AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1457980


Find 316 sgRNAs with CRISPR-Local

Find 1190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
tig0039299 gene 128 18449 128 ID=Msa1457980;Name=Msa1457980
tig0039299 mRNA 128 18449 128 ID=Msa1457980-mRNA-1;Parent=Msa1457980;Name=Msa1457980-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0.60|0.52|1|0.93|0.91|34|0|1340
tig0039299 exon 128 349 128 ID=Msa1457980-mRNA-1:exon:21517;Parent=Msa1457980-mRNA-1
tig0039299 exon 1394 1523 1394 ID=Msa1457980-mRNA-1:exon:21518;Parent=Msa1457980-mRNA-1
tig0039299 exon 1912 2008 1912 ID=Msa1457980-mRNA-1:exon:21519;Parent=Msa1457980-mRNA-1
tig0039299 exon 2269 2389 2269 ID=Msa1457980-mRNA-1:exon:21520;Parent=Msa1457980-mRNA-1
tig0039299 exon 2513 2545 2513 ID=Msa1457980-mRNA-1:exon:21521;Parent=Msa1457980-mRNA-1
tig0039299 exon 3697 3747 3697 ID=Msa1457980-mRNA-1:exon:21522;Parent=Msa1457980-mRNA-1
tig0039299 exon 3835 3930 3835 ID=Msa1457980-mRNA-1:exon:21523;Parent=Msa1457980-mRNA-1
tig0039299 exon 4055 4156 4055 ID=Msa1457980-mRNA-1:exon:21524;Parent=Msa1457980-mRNA-1
tig0039299 exon 4662 4784 4662 ID=Msa1457980-mRNA-1:exon:21525;Parent=Msa1457980-mRNA-1
tig0039299 exon 6158 6289 6158 ID=Msa1457980-mRNA-1:exon:21526;Parent=Msa1457980-mRNA-1
tig0039299 exon 6540 6611 6540 ID=Msa1457980-mRNA-1:exon:21527;Parent=Msa1457980-mRNA-1
tig0039299 exon 6703 6778 6703 ID=Msa1457980-mRNA-1:exon:21528;Parent=Msa1457980-mRNA-1
tig0039299 exon 6856 6998 6856 ID=Msa1457980-mRNA-1:exon:21529;Parent=Msa1457980-mRNA-1
tig0039299 exon 7073 7181 7073 ID=Msa1457980-mRNA-1:exon:21530;Parent=Msa1457980-mRNA-1
tig0039299 exon 7265 7452 7265 ID=Msa1457980-mRNA-1:exon:21531;Parent=Msa1457980-mRNA-1
tig0039299 exon 8577 8666 8577 ID=Msa1457980-mRNA-1:exon:21532;Parent=Msa1457980-mRNA-1
tig0039299 exon 8806 8988 8806 ID=Msa1457980-mRNA-1:exon:21533;Parent=Msa1457980-mRNA-1
tig0039299 exon 9154 9330 9154 ID=Msa1457980-mRNA-1:exon:21534;Parent=Msa1457980-mRNA-1
tig0039299 exon 10131 10187 10131 ID=Msa1457980-mRNA-1:exon:21535;Parent=Msa1457980-mRNA-1
tig0039299 exon 12454 12574 12454 ID=Msa1457980-mRNA-1:exon:21536;Parent=Msa1457980-mRNA-1
tig0039299 exon 12856 13094 12856 ID=Msa1457980-mRNA-1:exon:21537;Parent=Msa1457980-mRNA-1
tig0039299 exon 13365 13505 13365 ID=Msa1457980-mRNA-1:exon:21538;Parent=Msa1457980-mRNA-1
tig0039299 exon 13986 14132 13986 ID=Msa1457980-mRNA-1:exon:21539;Parent=Msa1457980-mRNA-1
tig0039299 exon 14394 14546 14394 ID=Msa1457980-mRNA-1:exon:21540;Parent=Msa1457980-mRNA-1
tig0039299 exon 15133 15262 15133 ID=Msa1457980-mRNA-1:exon:21541;Parent=Msa1457980-mRNA-1
tig0039299 exon 15610 15706 15610 ID=Msa1457980-mRNA-1:exon:21542;Parent=Msa1457980-mRNA-1
tig0039299 exon 15964 16084 15964 ID=Msa1457980-mRNA-1:exon:21543;Parent=Msa1457980-mRNA-1
tig0039299 exon 16282 16341 16282 ID=Msa1457980-mRNA-1:exon:21544;Parent=Msa1457980-mRNA-1
tig0039299 exon 16472 16522 16472 ID=Msa1457980-mRNA-1:exon:21545;Parent=Msa1457980-mRNA-1
tig0039299 exon 16617 16712 16617 ID=Msa1457980-mRNA-1:exon:21546;Parent=Msa1457980-mRNA-1
tig0039299 exon 16984 17073 16984 ID=Msa1457980-mRNA-1:exon:21547;Parent=Msa1457980-mRNA-1
tig0039299 exon 17219 17401 17219 ID=Msa1457980-mRNA-1:exon:21548;Parent=Msa1457980-mRNA-1
tig0039299 exon 17683 17802 17683 ID=Msa1457980-mRNA-1:exon:21549;Parent=Msa1457980-mRNA-1
tig0039299 exon 18378 18449 18378 ID=Msa1457980-mRNA-1:exon:21550;Parent=Msa1457980-mRNA-1
tig0039299 CDS 128 349 128 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 1394 1523 1394 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 1912 2008 1912 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 2269 2389 2269 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 2513 2545 2513 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 3697 3747 3697 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 3835 3930 3835 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 4055 4156 4055 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 4662 4784 4662 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 6158 6289 6158 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 6540 6611 6540 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 6703 6778 6703 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 6856 6998 6856 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 7073 7181 7073 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 7265 7452 7265 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 8577 8666 8577 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 8806 8988 8806 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 9154 9330 9154 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 10131 10187 10131 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 12454 12574 12454 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 12856 13094 12856 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 13365 13505 13365 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 13986 14132 13986 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 14394 14546 14394 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 15133 15262 15133 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 15610 15706 15610 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 15964 16084 15964 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 16282 16341 16282 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 16472 16522 16472 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 16617 16712 16617 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 16984 17073 16984 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 17219 17401 17219 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 17683 17802 17683 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
tig0039299 CDS 18378 18449 18378 ID=Msa1457980-mRNA-1:cds;Parent=Msa1457980-mRNA-1
Gene Sequence

>Msa1457980

AATCAGCATGCAAACTTTTTCTTTCCCCGTGAAGTCTTACCTTATATGTTTCTGTTTGTCTCACCACAGTTCAACAGGGAGGCTGACGGCTCTCTTAAATCCCTGCCTGCAAAGCATGTTGACACTGGAATGGGTTTTGAACGACTGACCTCTATACTGCAGAGGAAGTTGAGCAACTATGACACTGATGTCTTCATGCCTATCTTCGATGCTATTCAGCTGGCAACTGGTGCTCGGCCATATTCTGGGAAAGTTGGACCAGAAGATGCTGATAAAATTGACATGGCATACAGGGTTGTTGCAGATCACATCAGGACTCTGTCATTTGCCATTGCTGATGGGTCTCGTCCTGGTAATGAAGGTCGTGAGTATGTTCTGAGGCGTATACTCCGTCGAGCTGTTCGGTATGGTCGGGAAGTGCTAAAGGCTGAAGAGGGTTTTTTCAATGGGCTTGTAAATGTTGTGGCAAATGTGCTGGGTGATGTTTTCCCCGAGCTAAAACAACAGGAAGTGCACATTAGGAATGTGATTCAAGAGGAAGAGGAAAGTTTCGGCAGAACCTTAGTTAAGGGCATTGCAAAATTTAAAACAGCTGTTGGACATGTAGCGTTTGAGTTGTGGGATACATATGGCTTCCCATTGGACCTCACACAGCTAATGGCTGAAGAGAAGAAATTACATGTCGATGTCGAAGGTTTTAATAGTGCTATGGAAGCAGCACGAGAAAGATCAAGAACTGCTCAAAATAAGCAAGCTGGTGGTGCTATTGTCATGGATGCTGATGCTACATCAGCATTGCAGAAAAGAAGCATCGCTCCAACAGATGATAATTTCAAATTTGCTTGGTTCAGGGACCATGAGAGTGTGGTAAAAGCAATATATACTGGTTCTGAGTTTGTTGATTCAGTTAATACTGATGGTGATGTTGGTGTAATTCTGGAATCTACAAGCTTCTATGCTGAGCAAGGTGGTCAGATTTTTGATACCGGGTCTCTTGATTTCCAACATGCTTCATTTCAAGTTCATAACGTTCAAGTTTATGGAGGTTTCGTGCTTCACATTGGTAATGGGACTGGTATCTCTGTTGGCGACAAAGTAGTATGCAAGGTCGATTATGGAAGACGTGCCCTTATAGCCCCTAATCATACATGCACACACATGTTAAATTTTGCTCTTAGGGAAGTACTTGGCAATCATGTAGACCAGAAAGGATCTATCGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCACGGCAAGCCTGTTGATGCTGATTCATTAAGGAGAATCGAGTCAATTGTTAATGAGCAAATTCAAGCTGAATTGGATGTAAATGCAAAGGAGGTAACTCTTGCCGATGCCAAGCGTATCAAGGGTCTGCGAGCTGTTTTTGGAGAAGTCTATCCTGATCCGGTTAGAGTTGTGTCAGTTGGACAAAAAGTTGAAGATCTCCTTGCTGACCCTGATAACGAAAAATGGTTATCTATTTCATCTGAATTGTGTGGTGGTACCCATATCTCAAACACACGAGAGGCTAAAGCTTTTGCACTTTTAGCTGAGGAGGGAATTGCTAAAGGAATCCGTAGAATAACAGCTGTCACAACTGATCGTGCTTCTGATGCAATGAAAATGGCAGATGACTTTGAGAAGCAAGTAGATGAAGCGGCTAAGCTAGAAGGAAGTTTGCTGGAAGAGAAAGTTTCATCTTTGAAAAGCAATGTGGAAACATTATCAATTCCTGCAGCTAAGAAAGCTGAAATTAAGACCAAGATTGCCCTACTTCAGGATCAAGTGAGAAAAGCGCAAAAGCGTGTTGCTGAAGAAAACAAACGTAAAGCTGTAACGTTAACAGCTGAGAAGGCTGATCTAGCTGTTTCAGATGGGAAATCTTACTGCATATCTCACGTTAATGTTGGGCTCGATGTTGCAGCAGTTCGTGAGGCTGTTACAAAAGTCATTGATCAGAAGGGATTGTCAGTGATGGTTTTTAGCACTGATGAATCTACAAACAAAGCTGTAGTGTGTGCTGGGGTGCCGGAGAAAGGAGATAAAGGTAAGCTGGATGTATCAGAATGGCTGAGTAATGCTTTGGGGCCACTGAAAGGGAGATGTGGTAAAGGAAAAGGAGGTCTTGCAACGGGACAGGGTACAGATGCCTCACACGTAAATGAGGCTATGGATCTTGCAGTGAAATTTGCATCCTGGCCGGCAAAGCGCGTCAGAGACACGTTCGTGAAGTTCTTCGAAGAGAAGAATCATGTCCATTGGAAGTCTAGCCCTGTCGTTCCTCTCAATGACCCTACTCTGCTCTTTGCTAACGCCGGGATGAATCAGTTCAAGCCAATTTTTTTGGGGACTGTTGATCCTAACACCGCTGTGAGCAAACTCACTCGTGCCTGCAATACCCAGAAGTGTATCCGAGCTGGTGGTAAGCACAATGATCTTGACGATGTGGGGAAGGACACTTACCATCACACCTTCTTCGAGATGCTGGGTAACTGGTCCTTTAACGACTACTTTAAAGAAGAAGCCATTAGCTGGGCATGGGAGCTTCTTACAGAAGTGTATAAATTACCGTCGGATCGTATTTATGTTACATATTTTGGTGGTGATGAGAAAACTGGTCTTGGCCCTGACAATGAAGCTAGAGATATATGGTTAAAGTTTTTGCCTCCTGGACGCGTTCTTCCTTTTGGTAGTAAAGACAATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGACCTTGCTCGGAAATACATTTTGATAGAGTTGGTAACCGCGACGCTGCATCTTTTGTAAATGATGACGACCCTAACTGCATGGAGATATGGAACCTTGTCTTTATTCAGTTCAATAGGGAGGCTGACGGCTCTCTTAAATCTCTGCCTGCAAAGCATGTTGACACGGGCATGGGTTTTGAACGACTGACCTCTATACTGCAGCATAAAAATAGCAACTATGACACAGATGTCTTCGTGCCTATCTTCGATGCTATTCAGCAGGCAACTGGTGCTCGGCCATACTCTGGGAAAGTTGGACCAGAGGATGCAGATAAAGTTGACATGGCATACAGGGTTGTTGCAGATCACATCAGGACTCTGTCAATTGCCATTGCTGATGGATCTCAACCTGGTAATGTTGGTCGTGAGTATGTTCTGAGGCGTATACTCCGTCGAGCAGTTCGGTATGGACGTGAAGTGCTAAGAGCTGAAGAGGGTTTTTTCAATGGGCTTGTAAGTGTTGTGGCAAATGTGCTGGGTGATATTTTCCCCGAGCTAAAACAAAGTGAAGAGCGAATTAGGAAGATGATTCAAGTGGAGGAGGAAAGTTTCAGCAGAAACTTGTTTAAGGGCATCAGAAAATTTAACAAAGCGGTTGAACATGTTCAGGGAAATATACTGAGCGGGGAGGTAGCGTTTGAGTTGTCCGATACATTTGGGTTCCCATTAGATCTCACACAGCTTATGGCTGAAGAGAAGAAACTAAAAGTCGACGTCGAAGGTTTTCATCGTGCTATGAAAGCCGCGAGGGAAAGGTCAAAAACTGCTCCAAAGAAGAAAGTTTCGTCTCTGAAAAGCAACATGGAAACATTATCGATTCCTGCAGCAGAGAAAGCTGAAAACAAGATCGAGATAACCCTACCTCAGGATCAAATGAGAAAAGCACAAAAGCATGTTGCCGAAGAAAACAAACGTAAAGCTCTAATGATAACTACCGAGAAGGCAGACCTAGCTGTTTCAGACGCTAAATCTTTTTGCATATCTCACGTTGATGTTGGCCTGGATGTTGCAGCAATTCGTGAGGCTGTAAAAAAAGTCATTGATCAGAAGTTTGTGCTGGGGTGCCGGAGGAGATCAAGGCAACTGGATGTATCAGAATGGCTGAGTAATGCCTTGGGGCCACTGAAAGGGAGATGTGGTAAAGGAAAAGGAGGTCTTGCAACGGGTCAGGGCACAGATGCATCACACTTAAATGAGGCTATGGGTCTTGCTGTGAAATTTGCATCGGTGAAATTGACTTAA

Protein sequence

>Msa1457980

NQHANFFFPREVLPYMFLFVSPQFNREADGSLKSLPAKHVDTGMGFERLTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVGPEDADKIDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEGFFNGLVNVVANVLGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVAFELWDTYGFPLDLTQLMAEEKKLHVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQKRSIAPTDDNFKFAWFRDHESVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQIFDTGSLDFQHASFQVHNVQVYGGFVLHIGNGTGISVGDKVVCKVDYGRRALIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDADSLRRIESIVNEQIQAELDVNAKEVTLADAKRIKGLRAVFGEVYPDPVRVVSVGQKVEDLLADPDNEKWLSISSELCGGTHISNTREAKAFALLAEEGIAKGIRRITAVTTDRASDAMKMADDFEKQVDEAAKLEGSLLEEKVSSLKSNVETLSIPAAKKAEIKTKIALLQDQVRKAQKRVAEENKRKAVTLTAEKADLAVSDGKSYCISHVNVGLDVAAVREAVTKVIDQKGLSVMVFSTDESTNKAVVCAGVPEKGDKGKLDVSEWLSNALGPLKGRCGKGKGGLATGQGTDASHVNEAMDLAVKFASWPAKRVRDTFVKFFEEKNHVHWKSSPVVPLNDPTLLFANAGMNQFKPIFLGTVDPNTAVSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFNDYFKEEAISWAWELLTEVYKLPSDRIYVTYFGGDEKTGLGPDNEARDIWLKFLPPGRVLPFGSKDNFWEMGDTGPCGPCSEIHFDRVGNRDAASFVNDDDPNCMEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERLTSILQHKNSNYDTDVFVPIFDAIQQATGARPYSGKVGPEDADKVDMAYRVVADHIRTLSIAIADGSQPGNVGREYVLRRILRRAVRYGREVLRAEEGFFNGLVSVVANVLGDIFPELKQSEERIRKMIQVEEESFSRNLFKGIRKFNKAVEHVQGNILSGEVAFELSDTFGFPLDLTQLMAEEKKLKVDVEGFHRAMKAARERSKTAPKKKVSSLKSNMETLSIPAAEKAENKIEITLPQDQMRKAQKHVAEENKRKALMITTEKADLAVSDAKSFCISHVDVGLDVAAIREAVKKVIDQKFVLGCRRRSRQLDVSEWLSNALGPLKGRCGKGKGGLATGQGTDASHLNEAMGLAVKFASVKLT*