Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75421.t1 | P29828.1 | 100 | 512 | 0 | 0 | 1 | 512 | 1 | 512 | 1.60E-295 | 1024.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75421.t1 | P29828 | 100.0 | 512 | 0 | 0 | 1 | 512 | 1 | 512 | 3.7e-298 | 1024.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75421.t1 | A0A072V0J2 | 97.1 | 513 | 14 | 1 | 1 | 512 | 1 | 513 | 1.5e-287 | 997.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75421.t1 | MTR_3g088220 | 97.076 | 513 | 14 | 1 | 1 | 512 | 1 | 513 | 0.0 | 1014 |
MS.gene75421.t1 | MTR_2g094180 | 34.091 | 484 | 294 | 15 | 35 | 510 | 80 | 546 | 6.66e-68 | 228 |
MS.gene75421.t1 | MTR_4g059450 | 33.895 | 475 | 276 | 16 | 25 | 483 | 93 | 545 | 5.07e-63 | 216 |
MS.gene75421.t1 | MTR_2g101880 | 27.333 | 450 | 297 | 13 | 26 | 463 | 55 | 486 | 5.30e-42 | 157 |
MS.gene75421.t1 | MTR_1g096790 | 47.458 | 118 | 56 | 3 | 24 | 141 | 19 | 130 | 3.45e-27 | 114 |
MS.gene75421.t1 | MTR_1g096790 | 30.252 | 119 | 78 | 3 | 365 | 482 | 16 | 130 | 2.77e-11 | 65.9 |
MS.gene75421.t1 | MTR_1g087520 | 48.544 | 103 | 52 | 1 | 379 | 480 | 149 | 251 | 9.85e-23 | 100 |
MS.gene75421.t1 | MTR_1g087520 | 46.809 | 94 | 47 | 2 | 53 | 146 | 168 | 258 | 7.83e-20 | 91.7 |
MS.gene75421.t1 | MTR_1g087520 | 42.991 | 107 | 58 | 2 | 38 | 144 | 34 | 137 | 1.46e-19 | 90.9 |
MS.gene75421.t1 | MTR_1g087520 | 41.860 | 86 | 49 | 1 | 396 | 480 | 47 | 132 | 1.27e-15 | 79.0 |
MS.gene75421.t1 | MTR_7g112040 | 35.795 | 176 | 101 | 4 | 10 | 176 | 1 | 173 | 3.33e-21 | 95.5 |
MS.gene75421.t1 | MTR_7g112040 | 42.991 | 107 | 56 | 2 | 387 | 488 | 152 | 258 | 7.27e-18 | 85.5 |
MS.gene75421.t1 | MTR_7g112040 | 43.299 | 97 | 52 | 2 | 53 | 149 | 163 | 256 | 5.61e-16 | 79.7 |
MS.gene75421.t1 | MTR_7g112040 | 37.864 | 103 | 62 | 2 | 379 | 480 | 26 | 127 | 3.71e-15 | 77.4 |
MS.gene75421.t1 | MTR_2g093500 | 24.324 | 370 | 211 | 13 | 105 | 463 | 175 | 486 | 3.77e-19 | 90.9 |
MS.gene75421.t1 | MTR_5g084930 | 42.202 | 109 | 56 | 4 | 35 | 142 | 30 | 132 | 1.08e-16 | 82.8 |
MS.gene75421.t1 | MTR_5g084930 | 33.889 | 180 | 100 | 7 | 38 | 203 | 163 | 337 | 1.39e-16 | 82.4 |
MS.gene75421.t1 | MTR_5g084930 | 34.286 | 105 | 67 | 1 | 375 | 479 | 26 | 128 | 3.90e-12 | 68.6 |
MS.gene75421.t1 | MTR_2g021750 | 40.690 | 145 | 70 | 7 | 1 | 142 | 1 | 132 | 1.44e-16 | 81.6 |
MS.gene75421.t1 | MTR_4g080800 | 36.434 | 129 | 67 | 4 | 25 | 140 | 133 | 259 | 5.11e-16 | 80.9 |
MS.gene75421.t1 | MTR_2g083260 | 32.500 | 120 | 64 | 5 | 34 | 140 | 144 | 259 | 6.36e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75421.t1 | AT1G21750 | 70.417 | 480 | 138 | 2 | 11 | 488 | 8 | 485 | 0.0 | 695 |
MS.gene75421.t1 | AT1G77510 | 68.303 | 489 | 147 | 3 | 28 | 512 | 24 | 508 | 0.0 | 693 |
MS.gene75421.t1 | AT1G21750 | 69.767 | 473 | 139 | 2 | 11 | 481 | 8 | 478 | 0.0 | 678 |
MS.gene75421.t1 | AT1G21750 | 37.615 | 109 | 61 | 4 | 398 | 502 | 50 | 155 | 1.46e-15 | 79.7 |
MS.gene75421.t1 | AT5G60640 | 33.902 | 469 | 265 | 14 | 35 | 483 | 105 | 548 | 5.46e-68 | 229 |
MS.gene75421.t1 | AT5G60640 | 34.298 | 449 | 253 | 13 | 35 | 466 | 105 | 528 | 6.02e-68 | 228 |
MS.gene75421.t1 | AT5G60640 | 42.478 | 113 | 62 | 3 | 370 | 482 | 96 | 205 | 2.97e-19 | 91.3 |
MS.gene75421.t1 | AT3G54960 | 29.352 | 494 | 318 | 13 | 35 | 512 | 101 | 579 | 2.59e-56 | 197 |
MS.gene75421.t1 | AT3G54960 | 30.529 | 416 | 269 | 10 | 35 | 443 | 101 | 503 | 3.31e-54 | 191 |
MS.gene75421.t1 | AT3G54960 | 31.897 | 116 | 72 | 3 | 369 | 482 | 91 | 201 | 2.57e-12 | 69.7 |
MS.gene75421.t1 | AT5G60640 | 31.250 | 464 | 220 | 14 | 35 | 483 | 105 | 484 | 1.42e-52 | 187 |
MS.gene75421.t1 | AT5G60640 | 42.478 | 113 | 62 | 3 | 370 | 482 | 96 | 205 | 1.88e-19 | 92.0 |
MS.gene75421.t1 | AT3G16110 | 27.105 | 487 | 321 | 17 | 19 | 488 | 61 | 530 | 6.36e-45 | 166 |
MS.gene75421.t1 | AT1G52260 | 26.829 | 492 | 327 | 16 | 19 | 494 | 63 | 537 | 4.18e-42 | 158 |
MS.gene75421.t1 | AT1G35620 | 28.212 | 358 | 198 | 14 | 35 | 363 | 34 | 361 | 3.57e-26 | 111 |
MS.gene75421.t1 | AT2G47470 | 39.189 | 148 | 78 | 4 | 38 | 176 | 28 | 172 | 8.72e-23 | 98.2 |
MS.gene75421.t1 | AT2G47470 | 42.241 | 116 | 62 | 2 | 366 | 480 | 134 | 245 | 1.84e-21 | 94.4 |
MS.gene75421.t1 | AT2G47470 | 41.441 | 111 | 61 | 3 | 35 | 144 | 143 | 250 | 5.42e-18 | 84.3 |
MS.gene75421.t1 | AT2G47470 | 40.909 | 88 | 51 | 1 | 396 | 482 | 41 | 128 | 5.89e-16 | 78.6 |
MS.gene75421.t1 | AT2G47470 | 39.189 | 148 | 78 | 4 | 38 | 176 | 28 | 172 | 1.66e-22 | 98.6 |
MS.gene75421.t1 | AT2G47470 | 42.241 | 116 | 62 | 2 | 366 | 480 | 134 | 245 | 3.80e-21 | 94.7 |
MS.gene75421.t1 | AT2G47470 | 40.708 | 113 | 63 | 3 | 35 | 146 | 143 | 252 | 1.05e-17 | 84.7 |
MS.gene75421.t1 | AT2G47470 | 40.909 | 88 | 51 | 1 | 396 | 482 | 41 | 128 | 9.73e-16 | 79.0 |
MS.gene75421.t1 | AT2G47470 | 39.189 | 148 | 78 | 4 | 38 | 176 | 28 | 172 | 2.52e-22 | 98.6 |
MS.gene75421.t1 | AT2G47470 | 42.241 | 116 | 62 | 2 | 366 | 480 | 134 | 245 | 5.23e-21 | 94.7 |
MS.gene75421.t1 | AT2G47470 | 40.708 | 113 | 63 | 3 | 35 | 146 | 143 | 252 | 1.05e-17 | 84.7 |
MS.gene75421.t1 | AT2G47470 | 40.909 | 88 | 51 | 1 | 396 | 482 | 41 | 128 | 1.19e-15 | 78.6 |
MS.gene75421.t1 | AT2G47470 | 39.189 | 148 | 78 | 4 | 38 | 176 | 28 | 172 | 3.05e-22 | 98.6 |
MS.gene75421.t1 | AT2G47470 | 42.241 | 116 | 62 | 2 | 366 | 480 | 134 | 245 | 6.33e-21 | 94.7 |
MS.gene75421.t1 | AT2G47470 | 40.708 | 113 | 63 | 3 | 35 | 146 | 143 | 252 | 1.20e-17 | 85.1 |
MS.gene75421.t1 | AT2G47470 | 40.909 | 88 | 51 | 1 | 396 | 482 | 41 | 128 | 1.31e-15 | 79.0 |
MS.gene75421.t1 | AT1G04980 | 33.889 | 180 | 100 | 8 | 38 | 203 | 172 | 346 | 6.55e-17 | 83.6 |
MS.gene75421.t1 | AT1G04980 | 40.367 | 109 | 58 | 4 | 35 | 142 | 34 | 136 | 1.73e-15 | 79.3 |
MS.gene75421.t1 | AT2G32920 | 40.367 | 109 | 58 | 4 | 35 | 142 | 32 | 134 | 9.11e-16 | 80.1 |
MS.gene75421.t1 | AT2G32920 | 34.752 | 141 | 81 | 5 | 38 | 172 | 167 | 302 | 3.65e-15 | 78.2 |
MS.gene75421.t1 | AT2G32920 | 32.407 | 108 | 71 | 1 | 375 | 482 | 28 | 133 | 9.28e-11 | 64.3 |
MS.gene75421.t1 | AT4G27080 | 32.374 | 139 | 79 | 3 | 24 | 149 | 184 | 320 | 4.41e-14 | 75.1 |
MS.gene75421.t1 | AT4G27080 | 32.374 | 139 | 79 | 3 | 24 | 149 | 132 | 268 | 4.90e-14 | 74.7 |
MS.gene75421.t1 | AT3G20560 | 30.935 | 139 | 81 | 4 | 24 | 149 | 132 | 268 | 6.41e-11 | 65.1 |
Find 102 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGGCTGAGCAGCAGCTTT+TGG | 0.236971 | 3.3:-73417637 | None:intergenic |
TACTCCTCACCAGAAAATTT+AGG | 0.250008 | 3.3:-73415475 | None:intergenic |
ACAGGCTCGTTGTTAGTTTC+AGG | 0.252165 | 3.3:-73416616 | None:intergenic |
GTCTAGTCAAGGTGCCTTCC+AGG | 0.260429 | 3.3:+73416170 | MS.gene75421:CDS |
TGCCCAACCACCACTTTAAC+AGG | 0.301970 | 3.3:-73416634 | None:intergenic |
GTCTTTGTTGTGCTCCTCAT+TGG | 0.323294 | 3.3:-73415123 | None:intergenic |
TGTATTGCTCAGCAACTTCA+TGG | 0.334195 | 3.3:-73416110 | None:intergenic |
TCACGAGCCACCAGTTGTTT+TGG | 0.334237 | 3.3:+73415088 | MS.gene75421:CDS |
GTCTCCCTTTGGAAGGTGTT+TGG | 0.343850 | 3.3:-73415563 | None:intergenic |
GAGTTGATCAAGTTCCAAAT+TGG | 0.343877 | 3.3:-73416360 | None:intergenic |
ACTCCTCACCAGAAAATTTA+GGG | 0.352150 | 3.3:-73415474 | None:intergenic |
TTAAAGAATTTGACAACAAA+AGG | 0.352716 | 3.3:-73415829 | None:intergenic |
TGATGTTGTTATTGCAAAAC+TGG | 0.365176 | 3.3:+73417321 | MS.gene75421:CDS |
CAAGCAGTTGGCTCCAATCT+TGG | 0.367623 | 3.3:+73417267 | MS.gene75421:CDS |
GCCATTTGACGAGCTCTTTG+TGG | 0.369578 | 3.3:+73415621 | MS.gene75421:CDS |
TCGTTGTTAGTTTCAGGAAT+AGG | 0.375808 | 3.3:-73416610 | None:intergenic |
GCTATCCAACCTTGTACTTC+AGG | 0.376133 | 3.3:+73417500 | MS.gene75421:CDS |
CAGTGTCTGGGCCTGTGGTT+AGG | 0.379777 | 3.3:+73415590 | MS.gene75421:CDS |
CGCATCGGAAAATGATGTTA+AGG | 0.381775 | 3.3:+73415148 | MS.gene75421:CDS |
CAGGGAGTTAGCTTTCTTGT+TGG | 0.387505 | 3.3:+73416138 | MS.gene75421:CDS |
TGCTGAGCAATACAAACAAC+AGG | 0.397715 | 3.3:+73416119 | MS.gene75421:CDS |
TGTTGAAGACAGTCACAATT+GGG | 0.401921 | 3.3:-73415789 | None:intergenic |
GAAAAGAACAAGGATAAAAC+TGG | 0.414524 | 3.3:+73417589 | MS.gene75421:CDS |
AAGGGAGACTCATCAGTGTC+TGG | 0.415024 | 3.3:+73415577 | MS.gene75421:CDS |
GATTTAATTTCTGTGGATGC+AGG | 0.425225 | 3.3:-73415278 | None:intergenic |
TTGTTGAAGACAGTCACAAT+TGG | 0.426153 | 3.3:-73415790 | None:intergenic |
AACAATACCTTCAGCTTCAC+GGG | 0.431815 | 3.3:-73415231 | None:intergenic |
GACAGTCACAATTGGGGTAC+TGG | 0.434634 | 3.3:-73415782 | None:intergenic |
GACACTGATGAGTCTCCCTT+TGG | 0.436072 | 3.3:-73415574 | None:intergenic |
TTATGCTGAATAATAATTAG+AGG | 0.445027 | 3.3:-73416314 | None:intergenic |
AGTTGATCAAGTTCCAAATT+GGG | 0.445826 | 3.3:-73416359 | None:intergenic |
TAACAACATCAGCATCGCTT+TGG | 0.454098 | 3.3:-73417309 | None:intergenic |
TCAACTCCCAACTTGGTTGA+AGG | 0.454765 | 3.3:+73416376 | MS.gene75421:CDS |
TAGCATATTACCTTTGCGTT+GGG | 0.461399 | 3.3:-73415856 | None:intergenic |
ATTATTATTCAGCATAATGA+TGG | 0.465228 | 3.3:+73416320 | MS.gene75421:CDS |
AACTTGATCAACTCCCAACT+TGG | 0.471967 | 3.3:+73416369 | MS.gene75421:CDS |
ATCAGCAGATTTAATTTCTG+TGG | 0.473164 | 3.3:-73415285 | None:intergenic |
TTTGAAAGATTCAGCACCTT+CGG | 0.475862 | 3.3:-73416079 | None:intergenic |
TGTATGCCTTCAACCAAGTT+GGG | 0.477288 | 3.3:-73416382 | None:intergenic |
CAACAATACCTTCAGCTTCA+CGG | 0.486922 | 3.3:-73415232 | None:intergenic |
CTCATCAGTGTCTGGGCCTG+TGG | 0.488157 | 3.3:+73415585 | MS.gene75421:CDS |
GGACATCAAAGGTGTCGGTT+GGG | 0.499082 | 3.3:-73417474 | None:intergenic |
ACAGCAACTTCATCCAAGAT+TGG | 0.500750 | 3.3:-73417280 | None:intergenic |
TCAACTTTAGCCAAAACAAC+TGG | 0.501606 | 3.3:-73415098 | None:intergenic |
GCATCGGAAAATGATGTTAA+GGG | 0.501951 | 3.3:+73415149 | MS.gene75421:CDS |
TTGTATGCCTTCAACCAAGT+TGG | 0.504888 | 3.3:-73416383 | None:intergenic |
AACTTGGTTGAAGGCATACA+AGG | 0.511536 | 3.3:+73416385 | MS.gene75421:CDS |
ACAACAAAAGGGTGATTGCT+AGG | 0.516435 | 3.3:-73415817 | None:intergenic |
TCCACAAAGAGCTCGTCAAA+TGG | 0.516958 | 3.3:-73415622 | None:intergenic |
AGCCTGTTAAAGTGGTGGTT+GGG | 0.520564 | 3.3:+73416632 | MS.gene75421:CDS |
ATAGGTTCAGACTTGACAAA+TGG | 0.520816 | 3.3:-73416592 | None:intergenic |
TTCATCAACTTTACTACCGA+AGG | 0.524434 | 3.3:+73416063 | MS.gene75421:CDS |
TAAGGAATTTGTTCTTACAT+TGG | 0.528164 | 3.3:+73414255 | MS.gene75421:CDS |
AGTACAAGGTTGGATAGCCT+TGG | 0.529316 | 3.3:-73417495 | None:intergenic |
TAAAGAATTTGACAACAAAA+GGG | 0.539434 | 3.3:-73415828 | None:intergenic |
ATTTAATTTCTGTGGATGCA+GGG | 0.540043 | 3.3:-73415277 | None:intergenic |
TGGACATCAAAGGTGTCGGT+TGG | 0.545584 | 3.3:-73417475 | None:intergenic |
ACTTGCTGACCTGAAGTACA+AGG | 0.546228 | 3.3:-73417509 | None:intergenic |
GAGCCTGTTAAAGTGGTGGT+TGG | 0.547102 | 3.3:+73416631 | MS.gene75421:CDS |
TAACAACGAGCCTGTTAAAG+TGG | 0.548405 | 3.3:+73416624 | MS.gene75421:CDS |
CGTGCTTCTTAACAGTGTCA+TGG | 0.554710 | 3.3:-73414291 | None:intergenic |
AATGCCAAACACCTTCCAAA+GGG | 0.555418 | 3.3:+73415559 | MS.gene75421:CDS |
ATAGCATATTACCTTTGCGT+TGG | 0.558347 | 3.3:-73415857 | None:intergenic |
GTGTGGTCACTGCAAGCAGT+TGG | 0.562081 | 3.3:+73417255 | MS.gene75421:CDS |
CGAGCTCTTTGTGGACTCAA+AGG | 0.563092 | 3.3:+73415630 | MS.gene75421:CDS |
AGGGAGACTCATCAGTGTCT+GGG | 0.565719 | 3.3:+73415578 | MS.gene75421:CDS |
GGCTAAAGTTGATGCCAATG+AGG | 0.571580 | 3.3:+73415109 | MS.gene75421:CDS |
CTTTAACTCTCCCAACGCAA+AGG | 0.574888 | 3.3:+73415846 | MS.gene75421:CDS |
TATCACAATACGACGGTGGT+AGG | 0.575370 | 3.3:+73417539 | MS.gene75421:CDS |
GGAATCATCAACTGACGCTA+AGG | 0.579077 | 3.3:+73414237 | MS.gene75421:CDS |
TGGATAGCCTTGGACATCAA+AGG | 0.580400 | 3.3:-73417485 | None:intergenic |
GGTGGTTGGGCAAACTCTTG+AGG | 0.585968 | 3.3:+73416645 | MS.gene75421:CDS |
GGCTTAAATAACCTAACCAC+AGG | 0.587681 | 3.3:-73415601 | None:intergenic |
TGATTTGATACAAACCTGGA+AGG | 0.592127 | 3.3:-73416184 | None:intergenic |
GAATGCCAAACACCTTCCAA+AGG | 0.593226 | 3.3:+73415558 | MS.gene75421:CDS |
GCCTTGGACATCAAAGGTGT+CGG | 0.594850 | 3.3:-73417479 | None:intergenic |
TCCTCAGCGAAGATCTGAGA+AGG | 0.597194 | 3.3:-73414217 | None:intergenic |
TTTGTTGTCACCAACAAAAG+CGG | 0.599155 | 3.3:-73415315 | None:intergenic |
TCGTTGAATTCTACGCACCT+TGG | 0.601145 | 3.3:+73414323 | MS.gene75421:CDS |
ACCGACACCTTTGATGTCCA+AGG | 0.610146 | 3.3:+73417478 | MS.gene75421:CDS |
AAAGGTCCCCGTGAAGCTGA+AGG | 0.611382 | 3.3:+73415224 | MS.gene75421:CDS |
CTGATGAGTCTCCCTTTGGA+AGG | 0.611823 | 3.3:-73415570 | None:intergenic |
GCTGACCTGAAGTACAAGGT+TGG | 0.622345 | 3.3:-73417505 | None:intergenic |
TCCTTCTCAGATCTTCGCTG+AGG | 0.624832 | 3.3:+73414216 | MS.gene75421:CDS |
TTGTACTTCAGGTCAGCAAG+TGG | 0.630258 | 3.3:+73417511 | MS.gene75421:CDS |
GAGTATTTGAAGAAACAAAG+TGG | 0.633884 | 3.3:+73415254 | MS.gene75421:CDS |
ACTTTAGCCAAAACAACTGG+TGG | 0.644441 | 3.3:-73415095 | None:intergenic |
CAACGAGCCTGTTAAAGTGG+TGG | 0.644690 | 3.3:+73416627 | MS.gene75421:CDS |
GTTGAAGACAGTCACAATTG+GGG | 0.650510 | 3.3:-73415788 | None:intergenic |
AAGAACATTCAAGAATACAA+AGG | 0.658966 | 3.3:+73415206 | MS.gene75421:CDS |
CTGTAAGAAGCTAGCCCCAG+AGG | 0.662437 | 3.3:+73414941 | MS.gene75421:CDS |
ATACGACGGTGGTAGGACAA+AGG | 0.665963 | 3.3:+73417546 | MS.gene75421:CDS |
AGAATTCATTGAAAAGAACA+AGG | 0.668104 | 3.3:+73417579 | MS.gene75421:CDS |
GGTGTCGGTTGGGATATCGT+TGG | 0.672392 | 3.3:-73417464 | None:intergenic |
GCACAACAAAGACCTCGCAT+CGG | 0.673668 | 3.3:+73415133 | MS.gene75421:CDS |
TTTACATCTGCAGTATGAGA+AGG | 0.680313 | 3.3:+73415046 | MS.gene75421:intron |
GGAGATGTTGAGTCTAGTCA+AGG | 0.683590 | 3.3:+73416159 | MS.gene75421:CDS |
TGCTTGCAGTGACCACACCA+AGG | 0.706154 | 3.3:-73417250 | None:intergenic |
ACAATACCTTCAGCTTCACG+GGG | 0.710567 | 3.3:-73415230 | None:intergenic |
AAACTATCACAATACGACGG+TGG | 0.747587 | 3.3:+73417535 | MS.gene75421:CDS |
GGAAAACTATCACAATACGA+CGG | 0.749076 | 3.3:+73417532 | MS.gene75421:CDS |
GCTGAGCAATACAAACAACA+GGG | 0.751097 | 3.3:+73416120 | MS.gene75421:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATCAAATTAACAATTATA+AGG | - | chr3.3:73414891-73414910 | None:intergenic | 10.0% |
!! | CTAAATTAAAGTTATAAAAT+TGG | + | chr3.3:73416028-73416047 | MS.gene75421:intron | 10.0% |
!! | TATCAAAAAATAAAAGAAAA+AGG | - | chr3.3:73417393-73417412 | None:intergenic | 10.0% |
!!! | ATAACTTTAATTTAGATTTA+CGG | - | chr3.3:73416023-73416042 | None:intergenic | 10.0% |
!!! | TTTTCTTTTATTTTTTGATA+TGG | + | chr3.3:73417393-73417412 | MS.gene75421:intron | 10.0% |
!! | AAAAACTAAAATATGTAACA+TGG | - | chr3.3:73415684-73415703 | None:intergenic | 15.0% |
!! | ATATCCTAATAGAAATAATA+AGG | - | chr3.3:73416465-73416484 | None:intergenic | 15.0% |
!! | TATCCTAATAGAAATAATAA+GGG | - | chr3.3:73416464-73416483 | None:intergenic | 15.0% |
!!! | AAAATTTTGCCTTTTATTTT+TGG | + | chr3.3:73416700-73416719 | MS.gene75421:intron | 15.0% |
!!! | ATTATTTCTATTAGGATATT+TGG | + | chr3.3:73416466-73416485 | MS.gene75421:intron | 15.0% |
!!! | ATTTATCATATTTTCTTTTC+AGG | + | chr3.3:73416555-73416574 | MS.gene75421:intron | 15.0% |
!!! | TAACTTTAATTTAGATTTAC+GGG | - | chr3.3:73416022-73416041 | None:intergenic | 15.0% |
!! | ATTAAAGTTATAAAATTGGC+AGG | + | chr3.3:73416032-73416051 | MS.gene75421:intron | 20.0% |
!! | ATTATTATTCAGCATAATGA+TGG | + | chr3.3:73416320-73416339 | MS.gene75421:CDS | 20.0% |
!! | CAATTGATCAAAATGAAAAT+TGG | - | chr3.3:73414842-73414861 | None:intergenic | 20.0% |
!! | GAAAAACAACATAAAAAAAC+AGG | - | chr3.3:73414363-73414382 | None:intergenic | 20.0% |
!! | GATAATGTTATAATCATCAA+AGG | - | chr3.3:73417371-73417390 | None:intergenic | 20.0% |
!! | GGTAATTATTATGCTAAATT+AGG | + | chr3.3:73414487-73414506 | MS.gene75421:intron | 20.0% |
!! | TAAAGAATTTGACAACAAAA+GGG | - | chr3.3:73415831-73415850 | None:intergenic | 20.0% |
!! | TAGAAAAAGCCAAAAATAAA+AGG | - | chr3.3:73416712-73416731 | None:intergenic | 20.0% |
!! | TATATAGCATAAATTACACA+TGG | + | chr3.3:73417056-73417075 | MS.gene75421:intron | 20.0% |
!! | TTAAAGAATTTGACAACAAA+AGG | - | chr3.3:73415832-73415851 | None:intergenic | 20.0% |
!! | TTAATATTTGACATTGTCAA+TGG | + | chr3.3:73416251-73416270 | MS.gene75421:intron | 20.0% |
!! | TTATGCTGAATAATAATTAG+AGG | - | chr3.3:73416317-73416336 | None:intergenic | 20.0% |
!!! | GTTTGTTAAATTTTCTGTAA+TGG | + | chr3.3:73414803-73414822 | MS.gene75421:intron | 20.0% |
!!! | TATTATCTTTCAATGTTTTC+AGG | + | chr3.3:73415441-73415460 | MS.gene75421:intron | 20.0% |
!!! | TTTATTTTTGGCTTTTTCTA+TGG | + | chr3.3:73416712-73416731 | MS.gene75421:intron | 20.0% |
! | AAAGAAAAATAATTCACCTC+TGG | - | chr3.3:73414960-73414979 | None:intergenic | 25.0% |
! | AAGAAAAATAATTCACCTCT+GGG | - | chr3.3:73414959-73414978 | None:intergenic | 25.0% |
! | AAGAACATTCAAGAATACAA+AGG | + | chr3.3:73415206-73415225 | MS.gene75421:CDS | 25.0% |
! | ACCATTCCTAAAAATCTTAA+TGG | - | chr3.3:73415183-73415202 | None:intergenic | 25.0% |
! | AGAATTCATTGAAAAGAACA+AGG | + | chr3.3:73417579-73417598 | MS.gene75421:CDS | 25.0% |
! | ATGCTATATACATAATCACA+AGG | - | chr3.3:73417046-73417065 | None:intergenic | 25.0% |
! | GAGTTACACTAATAATATAC+TGG | + | chr3.3:73417186-73417205 | MS.gene75421:intron | 25.0% |
! | TCCTAAAAATCTTAATGGTT+GGG | - | chr3.3:73415178-73415197 | None:intergenic | 25.0% |
! | TCGCATTATAAAAGATGTTA+CGG | - | chr3.3:73415399-73415418 | None:intergenic | 25.0% |
! | TTCCTAAAAATCTTAATGGT+TGG | - | chr3.3:73415179-73415198 | None:intergenic | 25.0% |
! | TTCTTGTCATATATGTTCTA+TGG | + | chr3.3:73416975-73416994 | MS.gene75421:intron | 25.0% |
!! | ATTCTAAGAGTAAACTACAA+TGG | - | chr3.3:73415362-73415381 | None:intergenic | 25.0% |
!! | TAAGGAATTTGTTCTTACAT+TGG | + | chr3.3:73414255-73414274 | MS.gene75421:CDS | 25.0% |
!!! | ACCATTAAGATTTTTAGGAA+TGG | + | chr3.3:73415179-73415198 | MS.gene75421:CDS | 25.0% |
!!! | ATCATATTTTCTTTTCAGGA+TGG | + | chr3.3:73416559-73416578 | MS.gene75421:intron | 25.0% |
!!! | ATGGATTATCAGATAGATTT+TGG | + | chr3.3:73416731-73416750 | MS.gene75421:intron | 25.0% |
!!! | ATTAAGATTTTTAGGAATGG+TGG | + | chr3.3:73415182-73415201 | MS.gene75421:CDS | 25.0% |
!!! | GTACCCTTATTATTTCTATT+AGG | + | chr3.3:73416458-73416477 | MS.gene75421:intron | 25.0% |
!!! | TTATTTTTTCCCATCTTTCT+AGG | + | chr3.3:73414910-73414929 | MS.gene75421:intron | 25.0% |
AAACATGATATTTCACATGC+AGG | - | chr3.3:73416805-73416824 | None:intergenic | 30.0% | |
AACATGATATTTCACATGCA+GGG | - | chr3.3:73416804-73416823 | None:intergenic | 30.0% | |
AGAAAAATAATTCACCTCTG+GGG | - | chr3.3:73414958-73414977 | None:intergenic | 30.0% | |
AGTGTAACTCTACATGAATA+AGG | - | chr3.3:73417176-73417195 | None:intergenic | 30.0% | |
AGTTGATCAAGTTCCAAATT+GGG | - | chr3.3:73416362-73416381 | None:intergenic | 30.0% | |
GAAAAGAACAAGGATAAAAC+TGG | + | chr3.3:73417589-73417608 | MS.gene75421:CDS | 30.0% | |
GAGTATTTGAAGAAACAAAG+TGG | + | chr3.3:73415254-73415273 | MS.gene75421:CDS | 30.0% | |
GCTTATTTCGTGTTAGAAAT+TGG | + | chr3.3:73414466-73414485 | MS.gene75421:intron | 30.0% | |
TAAAACTCTATCAAAACTGC+AGG | - | chr3.3:73417226-73417245 | None:intergenic | 30.0% | |
TAAAATTGTTTCATGCTCGT+AGG | + | chr3.3:73415720-73415739 | MS.gene75421:intron | 30.0% | |
TACCAACTTAAAGAAGTCAA+AGG | - | chr3.3:73416441-73416460 | None:intergenic | 30.0% | |
TGGTAATTACTGCAACATAA+TGG | - | chr3.3:73417104-73417123 | None:intergenic | 30.0% | |
! | ATCAGCAGATTTAATTTCTG+TGG | - | chr3.3:73415288-73415307 | None:intergenic | 30.0% |
! | ATTGTTTTCTCTTCTTCTGT+TGG | + | chr3.3:73414192-73414211 | MS.gene75421:CDS | 30.0% |
! | ATTTAATTTCTGTGGATGCA+GGG | - | chr3.3:73415280-73415299 | None:intergenic | 30.0% |
! | TCCCAACCATTAAGATTTTT+AGG | + | chr3.3:73415174-73415193 | MS.gene75421:CDS | 30.0% |
! | TGATGTTGTTATTGCAAAAC+TGG | + | chr3.3:73417321-73417340 | MS.gene75421:CDS | 30.0% |
!! | ACTTTGATTTGATACAAACC+TGG | - | chr3.3:73416191-73416210 | None:intergenic | 30.0% |
!! | GAAGTTTTTCAAACCCAATT+TGG | + | chr3.3:73416346-73416365 | MS.gene75421:CDS | 30.0% |
!!! | ATCTTTCAATGTTTTCAGGT+CGG | + | chr3.3:73415445-73415464 | MS.gene75421:intron | 30.0% |
AATTTAGATTTACGGGACAC+AGG | - | chr3.3:73416015-73416034 | None:intergenic | 35.0% | |
ACTCCTCACCAGAAAATTTA+GGG | - | chr3.3:73415477-73415496 | None:intergenic | 35.0% | |
AGGTATTAGCTCATTTCTCT+TGG | + | chr3.3:73416405-73416424 | MS.gene75421:intron | 35.0% | |
ATAGCATATTACCTTTGCGT+TGG | - | chr3.3:73415860-73415879 | None:intergenic | 35.0% | |
ATAGGTTCAGACTTGACAAA+TGG | - | chr3.3:73416595-73416614 | None:intergenic | 35.0% | |
CTTCAAAGAAACATGTTTCC+TGG | - | chr3.3:73417008-73417027 | None:intergenic | 35.0% | |
GACACAAAATGGTAAGCTAA+AGG | - | chr3.3:73415946-73415965 | None:intergenic | 35.0% | |
GCATCGGAAAATGATGTTAA+GGG | + | chr3.3:73415149-73415168 | MS.gene75421:CDS | 35.0% | |
GGAAAACTATCACAATACGA+CGG | + | chr3.3:73417532-73417551 | MS.gene75421:CDS | 35.0% | |
TAAGAGTAAACTACAATGGC+TGG | - | chr3.3:73415358-73415377 | None:intergenic | 35.0% | |
TACTCCTCACCAGAAAATTT+AGG | - | chr3.3:73415478-73415497 | None:intergenic | 35.0% | |
TAGCATATTACCTTTGCGTT+GGG | - | chr3.3:73415859-73415878 | None:intergenic | 35.0% | |
TCAACTTTAGCCAAAACAAC+TGG | - | chr3.3:73415101-73415120 | None:intergenic | 35.0% | |
TGATTTGATACAAACCTGGA+AGG | - | chr3.3:73416187-73416206 | None:intergenic | 35.0% | |
TGTTGAAGACAGTCACAATT+GGG | - | chr3.3:73415792-73415811 | None:intergenic | 35.0% | |
TTCATCAACTTTACTACCGA+AGG | + | chr3.3:73416063-73416082 | MS.gene75421:CDS | 35.0% | |
TTGTTGAAGACAGTCACAAT+TGG | - | chr3.3:73415793-73415812 | None:intergenic | 35.0% | |
TTTACATCTGCAGTATGAGA+AGG | + | chr3.3:73415046-73415065 | MS.gene75421:intron | 35.0% | |
TTTGAAAGATTCAGCACCTT+CGG | - | chr3.3:73416082-73416101 | None:intergenic | 35.0% | |
! | ACATTGTCAATGGCTTTTCT+TGG | + | chr3.3:73416261-73416280 | MS.gene75421:intron | 35.0% |
! | GAGTTGATCAAGTTCCAAAT+TGG | - | chr3.3:73416363-73416382 | None:intergenic | 35.0% |
! | GATTTAATTTCTGTGGATGC+AGG | - | chr3.3:73415281-73415300 | None:intergenic | 35.0% |
! | GGAGTTTTCCCTAAATTTTC+TGG | + | chr3.3:73415466-73415485 | MS.gene75421:CDS | 35.0% |
! | TCGTTGTTAGTTTCAGGAAT+AGG | - | chr3.3:73416613-73416632 | None:intergenic | 35.0% |
! | TGCCTTTGACTTCTTTAAGT+TGG | + | chr3.3:73416436-73416455 | MS.gene75421:intron | 35.0% |
! | TTTGTTGTCACCAACAAAAG+CGG | - | chr3.3:73415318-73415337 | None:intergenic | 35.0% |
!! | ATTTTCTTTTCAGGATGGCA+AGG | + | chr3.3:73416564-73416583 | MS.gene75421:intron | 35.0% |
!! | TGATAGAGTTTTATGCTCCT+TGG | + | chr3.3:73417233-73417252 | MS.gene75421:CDS | 35.0% |
!! | TTTCCCTAAATTTTCTGGTG+AGG | + | chr3.3:73415471-73415490 | MS.gene75421:CDS | 35.0% |
AAACAGAGACAAAGGAAGCA+AGG | - | chr3.3:73415978-73415997 | None:intergenic | 40.0% | |
AAACTATCACAATACGACGG+TGG | + | chr3.3:73417535-73417554 | MS.gene75421:CDS | 40.0% | |
AACAATACCTTCAGCTTCAC+GGG | - | chr3.3:73415234-73415253 | None:intergenic | 40.0% | |
AACTTGATCAACTCCCAACT+TGG | + | chr3.3:73416369-73416388 | MS.gene75421:CDS | 40.0% | |
AATGCCAAACACCTTCCAAA+GGG | + | chr3.3:73415559-73415578 | MS.gene75421:CDS | 40.0% | |
ACAACAAAAGGGTGATTGCT+AGG | - | chr3.3:73415820-73415839 | None:intergenic | 40.0% | |
ACAGCAACTTCATCCAAGAT+TGG | - | chr3.3:73417283-73417302 | None:intergenic | 40.0% | |
ACTTTAGCCAAAACAACTGG+TGG | - | chr3.3:73415098-73415117 | None:intergenic | 40.0% | |
AGGAGAAACAAACCATACCA+AGG | - | chr3.3:73414343-73414362 | None:intergenic | 40.0% | |
ATGTTCTATGGAAGTTCTCC+AGG | + | chr3.3:73416987-73417006 | MS.gene75421:intron | 40.0% | |
CAACAATACCTTCAGCTTCA+CGG | - | chr3.3:73415235-73415254 | None:intergenic | 40.0% | |
CGCATCGGAAAATGATGTTA+AGG | + | chr3.3:73415148-73415167 | MS.gene75421:CDS | 40.0% | |
GAGAGACAGTGATTTCTGTA+TGG | - | chr3.3:73417124-73417143 | None:intergenic | 40.0% | |
GCTGAGCAATACAAACAACA+GGG | + | chr3.3:73416120-73416139 | MS.gene75421:CDS | 40.0% | |
GGCTTAAATAACCTAACCAC+AGG | - | chr3.3:73415604-73415623 | None:intergenic | 40.0% | |
GTTGAAGACAGTCACAATTG+GGG | - | chr3.3:73415791-73415810 | None:intergenic | 40.0% | |
TAACAACATCAGCATCGCTT+TGG | - | chr3.3:73417312-73417331 | None:intergenic | 40.0% | |
TAACAACGAGCCTGTTAAAG+TGG | + | chr3.3:73416624-73416643 | MS.gene75421:CDS | 40.0% | |
TACGGGACACAGGATAATAT+GGG | - | chr3.3:73416005-73416024 | None:intergenic | 40.0% | |
TCCAAACTCTTTCACATGCA+GGG | - | chr3.3:73416843-73416862 | None:intergenic | 40.0% | |
TGCTGAGCAATACAAACAAC+AGG | + | chr3.3:73416119-73416138 | MS.gene75421:CDS | 40.0% | |
TGGGTGTAAAACAGAGACAA+AGG | - | chr3.3:73415986-73416005 | None:intergenic | 40.0% | |
TGTATGCCTTCAACCAAGTT+GGG | - | chr3.3:73416385-73416404 | None:intergenic | 40.0% | |
TGTATTGCTCAGCAACTTCA+TGG | - | chr3.3:73416113-73416132 | None:intergenic | 40.0% | |
TTACGGGACACAGGATAATA+TGG | - | chr3.3:73416006-73416025 | None:intergenic | 40.0% | |
TTGTATGCCTTCAACCAAGT+TGG | - | chr3.3:73416386-73416405 | None:intergenic | 40.0% | |
! | AACTTGGTTGAAGGCATACA+AGG | + | chr3.3:73416385-73416404 | MS.gene75421:CDS | 40.0% |
! | CACGCATCGATAATAATTCG+AGG | - | chr3.3:73414686-73414705 | None:intergenic | 40.0% |
! | GCGAAAAACGTTGCGATTTT+CGG | + | chr3.3:73414166-73414185 | MS.gene75421:CDS | 40.0% |
! | GGCTTTTCTTGGCAGTATTT+TGG | + | chr3.3:73416272-73416291 | MS.gene75421:intron | 40.0% |
! | TAACATCATTTTCCGATGCG+AGG | - | chr3.3:73415148-73415167 | None:intergenic | 40.0% |
! | TTTTCCCATCTTTCTAGGTG+TGG | + | chr3.3:73414915-73414934 | MS.gene75421:intron | 40.0% |
!! | CATCATTTGTGTCACTTTCC+AGG | + | chr3.3:73417432-73417451 | MS.gene75421:intron | 40.0% |
!! | GGTTGCTTTGAGACACAAAA+TGG | - | chr3.3:73415957-73415976 | None:intergenic | 40.0% |
!! | TCTTTTGGTTGTTCTGCTTC+TGG | - | chr3.3:73417658-73417677 | None:intergenic | 40.0% |
!! | TTGGCAGTATTTTGGACTGA+AGG | + | chr3.3:73416280-73416299 | MS.gene75421:intron | 40.0% |
!!! | AGGACGTTGTTTTCAAGTCT+GGG | + | chr3.3:73416665-73416684 | MS.gene75421:CDS | 40.0% |
!!! | GTTTTCAAGTCTGGGAAGAA+TGG | + | chr3.3:73416673-73416692 | MS.gene75421:CDS | 40.0% |
ACAATACCTTCAGCTTCACG+GGG | - | chr3.3:73415233-73415252 | None:intergenic | 45.0% | |
AGCCTGTTAAAGTGGTGGTT+GGG | + | chr3.3:73416632-73416651 | MS.gene75421:CDS | 45.0% | |
AGTACAAGGTTGGATAGCCT+TGG | - | chr3.3:73417498-73417517 | None:intergenic | 45.0% | |
AGTGTCCACACCTAGAAAGA+TGG | - | chr3.3:73414923-73414942 | None:intergenic | 45.0% | |
CGTGCTTCTTAACAGTGTCA+TGG | - | chr3.3:73414294-73414313 | None:intergenic | 45.0% | |
CTTTAACTCTCCCAACGCAA+AGG | + | chr3.3:73415846-73415865 | MS.gene75421:CDS | 45.0% | |
GAATGCCAAACACCTTCCAA+AGG | + | chr3.3:73415558-73415577 | MS.gene75421:CDS | 45.0% | |
GAATTCTACGCACCTTGGTA+TGG | + | chr3.3:73414328-73414347 | MS.gene75421:intron | 45.0% | |
GCTATCCAACCTTGTACTTC+AGG | + | chr3.3:73417500-73417519 | MS.gene75421:CDS | 45.0% | |
GGAATCATCAACTGACGCTA+AGG | + | chr3.3:73414237-73414256 | MS.gene75421:CDS | 45.0% | |
GGAGATGTTGAGTCTAGTCA+AGG | + | chr3.3:73416159-73416178 | MS.gene75421:CDS | 45.0% | |
GTCCAAACTCTTTCACATGC+AGG | - | chr3.3:73416844-73416863 | None:intergenic | 45.0% | |
GTGTCCACACCTAGAAAGAT+GGG | - | chr3.3:73414922-73414941 | None:intergenic | 45.0% | |
TATCACAATACGACGGTGGT+AGG | + | chr3.3:73417539-73417558 | MS.gene75421:CDS | 45.0% | |
TCAACTCCCAACTTGGTTGA+AGG | + | chr3.3:73416376-73416395 | MS.gene75421:CDS | 45.0% | |
TCCACAAAGAGCTCGTCAAA+TGG | - | chr3.3:73415625-73415644 | None:intergenic | 45.0% | |
TCCCTGCATGTGAAAGAGTT+TGG | + | chr3.3:73416839-73416858 | MS.gene75421:intron | 45.0% | |
TCGTTGAATTCTACGCACCT+TGG | + | chr3.3:73414323-73414342 | MS.gene75421:CDS | 45.0% | |
TTAGTCATGTCAGCGTGTGT+CGG | - | chr3.3:73414633-73414652 | None:intergenic | 45.0% | |
TTGTACTTCAGGTCAGCAAG+TGG | + | chr3.3:73417511-73417530 | MS.gene75421:CDS | 45.0% | |
! | ACAGGCTCGTTGTTAGTTTC+AGG | - | chr3.3:73416619-73416638 | None:intergenic | 45.0% |
! | ACTTGCTGACCTGAAGTACA+AGG | - | chr3.3:73417512-73417531 | None:intergenic | 45.0% |
! | GTCTTTGTTGTGCTCCTCAT+TGG | - | chr3.3:73415126-73415145 | None:intergenic | 45.0% |
! | TGGATAGCCTTGGACATCAA+AGG | - | chr3.3:73417488-73417507 | None:intergenic | 45.0% |
!! | CAGGGAGTTAGCTTTCTTGT+TGG | + | chr3.3:73416138-73416157 | MS.gene75421:CDS | 45.0% |
!! | GAGTTTTATGCTCCTTGGTG+TGG | + | chr3.3:73417238-73417257 | MS.gene75421:CDS | 45.0% |
!! | GGCTAAAGTTGATGCCAATG+AGG | + | chr3.3:73415109-73415128 | MS.gene75421:CDS | 45.0% |
!!! | GAGGACGTTGTTTTCAAGTC+TGG | + | chr3.3:73416664-73416683 | MS.gene75421:CDS | 45.0% |
!!! | TTATTTTCTTTAATTATTTT+GGG | + | chr3.3:73414978-73414997 | MS.gene75421:intron | 5.0% |
!!! | TTTATTTTCTTTAATTATTT+TGG | + | chr3.3:73414977-73414996 | MS.gene75421:intron | 5.0% |
AAGGGAGACTCATCAGTGTC+TGG | + | chr3.3:73415577-73415596 | MS.gene75421:CDS | 50.0% | |
ACCGACACCTTTGATGTCCA+AGG | + | chr3.3:73417478-73417497 | MS.gene75421:CDS | 50.0% | |
AGGGAGACTCATCAGTGTCT+GGG | + | chr3.3:73415578-73415597 | MS.gene75421:CDS | 50.0% | |
ATACGACGGTGGTAGGACAA+AGG | + | chr3.3:73417546-73417565 | MS.gene75421:CDS | 50.0% | |
CAACGAGCCTGTTAAAGTGG+TGG | + | chr3.3:73416627-73416646 | MS.gene75421:CDS | 50.0% | |
CGAGCTCTTTGTGGACTCAA+AGG | + | chr3.3:73415630-73415649 | MS.gene75421:CDS | 50.0% | |
CTGATGAGTCTCCCTTTGGA+AGG | - | chr3.3:73415573-73415592 | None:intergenic | 50.0% | |
GACACTGATGAGTCTCCCTT+TGG | - | chr3.3:73415577-73415596 | None:intergenic | 50.0% | |
GACAGTCACAATTGGGGTAC+TGG | - | chr3.3:73415785-73415804 | None:intergenic | 50.0% | |
GAGCCTGTTAAAGTGGTGGT+TGG | + | chr3.3:73416631-73416650 | MS.gene75421:CDS | 50.0% | |
GCACAACAAAGACCTCGCAT+CGG | + | chr3.3:73415133-73415152 | MS.gene75421:CDS | 50.0% | |
GCCATTTGACGAGCTCTTTG+TGG | + | chr3.3:73415621-73415640 | MS.gene75421:CDS | 50.0% | |
GCTGACCTGAAGTACAAGGT+TGG | - | chr3.3:73417508-73417527 | None:intergenic | 50.0% | |
TATCGTTGGCAGTTGCATCC+TGG | - | chr3.3:73417453-73417472 | None:intergenic | 50.0% | |
TCCTCAGCGAAGATCTGAGA+AGG | - | chr3.3:73414220-73414239 | None:intergenic | 50.0% | |
TCCTTCTCAGATCTTCGCTG+AGG | + | chr3.3:73414216-73414235 | MS.gene75421:CDS | 50.0% | |
TGCCCAACCACCACTTTAAC+AGG | - | chr3.3:73416637-73416656 | None:intergenic | 50.0% | |
! | CAAGCAGTTGGCTCCAATCT+TGG | + | chr3.3:73417267-73417286 | MS.gene75421:CDS | 50.0% |
! | GCCTTGGACATCAAAGGTGT+CGG | - | chr3.3:73417482-73417501 | None:intergenic | 50.0% |
! | TCACGAGCCACCAGTTGTTT+TGG | + | chr3.3:73415088-73415107 | MS.gene75421:CDS | 50.0% |
!! | GATGATGCGACCGCTTTTGT+TGG | + | chr3.3:73415305-73415324 | MS.gene75421:CDS | 50.0% |
!! | GGACATCAAAGGTGTCGGTT+GGG | - | chr3.3:73417477-73417496 | None:intergenic | 50.0% |
!! | GTCTCCCTTTGGAAGGTGTT+TGG | - | chr3.3:73415566-73415585 | None:intergenic | 50.0% |
!! | TGGACATCAAAGGTGTCGGT+TGG | - | chr3.3:73417478-73417497 | None:intergenic | 50.0% |
AAAGGTCCCCGTGAAGCTGA+AGG | + | chr3.3:73415224-73415243 | MS.gene75421:CDS | 55.0% | |
ATCGATGTCGTGTCCGTGTC+CGG | + | chr3.3:73414595-73414614 | MS.gene75421:intron | 55.0% | |
CTGTAAGAAGCTAGCCCCAG+AGG | + | chr3.3:73414941-73414960 | MS.gene75421:CDS | 55.0% | |
GACACTGACAACACCGGACA+CGG | - | chr3.3:73414611-73414630 | None:intergenic | 55.0% | |
GGTGGTTGGGCAAACTCTTG+AGG | + | chr3.3:73416645-73416664 | MS.gene75421:CDS | 55.0% | |
GTGTCGGACACTGACAACAC+CGG | - | chr3.3:73414617-73414636 | None:intergenic | 55.0% | |
GTGTGGTCACTGCAAGCAGT+TGG | + | chr3.3:73417255-73417274 | MS.gene75421:CDS | 55.0% | |
TGCTTGCAGTGACCACACCA+AGG | - | chr3.3:73417253-73417272 | None:intergenic | 55.0% | |
! | GTCTAGTCAAGGTGCCTTCC+AGG | + | chr3.3:73416170-73416189 | MS.gene75421:CDS | 55.0% |
! | TCTGGCTGAGCAGCAGCTTT+TGG | - | chr3.3:73417640-73417659 | None:intergenic | 55.0% |
!! | GGTGTCGGTTGGGATATCGT+TGG | - | chr3.3:73417467-73417486 | None:intergenic | 55.0% |
CAGTGTCTGGGCCTGTGGTT+AGG | + | chr3.3:73415590-73415609 | MS.gene75421:CDS | 60.0% | |
CTCATCAGTGTCTGGGCCTG+TGG | + | chr3.3:73415585-73415604 | MS.gene75421:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 73414163 | 73417687 | 73414163 | ID=MS.gene75421 |
chr3.3 | mRNA | 73414163 | 73417687 | 73414163 | ID=MS.gene75421.t1;Parent=MS.gene75421 |
chr3.3 | exon | 73414163 | 73414344 | 73414163 | ID=MS.gene75421.t1.exon1;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73414163 | 73414344 | 73414163 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73414932 | 73414962 | 73414932 | ID=MS.gene75421.t1.exon2;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73414932 | 73414962 | 73414932 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73415059 | 73415346 | 73415059 | ID=MS.gene75421.t1.exon3;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73415059 | 73415346 | 73415059 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73415463 | 73415651 | 73415463 | ID=MS.gene75421.t1.exon4;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73415463 | 73415651 | 73415463 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73415742 | 73415867 | 73415742 | ID=MS.gene75421.t1.exon5;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73415742 | 73415867 | 73415742 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73416054 | 73416191 | 73416054 | ID=MS.gene75421.t1.exon6;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73416054 | 73416191 | 73416054 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73416287 | 73416406 | 73416287 | ID=MS.gene75421.t1.exon7;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73416287 | 73416406 | 73416287 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73416577 | 73416694 | 73416577 | ID=MS.gene75421.t1.exon8;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73416577 | 73416694 | 73416577 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73417230 | 73417342 | 73417230 | ID=MS.gene75421.t1.exon9;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73417230 | 73417342 | 73417230 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
chr3.3 | exon | 73417454 | 73417687 | 73417454 | ID=MS.gene75421.t1.exon10;Parent=MS.gene75421.t1 |
chr3.3 | CDS | 73417454 | 73417687 | 73417454 | ID=cds.MS.gene75421.t1;Parent=MS.gene75421.t1 |
Gene Sequence |
Protein sequence |