Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57378.t1 | GAU35090.1 | 75.1 | 405 | 55 | 6 | 1 | 389 | 39 | 413 | 8.00E-159 | 570.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57378.t1 | Q6ZD63 | 51.4 | 387 | 137 | 8 | 1 | 368 | 39 | 393 | 6.1e-99 | 362.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57378.t1 | A0A2Z6NFI2 | 75.1 | 405 | 55 | 6 | 1 | 389 | 39 | 413 | 5.8e-159 | 570.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056228 | MS.gene57378 | 0.800896 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41630 | MS.gene57378 | PPI |
| MS.gene21545 | MS.gene57378 | PPI |
| MS.gene89324 | MS.gene57378 | PPI |
| MS.gene21962 | MS.gene57378 | PPI |
| MS.gene045060 | MS.gene57378 | PPI |
| MS.gene57378 | MS.gene005659 | PPI |
| MS.gene91577 | MS.gene57378 | PPI |
| MS.gene70123 | MS.gene57378 | PPI |
| MS.gene75421 | MS.gene57378 | PPI |
| MS.gene57378 | MS.gene06293 | PPI |
| MS.gene013810 | MS.gene57378 | PPI |
| MS.gene57378 | MS.gene055205 | PPI |
| MS.gene57378 | MS.gene033106 | PPI |
| MS.gene57378 | MS.gene000411 | PPI |
| MS.gene46108 | MS.gene57378 | PPI |
| MS.gene026073 | MS.gene57378 | PPI |
| MS.gene061737 | MS.gene57378 | PPI |
| MS.gene07153 | MS.gene57378 | PPI |
| MS.gene013209 | MS.gene57378 | PPI |
| MS.gene049178 | MS.gene57378 | PPI |
| MS.gene025100 | MS.gene57378 | PPI |
| MS.gene57378 | MS.gene044401 | PPI |
| MS.gene49762 | MS.gene57378 | PPI |
| MS.gene58411 | MS.gene57378 | PPI |
| MS.gene89800 | MS.gene57378 | PPI |
| MS.gene85391 | MS.gene57378 | PPI |
| MS.gene030522 | MS.gene57378 | PPI |
| MS.gene02998 | MS.gene57378 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57378.t1 | MTR_8g093540 | 79.310 | 406 | 37 | 6 | 1 | 389 | 39 | 414 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57378.t1 | AT5G64630 | 52.882 | 399 | 136 | 8 | 1 | 377 | 39 | 407 | 1.15e-133 | 392 |
| MS.gene57378.t1 | AT5G64630 | 55.080 | 374 | 119 | 7 | 1 | 355 | 39 | 382 | 1.89e-133 | 388 |
| MS.gene57378.t1 | AT5G64630 | 52.909 | 361 | 118 | 8 | 39 | 377 | 18 | 348 | 9.31e-119 | 352 |
Find 88 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAACACCCTTTGATTTA+TGG | 0.105744 | 4.3:-8273945 | None:intergenic |
| TTGATAATTCTTGCATTATA+TGG | 0.142799 | 4.3:+8273678 | MS.gene57378:CDS |
| TCACGTCTCTACCCCATTTC+AGG | 0.177901 | 4.3:+8274863 | MS.gene57378:CDS |
| CGAGGAGAATGCTAAATAAA+TGG | 0.225152 | 4.3:-8276448 | None:intergenic |
| AAGCTTAAGGGAACAAATTC+AGG | 0.235111 | 4.3:+8275190 | MS.gene57378:CDS |
| CTCAACACCCTTTGATTTAT+GGG | 0.254796 | 4.3:-8273944 | None:intergenic |
| GCAAGATGGTTTCTGCTCTT+TGG | 0.262968 | 4.3:+8276470 | MS.gene57378:CDS |
| ACCTTGGAATTCTTTAATAA+TGG | 0.273035 | 4.3:-8274012 | None:intergenic |
| GGAGGGGTGAATTGTTAATA+TGG | 0.280752 | 4.3:+8272882 | MS.gene57378:CDS |
| TAAGCTGCATTTACAGATTC+AGG | 0.281279 | 4.3:-8274908 | None:intergenic |
| GGGTAGCCTGGGACCCTTTA+GGG | 0.287919 | 4.3:+8273866 | MS.gene57378:CDS |
| CCTGTATTATTTAAGCTTAA+GGG | 0.292681 | 4.3:+8275178 | MS.gene57378:CDS |
| TTGCAAGCATGTTATTTCTA+AGG | 0.302678 | 4.3:+8273981 | MS.gene57378:CDS |
| TCCTGTATTATTTAAGCTTA+AGG | 0.303126 | 4.3:+8275177 | MS.gene57378:CDS |
| TTATGGTCAGTTAAACCTTC+TGG | 0.304531 | 4.3:+8272522 | MS.gene57378:CDS |
| GGGGTAGCCTGGGACCCTTT+AGG | 0.319424 | 4.3:+8273865 | MS.gene57378:CDS |
| GTTATTCGCTTCTCTTCTTC+CGG | 0.322943 | 4.3:+8272612 | MS.gene57378:CDS |
| GATCTCATGTCAGGACATTA+TGG | 0.325572 | 4.3:+8273610 | MS.gene57378:intron |
| TCAGGGGAATTGTTAGCTTC+TGG | 0.327465 | 4.3:+8272733 | MS.gene57378:intron |
| CACTATGTTCAGGGGTAGCC+TGG | 0.334757 | 4.3:+8273854 | MS.gene57378:CDS |
| ACGGCAAATACAATGCGATA+TGG | 0.353051 | 4.3:-8276217 | None:intergenic |
| TCTTAAGAACCTTCCATGTT+TGG | 0.355215 | 4.3:-8272928 | None:intergenic |
| TTTCTAGAAAAGATCTTTCT+CGG | 0.365269 | 4.3:+8274936 | MS.gene57378:CDS |
| TGATAATTCTTGCATTATAT+GGG | 0.369746 | 4.3:+8273679 | MS.gene57378:CDS |
| ATTTCAGGTTCTTACAAAAT+CGG | 0.391340 | 4.3:+8274878 | MS.gene57378:CDS |
| GGGGCTTACTGATGTAAATT+CGG | 0.412302 | 4.3:-8273924 | None:intergenic |
| CCCTTAAGCTTAAATAATAC+AGG | 0.415889 | 4.3:-8275178 | None:intergenic |
| GTAGTCCGTATTTGTTCAAA+AGG | 0.420274 | 4.3:+8276414 | MS.gene57378:CDS |
| AATGATGCTGTACTGCCAAC+TGG | 0.420457 | 4.3:+8276663 | MS.gene57378:CDS |
| TCTCCAATAGCAATATTTGC+TGG | 0.427714 | 4.3:+8276283 | MS.gene57378:CDS |
| TACCCATGCACACTATGTTC+AGG | 0.428891 | 4.3:+8273844 | MS.gene57378:CDS |
| CGGCAAATACAATGCGATAT+GGG | 0.436720 | 4.3:-8276216 | None:intergenic |
| AGTTGGCAGTACAGCATCAT+TGG | 0.441293 | 4.3:-8276661 | None:intergenic |
| AAGCAATATACTTCCCTAAA+GGG | 0.441686 | 4.3:-8273879 | None:intergenic |
| ATGCTAAATAAATGGGCATC+AGG | 0.447429 | 4.3:-8276440 | None:intergenic |
| TGATGTAAATTCGGCAAGTC+CGG | 0.458166 | 4.3:-8273915 | None:intergenic |
| GAAGCAATATACTTCCCTAA+AGG | 0.462365 | 4.3:-8273880 | None:intergenic |
| AGATGGTTTCTGCTCTTTGG+TGG | 0.462913 | 4.3:+8276473 | MS.gene57378:CDS |
| AGGCCAGCAAATATTGCTAT+TGG | 0.470462 | 4.3:-8276286 | None:intergenic |
| TCTGAATTAGATCTCATGTC+AGG | 0.472996 | 4.3:+8273601 | MS.gene57378:intron |
| GAGGAGAATGCTAAATAAAT+GGG | 0.477127 | 4.3:-8276447 | None:intergenic |
| GATGGTGGATATATCATATC+CGG | 0.477811 | 4.3:+8273650 | MS.gene57378:CDS |
| TTGTAGCAGAAAGCATGAAA+TGG | 0.482679 | 4.3:+8276700 | MS.gene57378:CDS |
| AAGCTAATCTCTAAAGAAAG+AGG | 0.483462 | 4.3:-8274159 | None:intergenic |
| TTGTTAGCTTCTGGTTCTGA+TGG | 0.487437 | 4.3:+8272742 | MS.gene57378:CDS |
| GCAAGAATTATCAACTGATC+CGG | 0.489164 | 4.3:-8273669 | None:intergenic |
| TTGCTTCTCTTAGTTCTGAC+CGG | 0.499917 | 4.3:+8273896 | MS.gene57378:CDS |
| CTATTGACATAAGTAACTAC+TGG | 0.500469 | 4.3:-8272561 | None:intergenic |
| ACCCCTGAACATAGTGTGCA+TGG | 0.513642 | 4.3:-8273847 | None:intergenic |
| TGTTCTAGAAGAAAATGTCT+TGG | 0.518483 | 4.3:+8276611 | MS.gene57378:intron |
| TCTAGAAGAAAATGTCTTGG+AGG | 0.520903 | 4.3:+8276614 | MS.gene57378:intron |
| TCAACACCCTTTGATTTATG+GGG | 0.521191 | 4.3:-8273943 | None:intergenic |
| GAGTTCGAAAATGACGAACT+TGG | 0.523533 | 4.3:+8276495 | MS.gene57378:CDS |
| CAGTAAGCCCCATAAATCAA+AGG | 0.530540 | 4.3:+8273936 | MS.gene57378:CDS |
| ACCCATGCACACTATGTTCA+GGG | 0.531290 | 4.3:+8273845 | MS.gene57378:CDS |
| GTACTGCCAACTGGGAGTGT+TGG | 0.531914 | 4.3:+8276672 | MS.gene57378:CDS |
| CAGCATCATTGGCTGTCTGA+AGG | 0.533000 | 4.3:-8276650 | None:intergenic |
| GCACACGGAAGCTGTATAGC+AGG | 0.533198 | 4.3:-8275124 | None:intergenic |
| AAGCTACATTCAACGGATAC+CGG | 0.534046 | 4.3:+8272905 | MS.gene57378:CDS |
| GCCATTATTAAAGAATTCCA+AGG | 0.535247 | 4.3:+8274011 | MS.gene57378:CDS |
| ATACTTCCCTAAAGGGTCCC+AGG | 0.540607 | 4.3:-8273872 | None:intergenic |
| TGCTTACTTGATAAGCAGTA+AGG | 0.544917 | 4.3:-8276522 | None:intergenic |
| CACCATCAGTAGACCACTCC+AGG | 0.547065 | 4.3:-8273634 | None:intergenic |
| AAGAACCTTCCATGTTTGGC+CGG | 0.550032 | 4.3:-8272924 | None:intergenic |
| AAGAGGGCAATGTTTCATCA+TGG | 0.552525 | 4.3:-8274142 | None:intergenic |
| AGTAAGCCCCATAAATCAAA+GGG | 0.552990 | 4.3:+8273937 | MS.gene57378:CDS |
| CAATGAATTCAATGTGGCCA+CGG | 0.558304 | 4.3:-8276236 | None:intergenic |
| AGCATCATTGGCTGTCTGAA+GGG | 0.562358 | 4.3:-8276649 | None:intergenic |
| ACTATGTTCAGGGGTAGCCT+GGG | 0.563019 | 4.3:+8273855 | MS.gene57378:CDS |
| CAACGGATACCGGCCAAACA+TGG | 0.571072 | 4.3:+8272915 | MS.gene57378:CDS |
| TTAGCATTCTCCTCGCAAGA+TGG | 0.577028 | 4.3:+8276456 | MS.gene57378:CDS |
| ATGTCAGGACATTATGGACC+TGG | 0.579649 | 4.3:+8273616 | MS.gene57378:CDS |
| AGCTAATCTCTAAAGAAAGA+GGG | 0.580138 | 4.3:-8274158 | None:intergenic |
| AATATGGAAGCTACATTCAA+CGG | 0.583979 | 4.3:+8272898 | MS.gene57378:CDS |
| ATATCGCATTGTATTTGCCG+TGG | 0.587379 | 4.3:+8276219 | MS.gene57378:CDS |
| GACCTGGAGTGGTCTACTGA+TGG | 0.591206 | 4.3:+8273632 | MS.gene57378:CDS |
| ATGATGCTGTACTGCCAACT+GGG | 0.600017 | 4.3:+8276664 | MS.gene57378:CDS |
| CTGGAGTGGTCTACTGATGG+TGG | 0.606311 | 4.3:+8273635 | MS.gene57378:CDS |
| CCCCTGAACATAGTGTGCAT+GGG | 0.610840 | 4.3:-8273846 | None:intergenic |
| ACAACAGCTTTGCTTGCACA+CGG | 0.611738 | 4.3:-8275139 | None:intergenic |
| ATTATATGGGATGTTAACAA+AGG | 0.639783 | 4.3:+8273692 | MS.gene57378:CDS |
| GGATACCGGCCAAACATGGA+AGG | 0.640280 | 4.3:+8272919 | MS.gene57378:CDS |
| CTGTTACTGGAGCATAGTGA+AGG | 0.641031 | 4.3:-8276306 | None:intergenic |
| ACTGCACCAACACTCCCAGT+TGG | 0.657606 | 4.3:-8276678 | None:intergenic |
| AGAGCAGAAACCATCTTGCG+AGG | 0.660888 | 4.3:-8276466 | None:intergenic |
| AGGACATTATGGACCTGGAG+TGG | 0.661050 | 4.3:+8273621 | MS.gene57378:CDS |
| CCCATGCACACTATGTTCAG+GGG | 0.662833 | 4.3:+8273846 | MS.gene57378:CDS |
| AATGTACAATGAATTCAATG+TGG | 0.699967 | 4.3:-8276242 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTTAAATTAAAAA+CGG | - | chr4.3:8273400-8273419 | None:intergenic | 0.0% |
| !!! | AATTATGATGTTTTTTTTTT+TGG | + | chr4.3:8276378-8276397 | MS.gene57378:CDS | 10.0% |
| !!! | ATTATGATGTTTTTTTTTTT+GGG | + | chr4.3:8276379-8276398 | MS.gene57378:CDS | 10.0% |
| !!! | TTATTTAGCTTTTTTTTTTT+AGG | + | chr4.3:8272999-8273018 | MS.gene57378:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTCA+GGG | + | chr4.3:8272716-8272735 | MS.gene57378:intron | 10.0% |
| !!! | TTTTTTTTTTTTTATGTTTC+AGG | + | chr4.3:8272715-8272734 | MS.gene57378:intron | 10.0% |
| !! | AGACAATTATTGAATAAATA+GGG | + | chr4.3:8275567-8275586 | MS.gene57378:intron | 15.0% |
| !! | TAGACAATTATTGAATAAAT+AGG | + | chr4.3:8275566-8275585 | MS.gene57378:intron | 15.0% |
| !!! | AACTAACAATACATAAATTT+TGG | - | chr4.3:8274675-8274694 | None:intergenic | 15.0% |
| !!! | ATGATGGTTTTTATAATATT+GGG | - | chr4.3:8275322-8275341 | None:intergenic | 15.0% |
| !!! | CTATTTTTTTGTTTCTTTTT+AGG | + | chr4.3:8272861-8272880 | MS.gene57378:CDS | 15.0% |
| !!! | TTTTTTTTTTTATGTTTCAG+GGG | + | chr4.3:8272717-8272736 | MS.gene57378:intron | 15.0% |
| !! | AAAAAAAAAAAATCAACAGC+AGG | - | chr4.3:8272781-8272800 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAATCAACAGCA+GGG | - | chr4.3:8272780-8272799 | None:intergenic | 20.0% |
| !! | AAATAGTATATATCATTCAG+TGG | - | chr4.3:8274784-8274803 | None:intergenic | 20.0% |
| !! | ACCAATAATATTGATATTGT+AGG | - | chr4.3:8275847-8275866 | None:intergenic | 20.0% |
| !! | ACTATAAAATAATGATTGGT+AGG | - | chr4.3:8276119-8276138 | None:intergenic | 20.0% |
| !! | CAATATTATAAAAACCATCA+TGG | + | chr4.3:8275321-8275340 | MS.gene57378:intron | 20.0% |
| !! | GTAAAGGTTTATTATTTCAT+AGG | + | chr4.3:8273462-8273481 | MS.gene57378:intron | 20.0% |
| !! | TATTTCTCTCTTTCATTAAA+TGG | - | chr4.3:8273102-8273121 | None:intergenic | 20.0% |
| !! | TCCGTTCAATTTATTAAAAT+AGG | + | chr4.3:8275377-8275396 | MS.gene57378:intron | 20.0% |
| !! | TCCTACAATATCAATATTAT+TGG | + | chr4.3:8275843-8275862 | MS.gene57378:intron | 20.0% |
| !! | TGATAATTCTTGCATTATAT+GGG | + | chr4.3:8273679-8273698 | MS.gene57378:CDS | 20.0% |
| !! | TGCAAAAAAGTAAGATAAAT+TGG | - | chr4.3:8274251-8274270 | None:intergenic | 20.0% |
| !! | TTGTTTATCTATTGATATAG+TGG | + | chr4.3:8276018-8276037 | MS.gene57378:intron | 20.0% |
| !! | TTTCAATGAAATGAATTTAC+CGG | - | chr4.3:8272634-8272653 | None:intergenic | 20.0% |
| !!! | AAGAAAATTATTGATTTCCT+AGG | + | chr4.3:8273211-8273230 | MS.gene57378:intron | 20.0% |
| !!! | AATGATAAAAAGTATGCTTT+TGG | - | chr4.3:8274992-8275011 | None:intergenic | 20.0% |
| !!! | ATGATAAAAAGTATGCTTTT+GGG | - | chr4.3:8274991-8275010 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTCTATTTCTTAT+TGG | + | chr4.3:8275874-8275893 | MS.gene57378:intron | 20.0% |
| !!! | CATGATGGTTTTTATAATAT+TGG | - | chr4.3:8275323-8275342 | None:intergenic | 20.0% |
| !!! | CCAATCATTATTTTATAGTT+CGG | + | chr4.3:8276120-8276139 | MS.gene57378:intron | 20.0% |
| !!! | GCCTATTTTAATAAATTGAA+CGG | - | chr4.3:8275381-8275400 | None:intergenic | 20.0% |
| !!! | TATACTATTTTCTTCCTTTA+TGG | + | chr4.3:8274794-8274813 | MS.gene57378:intron | 20.0% |
| !!! | TTGATAATTCTTGCATTATA+TGG | + | chr4.3:8273678-8273697 | MS.gene57378:CDS | 20.0% |
| !!! | TTTTTATAATATTGGGCAAA+AGG | - | chr4.3:8275315-8275334 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTCTTTTTAGGA+GGG | + | chr4.3:8272865-8272884 | MS.gene57378:CDS | 20.0% |
| !!! | TTTTTTTGTTTCTTTTTAGG+AGG | + | chr4.3:8272864-8272883 | MS.gene57378:CDS | 20.0% |
| ! | AAAAGTAGATATGGAAGTAA+AGG | + | chr4.3:8273446-8273465 | MS.gene57378:intron | 25.0% |
| ! | AACTAGTTATACATAGTTAC+TGG | - | chr4.3:8275231-8275250 | None:intergenic | 25.0% |
| ! | AATCATAGCATGAAATGAAA+GGG | - | chr4.3:8276553-8276572 | None:intergenic | 25.0% |
| ! | AATCTCTATGCAATTATGAT+AGG | - | chr4.3:8274559-8274578 | None:intergenic | 25.0% |
| ! | AATGTACAATGAATTCAATG+TGG | - | chr4.3:8276245-8276264 | None:intergenic | 25.0% |
| ! | ACCTTGGAATTCTTTAATAA+TGG | - | chr4.3:8274015-8274034 | None:intergenic | 25.0% |
| ! | AGAAATCTAATCAGAAACAT+TGG | - | chr4.3:8272843-8272862 | None:intergenic | 25.0% |
| ! | AGCTAAATAATGCAAATAAG+TGG | - | chr4.3:8272989-8273008 | None:intergenic | 25.0% |
| ! | ATAGTTTAGATGCAACTTAT+AGG | + | chr4.3:8274753-8274772 | MS.gene57378:intron | 25.0% |
| ! | ATTATATGGGATGTTAACAA+AGG | + | chr4.3:8273692-8273711 | MS.gene57378:CDS | 25.0% |
| ! | ATTATTTAACCTTGATATGC+AGG | + | chr4.3:8275101-8275120 | MS.gene57378:intron | 25.0% |
| ! | ATTGATGCAGTAAAACATAA+AGG | - | chr4.3:8273558-8273577 | None:intergenic | 25.0% |
| ! | CAAAATAAGAACTTGAAATG+TGG | + | chr4.3:8273259-8273278 | MS.gene57378:intron | 25.0% |
| ! | CCGAACTATAAAATAATGAT+TGG | - | chr4.3:8276123-8276142 | None:intergenic | 25.0% |
| ! | CCTGTATTATTTAAGCTTAA+GGG | + | chr4.3:8275178-8275197 | MS.gene57378:CDS | 25.0% |
| ! | TAGGGAAATTGAATATTGAT+TGG | + | chr4.3:8275585-8275604 | MS.gene57378:intron | 25.0% |
| ! | TATGATAGGATACTGAATTT+GGG | - | chr4.3:8274545-8274564 | None:intergenic | 25.0% |
| ! | TCACAATCTTTACTAATAAG+AGG | - | chr4.3:8275452-8275471 | None:intergenic | 25.0% |
| ! | TCCTGTATTATTTAAGCTTA+AGG | + | chr4.3:8275177-8275196 | MS.gene57378:CDS | 25.0% |
| ! | TGTGTATTATTCATTGCAAA+TGG | + | chr4.3:8274330-8274349 | MS.gene57378:intron | 25.0% |
| ! | TTACCTGGTAAATGTTATAA+CGG | + | chr4.3:8276332-8276351 | MS.gene57378:intron | 25.0% |
| ! | TTAGACAGGTTTATGTTATT+AGG | + | chr4.3:8275510-8275529 | MS.gene57378:intron | 25.0% |
| ! | TTATGATAGGATACTGAATT+TGG | - | chr4.3:8274546-8274565 | None:intergenic | 25.0% |
| ! | TTATTAGTAAAGATTGTGAG+AGG | + | chr4.3:8275453-8275472 | MS.gene57378:intron | 25.0% |
| ! | TTCCTGTGAATGAAATATAA+TGG | - | chr4.3:8274619-8274638 | None:intergenic | 25.0% |
| !! | ATGGGTTCTTTTAACAAATT+AGG | - | chr4.3:8275688-8275707 | None:intergenic | 25.0% |
| !! | ATTTTGTAAGAACCTGAAAT+GGG | - | chr4.3:8274878-8274897 | None:intergenic | 25.0% |
| !! | TTTCTAGAAAAGATCTTTCT+CGG | + | chr4.3:8274936-8274955 | MS.gene57378:CDS | 25.0% |
| !!! | ATTTCAGGTTCTTACAAAAT+CGG | + | chr4.3:8274878-8274897 | MS.gene57378:CDS | 25.0% |
| !!! | CAATTTTGTTGATTTCTTTC+CGG | + | chr4.3:8273423-8273442 | MS.gene57378:intron | 25.0% |
| !!! | GATGTTTTTTTTTTTGGGAA+AGG | + | chr4.3:8276384-8276403 | MS.gene57378:CDS | 25.0% |
| !!! | GTATGATTGATTTTTGTGAA+TGG | - | chr4.3:8273509-8273528 | None:intergenic | 25.0% |
| !!! | TTCTAGAACAATGTAGAAAA+GGG | - | chr4.3:8276601-8276620 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTCTTTTTAGGAG+GGG | + | chr4.3:8272866-8272885 | MS.gene57378:CDS | 25.0% |
| AAGCAATATACTTCCCTAAA+GGG | - | chr4.3:8273882-8273901 | None:intergenic | 30.0% | |
| AATATGGAAGCTACATTCAA+CGG | + | chr4.3:8272898-8272917 | MS.gene57378:CDS | 30.0% | |
| AATGCGATGATAAATAGAGA+AGG | + | chr4.3:8273127-8273146 | MS.gene57378:intron | 30.0% | |
| ACAGTTCACTAAACAACAAA+GGG | - | chr4.3:8274730-8274749 | None:intergenic | 30.0% | |
| ATAACATAAACCTGTCTAAC+TGG | - | chr4.3:8275509-8275528 | None:intergenic | 30.0% | |
| ATATTTCATTCACAGGAAAG+TGG | + | chr4.3:8274621-8274640 | MS.gene57378:intron | 30.0% | |
| ATGCGATGATAAATAGAGAA+GGG | + | chr4.3:8273128-8273147 | MS.gene57378:intron | 30.0% | |
| ATTGGATCAAGATTAACTTC+TGG | - | chr4.3:8274233-8274252 | None:intergenic | 30.0% | |
| CATCAATTAGCTGGTTAAAA+TGG | + | chr4.3:8273571-8273590 | MS.gene57378:intron | 30.0% | |
| CCCTTAAGCTTAAATAATAC+AGG | - | chr4.3:8275181-8275200 | None:intergenic | 30.0% | |
| CTATTGACATAAGTAACTAC+TGG | - | chr4.3:8272564-8272583 | None:intergenic | 30.0% | |
| CTGTTATAAAACAGAGGATA+GGG | - | chr4.3:8274468-8274487 | None:intergenic | 30.0% | |
| CTTAAAGTCTCTTAAAACTG+TGG | + | chr4.3:8274358-8274377 | MS.gene57378:intron | 30.0% | |
| GAATCATAGCATGAAATGAA+AGG | - | chr4.3:8276554-8276573 | None:intergenic | 30.0% | |
| GAGGAGAATGCTAAATAAAT+GGG | - | chr4.3:8276450-8276469 | None:intergenic | 30.0% | |
| GCCATTATTAAAGAATTCCA+AGG | + | chr4.3:8274011-8274030 | MS.gene57378:CDS | 30.0% | |
| GGATTTCTGTTATAAAACAG+AGG | - | chr4.3:8274474-8274493 | None:intergenic | 30.0% | |
| GTCCATTATATTTCATTCAC+AGG | + | chr4.3:8274614-8274633 | MS.gene57378:intron | 30.0% | |
| GTGAATAAGCTATTGCAATT+TGG | + | chr4.3:8274280-8274299 | MS.gene57378:intron | 30.0% | |
| TACAATTGAATTGCTTGAGT+GGG | + | chr4.3:8275265-8275284 | MS.gene57378:intron | 30.0% | |
| TCTGTTATAAAACAGAGGAT+AGG | - | chr4.3:8274469-8274488 | None:intergenic | 30.0% | |
| TGCTAACTAATTGTCGATAA+CGG | + | chr4.3:8273070-8273089 | MS.gene57378:intron | 30.0% | |
| TGTTATAAAACAGAGGATAG+GGG | - | chr4.3:8274467-8274486 | None:intergenic | 30.0% | |
| TTACAATTGAATTGCTTGAG+TGG | + | chr4.3:8275264-8275283 | MS.gene57378:intron | 30.0% | |
| TTTAAATGTAGAAGAAGCCA+AGG | - | chr4.3:8273359-8273378 | None:intergenic | 30.0% | |
| ! | AAGCTAATCTCTAAAGAAAG+AGG | - | chr4.3:8274162-8274181 | None:intergenic | 30.0% |
| ! | ACTCTAACACTCTTTTATTG+GGG | - | chr4.3:8275958-8275977 | None:intergenic | 30.0% |
| ! | AGCTAATCTCTAAAGAAAGA+GGG | - | chr4.3:8274161-8274180 | None:intergenic | 30.0% |
| ! | ATCAAGATTAACTTCTGGTT+AGG | - | chr4.3:8274228-8274247 | None:intergenic | 30.0% |
| ! | CACTCTAACACTCTTTTATT+GGG | - | chr4.3:8275959-8275978 | None:intergenic | 30.0% |
| ! | GATTTTGTAAGAACCTGAAA+TGG | - | chr4.3:8274879-8274898 | None:intergenic | 30.0% |
| ! | GTATTTGATTTCTCTGTAGA+TGG | + | chr4.3:8274057-8274076 | MS.gene57378:intron | 30.0% |
| ! | TAGATATCTAAAGCTAACCT+TGG | - | chr4.3:8274031-8274050 | None:intergenic | 30.0% |
| ! | TCACTCTAACACTCTTTTAT+TGG | - | chr4.3:8275960-8275979 | None:intergenic | 30.0% |
| ! | TCTTTCTTTAGAGATTAGCT+TGG | + | chr4.3:8274161-8274180 | MS.gene57378:intron | 30.0% |
| ! | TTTTGTAAGAACCTGAAATG+GGG | - | chr4.3:8274877-8274896 | None:intergenic | 30.0% |
| !! | AGAAGGGTATCAAAGAAAAA+AGG | + | chr4.3:8273144-8273163 | MS.gene57378:intron | 30.0% |
| !! | CTTCTAGAACAATGTAGAAA+AGG | - | chr4.3:8276602-8276621 | None:intergenic | 30.0% |
| !! | TACTTCCATATCTACTTTTC+CGG | - | chr4.3:8273445-8273464 | None:intergenic | 30.0% |
| !! | TATGTATAACTAGTTCTACG+TGG | + | chr4.3:8275236-8275255 | MS.gene57378:intron | 30.0% |
| !! | TGTTCTAGAAGAAAATGTCT+TGG | + | chr4.3:8276611-8276630 | MS.gene57378:intron | 30.0% |
| !! | TTGCAAGCATGTTATTTCTA+AGG | + | chr4.3:8273981-8274000 | MS.gene57378:CDS | 30.0% |
| !!! | CTGTTTTGTTTATTGCAGAT+GGG | + | chr4.3:8276182-8276201 | MS.gene57378:intron | 30.0% |
| AAGCTTAAGGGAACAAATTC+AGG | + | chr4.3:8275190-8275209 | MS.gene57378:CDS | 35.0% | |
| ACAAGTAGAAATGAACCATC+TGG | - | chr4.3:8274190-8274209 | None:intergenic | 35.0% | |
| ACCAAAACTCTCGAATTTCT+GGG | + | chr4.3:8275613-8275632 | MS.gene57378:intron | 35.0% | |
| AGATCCACTCCTAATATAGT+GGG | + | chr4.3:8275916-8275935 | MS.gene57378:intron | 35.0% | |
| AGTAAGCCCCATAAATCAAA+GGG | + | chr4.3:8273937-8273956 | MS.gene57378:CDS | 35.0% | |
| AGTTCACTAAACAACAAAGG+GGG | - | chr4.3:8274728-8274747 | None:intergenic | 35.0% | |
| ATAAGAACTTGAAATGTGGC+AGG | + | chr4.3:8273263-8273282 | MS.gene57378:intron | 35.0% | |
| ATGCAAATAAGTGGTCATCA+AGG | - | chr4.3:8272980-8272999 | None:intergenic | 35.0% | |
| ATGCTAAATAAATGGGCATC+AGG | - | chr4.3:8276443-8276462 | None:intergenic | 35.0% | |
| CACAGTCATCACATTCAATT+GGG | + | chr4.3:8274513-8274532 | MS.gene57378:intron | 35.0% | |
| CACAGTTCACTAAACAACAA+AGG | - | chr4.3:8274731-8274750 | None:intergenic | 35.0% | |
| CACATTTCAAACAAGCTGTA+AGG | + | chr4.3:8273330-8273349 | MS.gene57378:intron | 35.0% | |
| CAGTTCACTAAACAACAAAG+GGG | - | chr4.3:8274729-8274748 | None:intergenic | 35.0% | |
| CGAGGAGAATGCTAAATAAA+TGG | - | chr4.3:8276451-8276470 | None:intergenic | 35.0% | |
| GAAAAGGGAAATCAAAAACC+TGG | - | chr4.3:8276586-8276605 | None:intergenic | 35.0% | |
| GAAGCAATATACTTCCCTAA+AGG | - | chr4.3:8273883-8273902 | None:intergenic | 35.0% | |
| GACTGTGACAATATTCTGTT+AGG | - | chr4.3:8274500-8274519 | None:intergenic | 35.0% | |
| GCAAGAATTATCAACTGATC+CGG | - | chr4.3:8273672-8273691 | None:intergenic | 35.0% | |
| GGTTAGGAGTTCAAATAACT+CGG | - | chr4.3:8274407-8274426 | None:intergenic | 35.0% | |
| GTAGTCCGTATTTGTTCAAA+AGG | + | chr4.3:8276414-8276433 | MS.gene57378:CDS | 35.0% | |
| GTGACAATATTCTGTTAGGA+GGG | - | chr4.3:8274496-8274515 | None:intergenic | 35.0% | |
| GTTAGGAGTTCAAATAACTC+GGG | - | chr4.3:8274406-8274425 | None:intergenic | 35.0% | |
| TAAGCTGCATTTACAGATTC+AGG | - | chr4.3:8274911-8274930 | None:intergenic | 35.0% | |
| TACCAGGTAATATCTGTTAC+TGG | - | chr4.3:8276322-8276341 | None:intergenic | 35.0% | |
| TAGCCGTTATAACATTTACC+AGG | - | chr4.3:8276338-8276357 | None:intergenic | 35.0% | |
| TATTGCAATTTGGTAGAACC+TGG | + | chr4.3:8274290-8274309 | MS.gene57378:intron | 35.0% | |
| TATTGGGGTAAAACTCATGT+AGG | - | chr4.3:8275943-8275962 | None:intergenic | 35.0% | |
| TCACAGTCATCACATTCAAT+TGG | + | chr4.3:8274512-8274531 | MS.gene57378:intron | 35.0% | |
| TCTAGAAGAAAATGTCTTGG+AGG | + | chr4.3:8276614-8276633 | MS.gene57378:intron | 35.0% | |
| TCTCCAATAGCAATATTTGC+TGG | + | chr4.3:8276283-8276302 | MS.gene57378:CDS | 35.0% | |
| TCTGAATTAGATCTCATGTC+AGG | + | chr4.3:8273601-8273620 | MS.gene57378:intron | 35.0% | |
| TCTTAAGAACCTTCCATGTT+TGG | - | chr4.3:8272931-8272950 | None:intergenic | 35.0% | |
| TCTTTCCGGAAAAGTAGATA+TGG | + | chr4.3:8273437-8273456 | MS.gene57378:intron | 35.0% | |
| TGACAATATTCTGTTAGGAG+GGG | - | chr4.3:8274495-8274514 | None:intergenic | 35.0% | |
| TGCTTACTTGATAAGCAGTA+AGG | - | chr4.3:8276525-8276544 | None:intergenic | 35.0% | |
| TGGAAGGTTCTTAAGATGTA+CGG | + | chr4.3:8272935-8272954 | MS.gene57378:intron | 35.0% | |
| TGTGACAATATTCTGTTAGG+AGG | - | chr4.3:8274497-8274516 | None:intergenic | 35.0% | |
| TTATGGTCAGTTAAACCTTC+TGG | + | chr4.3:8272522-8272541 | MS.gene57378:CDS | 35.0% | |
| TTCTGAACATGCTTTAACAG+TGG | + | chr4.3:8273737-8273756 | MS.gene57378:intron | 35.0% | |
| ! | AGGTTAGTTCCTGACATAAA+TGG | - | chr4.3:8273812-8273831 | None:intergenic | 35.0% |
| ! | AGTGAGTAAAGCATTCAGTT+AGG | - | chr4.3:8274444-8274463 | None:intergenic | 35.0% |
| ! | CTATGATTCTAACTTGTACC+AGG | + | chr4.3:8276565-8276584 | MS.gene57378:intron | 35.0% |
| ! | CTCAACACCCTTTGATTTAT+GGG | - | chr4.3:8273947-8273966 | None:intergenic | 35.0% |
| ! | GGTGACCTTTTGAACAAATA+CGG | - | chr4.3:8276422-8276441 | None:intergenic | 35.0% |
| ! | GTTTTACTGCATCAATTAGC+TGG | + | chr4.3:8273562-8273581 | MS.gene57378:intron | 35.0% |
| ! | TCAACACCCTTTGATTTATG+GGG | - | chr4.3:8273946-8273965 | None:intergenic | 35.0% |
| ! | TCTCAACACCCTTTGATTTA+TGG | - | chr4.3:8273948-8273967 | None:intergenic | 35.0% |
| ! | TTGTAGCAGAAAGCATGAAA+TGG | + | chr4.3:8276700-8276719 | MS.gene57378:CDS | 35.0% |
| !! | AAGAGTGTTAGAGTGAGTAT+TGG | + | chr4.3:8275964-8275983 | MS.gene57378:intron | 35.0% |
| !! | ATTGTAGTTCTGAACAAGCT+TGG | + | chr4.3:8273763-8273782 | MS.gene57378:intron | 35.0% |
| !! | GATGGTGGATATATCATATC+CGG | + | chr4.3:8273650-8273669 | MS.gene57378:CDS | 35.0% |
| !!! | GCTGTTTTGTTTATTGCAGA+TGG | + | chr4.3:8276181-8276200 | MS.gene57378:intron | 35.0% |
| AACAAGCTGTAAGGTTTCCT+TGG | + | chr4.3:8273339-8273358 | MS.gene57378:intron | 40.0% | |
| AAGAGGGCAATGTTTCATCA+TGG | - | chr4.3:8274145-8274164 | None:intergenic | 40.0% | |
| AAGCTACATTCAACGGATAC+CGG | + | chr4.3:8272905-8272924 | MS.gene57378:CDS | 40.0% | |
| ACGGCAAATACAATGCGATA+TGG | - | chr4.3:8276220-8276239 | None:intergenic | 40.0% | |
| AGCAAAGCAGGAATCCATAA+AGG | - | chr4.3:8274811-8274830 | None:intergenic | 40.0% | |
| AGGATACTGAATTTGGGCTT+TGG | - | chr4.3:8274539-8274558 | None:intergenic | 40.0% | |
| AGGCCAGCAAATATTGCTAT+TGG | - | chr4.3:8276289-8276308 | None:intergenic | 40.0% | |
| ATATCGCATTGTATTTGCCG+TGG | + | chr4.3:8276219-8276238 | MS.gene57378:CDS | 40.0% | |
| CAATGAATTCAATGTGGCCA+CGG | - | chr4.3:8276239-8276258 | None:intergenic | 40.0% | |
| CAGTAAGCCCCATAAATCAA+AGG | + | chr4.3:8273936-8273955 | MS.gene57378:CDS | 40.0% | |
| CATGTAGGTCCCACTATATT+AGG | - | chr4.3:8275928-8275947 | None:intergenic | 40.0% | |
| CGGCAAATACAATGCGATAT+GGG | - | chr4.3:8276219-8276238 | None:intergenic | 40.0% | |
| CTCCAGTAACAGATATTACC+TGG | + | chr4.3:8276317-8276336 | MS.gene57378:intron | 40.0% | |
| GACCAAAACTCTCGAATTTC+TGG | + | chr4.3:8275612-8275631 | MS.gene57378:intron | 40.0% | |
| GAGATCCACTCCTAATATAG+TGG | + | chr4.3:8275915-8275934 | MS.gene57378:intron | 40.0% | |
| GAGTTCGAAAATGACGAACT+TGG | + | chr4.3:8276495-8276514 | MS.gene57378:CDS | 40.0% | |
| GATCTCATGTCAGGACATTA+TGG | + | chr4.3:8273610-8273629 | MS.gene57378:intron | 40.0% | |
| GCACTTGTTCCATTTATGTC+AGG | + | chr4.3:8273800-8273819 | MS.gene57378:intron | 40.0% | |
| GGAGGGGTGAATTGTTAATA+TGG | + | chr4.3:8272882-8272901 | MS.gene57378:CDS | 40.0% | |
| GGGGCTTACTGATGTAAATT+CGG | - | chr4.3:8273927-8273946 | None:intergenic | 40.0% | |
| GTTATTCGCTTCTCTTCTTC+CGG | + | chr4.3:8272612-8272631 | MS.gene57378:CDS | 40.0% | |
| TGATGTAAATTCGGCAAGTC+CGG | - | chr4.3:8273918-8273937 | None:intergenic | 40.0% | |
| TTGGTAGAACCTGGAAAATC+AGG | + | chr4.3:8274299-8274318 | MS.gene57378:intron | 40.0% | |
| TTGTCACATACACTGACATC+AGG | + | chr4.3:8274081-8274100 | MS.gene57378:intron | 40.0% | |
| ! | AGCTTCTTTTGTGATCCAGA+AGG | - | chr4.3:8272540-8272559 | None:intergenic | 40.0% |
| ! | AGTTGTTTGCCTGATTTTCC+AGG | - | chr4.3:8274311-8274330 | None:intergenic | 40.0% |
| ! | CTCACGTCACTAACATGTTT+TGG | - | chr4.3:8275074-8275093 | None:intergenic | 40.0% |
| ! | TCCCAGAAATTCGAGAGTTT+TGG | - | chr4.3:8275617-8275636 | None:intergenic | 40.0% |
| !! | AACCGAATCATCGACTTGAT+CGG | - | chr4.3:8276072-8276091 | None:intergenic | 40.0% |
| !! | AACTCTCGAATTTCTGGGAT+AGG | + | chr4.3:8275618-8275637 | MS.gene57378:intron | 40.0% |
| !! | AAGTTGTTTTGCACGAACCT+AGG | - | chr4.3:8273231-8273250 | None:intergenic | 40.0% |
| !! | AGTTAGGAGAAAGTACTCTC+TGG | - | chr4.3:8274428-8274447 | None:intergenic | 40.0% |
| !! | GCAGGTTTTGTGAATTTGGT+TGG | + | chr4.3:8273281-8273300 | MS.gene57378:intron | 40.0% |
| !! | TGTGGCAGGTTTTGTGAATT+TGG | + | chr4.3:8273277-8273296 | MS.gene57378:intron | 40.0% |
| !! | TTGCTTCTCTTAGTTCTGAC+CGG | + | chr4.3:8273896-8273915 | MS.gene57378:CDS | 40.0% |
| !! | TTGGTGATCTCCCGTTTTAT+CGG | + | chr4.3:8275893-8275912 | MS.gene57378:intron | 40.0% |
| !! | TTGTTAGCTTCTGGTTCTGA+TGG | + | chr4.3:8272742-8272761 | MS.gene57378:CDS | 40.0% |
| AAATAGGCATGCTGACGAAC+TGG | + | chr4.3:8275393-8275412 | MS.gene57378:intron | 45.0% | |
| AAGAACCTTCCATGTTTGGC+CGG | - | chr4.3:8272927-8272946 | None:intergenic | 45.0% | |
| AATGATGCTGTACTGCCAAC+TGG | + | chr4.3:8276663-8276682 | MS.gene57378:CDS | 45.0% | |
| ACAACAGCTTTGCTTGCACA+CGG | - | chr4.3:8275142-8275161 | None:intergenic | 45.0% | |
| ACCCATGCACACTATGTTCA+GGG | + | chr4.3:8273845-8273864 | MS.gene57378:CDS | 45.0% | |
| AGATGGTTTCTGCTCTTTGG+TGG | + | chr4.3:8276473-8276492 | MS.gene57378:CDS | 45.0% | |
| AGCCTAGAGGTTCAAGTGAA+TGG | + | chr4.3:8275477-8275496 | MS.gene57378:intron | 45.0% | |
| AGGAACTAACCTTCAGACGT+TGG | + | chr4.3:8273820-8273839 | MS.gene57378:intron | 45.0% | |
| AGGTCCCACTATATTAGGAG+TGG | - | chr4.3:8275923-8275942 | None:intergenic | 45.0% | |
| AGTTATCGCAGGACAGAGAA+TGG | - | chr4.3:8275707-8275726 | None:intergenic | 45.0% | |
| AGTTGGCAGTACAGCATCAT+TGG | - | chr4.3:8276664-8276683 | None:intergenic | 45.0% | |
| ATGATGCTGTACTGCCAACT+GGG | + | chr4.3:8276664-8276683 | MS.gene57378:CDS | 45.0% | |
| ATGGTCTGAACCAGTTAGAC+AGG | + | chr4.3:8275496-8275515 | MS.gene57378:intron | 45.0% | |
| ATGTCAGGACATTATGGACC+TGG | + | chr4.3:8273616-8273635 | MS.gene57378:CDS | 45.0% | |
| CATCATGGACCAGTTTGACT+GGG | + | chr4.3:8275336-8275355 | MS.gene57378:intron | 45.0% | |
| CCATGTAGCAAAAGCAAAGC+AGG | - | chr4.3:8274823-8274842 | None:intergenic | 45.0% | |
| CTGTTACTGGAGCATAGTGA+AGG | - | chr4.3:8276309-8276328 | None:intergenic | 45.0% | |
| GACCATTCACTTGAACCTCT+AGG | - | chr4.3:8275482-8275501 | None:intergenic | 45.0% | |
| GAGGTCTAACAATTCTTCGC+CGG | - | chr4.3:8275433-8275452 | None:intergenic | 45.0% | |
| GAGTGGATCTCCGATAAAAC+GGG | - | chr4.3:8275906-8275925 | None:intergenic | 45.0% | |
| GCAAGATGGTTTCTGCTCTT+TGG | + | chr4.3:8276470-8276489 | MS.gene57378:CDS | 45.0% | |
| GGAGTGGATCTCCGATAAAA+CGG | - | chr4.3:8275907-8275926 | None:intergenic | 45.0% | |
| GGGGGAAATTAAAAGCTGTC+TGG | - | chr4.3:8274710-8274729 | None:intergenic | 45.0% | |
| GTTATCGCAGGACAGAGAAT+GGG | - | chr4.3:8275706-8275725 | None:intergenic | 45.0% | |
| TACCCATGCACACTATGTTC+AGG | + | chr4.3:8273844-8273863 | MS.gene57378:CDS | 45.0% | |
| TATAGCAGGCCTGCATATCA+AGG | - | chr4.3:8275113-8275132 | None:intergenic | 45.0% | |
| TATAGTTCGGCCTCTTTCAG+AGG | + | chr4.3:8276133-8276152 | MS.gene57378:intron | 45.0% | |
| TCATTTCTACTTGTGCCTGC+AGG | + | chr4.3:8274196-8274215 | MS.gene57378:intron | 45.0% | |
| TCTCACTTCACAGTTATCGC+AGG | - | chr4.3:8275718-8275737 | None:intergenic | 45.0% | |
| TGAATTGCTTGAGTGGGATG+TGG | + | chr4.3:8275271-8275290 | MS.gene57378:intron | 45.0% | |
| TTAGCATTCTCCTCGCAAGA+TGG | + | chr4.3:8276456-8276475 | MS.gene57378:CDS | 45.0% | |
| ! | ACTGGTTCATGTCACAAAGC+CGG | + | chr4.3:8275411-8275430 | MS.gene57378:intron | 45.0% |
| ! | AGCATCATTGGCTGTCTGAA+GGG | - | chr4.3:8276652-8276671 | None:intergenic | 45.0% |
| ! | GACAATGCATCCTCTGAAAG+AGG | - | chr4.3:8276146-8276165 | None:intergenic | 45.0% |
| ! | TCAGGGGAATTGTTAGCTTC+TGG | + | chr4.3:8272733-8272752 | MS.gene57378:intron | 45.0% |
| !! | ACCGAATCATCGACTTGATC+GGG | - | chr4.3:8276071-8276090 | None:intergenic | 45.0% |
| !! | AGATTAGCTTGGTCTCCAGA+TGG | + | chr4.3:8274172-8274191 | MS.gene57378:intron | 45.0% |
| !! | CCTGCTTTGCTTTTGCTACA+TGG | + | chr4.3:8274820-8274839 | MS.gene57378:intron | 45.0% |
| !! | GGAGAAAGTACTCTCTGGTT+AGG | - | chr4.3:8274423-8274442 | None:intergenic | 45.0% |
| ACCCCTGAACATAGTGTGCA+TGG | - | chr4.3:8273850-8273869 | None:intergenic | 50.0% | |
| ACTATGTTCAGGGGTAGCCT+GGG | + | chr4.3:8273855-8273874 | MS.gene57378:CDS | 50.0% | |
| AGAGCAGAAACCATCTTGCG+AGG | - | chr4.3:8276469-8276488 | None:intergenic | 50.0% | |
| AGGACATTATGGACCTGGAG+TGG | + | chr4.3:8273621-8273640 | MS.gene57378:CDS | 50.0% | |
| AGTGCTAGCAACACTCACTC+TGG | + | chr4.3:8275813-8275832 | MS.gene57378:intron | 50.0% | |
| ATACTTCCCTAAAGGGTCCC+AGG | - | chr4.3:8273875-8273894 | None:intergenic | 50.0% | |
| CATGGGTATCCAACGTCTGA+AGG | - | chr4.3:8273832-8273851 | None:intergenic | 50.0% | |
| CCAGTCAAACTGGTCCATGA+TGG | - | chr4.3:8275338-8275357 | None:intergenic | 50.0% | |
| CCATCATGGACCAGTTTGAC+TGG | + | chr4.3:8275335-8275354 | MS.gene57378:intron | 50.0% | |
| CCCATGCACACTATGTTCAG+GGG | + | chr4.3:8273846-8273865 | MS.gene57378:CDS | 50.0% | |
| CCCCGATCAAGTCGATGATT+CGG | + | chr4.3:8276067-8276086 | MS.gene57378:intron | 50.0% | |
| CCCCTGAACATAGTGTGCAT+GGG | - | chr4.3:8273849-8273868 | None:intergenic | 50.0% | |
| CTGGTTAGGTGAATACCTGC+AGG | - | chr4.3:8274214-8274233 | None:intergenic | 50.0% | |
| TCACAGGAAAGTGGACGAAG+TGG | + | chr4.3:8274630-8274649 | MS.gene57378:intron | 50.0% | |
| TCACGTCTCTACCCCATTTC+AGG | + | chr4.3:8274863-8274882 | MS.gene57378:CDS | 50.0% | |
| ! | CAGCATCATTGGCTGTCTGA+AGG | - | chr4.3:8276653-8276672 | None:intergenic | 50.0% |
| !! | ATCGACTTGATCGGGGTACA+AGG | - | chr4.3:8276063-8276082 | None:intergenic | 50.0% |
| !! | CCGAATCATCGACTTGATCG+GGG | - | chr4.3:8276070-8276089 | None:intergenic | 50.0% |
| ACTGCACCAACACTCCCAGT+TGG | - | chr4.3:8276681-8276700 | None:intergenic | 55.0% | |
| CAACGGATACCGGCCAAACA+TGG | + | chr4.3:8272915-8272934 | MS.gene57378:CDS | 55.0% | |
| CACCATCAGTAGACCACTCC+AGG | - | chr4.3:8273637-8273656 | None:intergenic | 55.0% | |
| CACTATGTTCAGGGGTAGCC+TGG | + | chr4.3:8273854-8273873 | MS.gene57378:CDS | 55.0% | |
| CTGGAGTGGTCTACTGATGG+TGG | + | chr4.3:8273635-8273654 | MS.gene57378:CDS | 55.0% | |
| GACCTGGAGTGGTCTACTGA+TGG | + | chr4.3:8273632-8273651 | MS.gene57378:CDS | 55.0% | |
| GATTGTGAGAGGCAGCCTAG+AGG | + | chr4.3:8275464-8275483 | MS.gene57378:intron | 55.0% | |
| GCACACGGAAGCTGTATAGC+AGG | - | chr4.3:8275127-8275146 | None:intergenic | 55.0% | |
| GGATACCGGCCAAACATGGA+AGG | + | chr4.3:8272919-8272938 | MS.gene57378:CDS | 55.0% | |
| TGTCCAGCTCCCAGTCAAAC+TGG | - | chr4.3:8275348-8275367 | None:intergenic | 55.0% | |
| ! | GTACTGCCAACTGGGAGTGT+TGG | + | chr4.3:8276672-8276691 | MS.gene57378:CDS | 55.0% |
| CTGGGAGCTGGACACATGTC+TGG | + | chr4.3:8275354-8275373 | MS.gene57378:intron | 60.0% | |
| GGACCAGTTTGACTGGGAGC+TGG | + | chr4.3:8275342-8275361 | MS.gene57378:intron | 60.0% | |
| GGGTAGCCTGGGACCCTTTA+GGG | + | chr4.3:8273866-8273885 | MS.gene57378:CDS | 60.0% | |
| GGGGTAGCCTGGGACCCTTT+AGG | + | chr4.3:8273865-8273884 | MS.gene57378:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 8272522 | 8276724 | 8272522 | ID=MS.gene57378 |
| chr4.3 | mRNA | 8272522 | 8276724 | 8272522 | ID=MS.gene57378.t1;Parent=MS.gene57378 |
| chr4.3 | exon | 8272522 | 8272633 | 8272522 | ID=MS.gene57378.t1.exon1;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8272522 | 8272633 | 8272522 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8272737 | 8272783 | 8272737 | ID=MS.gene57378.t1.exon2;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8272737 | 8272783 | 8272737 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8272857 | 8272940 | 8272857 | ID=MS.gene57378.t1.exon3;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8272857 | 8272940 | 8272857 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8273611 | 8273713 | 8273611 | ID=MS.gene57378.t1.exon4;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8273611 | 8273713 | 8273611 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8273836 | 8274032 | 8273836 | ID=MS.gene57378.t1.exon5;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8273836 | 8274032 | 8273836 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8274122 | 8274177 | 8274122 | ID=MS.gene57378.t1.exon6;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8274122 | 8274177 | 8274122 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8274862 | 8274957 | 8274862 | ID=MS.gene57378.t1.exon7;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8274862 | 8274957 | 8274862 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8275123 | 8275211 | 8275123 | ID=MS.gene57378.t1.exon8;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8275123 | 8275211 | 8275123 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8276200 | 8276321 | 8276200 | ID=MS.gene57378.t1.exon9;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8276200 | 8276321 | 8276200 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8276378 | 8276537 | 8276378 | ID=MS.gene57378.t1.exon10;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8276378 | 8276537 | 8276378 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| chr4.3 | exon | 8276619 | 8276724 | 8276619 | ID=MS.gene57378.t1.exon11;Parent=MS.gene57378.t1 |
| chr4.3 | CDS | 8276619 | 8276724 | 8276619 | ID=cds.MS.gene57378.t1;Parent=MS.gene57378.t1 |
| Gene Sequence |
| Protein sequence |
