364:40663-40682 | Msa1446450:intergenic | 45.0% |
| ! | AGAGAGTTGAGTTTGGTGAG+AGG | + | tig0031364:40664-40683 | Msa1446450:intergenic | 45.0% |
| TGCATGGGAAGGGAAATTGT+TGG | + | tig0031364:40735-40754 | Msa1446450:intergenic | 45.0% | |
| GACGTCCGGATCATCTAAAA+CGG | + | tig0031364:40780-40799 | Msa1446450:intergenic | 45.0% | |
| TTTGTGTCATGCTACGTTCC+TGG | + | tig0031364:43073-43092 | Msa1446450:intergenic | 45.0% | |
| ! | TTGTTGGTCTAGCTACCTCA+AGG | - | tig0031364:43136-43155 | Msa1446450:intron | 45.0% |
| ! | TGTTGGTCTAGCTACCTCAA+GGG | - | tig0031364:43137-43156 | Msa1446450:intron | 45.0% |
| GAGTCCAGATTTCCTAGCAA+AGG | - | tig0031364:43355-43374 | Msa1446450:intron | 45.0% | |
| TCACACGAATGTCCTTTGCT+AGG | + | tig0031364:43370-43389 | Msa1446450:intergenic | 45.0% | |
| AAGCCAGATCTTGATGCACT+AGG | - | tig0031364:43389-43408 | Msa1446450:intron | 45.0% | |
| GTTCCTAGTGCATCAAGATC+TGG | + | tig0031364:43395-43414 | Msa1446450:intergenic | 45.0% | |
| CTTGATGCACTAGGAACACT+AGG | - | tig0031364:43398-43417 | Msa1446450:intron | 45.0% | |
| ! | GAATTTGCTCATCTGGTTGG+TGG | - | tig0031364:43800-43819 | Msa1446450:CDS | 45.0% |
| !! | CTGGTTGGTGGGATTAAGTA+TGG | - | tig0031364:43812-43831 | Msa1446450:CDS | 45.0% |
| ! | ATTAGAGCATCTCCAATGGG+GGG | - | tig0031364:43945-43964 | Msa1446450:CDS | 45.0% |
| GGAGTGGTCCTTGTTAAGTA+AGG | + | tig0031364:43972-43991 | Msa1446450:intergenic | 45.0% | |
| CCCCGTTAAGTATCCTCTAT+TGG | - | tig0031364:43990-44009 | Msa1446450:CDS | 45.0% | |
| !!! | TTTTTTTGTTTTTTTAAAAT+AGG | - | tig0031364:41242-41261 | Msa1446450:CDS | 5.0% |
| !!! | AAATTTATTTTATTAAATGA+AGG | - | tig0031364:41989-42008 | Msa1446450:intron | 5.0% |
| !!! | AATTTATTTTATTAAATGAA+GGG | - | tig0031364:41990-42009 | Msa1446450:intron | 5.0% |
| !! | TTAAAAAATTTAATAGTTTA+AGG | - | tig0031364:42387-42406 | Msa1446450:intron | 5.0% |
| !! | CGACGCCGTTTTAGATGATC+CGG | - | tig0031364:40772-40791 | Msa1446450:three_prime_UTR | 50.0% |
| ! | CAGTGAAGGTGTAAGCTGGT+CGG | + | tig0031364:40824-40843 | Msa1446450:intergenic | 50.0% |
| GACCAGCTTACACCTTCACT+GGG | - | tig0031364:40823-40842 | Msa1446450:CDS | 50.0% | |
| CAGCAAAAACTGCCCAGTGA+AGG | + | tig0031364:40838-40857 | Msa1446450:intergenic | 50.0% | |
| TAGCTACCTCAAGGGATCGA+GGG | - | tig0031364:43145-43164 | Msa1446450:intron | 50.0% | |
| CTAGGAAATCTGGACTCACC+GGG | + | tig0031364:43352-43371 | Msa1446450:intergenic | 50.0% | |
| GCTAGGAAATCTGGACTCAC+CGG | + | tig0031364:43353-43372 | Msa1446450:intergenic | 50.0% | |
| CTAGGAACACTAGGTGACAC+TGG | - | tig0031364:43407-43426 | Msa1446450:intron | 50.0% | |
| GAACACTAGGTGACACTGGT+TGG | - | tig0031364:43411-43430 | Msa1446450:intron | 50.0% | |
| GTTAAGTAAGGACCCCCCAT+TGG | + | tig0031364:43960-43979 | Msa1446450:intergenic | 50.0% | |
| TGGGGGGTCCTTACTTAACA+AGG | - | tig0031364:43961-43980 | Msa1446450:CDS | 50.0% | |
| AGAGGATACTTAACGGGGAG+TGG | + | tig0031364:43988-44007 | Msa1446450:intergenic | 50.0% | |
| !! | ATGTAGACGGCATCGACGTC+CGG | + | tig0031364:40794-40813 | Msa1446450:intergenic | 55.0% |
| GGTCGGAAGTGGCATGTAGA+CGG | + | tig0031364:40807-40826 | Msa1446450:intergenic | 55.0% | |
| AGGTGTAAGCTGGTCGGAAG+TGG | + | tig0031364:40818-40837 | Msa1446450:intergenic | 55.0% | |
| CGACCAGCTTACACCTTCAC+TGG | - | tig0031364:40822-40841 | Msa1446450:CDS | 55.0% | |
| ! | TGCCCAGTGAAGGTGTAAGC+TGG | + | tig0031364:40828-40847 | Msa1446450:intergenic | 55.0% |
| CTAGCTACCTCAAGGGATCG+AGG | - | tig0031364:43144-43163 | Msa1446450:intron | 55.0% | |
| AGCTACCTCAAGGGATCGAG+GGG | - | tig0031364:43146-43165 | Msa1446450:intron | 55.0% | |
| CAAATCCCCTCGATCCCTTG+AGG | + | tig0031364:43154-43173 | Msa1446450:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031364 | gene | 40464 | 44295 | 40464 | ID=Msa1446450;Name=Msa1446450 |
| tig0031364 | mRNA | 40464 | 44295 | 40464 | ID=Msa1446450-mRNA-1;Parent=Msa1446450;Name=Msa1446450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=114|1|1|1|1|1|2|346|363 |
| tig0031364 | exon | 40464 | 41430 | 40464 | ID=Msa1446450-mRNA-1:exon:15428;Parent=Msa1446450-mRNA-1 |
| tig0031364 | exon | 43711 | 44295 | 43711 | ID=Msa1446450-mRNA-1:exon:15427;Parent=Msa1446450-mRNA-1 |
| tig0031364 | five_prime_UTR | 44182 | 44295 | 44182 | ID=Msa1446450-mRNA-1:five_prime_utr;Parent=Msa1446450-mRNA-1 |
| tig0031364 | CDS | 43711 | 44181 | 43711 | ID=Msa1446450-mRNA-1:cds;Parent=Msa1446450-mRNA-1 |
| tig0031364 | CDS | 40810 | 41430 | 40810 | ID=Msa1446450-mRNA-1:cds;Parent=Msa1446450-mRNA-1 |
| tig0031364 | three_prime_UTR | 40464 | 40809 | 40464 | ID=Msa1446450-mRNA-1:three_prime_utr;Parent=Msa1446450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
