AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000411.t1 MTR_8g096050 99.406 505 3 0 1 505 1 505 0.0 1039
MS.gene000411.t1 MTR_3g098460 79.830 471 95 0 35 505 13 483 0.0 800
MS.gene000411.t1 MTR_7g084400 72.464 483 120 3 31 505 11 488 0.0 740
MS.gene000411.t1 MTR_7g084400 69.118 408 119 4 31 434 11 415 0.0 590
MS.gene000411.t1 MTR_7g084400 31.319 182 118 3 321 500 207 383 3.15e-19 90.5
MS.gene000411.t1 MTR_5g009500 38.436 307 162 8 225 505 36 341 1.59e-59 200
MS.gene000411.t1 MTR_8g027975 36.013 311 166 8 225 505 49 356 1.40e-58 198
MS.gene000411.t1 MTR_3g107510 37.410 278 170 2 225 502 120 393 7.84e-54 186
MS.gene000411.t1 MTR_1g012030 38.129 278 168 2 225 502 137 410 1.31e-53 186
MS.gene000411.t1 MTR_4g114320 38.351 279 166 4 225 502 121 394 3.72e-53 184
MS.gene000411.t1 MTR_4g114320 27.304 293 180 9 220 500 24 295 1.12e-20 94.4
MS.gene000411.t1 MTR_3g104600 32.237 304 173 7 227 504 35 331 4.39e-47 167
MS.gene000411.t1 MTR_6g091800 32.051 312 189 6 211 504 2 308 4.84e-45 160
MS.gene000411.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 2.90e-25 106
MS.gene000411.t1 MTR_7g064980 32.119 302 169 7 227 503 25 315 3.87e-44 158
MS.gene000411.t1 MTR_7g064980 30.693 202 125 4 311 500 15 213 4.27e-23 100
MS.gene000411.t1 MTR_7g064980 27.753 227 150 5 187 406 98 317 2.09e-19 89.4
MS.gene000411.t1 MTR_6g091800 30.240 334 186 7 211 502 2 330 1.42e-42 155
MS.gene000411.t1 MTR_2g436930 30.820 305 171 7 229 496 17 318 7.19e-39 144
MS.gene000411.t1 MTR_2g436930 31.088 193 116 3 323 500 17 207 1.24e-21 96.3
MS.gene000411.t1 MTR_2g436930 26.341 205 127 6 220 401 119 322 2.10e-13 71.6
MS.gene000411.t1 MTR_5g081150 32.423 293 176 7 227 502 34 321 1.30e-36 138
MS.gene000411.t1 MTR_5g081150 33.696 184 112 5 226 402 140 320 1.39e-15 78.2
MS.gene000411.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 1.63e-15 78.2
MS.gene000411.t1 MTR_6g091800 32.283 254 151 5 211 448 2 250 2.33e-36 136
MS.gene000411.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.96e-25 105
MS.gene000411.t1 MTR_4g119770 29.936 314 178 7 229 503 16 326 4.39e-36 137
MS.gene000411.t1 MTR_4g119770 25.121 207 129 6 219 401 119 323 1.45e-13 72.0
MS.gene000411.t1 MTR_6g091800 29.114 316 177 7 211 484 2 312 5.80e-36 136
MS.gene000411.t1 MTR_6g091800 32.400 250 148 5 211 444 2 246 2.61e-35 133
MS.gene000411.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.89e-25 105
MS.gene000411.t1 MTR_7g109135 32.646 291 171 8 229 502 24 306 2.71e-35 134
MS.gene000411.t1 MTR_6g034145 31.250 256 157 4 263 504 4 254 5.45e-35 132
MS.gene000411.t1 MTR_6g034145 33.784 148 86 3 369 505 12 158 3.20e-19 87.8
MS.gene000411.t1 MTR_6g091800 29.856 278 150 6 211 448 2 274 3.63e-34 130
MS.gene000411.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.31e-22 97.1
MS.gene000411.t1 MTR_6g092210 30.645 248 159 4 263 502 4 246 2.03e-33 127
MS.gene000411.t1 MTR_6g092210 31.690 142 91 2 369 505 12 152 3.39e-16 79.0
MS.gene000411.t1 MTR_7g068340 29.412 272 168 7 238 500 98 354 2.42e-33 130
MS.gene000411.t1 MTR_7g068340 32.749 171 102 3 337 502 103 265 6.82e-20 92.0
MS.gene000411.t1 MTR_7g068340 25.862 174 122 2 229 402 189 355 9.34e-17 82.4
MS.gene000411.t1 MTR_6g091800 29.927 274 147 6 211 444 2 270 3.87e-33 127
MS.gene000411.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.59e-22 96.7
MS.gene000411.t1 MTR_3g074490 33.775 302 172 7 224 505 113 406 4.86e-33 130
MS.gene000411.t1 MTR_3g074490 25.269 186 131 3 316 501 111 288 6.19e-12 67.8
MS.gene000411.t1 MTR_1g087840 31.317 281 168 7 239 502 31 303 1.38e-32 127
MS.gene000411.t1 MTR_8g076760 34.875 281 161 7 243 504 30 307 7.92e-32 124
MS.gene000411.t1 MTR_8g090210 32.039 309 180 10 218 505 101 400 8.53e-32 126
MS.gene000411.t1 MTR_4g005330 29.276 304 169 10 225 499 64 350 2.17e-31 124
MS.gene000411.t1 MTR_4g005330 28.235 170 114 3 237 402 187 352 1.03e-11 67.0
MS.gene000411.t1 MTR_3g104500 26.885 305 199 6 218 504 25 323 1.00e-30 122
MS.gene000411.t1 MTR_4g005330 28.904 301 168 10 228 499 1 284 8.58e-30 118
MS.gene000411.t1 MTR_4g005330 28.235 170 114 3 237 402 121 286 1.94e-11 65.5
MS.gene000411.t1 MTR_7g109135 30.584 291 170 9 229 502 24 299 3.22e-29 117
MS.gene000411.t1 MTR_7g109135 33.191 235 140 6 277 502 2 228 3.64e-29 115
MS.gene000411.t1 MTR_4g016730 31.034 290 159 8 227 500 89 353 6.17e-29 118
MS.gene000411.t1 MTR_1g095780 23.673 452 314 13 57 503 360 785 2.88e-27 116
MS.gene000411.t1 MTR_4g012850 27.798 277 191 5 225 496 14 286 3.51e-27 111
MS.gene000411.t1 MTR_4g012850 28.497 193 122 7 317 502 11 194 9.85e-12 66.2
MS.gene000411.t1 MTR_2g436930 30.870 230 136 6 287 496 2 228 7.74e-27 108
MS.gene000411.t1 MTR_2g436930 26.214 206 128 6 219 401 28 232 6.68e-14 71.6
MS.gene000411.t1 MTR_5g055410 32.740 281 164 9 239 502 33 305 2.09e-26 110
MS.gene000411.t1 MTR_5g055410 28.947 190 114 6 239 413 131 314 3.16e-12 68.6
MS.gene000411.t1 MTR_7g109135 33.645 214 125 6 298 502 2 207 4.31e-26 106
MS.gene000411.t1 MTR_8g107270 27.143 280 184 6 227 490 18 293 4.51e-25 105
MS.gene000411.t1 MTR_6g091910 30.457 197 121 4 318 502 16 208 6.40e-25 102
MS.gene000411.t1 MTR_6g091910 26.316 209 132 6 211 401 2 206 1.60e-15 75.9
MS.gene000411.t1 MTR_4g119770 29.435 248 142 5 229 446 16 260 8.38e-25 103
MS.gene000411.t1 MTR_4g119770 29.048 210 126 4 308 500 5 208 3.18e-21 93.6
MS.gene000411.t1 MTR_3g025800 27.864 323 196 8 214 503 14 332 1.59e-24 105
MS.gene000411.t1 MTR_8g098240 26.644 289 202 4 218 505 311 590 3.40e-22 100
MS.gene000411.t1 MTR_5g073040 29.000 300 187 11 214 499 24 311 1.67e-21 95.9
MS.gene000411.t1 MTR_5g073040 28.962 183 122 2 321 503 39 213 5.93e-20 91.3
MS.gene000411.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 2.86e-21 93.6
MS.gene000411.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.65e-16 78.6
MS.gene000411.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 4.77e-21 92.8
MS.gene000411.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.28e-16 78.6
MS.gene000411.t1 MTR_6g034515 28.464 267 170 7 243 499 83 338 6.61e-21 94.7
MS.gene000411.t1 MTR_2g102010 27.915 283 198 3 225 503 15 295 6.75e-21 93.6
MS.gene000411.t1 MTR_1g097890 27.698 278 173 6 228 502 52 304 2.07e-20 92.4
MS.gene000411.t1 MTR_3g028590 28.028 289 170 9 227 490 93 368 2.84e-20 93.2
MS.gene000411.t1 MTR_3g028590 28.028 289 170 9 227 490 97 372 3.04e-20 93.2
MS.gene000411.t1 MTR_8g092080 29.032 279 168 7 228 502 53 305 1.22e-19 90.1
MS.gene000411.t1 MTR_6g091800 33.333 171 101 4 318 477 16 184 2.21e-19 86.3
MS.gene000411.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 7.41e-19 85.1
MS.gene000411.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 9.39e-19 85.1
MS.gene000411.t1 MTR_6g091800 29.231 195 101 4 318 477 16 208 4.54e-16 77.4
MS.gene000411.t1 MTR_1g105410 29.431 299 172 13 229 501 13 298 2.06e-18 86.7
MS.gene000411.t1 MTR_8g036880 26.667 285 180 7 227 490 102 378 5.27e-18 86.3
MS.gene000411.t1 MTR_4g018750 28.231 294 178 10 227 500 15 295 1.10e-17 84.3
MS.gene000411.t1 MTR_1g090330 30.168 179 113 5 310 481 4 177 1.96e-17 83.6
MS.gene000411.t1 MTR_1g090330 24.468 282 195 6 232 500 19 295 2.20e-16 80.1
MS.gene000411.t1 MTR_5g081910 26.296 270 155 10 266 498 53 315 2.70e-17 83.6
MS.gene000411.t1 MTR_8g066975 26.578 301 180 7 229 502 10 296 2.84e-17 82.8
MS.gene000411.t1 MTR_8g066975 28.426 197 121 7 321 502 8 199 1.78e-13 71.6
MS.gene000411.t1 MTR_4g078545 27.465 284 178 9 227 490 75 350 3.91e-17 83.6
MS.gene000411.t1 MTR_5g081910 29.245 212 119 8 314 498 34 241 8.30e-17 80.9
MS.gene000411.t1 MTR_1g088995 26.573 286 197 7 226 505 32 310 2.94e-16 80.1
MS.gene000411.t1 MTR_5g030530 26.910 301 189 8 224 502 5 296 4.48e-16 79.3
MS.gene000411.t1 MTR_2g098070 27.500 280 183 7 227 490 66 341 6.36e-16 79.7
MS.gene000411.t1 MTR_7g117030 25.098 255 171 7 266 503 85 336 2.44e-15 77.8
MS.gene000411.t1 MTR_7g066690 26.846 298 177 9 227 500 17 297 4.42e-15 76.3
MS.gene000411.t1 MTR_1g036280 25.168 298 166 10 260 504 64 357 1.28e-14 75.9
MS.gene000411.t1 MTR_2g032610 26.190 294 192 11 223 496 25 313 1.74e-14 74.7
MS.gene000411.t1 MTR_2g032610 26.804 194 125 3 224 400 123 316 5.48e-12 67.4
MS.gene000411.t1 MTR_4g057850 23.841 302 212 8 209 498 4 299 2.93e-14 73.9
MS.gene000411.t1 MTR_6g015860 23.377 308 208 8 214 500 4 304 3.85e-14 73.9
MS.gene000411.t1 MTR_6g015860 26.857 175 121 4 333 502 29 201 5.24e-13 70.5
MS.gene000411.t1 MTR_1g088995 28.846 156 104 3 325 479 37 186 1.05e-13 71.2
MS.gene000411.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 2.71e-13 70.1
MS.gene000411.t1 MTR_7g015870 22.330 309 198 9 220 500 18 312 3.20e-13 70.9
MS.gene000411.t1 MTR_7g015870 28.571 210 127 7 214 405 112 316 1.48e-12 68.9
MS.gene000411.t1 MTR_4g094578 23.404 282 197 9 227 499 29 300 3.41e-13 70.9
MS.gene000411.t1 MTR_1g026190 29.861 144 91 3 56 194 388 526 4.16e-13 72.0
MS.gene000411.t1 MTR_8g086070 31.325 166 102 5 324 485 24 181 5.19e-13 68.6
MS.gene000411.t1 MTR_6g033280 28.436 211 142 5 228 432 64 271 5.35e-13 70.9
MS.gene000411.t1 MTR_6g033280 25.281 178 122 4 324 498 66 235 7.99e-11 63.9
MS.gene000411.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 7.86e-13 69.3
MS.gene000411.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 1.30e-12 68.9
MS.gene000411.t1 MTR_7g015870 22.549 306 195 9 223 500 17 308 1.34e-12 69.3
MS.gene000411.t1 MTR_7g015870 28.708 209 126 7 214 404 108 311 2.98e-12 68.2
MS.gene000411.t1 MTR_4g132070 28.302 159 106 4 41 192 381 538 3.47e-12 68.9
MS.gene000411.t1 MTR_7g083790 30.734 218 136 7 229 435 83 296 3.47e-12 68.6
MS.gene000411.t1 MTR_3g462140 24.839 310 185 9 219 500 7 296 6.96e-12 66.6
MS.gene000411.t1 MTR_4g018750 27.481 262 157 10 227 468 15 263 9.99e-12 66.2
MS.gene000411.t1 MTR_3g090820 23.846 260 175 7 264 503 132 388 1.64e-11 66.6
MS.gene000411.t1 MTR_8g099910 27.602 221 139 6 229 435 74 287 1.82e-11 66.2
MS.gene000411.t1 MTR_8g099910 28.042 189 113 7 317 498 73 245 4.72e-11 64.7
MS.gene000411.t1 MTR_5g039730 27.241 290 182 10 229 498 13 293 1.97e-11 65.5
MS.gene000411.t1 MTR_5g009830 30.370 135 88 3 50 179 366 499 2.05e-11 66.6
MS.gene000411.t1 MTR_1g095780 24.016 254 164 8 57 289 360 605 4.54e-11 65.9
MS.gene000411.t1 MTR_4g132040 32.414 145 87 5 56 192 401 542 9.52e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000411.t1 AT5G51050 74.349 499 121 3 9 505 5 498 0.0 768
MS.gene000411.t1 AT5G07320 75.158 475 110 2 31 505 13 479 0.0 748
MS.gene000411.t1 AT5G61810 68.763 477 139 4 30 505 11 478 0.0 689
MS.gene000411.t1 AT5G61810 70.640 344 91 4 163 505 1 335 1.03e-177 503
MS.gene000411.t1 AT4G01100 38.462 312 157 8 225 505 40 347 9.73e-63 209
MS.gene000411.t1 AT4G01100 35.411 353 169 11 204 505 17 361 7.05e-60 201
MS.gene000411.t1 AT4G01100 38.333 300 150 8 237 505 2 297 3.85e-59 197
MS.gene000411.t1 AT4G01100 25.714 175 125 1 330 499 1 175 1.72e-18 86.7
MS.gene000411.t1 AT4G01100 28.365 208 121 5 229 410 97 302 2.65e-14 73.9
MS.gene000411.t1 AT4G32400 36.918 279 170 3 225 502 112 385 2.51e-52 182
MS.gene000411.t1 AT4G32400 30.366 191 130 3 214 402 195 384 1.13e-17 85.5
MS.gene000411.t1 AT3G53940 35.274 292 171 6 227 503 73 361 4.28e-46 165
MS.gene000411.t1 AT3G53940 32.367 207 126 6 302 499 57 258 2.09e-21 96.3
MS.gene000411.t1 AT3G53940 29.060 234 133 6 176 402 152 359 5.81e-21 94.7
MS.gene000411.t1 AT4G26180 31.229 301 180 6 224 504 18 311 1.24e-44 160
MS.gene000411.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene000411.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene000411.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene000411.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene000411.t1 AT1G14560 31.930 285 166 8 238 499 38 317 8.69e-41 150
MS.gene000411.t1 AT1G14560 29.412 187 111 4 332 502 38 219 1.50e-19 90.1
MS.gene000411.t1 AT2G37890 31.757 296 174 6 227 502 45 332 2.45e-40 149
MS.gene000411.t1 AT2G37890 34.518 197 118 4 312 499 36 230 1.12e-24 105
MS.gene000411.t1 AT2G37890 35.326 184 109 5 226 402 151 331 6.27e-24 103
MS.gene000411.t1 AT4G26180 30.824 279 170 5 224 484 18 291 6.53e-39 143
MS.gene000411.t1 AT4G26180 32.663 199 115 4 318 502 18 211 3.55e-25 105
MS.gene000411.t1 AT3G21390 30.293 307 172 7 229 496 21 324 9.39e-36 136
MS.gene000411.t1 AT3G21390 29.319 191 120 3 323 500 21 209 3.22e-20 92.4
MS.gene000411.t1 AT3G21390 30.293 307 172 7 229 496 43 346 1.15e-35 136
MS.gene000411.t1 AT3G21390 29.319 191 120 3 323 500 43 231 4.51e-20 92.0
MS.gene000411.t1 AT1G14560 31.111 270 158 8 238 484 38 302 7.54e-35 133
MS.gene000411.t1 AT1G14560 29.412 187 111 4 332 502 38 219 7.62e-20 90.5
MS.gene000411.t1 AT5G64970 31.562 320 185 8 209 505 117 425 2.38e-34 134
MS.gene000411.t1 AT5G66380 33.677 291 174 6 229 502 12 300 3.55e-34 131
MS.gene000411.t1 AT3G51870 30.515 272 165 7 238 500 102 358 3.57e-34 133
MS.gene000411.t1 AT3G51870 30.409 171 106 3 337 502 107 269 1.28e-17 85.1
MS.gene000411.t1 AT3G51870 26.136 176 119 3 229 402 193 359 2.78e-14 75.1
MS.gene000411.t1 AT5G01500 31.868 273 160 9 238 500 130 386 3.22e-33 130
MS.gene000411.t1 AT5G01500 32.749 171 102 3 337 502 135 297 1.37e-19 91.3
MS.gene000411.t1 AT5G01500 29.310 174 116 2 229 402 221 387 2.71e-13 72.0
MS.gene000411.t1 AT5G64970 32.226 301 170 8 228 505 12 301 6.75e-33 127
MS.gene000411.t1 AT5G48970 29.545 308 174 8 229 496 24 328 2.51e-32 127
MS.gene000411.t1 AT5G48970 31.088 193 116 4 323 500 24 214 1.48e-20 93.2
MS.gene000411.t1 AT5G48970 26.190 210 124 6 220 401 126 332 1.55e-14 75.5
MS.gene000411.t1 AT3G20240 28.990 307 178 7 222 502 47 339 1.59e-29 119
MS.gene000411.t1 AT2G35800 23.395 483 335 12 23 502 355 805 5.97e-29 121
MS.gene000411.t1 AT2G47490 31.522 276 173 6 239 502 29 300 7.65e-29 116
MS.gene000411.t1 AT5G56450 26.073 303 198 6 222 503 29 326 9.38e-29 116
MS.gene000411.t1 AT1G78180 30.693 303 186 5 221 505 122 418 1.33e-28 118
MS.gene000411.t1 AT3G53940 35.321 218 125 5 227 431 73 287 2.33e-28 114
MS.gene000411.t1 AT3G53940 32.367 207 126 6 302 499 57 258 6.37e-22 96.3
MS.gene000411.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene000411.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene000411.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene000411.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene000411.t1 AT5G48970 30.000 260 156 7 260 496 1 257 2.57e-27 111
MS.gene000411.t1 AT5G48970 34.043 141 89 3 362 500 5 143 2.34e-17 82.4
MS.gene000411.t1 AT5G48970 26.190 210 124 6 220 401 55 261 3.16e-15 76.3
MS.gene000411.t1 AT5G64970 30.435 299 174 8 209 484 117 404 4.53e-27 113
MS.gene000411.t1 AT5G64970 28.649 185 124 3 315 499 129 305 1.16e-13 73.2
MS.gene000411.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene000411.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene000411.t1 AT1G14560 32.161 199 111 6 321 499 25 219 6.63e-26 106
MS.gene000411.t1 AT1G14560 27.966 118 69 2 401 502 4 121 1.16e-11 65.1
MS.gene000411.t1 AT1G14560 25.500 200 120 5 227 401 25 220 3.25e-11 63.9
MS.gene000411.t1 AT1G74240 27.476 313 182 6 225 502 34 336 2.07e-25 107
MS.gene000411.t1 AT1G74240 26.601 203 122 4 324 503 39 237 1.45e-14 75.5
MS.gene000411.t1 AT1G34065 28.669 293 171 9 220 503 73 336 1.46e-22 99.4
MS.gene000411.t1 AT1G34065 28.669 293 171 9 220 503 66 329 1.52e-22 99.0
MS.gene000411.t1 AT5G17400 28.669 293 183 8 217 490 4 289 1.91e-22 98.2
MS.gene000411.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene000411.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene000411.t1 AT2G30160 27.915 283 186 5 228 499 43 318 1.89e-21 95.9
MS.gene000411.t1 AT2G30160 27.322 183 123 4 321 502 42 215 3.18e-14 74.3
MS.gene000411.t1 AT1G74240 26.441 295 172 6 243 502 4 288 2.76e-21 95.1
MS.gene000411.t1 AT1G74240 25.521 192 116 4 335 503 2 189 1.57e-11 65.9
MS.gene000411.t1 AT1G14140 26.855 283 186 9 232 499 21 297 1.31e-20 92.8
MS.gene000411.t1 AT1G14140 27.746 173 117 4 317 481 12 184 6.23e-15 75.9
MS.gene000411.t1 AT1G07030 28.472 288 181 7 225 499 38 313 1.44e-20 93.2
MS.gene000411.t1 AT1G07030 27.473 182 124 2 321 502 40 213 1.72e-15 78.2
MS.gene000411.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene000411.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene000411.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene000411.t1 AT5G58970 26.990 289 188 6 227 500 16 296 4.21e-20 91.3
MS.gene000411.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene000411.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene000411.t1 AT3G54110 28.082 292 185 8 225 500 13 295 1.29e-18 87.0
MS.gene000411.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene000411.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene000411.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene000411.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene000411.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene000411.t1 AT5G42130 26.316 266 178 5 243 499 134 390 5.00e-17 83.6
MS.gene000411.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene000411.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene000411.t1 AT1G79900 24.621 264 191 2 233 496 22 277 4.63e-16 79.3
MS.gene000411.t1 AT1G79900 30.409 171 111 4 230 397 112 277 2.74e-14 73.9
MS.gene000411.t1 AT3G05290 27.703 296 175 12 229 498 13 295 1.79e-15 77.8
MS.gene000411.t1 AT2G39970 23.810 273 172 9 266 504 53 323 6.32e-15 76.3
MS.gene000411.t1 AT5G15640 24.013 304 207 7 217 500 11 310 1.50e-14 75.1
MS.gene000411.t1 AT5G27520 28.231 294 176 11 229 498 15 297 2.66e-14 74.3
MS.gene000411.t1 AT2G33820 25.249 301 192 11 227 504 18 308 3.58e-14 73.9
MS.gene000411.t1 AT5G26200 27.273 308 195 10 219 500 31 335 5.63e-14 73.6
MS.gene000411.t1 AT5G26200 28.378 222 132 8 210 405 119 339 3.09e-11 65.5
MS.gene000411.t1 AT5G01340 23.345 287 195 9 228 498 18 295 6.15e-14 73.2
MS.gene000411.t1 AT5G15640 23.826 298 203 7 223 500 24 317 7.25e-14 73.2
MS.gene000411.t1 AT2G26360 25.532 282 194 7 222 502 110 376 7.50e-14 73.6
MS.gene000411.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene000411.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene000411.t1 AT4G27940 24.506 253 169 5 266 499 155 404 1.01e-12 70.5
MS.gene000411.t1 AT3G48850 27.119 177 120 3 323 497 73 242 2.05e-12 68.9
MS.gene000411.t1 AT3G48850 29.258 229 146 7 220 435 60 285 2.53e-11 65.9
MS.gene000411.t1 AT4G04695 30.935 139 90 2 50 183 331 468 4.34e-12 68.6
MS.gene000411.t1 AT4G24570 23.750 320 189 9 225 502 4 310 4.48e-12 67.4
MS.gene000411.t1 AT2G33820 24.595 309 192 12 227 504 18 316 5.02e-12 67.4
MS.gene000411.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene000411.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene000411.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene000411.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene000411.t1 AT5G14040 26.344 186 122 5 318 498 79 254 7.27e-12 67.4
MS.gene000411.t1 AT5G14040 29.200 250 159 9 230 465 84 329 4.95e-11 65.1
MS.gene000411.t1 AT4G03115 23.860 285 191 7 226 499 69 338 2.85e-11 65.5
MS.gene000411.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.19e-11 66.2
MS.gene000411.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.37e-11 66.2
MS.gene000411.t1 AT4G03115 26.923 182 117 6 325 502 42 211 6.54e-11 62.8
MS.gene000411.t1 AT4G03115 23.860 285 191 7 226 499 37 306 6.77e-11 63.9
MS.gene000411.t1 AT4G03115 26.923 182 117 6 325 502 42 211 8.30e-11 62.4

Find 130 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTACTAATAAAGGGTATT+TGG 0.097879 4.3:+7303112 MS.gene000411:CDS
TGGCAACGAGACGGTTTATT+AGG 0.203876 4.3:+7305077 MS.gene000411:CDS
TTCTTTGACGCTACTAATAA+AGG 0.205124 4.3:+7303104 MS.gene000411:CDS
CTTGGATGTGGGACAGTTTC+GGG 0.228064 4.3:+7305656 MS.gene000411:CDS
GGCCTTGTTCCATCTCTTCT+TGG 0.236132 4.3:+7305404 MS.gene000411:CDS
GTCAGATATAATATATTTCT+TGG 0.259740 4.3:-7305483 None:intergenic
AGAAGTCGCCGGAGATGATT+TGG 0.282313 4.3:-7302964 None:intergenic
TTCAATGGATCATGTTCTAT+TGG 0.289968 4.3:+7303028 MS.gene000411:CDS
TCCTTAGCATATTTATATTC+AGG 0.292787 4.3:-7303179 None:intergenic
CTCGAAAGCCTTCGTCCTTA+AGG 0.303116 4.3:-7306322 None:intergenic
GGCACAACTTTGAGGAGATT+TGG 0.303845 4.3:-7306365 None:intergenic
CGCCGGAGATGATTTGGGTT+TGG 0.315050 4.3:-7302958 None:intergenic
TATTCTTCCTGAAGAACTTT+GGG 0.325825 4.3:+7303331 MS.gene000411:CDS
ACCCACGTGGTCCATGTCTA+TGG 0.340694 4.3:-7302931 None:intergenic
TTCATAAGCATAAAACTTGA+TGG 0.341735 4.3:-7305150 None:intergenic
ACTTGGATGTGGGACAGTTT+CGG 0.345888 4.3:+7305655 MS.gene000411:CDS
GAACCCTTACAAAGGATATA+TGG 0.347440 4.3:+7305351 MS.gene000411:CDS
TCGAAAGCCTTCGTCCTTAA+GGG 0.350475 4.3:-7306321 None:intergenic
CTTCATTACTGCTGGCATAA+TGG 0.353220 4.3:-7305051 None:intergenic
AACACAACAAAACACATGTC+TGG 0.372831 4.3:+7302906 None:intergenic
AGAGCATCCCAAAGTTCTTC+AGG 0.374338 4.3:-7303338 None:intergenic
TGCCATGCTTCTCAGGCTGC+AGG 0.378131 4.3:+7306241 MS.gene000411:intron
GGCAACGAGACGGTTTATTA+GGG 0.381008 4.3:+7305078 MS.gene000411:CDS
GCTATTGATGTTGAACATAA+TGG 0.381502 4.3:+7303305 MS.gene000411:CDS
CAACACTTCTAGTGCTTACA+AGG 0.382786 4.3:+7306274 MS.gene000411:CDS
GGATCCATATATCCTTTGTA+AGG 0.391902 4.3:-7305355 None:intergenic
TTTCTTGGATATATCTTTCA+AGG 0.392181 4.3:-7305468 None:intergenic
GTATTCTTCCTGAAGAACTT+TGG 0.396947 4.3:+7303330 MS.gene000411:CDS
ATGATCCATTGAAATTGAAC+CGG 0.400793 4.3:-7303018 None:intergenic
TATCCTTTGTAAGGGTTCCT+AGG 0.406046 4.3:-7305346 None:intergenic
AAAACCCGGTTCAATTTCAA+TGG 0.412723 4.3:+7303013 MS.gene000411:CDS
TCTTTGACGCTACTAATAAA+GGG 0.413870 4.3:+7303105 MS.gene000411:CDS
TGCCAGCAGTAATGAAGATA+TGG 0.415808 4.3:+7305057 MS.gene000411:CDS
GAAGTCGCCGGAGATGATTT+GGG 0.420586 4.3:-7302963 None:intergenic
CAAGGGAACAAGTCAGATAT+TGG 0.420941 4.3:+7305200 MS.gene000411:CDS
TTTGTAAGGGTTCCTAGGTT+CGG 0.421581 4.3:-7305341 None:intergenic
GGGACAGTTTCGGGAGCTCT+TGG 0.425562 4.3:+7305665 MS.gene000411:CDS
CTTTGTTGAGCATGTTGATA+AGG 0.428962 4.3:+7304758 MS.gene000411:CDS
AAGAAAGGGATGTTCGTATT+CGG 0.433508 4.3:+7303069 MS.gene000411:CDS
ACATGCTTGCTGATGCCTTC+AGG 0.436950 4.3:-7304915 None:intergenic
CATGTTGATAAGGATAATAA+TGG 0.437979 4.3:+7304768 MS.gene000411:CDS
TGCCATATCTTCATTACTGC+TGG 0.447668 4.3:-7305059 None:intergenic
CTTGGTATGATTCCTTATGC+AGG 0.448812 4.3:+7305422 MS.gene000411:CDS
TGAAAATATATATCAACATT+GGG 0.450630 4.3:+7304851 MS.gene000411:CDS
TTGCAGCCGGCACAACTTTG+AGG 0.450795 4.3:-7306373 None:intergenic
ACACAACAAAACACATGTCT+GGG 0.452954 4.3:+7302907 None:intergenic
ATTGGCTTTGCGTGAGACTA+AGG 0.453356 4.3:+7303046 MS.gene000411:CDS
AGAAAGCCCGGGGTCCCTCT+TGG 0.455646 4.3:-7305376 None:intergenic
CATTGGATCTTATCAAAACT+AGG 0.459278 4.3:+7305285 MS.gene000411:CDS
GATTATGCTCACATTGAAGC+AGG 0.464288 4.3:+7303134 MS.gene000411:CDS
TGGGATGCTCTTGTCAAGGC+TGG 0.469628 4.3:+7303350 MS.gene000411:CDS
GGACCCCGGGCTTTCTATAG+AGG 0.470590 4.3:+7305383 MS.gene000411:CDS
GGCTGCAAGTATTACTTACA+TGG 0.473791 4.3:+7306388 MS.gene000411:CDS
CAAGGCCTCTATAGAAAGCC+CGG 0.474710 4.3:-7305388 None:intergenic
GTGAGATCAATGCCTGCATA+AGG 0.489678 4.3:-7305434 None:intergenic
TTGAAAATATATATCAACAT+TGG 0.489803 4.3:+7304850 MS.gene000411:CDS
CTTGTAAGCACTAGAAGTGT+TGG 0.492262 4.3:-7306273 None:intergenic
CTTAAGGACGAAGGCTTTCG+AGG 0.496296 4.3:+7306323 MS.gene000411:CDS
TGCGTGAGACTAAGGAAGAA+AGG 0.499336 4.3:+7303054 MS.gene000411:CDS
TAAAACTTGATGGCGCTCTC+AGG 0.501460 4.3:-7305140 None:intergenic
CCTGGTCCTCTAGTACAACT+TGG 0.503374 4.3:+7305638 MS.gene000411:CDS
TACTTGTGTCTATCCACTGC+AGG 0.508122 4.3:+7305691 MS.gene000411:CDS
CTCCAAACCCAAATCATCTC+CGG 0.511140 4.3:+7302956 MS.gene000411:CDS
CTTGTTCTCCAATGTCTACA+AGG 0.511918 4.3:-7304884 None:intergenic
CACTGCAGGTTATTCGTACA+AGG 0.514518 4.3:+7305705 MS.gene000411:CDS
TGCTCCTCTTGATCGTCTAA+AGG 0.526318 4.3:+7304998 MS.gene000411:CDS
ACAGATTGCTATCTATCCAT+TGG 0.526332 4.3:+7305268 MS.gene000411:CDS
CCTCTAGTACAACTTGGATG+TGG 0.526958 4.3:+7305644 MS.gene000411:CDS
AAGTCAGATATTGGTACTGC+CGG 0.527417 4.3:+7305209 MS.gene000411:CDS
AAATCTCCTCAAAGTTGTGC+CGG 0.530979 4.3:+7306367 MS.gene000411:CDS
GATCCATATATCCTTTGTAA+GGG 0.533301 4.3:-7305354 None:intergenic
TGATCCATTGAAATTGAACC+GGG 0.535986 4.3:-7303017 None:intergenic
CCAAGTTGTACTAGAGGACC+AGG 0.543145 4.3:-7305638 None:intergenic
ACTTCTCCGACCACCGATCA+CGG 0.543289 4.3:+7302981 MS.gene000411:CDS
TATGGATCCAAGAGGGACCC+CGG 0.549177 4.3:+7305369 MS.gene000411:CDS
GCGTGAGACTAAGGAAGAAA+GGG 0.551313 4.3:+7303055 MS.gene000411:CDS
GGAATCATACCAAGAAGAGA+TGG 0.555459 4.3:-7305413 None:intergenic
CAGACTTGTGCGTCTGAAGG+TGG 0.555942 4.3:+7305311 MS.gene000411:CDS
AGGCTTTCGAGGGTTCTACA+AGG 0.560865 4.3:+7306334 MS.gene000411:CDS
TTAGCATATTTATATTCAGG+TGG 0.563760 4.3:-7303176 None:intergenic
GGTGGAAAGGCTCCGAACCT+AGG 0.563950 4.3:+7305329 MS.gene000411:CDS
ATTTGTGATGCTGATAGAGA+TGG 0.565356 4.3:+7303212 MS.gene000411:CDS
CATGTCTGGGGCCATAGACA+TGG 0.566057 4.3:+7302920 None:intergenic
ATGGATCCAAGAGGGACCCC+GGG 0.571593 4.3:+7305370 MS.gene000411:CDS
ATATATATCAACATTGGGAG+AGG 0.571984 4.3:+7304856 MS.gene000411:CDS
AAGGCCTCTATAGAAAGCCC+GGG 0.573250 4.3:-7305387 None:intergenic
CCGACCACCGATCACGGCCG+TGG 0.575645 4.3:+7302987 MS.gene000411:CDS
ACCTGAATATAAATATGCTA+AGG 0.576019 4.3:+7303178 MS.gene000411:CDS
GTGGTCTTACAAATTCAGAC+TGG 0.577576 4.3:+7305020 MS.gene000411:CDS
CTCTAGTACAACTTGGATGT+GGG 0.578834 4.3:+7305645 MS.gene000411:CDS
AGGGTATGCCTTGTAGACAT+TGG 0.583161 4.3:+7304876 MS.gene000411:CDS
TTACAGACTTGTGCGTCTGA+AGG 0.583228 4.3:+7305308 MS.gene000411:CDS
GCATCAGCAAGCATGTGCAC+AGG 0.584381 4.3:+7304922 MS.gene000411:CDS
AATGTAATTGGAGATAGTCA+AGG 0.585996 4.3:+7305182 MS.gene000411:CDS
TGGAAAACCCTTAAGGACGA+AGG 0.588718 4.3:+7306314 MS.gene000411:CDS
TTGTGCGTCTGAAGGTGGAA+AGG 0.589865 4.3:+7305316 MS.gene000411:CDS
CTTGTACGAATAACCTGCAG+TGG 0.590465 4.3:-7305704 None:intergenic
TAATGGGTTGAATGTTGTGA+AGG 0.593361 4.3:+7305112 MS.gene000411:CDS
TTAAGGACGAAGGCTTTCGA+GGG 0.595236 4.3:+7306324 MS.gene000411:CDS
ACTTTGGGATGCTCTTGTCA+AGG 0.602469 4.3:+7303346 MS.gene000411:CDS
ATGTAATTGGAGATAGTCAA+GGG 0.608848 4.3:+7305183 MS.gene000411:CDS
ACCACCTTTAGACGATCAAG+AGG 0.609465 4.3:-7305002 None:intergenic
TTTACCACGGCCGTGATCGG+TGG 0.612531 4.3:-7302991 None:intergenic
ATTATGCTCACATTGAAGCA+GGG 0.615028 4.3:+7303135 MS.gene000411:CDS
TAAGCACTAGAAGTGTTGGT+AGG 0.615335 4.3:-7306269 None:intergenic
TTTGTGATGCTGATAGAGAT+GGG 0.615874 4.3:+7303213 MS.gene000411:CDS
GAACAAGCTGTCATTCCTGA+AGG 0.618005 4.3:+7304900 MS.gene000411:CDS
GGCTTTCGAGGGTTCTACAA+GGG 0.618467 4.3:+7306335 MS.gene000411:CDS
TATATATCAACATTGGGAGA+GGG 0.618834 4.3:+7304857 MS.gene000411:CDS
GGCCATAGACATGGACCACG+TGG 0.619134 4.3:+7302929 MS.gene000411:CDS
CAACATTCAACCCATTACCT+CGG 0.628881 4.3:-7305106 None:intergenic
ATGTAAGTAATACTTGCAGC+CGG 0.630205 4.3:-7306386 None:intergenic
TCCTCTTGATCGTCTAAAGG+TGG 0.632322 4.3:+7305001 MS.gene000411:CDS
CCACGGCCGTGATCGGTGGT+CGG 0.632763 4.3:-7302987 None:intergenic
CCACATCCAAGTTGTACTAG+AGG 0.639833 4.3:-7305644 None:intergenic
ATAGATAGCAATCTGTGCAA+TGG 0.645374 4.3:-7305261 None:intergenic
TCGGTGGTCGGAGAAGTCGC+CGG 0.645691 4.3:-7302975 None:intergenic
CTTACAAATTCAGACTGGAA+AGG 0.645930 4.3:+7305025 MS.gene000411:CDS
AAGGATATATGGATCCAAGA+GGG 0.650322 4.3:+7305362 MS.gene000411:CDS
TACCAAGAAGAGATGGAACA+AGG 0.652820 4.3:-7305406 None:intergenic
AACACTTCTAGTGCTTACAA+GGG 0.655900 4.3:+7306275 MS.gene000411:CDS
AAATATATTATATCTGACCA+TGG 0.657158 4.3:+7305488 MS.gene000411:CDS
CACAACAAAACACATGTCTG+GGG 0.666612 4.3:+7302908 None:intergenic
ATGAAGATATGGCAACGAGA+CGG 0.675716 4.3:+7305068 MS.gene000411:CDS
TGCAGGGATTGAAATTGATG+AGG 0.683016 4.3:+7304722 MS.gene000411:intron
GCCATAGACATGGACCACGT+GGG 0.686014 4.3:+7302930 MS.gene000411:CDS
AAAGGATATATGGATCCAAG+AGG 0.690784 4.3:+7305361 MS.gene000411:CDS
GAACCTAGGAACCCTTACAA+AGG 0.697269 4.3:+7305343 MS.gene000411:CDS
AGGCCTCTATAGAAAGCCCG+GGG 0.730497 4.3:-7305386 None:intergenic
TGGGTTTGGAGAAACCCACG+TGG 0.761132 4.3:-7302944 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAGGTTAAATTTTATTT+TGG - chr4.3:7306184-7306203 None:intergenic 10.0%
!!! TCATTTTTTAAAATTATAAC+CGG - chr4.3:7303477-7303496 None:intergenic 10.0%
!! ATATATATGAGTTATAACTA+TGG - chr4.3:7304318-7304337 None:intergenic 15.0%
!! TACATTGTATAAATTCTAAA+AGG - chr4.3:7306200-7306219 None:intergenic 15.0%
!! TGAAAATATATATCAACATT+GGG + chr4.3:7304851-7304870 MS.gene000411:CDS 15.0%
!! TTAATAAAAACAAGTGAAAA+CGG - chr4.3:7304120-7304139 None:intergenic 15.0%
!! TTGAAAATATATATCAACAT+TGG + chr4.3:7304850-7304869 MS.gene000411:CDS 15.0%
!!! AATGTTGATATATATTTTCA+AGG - chr4.3:7304851-7304870 None:intergenic 15.0%
!!! ATGTTGATATATATTTTCAA+GGG - chr4.3:7304850-7304869 None:intergenic 15.0%
!! AAATATATTATATCTGACCA+TGG + chr4.3:7305488-7305507 MS.gene000411:CDS 20.0%
!! AACATACTAACATCAAAAAA+AGG - chr4.3:7303693-7303712 None:intergenic 20.0%
!! AATAACTCTATGAATTTGTA+TGG + chr4.3:7304468-7304487 MS.gene000411:intron 20.0%
!! ATTTATATACTAGGTCTTTA+AGG + chr4.3:7304611-7304630 MS.gene000411:intron 20.0%
!! GCTATAGTAAACATTAATAT+TGG + chr4.3:7303622-7303641 MS.gene000411:intron 20.0%
!! GGCATTATTATTTATATACT+AGG + chr4.3:7304602-7304621 MS.gene000411:intron 20.0%
!! GTCAGATATAATATATTTCT+TGG - chr4.3:7305486-7305505 None:intergenic 20.0%
!! TAGTAAACATTAATATTGGT+TGG + chr4.3:7303626-7303645 MS.gene000411:intron 20.0%
!!! AGTAAACATTAATATTGGTT+GGG + chr4.3:7303627-7303646 MS.gene000411:intron 20.0%
!!! ATATGTCCTTTAGTTATTTT+AGG + chr4.3:7305850-7305869 MS.gene000411:intron 20.0%
!!! TTGATTATCATGATTTTAGA+CGG + chr4.3:7303240-7303259 MS.gene000411:CDS 20.0%
! AAAAAAAACTTAAGGACCAA+AGG - chr4.3:7305880-7305899 None:intergenic 25.0%
! AAAAAAACTTAAGGACCAAA+GGG - chr4.3:7305879-7305898 None:intergenic 25.0%
! AAATGGGAAAATATCTCATA+TGG + chr4.3:7303924-7303943 MS.gene000411:intron 25.0%
! AACTCAATCTCATTTAGAAA+AGG - chr4.3:7303886-7303905 None:intergenic 25.0%
! AAGTGACATAATTAACAAGA+GGG - chr4.3:7303389-7303408 None:intergenic 25.0%
! AATCTGTAACATTTGTAACT+TGG + chr4.3:7306096-7306115 MS.gene000411:intron 25.0%
! AATGGAACGAAAAAAACTTA+AGG + chr4.3:7306125-7306144 MS.gene000411:intron 25.0%
! ACAATGAGAAAATGAAACAA+GGG - chr4.3:7304669-7304688 None:intergenic 25.0%
! ACATAAGTTTCTCTACTTAT+GGG - chr4.3:7304000-7304019 None:intergenic 25.0%
! ACCTGAATATAAATATGCTA+AGG + chr4.3:7303178-7303197 MS.gene000411:CDS 25.0%
! AGTGGAACAAAAAAAACTTA+AGG - chr4.3:7305888-7305907 None:intergenic 25.0%
! ATCTGTAACATTTGTAACTT+GGG + chr4.3:7306097-7306116 MS.gene000411:intron 25.0%
! ATGGAACGAAAAAAACTTAA+GGG + chr4.3:7306126-7306145 MS.gene000411:intron 25.0%
! CAAATGAAAAACTGAAAGAA+AGG + chr4.3:7306068-7306087 MS.gene000411:intron 25.0%
! GAAATGCTGAAAAATGTAAT+TGG + chr4.3:7305170-7305189 MS.gene000411:CDS 25.0%
! GCTTGTAGAAAAAATTTCAA+AGG + chr4.3:7304436-7304455 MS.gene000411:intron 25.0%
! GTCTAACATTCGTAAATTAA+GGG - chr4.3:7305916-7305935 None:intergenic 25.0%
! TAAAACCTGAAAACAACTTA+AGG + chr4.3:7306156-7306175 MS.gene000411:intron 25.0%
! TAAGTGACATAATTAACAAG+AGG - chr4.3:7303390-7303409 None:intergenic 25.0%
! TACAATGAGAAAATGAAACA+AGG - chr4.3:7304670-7304689 None:intergenic 25.0%
! TACATAAGTTTCTCTACTTA+TGG - chr4.3:7304001-7304020 None:intergenic 25.0%
! TCCTTAGCATATTTATATTC+AGG - chr4.3:7303182-7303201 None:intergenic 25.0%
! TGTCTAACATTCGTAAATTA+AGG - chr4.3:7305917-7305936 None:intergenic 25.0%
! TTAGCATATTTATATTCAGG+TGG - chr4.3:7303179-7303198 None:intergenic 25.0%
! TTCATAAGCATAAAACTTGA+TGG - chr4.3:7305153-7305172 None:intergenic 25.0%
! TTTCTTGGATATATCTTTCA+AGG - chr4.3:7305471-7305490 None:intergenic 25.0%
!! AAGAAGAAAAGAGCATAAAA+AGG - chr4.3:7305611-7305630 None:intergenic 25.0%
!! AGATATTTTCCCATTTTAGA+AGG - chr4.3:7303920-7303939 None:intergenic 25.0%
!! CATGTTGATAAGGATAATAA+TGG + chr4.3:7304768-7304787 MS.gene000411:CDS 25.0%
!! GTAAACATTAATATTGGTTG+GGG + chr4.3:7303628-7303647 MS.gene000411:intron 25.0%
!! TAAACATTAATATTGGTTGG+GGG + chr4.3:7303629-7303648 MS.gene000411:intron 25.0%
!! TTTACGAATGTTAGACATTT+TGG + chr4.3:7305920-7305939 MS.gene000411:intron 25.0%
!! TTTTGATGTTAGTATGTTGT+TGG + chr4.3:7303695-7303714 MS.gene000411:intron 25.0%
!!! AAGTTTTTTTCGTTCCATTT+TGG - chr4.3:7306124-7306143 None:intergenic 25.0%
!!! AAGTTTTTTTTGTTCCACTT+TGG + chr4.3:7305889-7305908 MS.gene000411:intron 25.0%
!!! GAATTATCACTTTTGAAGAA+TGG + chr4.3:7304790-7304809 MS.gene000411:CDS 25.0%
AAAAAGGAATAAGCATGCAA+TGG - chr4.3:7303677-7303696 None:intergenic 30.0%
AAAAGAAACATGCATTCACA+AGG - chr4.3:7304402-7304421 None:intergenic 30.0%
AAACAAGTGAAAACGGATAT+AGG - chr4.3:7304113-7304132 None:intergenic 30.0%
AAGAAGGAAACACAAGAAAT+AGG + chr4.3:7306030-7306049 MS.gene000411:intron 30.0%
AATCTAAGTTTCTTTGAGCA+AGG - chr4.3:7303828-7303847 None:intergenic 30.0%
AATGAGATTGAGTTTCACAA+AGG + chr4.3:7303892-7303911 MS.gene000411:intron 30.0%
AATGTAATTGGAGATAGTCA+AGG + chr4.3:7305182-7305201 MS.gene000411:CDS 30.0%
AATTGAAACAGTGATCCAAT+CGG + chr4.3:7304035-7304054 MS.gene000411:intron 30.0%
AGTGACATAATTAACAAGAG+GGG - chr4.3:7303388-7303407 None:intergenic 30.0%
ATATATATCAACATTGGGAG+AGG + chr4.3:7304856-7304875 MS.gene000411:CDS 30.0%
ATCAAAGATTGAAGTCGAAT+CGG - chr4.3:7304520-7304539 None:intergenic 30.0%
ATGATCCATTGAAATTGAAC+CGG - chr4.3:7303021-7303040 None:intergenic 30.0%
ATGGAAAAATCTTCCACAAA+AGG - chr4.3:7304645-7304664 None:intergenic 30.0%
ATGTAATTGGAGATAGTCAA+GGG + chr4.3:7305183-7305202 MS.gene000411:CDS 30.0%
CAAAAGCAAATAATGAGTGT+GGG + chr4.3:7305774-7305793 MS.gene000411:intron 30.0%
CATAAGTTTCTCTACTTATG+GGG - chr4.3:7303999-7304018 None:intergenic 30.0%
CATTGGATCTTATCAAAACT+AGG + chr4.3:7305285-7305304 MS.gene000411:CDS 30.0%
CCAGAGAAAAACATTACTTA+TGG - chr4.3:7305743-7305762 None:intergenic 30.0%
GATCCATATATCCTTTGTAA+GGG - chr4.3:7305357-7305376 None:intergenic 30.0%
GCTATTGATGTTGAACATAA+TGG + chr4.3:7303305-7303324 MS.gene000411:CDS 30.0%
GGGAAACCTAAAATAACTAA+AGG - chr4.3:7305859-7305878 None:intergenic 30.0%
GTACGAAACAATACAACAAT+CGG + chr4.3:7303966-7303985 MS.gene000411:intron 30.0%
TAAGTTAAAGAGATCAAGAG+TGG - chr4.3:7305527-7305546 None:intergenic 30.0%
TATATATCAACATTGGGAGA+GGG + chr4.3:7304857-7304876 MS.gene000411:CDS 30.0%
TATGAATTTGTATGGTGTGT+GGG + chr4.3:7304476-7304495 MS.gene000411:intron 30.0%
TATTCTTCCTGAAGAACTTT+GGG + chr4.3:7303331-7303350 MS.gene000411:CDS 30.0%
TCTTTGACGCTACTAATAAA+GGG + chr4.3:7303105-7303124 MS.gene000411:CDS 30.0%
TGGAAAAATCTTCCACAAAA+GGG - chr4.3:7304644-7304663 None:intergenic 30.0%
TTCAATGGATCATGTTCTAT+TGG + chr4.3:7303028-7303047 MS.gene000411:CDS 30.0%
TTCTTTGACGCTACTAATAA+AGG + chr4.3:7303104-7303123 MS.gene000411:CDS 30.0%
TTGAAAATCGGTCAAAACTT+TGG - chr4.3:7304222-7304241 None:intergenic 30.0%
! AAACATTAATATTGGTTGGG+GGG + chr4.3:7303630-7303649 MS.gene000411:intron 30.0%
! CCATAAGTAATGTTTTTCTC+TGG + chr4.3:7305740-7305759 MS.gene000411:intron 30.0%
! TATATACTAGGTCTTTAAGG+TGG + chr4.3:7304614-7304633 MS.gene000411:intron 30.0%
! TCATGATTTTAGACGGTATA+TGG + chr4.3:7303247-7303266 MS.gene000411:CDS 30.0%
!! ACAAAGGTTCCTTCTAAAAT+GGG + chr4.3:7303908-7303927 MS.gene000411:intron 30.0%
!! ACACTCATTATTTGCTTTTG+GGG - chr4.3:7305774-7305793 None:intergenic 30.0%
!! CACACTCATTATTTGCTTTT+GGG - chr4.3:7305775-7305794 None:intergenic 30.0%
!! CTTGATAGCTAGCTTTATAA+TGG + chr4.3:7305814-7305833 MS.gene000411:intron 30.0%
!!! AGTTATTTTAGGTTTCCCTT+TGG + chr4.3:7305861-7305880 MS.gene000411:intron 30.0%
!!! CTAGTTTTGATAAGATCCAA+TGG - chr4.3:7305287-7305306 None:intergenic 30.0%
!!! CTTGTTACTTTTCCTTGATT+GGG + chr4.3:7303725-7303744 MS.gene000411:intron 30.0%
!!! GTTGTTTTCAGGTTTTACTT+TGG - chr4.3:7306153-7306172 None:intergenic 30.0%
!!! TGTTTTTTGGAAAACCCTTA+AGG + chr4.3:7306307-7306326 MS.gene000411:CDS 30.0%
!!! TTCCTTGTTTTTTACTGAAC+CGG - chr4.3:7304063-7304082 None:intergenic 30.0%
AAAACCCGGTTCAATTTCAA+TGG + chr4.3:7303013-7303032 MS.gene000411:CDS 35.0%
AAAGGATATATGGATCCAAG+AGG + chr4.3:7305361-7305380 MS.gene000411:CDS 35.0%
AACACTTCTAGTGCTTACAA+GGG + chr4.3:7306275-7306294 MS.gene000411:CDS 35.0%
AACATTTCTTGTCCCAATCA+AGG - chr4.3:7303740-7303759 None:intergenic 35.0%
AAGAAAGGGATGTTCGTATT+CGG + chr4.3:7303069-7303088 MS.gene000411:CDS 35.0%
AAGGATATATGGATCCAAGA+GGG + chr4.3:7305362-7305381 MS.gene000411:CDS 35.0%
ACAGATTGCTATCTATCCAT+TGG + chr4.3:7305268-7305287 MS.gene000411:CDS 35.0%
ACTTGCTTACTTTATCGTGT+GGG + chr4.3:7304568-7304587 MS.gene000411:intron 35.0%
ATAGATAGCAATCTGTGCAA+TGG - chr4.3:7305264-7305283 None:intergenic 35.0%
ATGTAAGTAATACTTGCAGC+CGG - chr4.3:7306389-7306408 None:intergenic 35.0%
ATTATGCTCACATTGAAGCA+GGG + chr4.3:7303135-7303154 MS.gene000411:CDS 35.0%
ATTTGAGTCCGTCAAATGTT+TGG + chr4.3:7305964-7305983 MS.gene000411:intron 35.0%
ATTTGTGATGCTGATAGAGA+TGG + chr4.3:7303212-7303231 MS.gene000411:CDS 35.0%
CCAAAAGCAAATAATGAGTG+TGG + chr4.3:7305773-7305792 MS.gene000411:intron 35.0%
CTATGAATTTGTATGGTGTG+TGG + chr4.3:7304475-7304494 MS.gene000411:intron 35.0%
CTGGATCAATGCTTGAAAAT+CGG - chr4.3:7304234-7304253 None:intergenic 35.0%
CTTACAAATTCAGACTGGAA+AGG + chr4.3:7305025-7305044 MS.gene000411:CDS 35.0%
CTTTGTTGAGCATGTTGATA+AGG + chr4.3:7304758-7304777 MS.gene000411:CDS 35.0%
GAACCCTTACAAAGGATATA+TGG + chr4.3:7305351-7305370 MS.gene000411:CDS 35.0%
GAGAAAATGAAACAAGGGAA+TGG - chr4.3:7304664-7304683 None:intergenic 35.0%
GATTCGACTTCAATCTTTGA+TGG + chr4.3:7304519-7304538 MS.gene000411:intron 35.0%
GGATCCATATATCCTTTGTA+AGG - chr4.3:7305358-7305377 None:intergenic 35.0%
GTATTCTTCCTGAAGAACTT+TGG + chr4.3:7303330-7303349 MS.gene000411:CDS 35.0%
GTGACATAATTAACAAGAGG+GGG - chr4.3:7303387-7303406 None:intergenic 35.0%
GTGGCAAAAATATCATACCA+TGG - chr4.3:7305508-7305527 None:intergenic 35.0%
TAATGAGTGTGGGATGATAT+CGG + chr4.3:7305784-7305803 MS.gene000411:intron 35.0%
TACTTGCTTACTTTATCGTG+TGG + chr4.3:7304567-7304586 MS.gene000411:intron 35.0%
TCTGTAGTCATTCATAGGTT+TGG + chr4.3:7304372-7304391 MS.gene000411:intron 35.0%
TGATCCATTGAAATTGAACC+GGG - chr4.3:7303020-7303039 None:intergenic 35.0%
TGGGAAAATATCTCATATGG+TGG + chr4.3:7303927-7303946 MS.gene000411:intron 35.0%
TTGTAGTGCCAAACATTTGA+CGG - chr4.3:7305975-7305994 None:intergenic 35.0%
TTTGTAACTTGGGACCAAAA+TGG + chr4.3:7306107-7306126 MS.gene000411:intron 35.0%
TTTGTGATGCTGATAGAGAT+GGG + chr4.3:7303213-7303232 MS.gene000411:CDS 35.0%
! AGCAGATATTTTATTGCAGG+GGG + chr4.3:7304945-7304964 MS.gene000411:CDS 35.0%
! AGGAGCAGATATTTTATTGC+AGG + chr4.3:7304942-7304961 MS.gene000411:CDS 35.0%
! CACAAAGGTTCCTTCTAAAA+TGG + chr4.3:7303907-7303926 MS.gene000411:intron 35.0%
! CCACACTCATTATTTGCTTT+TGG - chr4.3:7305776-7305795 None:intergenic 35.0%
! CCTTATTTGTGTCAAAGATG+CGG - chr4.3:7304259-7304278 None:intergenic 35.0%
! CTTTTCTTCTTCATAGAACC+TGG + chr4.3:7305620-7305639 MS.gene000411:intron 35.0%
! GAGCAGATATTTTATTGCAG+GGG + chr4.3:7304944-7304963 MS.gene000411:CDS 35.0%
! GGAGCAGATATTTTATTGCA+GGG + chr4.3:7304943-7304962 MS.gene000411:CDS 35.0%
! GTGAATGCATGTTTCTTTTG+AGG + chr4.3:7304403-7304422 MS.gene000411:intron 35.0%
! GTTAGTATGTTGTTGGTTGT+TGG + chr4.3:7303702-7303721 MS.gene000411:intron 35.0%
!! ACATTTGACGGACTCAAATA+TGG - chr4.3:7305963-7305982 None:intergenic 35.0%
!! CGCTACTAATAAAGGGTATT+TGG + chr4.3:7303112-7303131 MS.gene000411:CDS 35.0%
!! GGCACTACAATTTGTTGATT+AGG + chr4.3:7305985-7306004 MS.gene000411:intron 35.0%
!! TAATGGGTTGAATGTTGTGA+AGG + chr4.3:7305112-7305131 MS.gene000411:CDS 35.0%
!! TGGATCCTTAAGTTGTTTTC+AGG - chr4.3:7306164-7306183 None:intergenic 35.0%
!!! AGGGAATGTCTGATGTTTTT+TGG + chr4.3:7306294-7306313 MS.gene000411:CDS 35.0%
!!! GCTTGTTACTTTTCCTTGAT+TGG + chr4.3:7303724-7303743 MS.gene000411:intron 35.0%
AAATCTCCTCAAAGTTGTGC+CGG + chr4.3:7306367-7306386 MS.gene000411:CDS 40.0%
AAGTCAGATATTGGTACTGC+CGG + chr4.3:7305209-7305228 MS.gene000411:CDS 40.0%
ACATGTGTCCATGTCTATCA+CGG - chr4.3:7303530-7303549 None:intergenic 40.0%
ACTTGCATTGCCTATGATTG+TGG + chr4.3:7303787-7303806 MS.gene000411:intron 40.0%
ATGAAGATATGGCAACGAGA+CGG + chr4.3:7305068-7305087 MS.gene000411:CDS 40.0%
ATTACATTGCCATGCTTCTC+AGG + chr4.3:7306234-7306253 MS.gene000411:intron 40.0%
CAACACTTCTAGTGCTTACA+AGG + chr4.3:7306274-7306293 MS.gene000411:CDS 40.0%
CAACATTCAACCCATTACCT+CGG - chr4.3:7305109-7305128 None:intergenic 40.0%
CAAGGGAACAAGTCAGATAT+TGG + chr4.3:7305200-7305219 MS.gene000411:CDS 40.0%
CACCTTCAAGTAGAAGTTCA+TGG - chr4.3:7304183-7304202 None:intergenic 40.0%
CATGAACTTCTACTTGAAGG+TGG + chr4.3:7304181-7304200 MS.gene000411:intron 40.0%
CCGCATCTTTGACACAAATA+AGG + chr4.3:7304256-7304275 MS.gene000411:intron 40.0%
CGTAAATTAAGGGACCAAAG+TGG - chr4.3:7305906-7305925 None:intergenic 40.0%
CTCTAGTACAACTTGGATGT+GGG + chr4.3:7305645-7305664 MS.gene000411:CDS 40.0%
CTTCATTACTGCTGGCATAA+TGG - chr4.3:7305054-7305073 None:intergenic 40.0%
CTTGGTATGATTCCTTATGC+AGG + chr4.3:7305422-7305441 MS.gene000411:CDS 40.0%
CTTGTTCTCCAATGTCTACA+AGG - chr4.3:7304887-7304906 None:intergenic 40.0%
GACCATGAACTTCTACTTGA+AGG + chr4.3:7304178-7304197 MS.gene000411:intron 40.0%
GAGGTTCTGTAGTCATTCAT+AGG + chr4.3:7304367-7304386 MS.gene000411:intron 40.0%
GATTATGCTCACATTGAAGC+AGG + chr4.3:7303134-7303153 MS.gene000411:CDS 40.0%
GGAATCATACCAAGAAGAGA+TGG - chr4.3:7305416-7305435 None:intergenic 40.0%
GGCTGCAAGTATTACTTACA+TGG + chr4.3:7306388-7306407 MS.gene000411:CDS 40.0%
TACCAAGAAGAGATGGAACA+AGG - chr4.3:7305409-7305428 None:intergenic 40.0%
TATCCTTTGTAAGGGTTCCT+AGG - chr4.3:7305349-7305368 None:intergenic 40.0%
TCCTTCTTCTTCTTCTTGCT+GGG - chr4.3:7306018-7306037 None:intergenic 40.0%
TCGACTTCAATCTTTGATGG+TGG + chr4.3:7304522-7304541 MS.gene000411:intron 40.0%
TGCAGGGATTGAAATTGATG+AGG + chr4.3:7304722-7304741 MS.gene000411:intron 40.0%
TGCCAGCAGTAATGAAGATA+TGG + chr4.3:7305057-7305076 MS.gene000411:CDS 40.0%
TGCCATATCTTCATTACTGC+TGG - chr4.3:7305062-7305081 None:intergenic 40.0%
TTCCTTCTTCTTCTTCTTGC+TGG - chr4.3:7306019-7306038 None:intergenic 40.0%
TTTGTAAGGGTTCCTAGGTT+CGG - chr4.3:7305344-7305363 None:intergenic 40.0%
! ATCGTGTGGGTTATATGTTC+AGG + chr4.3:7304581-7304600 MS.gene000411:intron 40.0%
! CTTGTAAGCACTAGAAGTGT+TGG - chr4.3:7306276-7306295 None:intergenic 40.0%
! GGTTTATTAGGGTTTTTCCG+AGG + chr4.3:7305089-7305108 MS.gene000411:CDS 40.0%
! GTGGTCTTACAAATTCAGAC+TGG + chr4.3:7305020-7305039 MS.gene000411:CDS 40.0%
! TAAGGTGGTATTCCCTTTTG+TGG + chr4.3:7304629-7304648 MS.gene000411:intron 40.0%
! TAGGGTTTTTCCGAGGTAAT+GGG + chr4.3:7305096-7305115 MS.gene000411:CDS 40.0%
! TTAGGGTTTTTCCGAGGTAA+TGG + chr4.3:7305095-7305114 MS.gene000411:CDS 40.0%
!! TAAGCACTAGAAGTGTTGGT+AGG - chr4.3:7306272-7306291 None:intergenic 40.0%
!! TCATATGGTGGATTGATGCT+TGG + chr4.3:7303939-7303958 MS.gene000411:intron 40.0%
!! TGCCGGTTCAGTAAAAAACA+AGG + chr4.3:7304058-7304077 MS.gene000411:intron 40.0%
!!! TTGAACCGGGTTTTTTACCA+CGG - chr4.3:7303007-7303026 None:intergenic 40.0%
AAGTCACTGCCTCTTCTGTA+CGG + chr4.3:7304156-7304175 MS.gene000411:intron 45.0%
AATATGGAGACAAGGCAGGA+AGG - chr4.3:7305947-7305966 None:intergenic 45.0%
ACCAAACACGCCTTCAATCA+GGG + chr4.3:7303555-7303574 MS.gene000411:intron 45.0%
ACCACCTTTAGACGATCAAG+AGG - chr4.3:7305005-7305024 None:intergenic 45.0%
ACCCAGCAAGAAGAAGAAGA+AGG + chr4.3:7306014-7306033 MS.gene000411:intron 45.0%
ACTTGGATGTGGGACAGTTT+CGG + chr4.3:7305655-7305674 MS.gene000411:CDS 45.0%
AGGGTATGCCTTGTAGACAT+TGG + chr4.3:7304876-7304895 MS.gene000411:CDS 45.0%
CAAATGTTGAGAGACTGCAG+AGG + chr4.3:7304348-7304367 MS.gene000411:intron 45.0%
CACTGCAGGTTATTCGTACA+AGG + chr4.3:7305705-7305724 MS.gene000411:CDS 45.0%
CCACATCCAAGTTGTACTAG+AGG - chr4.3:7305647-7305666 None:intergenic 45.0%
CCTCTAGTACAACTTGGATG+TGG + chr4.3:7305644-7305663 MS.gene000411:CDS 45.0%
CGGACTCAAATATGGAGACA+AGG - chr4.3:7305955-7305974 None:intergenic 45.0%
CTCAAATATGGAGACAAGGC+AGG - chr4.3:7305951-7305970 None:intergenic 45.0%
CTCCAAACCCAAATCATCTC+CGG + chr4.3:7302956-7302975 MS.gene000411:CDS 45.0%
CTTGTACGAATAACCTGCAG+TGG - chr4.3:7305707-7305726 None:intergenic 45.0%
GAACAAGCTGTCATTCCTGA+AGG + chr4.3:7304900-7304919 MS.gene000411:CDS 45.0%
GAACCTAGGAACCCTTACAA+AGG + chr4.3:7305343-7305362 MS.gene000411:CDS 45.0%
GACCTATGAAGCTCATACAC+CGG + chr4.3:7303435-7303454 MS.gene000411:intron 45.0%
GCGTGAGACTAAGGAAGAAA+GGG + chr4.3:7303055-7303074 MS.gene000411:CDS 45.0%
GGCAACGAGACGGTTTATTA+GGG + chr4.3:7305078-7305097 MS.gene000411:CDS 45.0%
GTCATTGTCCGTGATAGACA+TGG + chr4.3:7303519-7303538 MS.gene000411:intron 45.0%
GTGAGATCAATGCCTGCATA+AGG - chr4.3:7305437-7305456 None:intergenic 45.0%
GTTACAGCAGCCACAATCAT+AGG - chr4.3:7303800-7303819 None:intergenic 45.0%
GTTTCTCTACTTATGGGGAG+AGG - chr4.3:7303994-7304013 None:intergenic 45.0%
TACTTAGCCTCCCTGATTGA+AGG - chr4.3:7303568-7303587 None:intergenic 45.0%
TACTTGTGTCTATCCACTGC+AGG + chr4.3:7305691-7305710 MS.gene000411:CDS 45.0%
TCCTCTTGATCGTCTAAAGG+TGG + chr4.3:7305001-7305020 MS.gene000411:CDS 45.0%
TCGAAAGCCTTCGTCCTTAA+GGG - chr4.3:7306324-7306343 None:intergenic 45.0%
TGCGTGAGACTAAGGAAGAA+AGG + chr4.3:7303054-7303073 MS.gene000411:CDS 45.0%
TGCTCCTCTTGATCGTCTAA+AGG + chr4.3:7304998-7305017 MS.gene000411:CDS 45.0%
TGGAAAACCCTTAAGGACGA+AGG + chr4.3:7306314-7306333 MS.gene000411:CDS 45.0%
TGGCAACGAGACGGTTTATT+AGG + chr4.3:7305077-7305096 MS.gene000411:CDS 45.0%
TTAAGGACGAAGGCTTTCGA+GGG + chr4.3:7306324-7306343 MS.gene000411:CDS 45.0%
TTACAGACTTGTGCGTCTGA+AGG + chr4.3:7305308-7305327 MS.gene000411:CDS 45.0%
TTTATTGCAGGGGGAATAGC+AGG + chr4.3:7304954-7304973 MS.gene000411:CDS 45.0%
! AAGACTTTTTGCAGGTGGCA+TGG + chr4.3:7305232-7305251 MS.gene000411:CDS 45.0%
! AGAGCATCCCAAAGTTCTTC+AGG - chr4.3:7303341-7303360 None:intergenic 45.0%
! CATTAATATTGGTTGGGGGG+TGG + chr4.3:7303633-7303652 MS.gene000411:intron 45.0%
! GGCACAACTTTGAGGAGATT+TGG - chr4.3:7306368-7306387 None:intergenic 45.0%
!! ACTTTGGGATGCTCTTGTCA+AGG + chr4.3:7303346-7303365 MS.gene000411:CDS 45.0%
!! ATTGGCTTTGCGTGAGACTA+AGG + chr4.3:7303046-7303065 MS.gene000411:CDS 45.0%
!! TAAAACTTGATGGCGCTCTC+AGG - chr4.3:7305143-7305162 None:intergenic 45.0%
!! TTTTCAAGGGTTGCTTCGTG+AGG - chr4.3:7304837-7304856 None:intergenic 45.0%
!!! TTTTTTACCACGGCCGTGAT+CGG - chr4.3:7302997-7303016 None:intergenic 45.0%
!! AATTTATCAATAAAAATATA+AGG - chr4.3:7305568-7305587 None:intergenic 5.0%
!!! TTTTATTAAATTAATAACAT+CGG + chr4.3:7304131-7304150 MS.gene000411:intron 5.0%
AAACACGCCTTCAATCAGGG+AGG + chr4.3:7303558-7303577 MS.gene000411:intron 50.0%
AACAGTGATCCAATCGGTGC+CGG + chr4.3:7304041-7304060 MS.gene000411:intron 50.0%
AAGGCCTCTATAGAAAGCCC+GGG - chr4.3:7305390-7305409 None:intergenic 50.0%
AATCCCTGCAGCATCAAAGC+TGG - chr4.3:7304712-7304731 None:intergenic 50.0%
AGAAGTCGCCGGAGATGATT+TGG - chr4.3:7302967-7302986 None:intergenic 50.0%
AGGCTTTCGAGGGTTCTACA+AGG + chr4.3:7306334-7306353 MS.gene000411:CDS 50.0%
CAAGGCCTCTATAGAAAGCC+CGG - chr4.3:7305391-7305410 None:intergenic 50.0%
CACCAAACACGCCTTCAATC+AGG + chr4.3:7303554-7303573 MS.gene000411:intron 50.0%
CCAAGTTGTACTAGAGGACC+AGG - chr4.3:7305641-7305660 None:intergenic 50.0%
CCTGGTCCTCTAGTACAACT+TGG + chr4.3:7305638-7305657 MS.gene000411:CDS 50.0%
CTAGAAATGCGCTGCTTGAG+AGG + chr4.3:7304282-7304301 MS.gene000411:intron 50.0%
CTCGAAAGCCTTCGTCCTTA+AGG - chr4.3:7306325-7306344 None:intergenic 50.0%
CTTAAGGACGAAGGCTTTCG+AGG + chr4.3:7306323-7306342 MS.gene000411:CDS 50.0%
CTTCTTCTTCTTGCTGGGTG+AGG - chr4.3:7306013-7306032 None:intergenic 50.0%
CTTGGATGTGGGACAGTTTC+GGG + chr4.3:7305656-7305675 MS.gene000411:CDS 50.0%
GAAGTCGCCGGAGATGATTT+GGG - chr4.3:7302966-7302985 None:intergenic 50.0%
GCCACCTGCAAAAAGTCTTC+CGG - chr4.3:7305231-7305250 None:intergenic 50.0%
GGCTTTCGAGGGTTCTACAA+GGG + chr4.3:7306335-7306354 MS.gene000411:CDS 50.0%
GTCCGGTGTATGAGCTTCAT+AGG - chr4.3:7303440-7303459 None:intergenic 50.0%
GTTCATGGTCCGTACAGAAG+AGG - chr4.3:7304168-7304187 None:intergenic 50.0%
TTGTGCGTCTGAAGGTGGAA+AGG + chr4.3:7305316-7305335 MS.gene000411:CDS 50.0%
! AAAGCCAGCTTTGATGCTGC+AGG + chr4.3:7304705-7304724 MS.gene000411:intron 50.0%
! AAGCCAGCTTTGATGCTGCA+GGG + chr4.3:7304706-7304725 MS.gene000411:intron 50.0%
! ACATGCTTGCTGATGCCTTC+AGG - chr4.3:7304918-7304937 None:intergenic 50.0%
! ACTGCCGGAAGACTTTTTGC+AGG + chr4.3:7305224-7305243 MS.gene000411:CDS 50.0%
! TCCCTGATTGAAGGCGTGTT+TGG - chr4.3:7303559-7303578 None:intergenic 50.0%
! TGCAGCATCAAAGCTGGCTT+TGG - chr4.3:7304706-7304725 None:intergenic 50.0%
!! GGCCTTGTTCCATCTCTTCT+TGG + chr4.3:7305404-7305423 MS.gene000411:CDS 50.0%
!! TTTACTGAACCGGCACCGAT+TGG - chr4.3:7304053-7304072 None:intergenic 50.0%
ACCCACGTGGTCCATGTCTA+TGG - chr4.3:7302934-7302953 None:intergenic 55.0%
ACTTCTCCGACCACCGATCA+CGG + chr4.3:7302981-7303000 MS.gene000411:CDS 55.0%
AGGCCTCTATAGAAAGCCCG+GGG - chr4.3:7305389-7305408 None:intergenic 55.0%
ATCGGCCTTCACAAGTCCCA+CGG - chr4.3:7304502-7304521 None:intergenic 55.0%
CACGGCCGTGGTAAAAAACC+CGG + chr4.3:7302999-7303018 MS.gene000411:CDS 55.0%
CAGACTTGTGCGTCTGAAGG+TGG + chr4.3:7305311-7305330 MS.gene000411:CDS 55.0%
GCATCAGCAAGCATGTGCAC+AGG + chr4.3:7304922-7304941 MS.gene000411:CDS 55.0%
GCCATAGACATGGACCACGT+GGG + chr4.3:7302930-7302949 MS.gene000411:CDS 55.0%
TATGGATCCAAGAGGGACCC+CGG + chr4.3:7305369-7305388 MS.gene000411:CDS 55.0%
TGGGATGCTCTTGTCAAGGC+TGG + chr4.3:7303350-7303369 MS.gene000411:CDS 55.0%
TGGGTTTGGAGAAACCCACG+TGG - chr4.3:7302947-7302966 None:intergenic 55.0%
TTGCAGCCGGCACAACTTTG+AGG - chr4.3:7306376-7306395 None:intergenic 55.0%
TTGTATGGTGTGTGGGCCGT+GGG + chr4.3:7304483-7304502 MS.gene000411:intron 55.0%
TTGTGTCAAAGATGCGGCGC+TGG - chr4.3:7304253-7304272 None:intergenic 55.0%
TTTGTATGGTGTGTGGGCCG+TGG + chr4.3:7304482-7304501 MS.gene000411:intron 55.0%
! CGCCGGAGATGATTTGGGTT+TGG - chr4.3:7302961-7302980 None:intergenic 55.0%
! CTTTTTGCAGGTGGCATGGC+TGG + chr4.3:7305236-7305255 MS.gene000411:CDS 55.0%
! GCCGGAAGACTTTTTGCAGG+TGG + chr4.3:7305227-7305246 MS.gene000411:CDS 55.0%
ATGGATCCAAGAGGGACCCC+GGG + chr4.3:7305370-7305389 MS.gene000411:CDS 60.0%
CGGACACGACACTGACACAC+CGG + chr4.3:7303455-7303474 MS.gene000411:intron 60.0%
CGGTGTGTCAGTGTCGTGTC+CGG - chr4.3:7303457-7303476 None:intergenic 60.0%
GGACCCCGGGCTTTCTATAG+AGG + chr4.3:7305383-7305402 MS.gene000411:CDS 60.0%
GGCCATAGACATGGACCACG+TGG + chr4.3:7302929-7302948 MS.gene000411:CDS 60.0%
GGGACAGTTTCGGGAGCTCT+TGG + chr4.3:7305665-7305684 MS.gene000411:CDS 60.0%
GGTGGAAAGGCTCCGAACCT+AGG + chr4.3:7305329-7305348 MS.gene000411:CDS 60.0%
TGCCATGCTTCTCAGGCTGC+AGG + chr4.3:7306241-7306260 MS.gene000411:intron 60.0%
TTTACCACGGCCGTGATCGG+TGG - chr4.3:7302994-7303013 None:intergenic 60.0%
AGAAAGCCCGGGGTCCCTCT+TGG - chr4.3:7305379-7305398 None:intergenic 65.0%
CGCCTGCAGCCTGAGAAGCA+TGG - chr4.3:7306246-7306265 None:intergenic 65.0%
GTGGGCCGTGGGACTTGTGA+AGG + chr4.3:7304494-7304513 MS.gene000411:intron 65.0%
TCGGTGGTCGGAGAAGTCGC+CGG - chr4.3:7302978-7302997 None:intergenic 65.0%
CCACGGCCGTGATCGGTGGT+CGG - chr4.3:7302990-7303009 None:intergenic 70.0%
CCGACCACCGATCACGGCCG+TGG + chr4.3:7302987-7303006 MS.gene000411:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 7302921 7306448 7302921 ID=MS.gene000411
chr4.3 mRNA 7302921 7306448 7302921 ID=MS.gene000411.t1;Parent=MS.gene000411
chr4.3 exon 7302921 7303371 7302921 ID=MS.gene000411.t1.exon1;Parent=MS.gene000411.t1
chr4.3 CDS 7302921 7303371 7302921 ID=cds.MS.gene000411.t1;Parent=MS.gene000411.t1
chr4.3 exon 7304727 7305509 7304727 ID=MS.gene000411.t1.exon2;Parent=MS.gene000411.t1
chr4.3 CDS 7304727 7305509 7304727 ID=cds.MS.gene000411.t1;Parent=MS.gene000411.t1
chr4.3 exon 7305636 7305726 7305636 ID=MS.gene000411.t1.exon3;Parent=MS.gene000411.t1
chr4.3 CDS 7305636 7305726 7305636 ID=cds.MS.gene000411.t1;Parent=MS.gene000411.t1
chr4.3 exon 7306256 7306448 7306256 ID=MS.gene000411.t1.exon4;Parent=MS.gene000411.t1
chr4.3 CDS 7306256 7306448 7306256 ID=cds.MS.gene000411.t1;Parent=MS.gene000411.t1
Gene Sequence

>MS.gene000411

ATGTCTGGGGCCATAGACATGGACCACGTGGGTTTCTCCAAACCCAAATCATCTCCGGCGACTTCTCCGACCACCGATCACGGCCGTGGTAAAAAACCCGGTTCAATTTCAATGGATCATGTTCTATTGGCTTTGCGTGAGACTAAGGAAGAAAGGGATGTTCGTATTCGGAGTTTATTCAATTTCTTTGACGCTACTAATAAAGGGTATTTGGATTATGCTCACATTGAAGCAGGGTTATCTGCACTTCAGATTCCACCTGAATATAAATATGCTAAGGAGCTTTTTAAGATTTGTGATGCTGATAGAGATGGGAGAATTGATTATCATGATTTTAGACGGTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGAACATAATGGTTGTATTCTTCCTGAAGAACTTTGGGATGCTCTTGTCAAGGCTGGTATTCTTTTAGCCCCCTCTTGTTAATTATGTCACTTACTTTGTTAATTATGTTTTTTCATCTGACCTATGAAGCTCATACACCGGACACGACACTGACACACCGGTTATAATTTTAAAAAATGACATAATTGAAGTAATCGCATGTGTCATTGTCCGTGATAGACATGGACACATGTCAGACACCAAACACGCCTTCAATCAGGGAGGCTAAGTATAAGTATCACTATAGTAAAAAAAATTTTGAACAAGCTATAGTAAACATTAATATTGGTTGGGGGGTGGTATTGCTGTCTCTTTCATCCATTGCATGCTTATTCCTTTTTTTGATGTTAGTATGTTGTTGGTTGTTGGCTTGTTACTTTTCCTTGATTGGGACAAGAAATGTTGATATTTGATGTTGCTCTTTAACTCAAACTTGCATTGCCTATGATTGTGGCTGCTGTAACTGCAACCTTGCTCAAAGAAACTTAGATTGTAGTTGTATATAAGTATTTGTAGATTCTATGCAACCTTTTCTAAATGAGATTGAGTTTCACAAAGGTTCCTTCTAAAATGGGAAAATATCTCATATGGTGGATTGATGCTTGGATTTGTACGAAACAATACAACAATCGGTGCCTCTCCCCATAAGTAGAGAAACTTATGTATTACTTGTACATACAATTGAAACAGTGATCCAATCGGTGCCGGTTCAGTAAAAAACAAGGAAAATGAACAATAGAGCATCAAAACACAACCTATATCCGTTTTCACTTGTTTTTATTAAATTAATAACATCGGTCAAGTCACTGCCTCTTCTGTACGGACCATGAACTTCTACTTGAAGGTGGTGACGTTGATCGATGCCAAAGTTTTGACCGATTTTCAAGCATTGATCCAGCGCCGCATCTTTGACACAAATAAGGAAGCTAGAAATGCGCTGCTTGAGAGGTCATTCGTAGCCATAGTTATAACTCATATATATCATGCGTGAACAAATGTTGAGAGACTGCAGAGGTTCTGTAGTCATTCATAGGTTTGGTAAACCTTGTGAATGCATGTTTCTTTTGAGGATGTTGTGTTGCTTGTAGAAAAAATTTCAAAGGAAATTTGTAAATAACTCTATGAATTTGTATGGTGTGTGGGCCGTGGGACTTGTGAAGGCCGATTCGACTTCAATCTTTGATGGTGGATTCTATATATGTTTACTCAATTACTTGCTTACTTTATCGTGTGGGTTATATGTTCAGGCATTATTATTTATATACTAGGTCTTTAAGGTGGTATTCCCTTTTGTGGAAGATTTTTCCATTCCCTTGTTTCATTTTCTCATTGTAGTATTTATCATAACCAAAGCCAGCTTTGATGCTGCAGGGATTGAAATTGATGAGGTTGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTTCTTTATCCTCACGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGGTATGCCTTGTAGACATTGGAGAACAAGCTGTCATTCCTGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGAATAGCAGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCATCCATTATGCCAGCAGTAATGAAGATATGGCAACGAGACGGTTTATTAGGGTTTTTCCGAGGTAATGGGTTGAATGTTGTGAAGGTTGCACCTGAGAGCGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGTCAAGGGAACAAGTCAGATATTGGTACTGCCGGAAGACTTTTTGCAGGTGGCATGGCTGGTGCCATTGCACAGATTGCTATCTATCCATTGGATCTTATCAAAACTAGGTTACAGACTTGTGCGTCTGAAGGTGGAAAGGCTCCGAACCTAGGAACCCTTACAAAGGATATATGGATCCAAGAGGGACCCCGGGCTTTCTATAGAGGCCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATATCCAAGAAATATATTATATCTGACCATGGTATGATATTTTTGCCACTCTTGATCTCTTTAACTTATTTAATTTCGTTAGTACACCTTATATTTTTATTGATAAATTGACACTTCTAGCATATTTAACCTTTTTATGCTCTTTTCTTCTTCATAGAACCTGGTCCTCTAGTACAACTTGGATGTGGGACAGTTTCGGGAGCTCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACAAGGTATTGTTTTGTGCCATAAGTAATGTTTTTCTCTGGTCTTCTCGCCCCAAAAGCAAATAATGAGTGTGGGATGATATCGGTTTTGTTCTTGATAGCTAGCTTTATAATGGCTAACTTGCACTTATATGTCCTTTAGTTATTTTAGGTTTCCCTTTGGTCCTTAAGTTTTTTTTGTTCCACTTTGGTCCCTTAATTTACGAATGTTAGACATTTTGGTCCTTCCTGCCTTGTCTCCATATTTGAGTCCGTCAAATGTTTGGCACTACAATTTGTTGATTAGGAGCCTCACCCAGCAAGAAGAAGAAGAAGGAAACACAAGAAATAGGAACATTTGACAGACTCAAATGAAAAACTGAAAGAAAGGACAAAAATCTGTAACATTTGTAACTTGGGACCAAAATGGAACGAAAAAAACTTAAGGGACCAAAGTAAAACCTGAAAACAACTTAAGGATCCAAAATAAAATTTAACCTTTTAGAATTTATACAATGTATGTTCTTTAATTACATTACATTGCCATGCTTCTCAGGCTGCAGGCGCAACCTACCAACACTTCTAGTGCTTACAAGGGAATGTCTGATGTTTTTTGGAAAACCCTTAAGGACGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCAAATCTCCTCAAAGTTGTGCCGGCTGCAAGTATTACTTACATGGTTTATGAAAATATGAAGAAGAATTTAGATCTTGATTAG
Protein sequence

>MS.gene000411.t1

MSGAIDMDHVGFSKPKSSPATSPTTDHGRGKKPGSISMDHVLLALRETKEERDVRIRSLFNFFDATNKGYLDYAHIEAGLSALQIPPEYKYAKELFKICDADRDGRIDYHDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDSQGNKSDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGKAPNLGTLTKDIWIQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDISKKYIISDHEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSSAYKGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKNLDLD