Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28396.t1 | XP_003630256.2 | 97.9 | 428 | 9 | 0 | 1 | 428 | 1 | 428 | 9.00E-221 | 776.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28396.t1 | Q6ZD63 | 58.5 | 395 | 160 | 3 | 1 | 393 | 1 | 393 | 3.7e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28396.t1 | G7LE10 | 97.9 | 428 | 9 | 0 | 1 | 428 | 1 | 428 | 6.5e-221 | 776.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051955 | MS.gene28396 | 0.817187 | 3.76E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene28396 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene055957 | MS.gene28396 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene056041 | MS.gene28396 | 0.833176 | 6.20E-56 | -1.69E-46 |
| MS.gene056526 | MS.gene28396 | 0.830201 | 3.35E-55 | -1.69E-46 |
| MS.gene060473 | MS.gene28396 | 0.842491 | 2.50E-58 | -1.69E-46 |
| MS.gene060565 | MS.gene28396 | 0.844508 | 7.24E-59 | -1.69E-46 |
| MS.gene061260 | MS.gene28396 | 0.820321 | 7.30E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045060 | MS.gene28396 | PPI |
| MS.gene28396 | MS.gene58411 | PPI |
| MS.gene28396 | MS.gene005659 | PPI |
| MS.gene28396 | MS.gene89324 | PPI |
| MS.gene28396 | MS.gene06293 | PPI |
| MS.gene28396 | MS.gene049178 | PPI |
| MS.gene28396 | MS.gene055205 | PPI |
| MS.gene28396 | MS.gene033106 | PPI |
| MS.gene28396 | MS.gene026073 | PPI |
| MS.gene28396 | MS.gene000411 | PPI |
| MS.gene28396 | MS.gene46108 | PPI |
| MS.gene28396 | MS.gene41630 | PPI |
| MS.gene28396 | MS.gene91577 | PPI |
| MS.gene28396 | MS.gene49762 | PPI |
| MS.gene061737 | MS.gene28396 | PPI |
| MS.gene28396 | MS.gene75421 | PPI |
| MS.gene28396 | MS.gene21545 | PPI |
| MS.gene28396 | MS.gene025100 | PPI |
| MS.gene28396 | MS.gene89800 | PPI |
| MS.gene013209 | MS.gene28396 | PPI |
| MS.gene28396 | MS.gene85391 | PPI |
| MS.gene28396 | MS.gene044401 | PPI |
| MS.gene28396 | MS.gene21962 | PPI |
| MS.gene030522 | MS.gene28396 | PPI |
| MS.gene28396 | MS.gene70123 | PPI |
| MS.gene02998 | MS.gene28396 | PPI |
| MS.gene28396 | MS.gene07153 | PPI |
| MS.gene013810 | MS.gene28396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28396.t1 | MTR_8g093540 | 96.162 | 469 | 18 | 0 | 1 | 469 | 1 | 469 | 0.0 | 921 |
| MS.gene28396.t1 | MTR_2g086140 | 28.426 | 394 | 220 | 10 | 11 | 374 | 11 | 372 | 1.18e-38 | 150 |
| MS.gene28396.t1 | MTR_4g053675 | 26.730 | 419 | 229 | 11 | 11 | 389 | 11 | 391 | 1.81e-35 | 140 |
| MS.gene28396.t1 | MTR_1g072140 | 32.500 | 200 | 113 | 4 | 59 | 244 | 22 | 213 | 4.42e-17 | 82.4 |
| MS.gene28396.t1 | MTR_1g072140 | 29.688 | 128 | 84 | 1 | 54 | 181 | 59 | 180 | 1.60e-11 | 65.9 |
| MS.gene28396.t1 | MTR_1g072140 | 26.794 | 209 | 102 | 5 | 16 | 182 | 114 | 313 | 3.23e-11 | 64.7 |
| MS.gene28396.t1 | MTR_6g004040 | 27.848 | 158 | 97 | 3 | 25 | 181 | 29 | 170 | 6.92e-14 | 74.7 |
| MS.gene28396.t1 | MTR_6g004040 | 25.610 | 164 | 107 | 2 | 18 | 181 | 64 | 212 | 2.37e-11 | 66.6 |
| MS.gene28396.t1 | MTR_7g086360 | 29.496 | 139 | 92 | 2 | 44 | 181 | 35 | 168 | 1.53e-13 | 72.0 |
| MS.gene28396.t1 | MTR_4g119620 | 28.019 | 207 | 130 | 5 | 55 | 244 | 18 | 222 | 1.87e-13 | 71.6 |
| MS.gene28396.t1 | MTR_5g022690 | 29.762 | 168 | 102 | 4 | 21 | 187 | 287 | 439 | 7.89e-13 | 70.9 |
| MS.gene28396.t1 | MTR_3g045130 | 27.381 | 168 | 106 | 3 | 21 | 187 | 364 | 516 | 4.26e-12 | 68.6 |
| MS.gene28396.t1 | MTR_3g106080 | 26.036 | 169 | 110 | 3 | 13 | 181 | 419 | 572 | 1.79e-11 | 67.0 |
| MS.gene28396.t1 | MTR_1g054300 | 30.645 | 124 | 80 | 1 | 60 | 183 | 366 | 483 | 2.20e-11 | 66.2 |
| MS.gene28396.t1 | MTR_3g449990 | 28.571 | 224 | 138 | 9 | 34 | 244 | 242 | 456 | 2.22e-11 | 66.6 |
| MS.gene28396.t1 | MTR_4g095058 | 28.947 | 190 | 109 | 6 | 7 | 187 | 365 | 537 | 2.47e-11 | 66.2 |
| MS.gene28396.t1 | MTR_4g095058 | 28.947 | 190 | 109 | 6 | 7 | 187 | 367 | 539 | 2.50e-11 | 66.2 |
| MS.gene28396.t1 | MTR_8g038550 | 28.415 | 183 | 113 | 6 | 16 | 195 | 312 | 479 | 3.32e-11 | 66.2 |
| MS.gene28396.t1 | MTR_2g012630 | 25.806 | 155 | 98 | 3 | 28 | 181 | 31 | 169 | 3.56e-11 | 66.2 |
| MS.gene28396.t1 | MTR_2g012630 | 26.897 | 145 | 91 | 2 | 37 | 181 | 82 | 211 | 9.58e-11 | 64.7 |
| MS.gene28396.t1 | MTR_2g012630 | 25.806 | 155 | 98 | 3 | 28 | 181 | 31 | 169 | 3.77e-11 | 66.2 |
| MS.gene28396.t1 | MTR_2g012630 | 26.897 | 145 | 91 | 2 | 37 | 181 | 82 | 211 | 7.82e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28396.t1 | AT5G64630 | 69.634 | 382 | 114 | 2 | 1 | 380 | 1 | 382 | 0.0 | 577 |
| MS.gene28396.t1 | AT5G64630 | 69.634 | 382 | 114 | 2 | 1 | 380 | 1 | 382 | 0.0 | 571 |
| MS.gene28396.t1 | AT5G64630 | 70.915 | 306 | 87 | 2 | 77 | 380 | 18 | 323 | 8.02e-164 | 470 |
| MS.gene28396.t1 | AT3G44530 | 27.411 | 394 | 222 | 11 | 11 | 374 | 11 | 370 | 1.48e-34 | 138 |
| MS.gene28396.t1 | AT3G44530 | 27.411 | 394 | 222 | 11 | 11 | 374 | 11 | 370 | 1.51e-34 | 138 |
| MS.gene28396.t1 | AT1G11160 | 29.412 | 170 | 103 | 4 | 13 | 181 | 16 | 169 | 2.18e-14 | 76.6 |
| MS.gene28396.t1 | AT1G11160 | 29.412 | 170 | 103 | 4 | 13 | 181 | 58 | 211 | 2.80e-14 | 76.3 |
| MS.gene28396.t1 | AT5G67320 | 23.464 | 358 | 198 | 12 | 16 | 360 | 268 | 562 | 2.90e-14 | 75.9 |
| MS.gene28396.t1 | AT2G43770 | 30.935 | 139 | 90 | 2 | 44 | 181 | 33 | 166 | 2.99e-14 | 74.3 |
| MS.gene28396.t1 | AT1G11160 | 29.412 | 170 | 103 | 4 | 13 | 181 | 58 | 211 | 3.01e-14 | 75.9 |
| MS.gene28396.t1 | AT1G11160 | 29.412 | 170 | 103 | 4 | 13 | 181 | 58 | 211 | 3.04e-14 | 75.9 |
| MS.gene28396.t1 | AT3G49660 | 29.756 | 205 | 125 | 6 | 56 | 244 | 14 | 215 | 2.78e-13 | 71.2 |
| MS.gene28396.t1 | AT3G49660 | 29.143 | 175 | 107 | 3 | 13 | 184 | 155 | 315 | 2.24e-11 | 65.5 |
| MS.gene28396.t1 | AT1G61210 | 29.677 | 155 | 93 | 3 | 28 | 181 | 72 | 211 | 3.49e-13 | 72.8 |
| MS.gene28396.t1 | AT1G61210 | 25.490 | 153 | 97 | 3 | 30 | 181 | 33 | 169 | 7.19e-11 | 65.5 |
| MS.gene28396.t1 | AT1G61210 | 29.677 | 155 | 93 | 3 | 28 | 181 | 72 | 211 | 3.99e-13 | 72.4 |
| MS.gene28396.t1 | AT1G61210 | 25.490 | 153 | 97 | 3 | 30 | 181 | 33 | 169 | 7.56e-11 | 65.5 |
| MS.gene28396.t1 | AT1G61210 | 29.677 | 155 | 93 | 3 | 28 | 181 | 72 | 211 | 4.20e-13 | 72.4 |
| MS.gene28396.t1 | AT1G61210 | 25.490 | 153 | 97 | 3 | 30 | 181 | 33 | 169 | 7.97e-11 | 65.1 |
| MS.gene28396.t1 | AT5G08390 | 27.215 | 158 | 98 | 3 | 25 | 181 | 29 | 170 | 4.16e-12 | 69.3 |
| MS.gene28396.t1 | AT5G23430 | 25.949 | 158 | 100 | 3 | 25 | 181 | 29 | 170 | 6.48e-12 | 68.6 |
| MS.gene28396.t1 | AT5G23430 | 25.949 | 158 | 100 | 3 | 25 | 181 | 29 | 170 | 6.65e-12 | 68.6 |
| MS.gene28396.t1 | AT5G23430 | 25.949 | 158 | 100 | 3 | 25 | 181 | 29 | 170 | 6.65e-12 | 68.6 |
| MS.gene28396.t1 | AT3G21540 | 28.313 | 166 | 104 | 4 | 25 | 190 | 76 | 226 | 8.80e-12 | 68.2 |
| MS.gene28396.t1 | AT1G73720 | 29.878 | 164 | 108 | 2 | 21 | 184 | 221 | 377 | 1.38e-11 | 67.0 |
| MS.gene28396.t1 | AT5G52820 | 29.221 | 154 | 95 | 2 | 28 | 181 | 332 | 471 | 1.40e-11 | 67.0 |
| MS.gene28396.t1 | AT4G02730 | 29.139 | 151 | 97 | 3 | 41 | 187 | 17 | 161 | 3.39e-11 | 65.1 |
| MS.gene28396.t1 | AT5G13480 | 27.976 | 168 | 104 | 5 | 16 | 181 | 263 | 415 | 3.97e-11 | 65.9 |
| MS.gene28396.t1 | AT5G13480 | 27.976 | 168 | 104 | 5 | 16 | 181 | 240 | 392 | 4.01e-11 | 65.9 |
| MS.gene28396.t1 | AT5G13480 | 27.976 | 168 | 104 | 5 | 16 | 181 | 240 | 392 | 4.14e-11 | 65.9 |
| MS.gene28396.t1 | AT5G13480 | 27.976 | 168 | 104 | 5 | 16 | 181 | 252 | 404 | 5.16e-11 | 65.5 |
| MS.gene28396.t1 | AT5G25150 | 27.811 | 169 | 107 | 3 | 13 | 181 | 418 | 571 | 6.88e-11 | 65.1 |
| MS.gene28396.t1 | AT5G25150 | 27.811 | 169 | 107 | 3 | 13 | 181 | 418 | 571 | 6.96e-11 | 65.1 |
Find 123 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAACACCCTTTGATTTA+TGG | 0.105744 | 4.4:+9130480 | None:intergenic |
| TTGATAATTCTTGCATTATA+TGG | 0.142799 | 4.4:-9130748 | MS.gene28396:CDS |
| CTCAACACCCTTTGATTTAT+GGG | 0.254796 | 4.4:+9130481 | None:intergenic |
| GCAAGATGGTTTCTGCTCTT+TGG | 0.262968 | 4.4:-9127955 | MS.gene28396:CDS |
| ACCTTGGAATTCTTTAATAA+TGG | 0.273035 | 4.4:+9130413 | None:intergenic |
| AAGCTTAAGGGACCAAATTC+AGG | 0.275040 | 4.4:-9129236 | MS.gene28396:intron |
| GTGGAACGGTTCAGATTAAT+TGG | 0.283065 | 4.4:-9132127 | MS.gene28396:CDS |
| GGGTAGCCTGGGACCCTTTA+GGG | 0.287919 | 4.4:-9130559 | MS.gene28396:CDS |
| ATCTCATGTCAAGGACATTA+TGG | 0.295539 | 4.4:-9130816 | MS.gene28396:CDS |
| CCTGTATTATTTAAGCTTAA+GGG | 0.297907 | 4.4:-9129248 | MS.gene28396:CDS |
| TTGCAAGCATGTTATTTCTA+AGG | 0.302678 | 4.4:-9130444 | MS.gene28396:CDS |
| TCCTGTATTATTTAAGCTTA+AGG | 0.303126 | 4.4:-9129249 | MS.gene28396:CDS |
| TTATGGTCAGTTAAACCTTC+TGG | 0.304531 | 4.4:-9131912 | MS.gene28396:CDS |
| ATAGAAGCATCTGCGGATAT+TGG | 0.310571 | 4.4:-9127672 | MS.gene28396:CDS |
| GTTATTCGCTTCTCTTCTTC+CGG | 0.322943 | 4.4:-9131822 | MS.gene28396:intron |
| TAGGAGGTGAATTGTTAATA+TGG | 0.323433 | 4.4:-9131556 | MS.gene28396:CDS |
| TAGAAGCATCTGCGGATATT+GGG | 0.324017 | 4.4:-9127671 | MS.gene28396:CDS |
| TGTAGCAGAAAGCATGAAAA+TGG | 0.326121 | 4.4:-9127724 | MS.gene28396:CDS |
| TCAGGGGAATTGTTAGCTTC+TGG | 0.327465 | 4.4:-9131695 | MS.gene28396:intron |
| TACCAGGTAATATCTGTTAC+TGG | 0.342872 | 4.4:+9128109 | None:intergenic |
| GGGGTAGCCTGGGACCCTTT+AGG | 0.345674 | 4.4:-9130560 | MS.gene28396:CDS |
| ACGGCAAATACAATGCGATA+TGG | 0.353051 | 4.4:+9128211 | None:intergenic |
| GCGAGGAGAATGCTAAATAA+TGG | 0.354160 | 4.4:+9127976 | None:intergenic |
| TCTTAAGAACCTTCCATGTT+TGG | 0.355215 | 4.4:+9131510 | None:intergenic |
| TTTCTAGAAAAGATCTTTCT+CGG | 0.365269 | 4.4:-9129490 | MS.gene28396:intron |
| TGATAATTCTTGCATTATAT+GGG | 0.369746 | 4.4:-9130747 | MS.gene28396:CDS |
| GACGTGATCATCAAATCAAC+TGG | 0.376440 | 4.4:-9127600 | MS.gene28396:CDS |
| GCTTCACTTTGTTTACCATC+TGG | 0.376477 | 4.4:+9127306 | None:intergenic |
| TAAATACAAGTACCTGAATT+TGG | 0.379771 | 4.4:+9129224 | None:intergenic |
| ATTTCAGGTTCTTACAAAAT+CGG | 0.390240 | 4.4:-9129548 | MS.gene28396:intron |
| GGGGCTTACTGATGTAAATT+CGG | 0.412302 | 4.4:+9130501 | None:intergenic |
| GTCGAAATCGGCGCCGGCGG+TGG | 0.417147 | 4.4:+9132049 | None:intergenic |
| GAGTACCTTGATGTCGAAAT+CGG | 0.419824 | 4.4:+9132037 | None:intergenic |
| AATGATGCTGTACTGCCAAC+TGG | 0.420457 | 4.4:-9127762 | MS.gene28396:CDS |
| ATGAAAATCTAGAGTCAAAA+CGG | 0.424835 | 4.4:+9132091 | None:intergenic |
| TCTCCAATAGCAATATTTGC+TGG | 0.427714 | 4.4:-9128145 | MS.gene28396:CDS |
| TACCCATGCACACTATGTTC+AGG | 0.428891 | 4.4:-9130582 | MS.gene28396:CDS |
| CGGCAAATACAATGCGATAT+GGG | 0.436720 | 4.4:+9128212 | None:intergenic |
| CGAGGAGAATGCTAAATAAT+GGG | 0.437934 | 4.4:+9127977 | None:intergenic |
| AGTTGGCAGTACAGCATCAT+TGG | 0.441293 | 4.4:+9127764 | None:intergenic |
| AAGCAATATACTTCCCTAAA+GGG | 0.441686 | 4.4:+9130546 | None:intergenic |
| CAAAACTGTAATACAAGATA+AGG | 0.454159 | 4.4:-9127628 | MS.gene28396:CDS |
| TCATTTCTACTTGTGCCTGC+AGG | 0.457534 | 4.4:-9130228 | MS.gene28396:intron |
| TGATGTAAATTCGGCAAGTC+CGG | 0.458166 | 4.4:+9130510 | None:intergenic |
| GAAGCAATATACTTCCCTAA+AGG | 0.462365 | 4.4:+9130545 | None:intergenic |
| AGATGGTTTCTGCTCTTTGG+TGG | 0.462913 | 4.4:-9127952 | MS.gene28396:CDS |
| CCCTTAAGCTTAAATAATAC+AGG | 0.469969 | 4.4:+9129248 | None:intergenic |
| AGGCCAGCAAATATTGCTAT+TGG | 0.470462 | 4.4:+9128142 | None:intergenic |
| GAAAATGGAAGTGGAAGAAA+AGG | 0.470474 | 4.4:-9127709 | MS.gene28396:CDS |
| CTTTCTTTAGAAGATTAGCT+TGG | 0.475618 | 4.4:-9130263 | MS.gene28396:CDS |
| GATGGTGGATATATCATATC+CGG | 0.477811 | 4.4:-9130776 | MS.gene28396:CDS |
| AGCTAATCTTCTAAAGAAAG+AGG | 0.478727 | 4.4:+9130266 | None:intergenic |
| AATGCTAAATAATGGGCATC+AGG | 0.480540 | 4.4:+9127984 | None:intergenic |
| GGAAGGTTCTTAAGATGTTA+CGG | 0.484149 | 4.4:-9131502 | MS.gene28396:intron |
| TTGTTAGCTTCTGGTTCTGA+TGG | 0.487437 | 4.4:-9131686 | MS.gene28396:intron |
| GCAAGAATTATCAACTGATC+CGG | 0.489164 | 4.4:+9130757 | None:intergenic |
| GGCGCCGGCGGTGGCGAGAG+TGG | 0.492172 | 4.4:+9132058 | None:intergenic |
| TTGCTTCTCTTAGTTCTGAC+CGG | 0.499917 | 4.4:-9130529 | MS.gene28396:CDS |
| CTATTGACATAAGTAACTAC+TGG | 0.500469 | 4.4:+9131873 | None:intergenic |
| TCCTCCACTCTCGCCACCGC+CGG | 0.506417 | 4.4:-9132062 | MS.gene28396:CDS |
| TGAAAATCTAGAGTCAAAAC+GGG | 0.514160 | 4.4:+9132092 | None:intergenic |
| TGTTCTAGAAGAAAATGTCT+TGG | 0.518483 | 4.4:-9127814 | MS.gene28396:intron |
| TCTAGAAGAAAATGTCTTGG+AGG | 0.520903 | 4.4:-9127811 | MS.gene28396:intron |
| TCAACACCCTTTGATTTATG+GGG | 0.521191 | 4.4:+9130482 | None:intergenic |
| GAGTTCGAAAATGACGAACT+TGG | 0.523533 | 4.4:-9127930 | MS.gene28396:CDS |
| CTCCAGTAACAGATATTACC+TGG | 0.525209 | 4.4:-9128111 | MS.gene28396:intron |
| ACCCATGCACACTATGTTCA+GGG | 0.526102 | 4.4:-9130581 | MS.gene28396:CDS |
| CAGTAAGCCCCATAAATCAA+AGG | 0.530540 | 4.4:-9130489 | MS.gene28396:CDS |
| ACAAAGTGAAGCAGAAGAGA+AGG | 0.531573 | 4.4:-9127295 | MS.gene28396:CDS |
| GTACTGCCAACTGGGAGTGT+TGG | 0.531914 | 4.4:-9127753 | MS.gene28396:CDS |
| CAGCATCATTGGCTGTCTGA+AGG | 0.533000 | 4.4:+9127775 | None:intergenic |
| GCACACGGAAGCTGTATAGC+AGG | 0.533198 | 4.4:+9129302 | None:intergenic |
| AAGCTACATTCAACGGATAC+CGG | 0.534046 | 4.4:-9131533 | MS.gene28396:CDS |
| ACAAGTAGAAATGAACCATC+TGG | 0.534204 | 4.4:+9130237 | None:intergenic |
| GCCATTATTAAAGAATTCCA+AGG | 0.535247 | 4.4:-9130414 | MS.gene28396:intron |
| ATACTTCCCTAAAGGGTCCC+AGG | 0.540607 | 4.4:+9130553 | None:intergenic |
| CATGGGTATCCAACGTCTGA+AGG | 0.542223 | 4.4:+9130597 | None:intergenic |
| CTGAATTAGATCTCATGTCA+AGG | 0.544197 | 4.4:-9130825 | MS.gene28396:intron |
| TGCTTACTTGATAAGCAGTA+AGG | 0.544917 | 4.4:+9127903 | None:intergenic |
| CACCATCAGTAGACCACTCC+AGG | 0.547065 | 4.4:+9130792 | None:intergenic |
| AAGAACCTTCCATGTTTGGC+CGG | 0.550032 | 4.4:+9131514 | None:intergenic |
| AAGAGGGCAATGTTTCATCA+TGG | 0.552525 | 4.4:+9130283 | None:intergenic |
| AGTAAGCCCCATAAATCAAA+GGG | 0.552990 | 4.4:-9130488 | MS.gene28396:CDS |
| AGAAGCATCTGCGGATATTG+GGG | 0.556121 | 4.4:-9127670 | MS.gene28396:CDS |
| CAATGAATTCAATGTGGCCA+CGG | 0.558304 | 4.4:+9128192 | None:intergenic |
| AGCATCATTGGCTGTCTGAA+GGG | 0.562358 | 4.4:+9127776 | None:intergenic |
| CTTGATGTCGAAATCGGCGC+CGG | 0.562663 | 4.4:+9132043 | None:intergenic |
| AGAAAGCATGAAAATGGAAG+TGG | 0.567606 | 4.4:-9127718 | MS.gene28396:CDS |
| GATCGAAGATCGAAAATGAA+AGG | 0.568510 | 4.4:-9132149 | None:intergenic |
| CAACGGATACCGGCCAAACA+TGG | 0.571072 | 4.4:-9131523 | MS.gene28396:CDS |
| TTAGCATTCTCCTCGCAAGA+TGG | 0.577028 | 4.4:-9127969 | MS.gene28396:CDS |
| GATGTCGAAATCGGCGCCGG+CGG | 0.578100 | 4.4:+9132046 | None:intergenic |
| GCTAATCTTCTAAAGAAAGA+GGG | 0.578416 | 4.4:+9130267 | None:intergenic |
| GTGGCGAGAGTGGAGGAGAG+AGG | 0.578840 | 4.4:+9132068 | None:intergenic |
| AATATGGAAGCTACATTCAA+CGG | 0.583979 | 4.4:-9131540 | MS.gene28396:CDS |
| ATATCGCATTGTATTTGCCG+TGG | 0.587379 | 4.4:-9128209 | MS.gene28396:CDS |
| GACCTGGAGTGGTCTACTGA+TGG | 0.591206 | 4.4:-9130794 | MS.gene28396:CDS |
| CGAAGATCGAAAATGAAAGG+TGG | 0.592725 | 4.4:-9132146 | None:intergenic |
| CGGCGCCGATTTCGACATCA+AGG | 0.597052 | 4.4:-9132042 | MS.gene28396:intron |
| GGAAGAAAAGGTTGATGACA+TGG | 0.598747 | 4.4:-9127697 | MS.gene28396:CDS |
| ATGATGCTGTACTGCCAACT+GGG | 0.600017 | 4.4:-9127761 | MS.gene28396:CDS |
| TGTCAAGGACATTATGGACC+TGG | 0.600660 | 4.4:-9130810 | MS.gene28396:CDS |
| ATCGAAAATGAAAGGTGGAA+CGG | 0.602727 | 4.4:-9132141 | None:intergenic |
| GCCGGCGGTGGCGAGAGTGG+AGG | 0.602972 | 4.4:+9132061 | None:intergenic |
| ATGCTGTCCGAAGTTGATTG+TGG | 0.605226 | 4.4:+9127264 | None:intergenic |
| CTGGAGTGGTCTACTGATGG+TGG | 0.606311 | 4.4:-9130791 | MS.gene28396:CDS |
| AGATTAGCTTGGTCTCCAGA+TGG | 0.606836 | 4.4:-9130252 | MS.gene28396:CDS |
| CCCCTGAACATAGTGTGCAT+GGG | 0.610840 | 4.4:+9130580 | None:intergenic |
| ACAACAGCTTTGCTTGCACA+CGG | 0.611738 | 4.4:+9129287 | None:intergenic |
| AGGAACTAACCTTCAGACGT+TGG | 0.618886 | 4.4:-9130606 | MS.gene28396:CDS |
| AGATAAACCACAATCAACTT+CGG | 0.619414 | 4.4:-9127271 | MS.gene28396:CDS |
| AAACAACCAGCTAATCCAGA+TGG | 0.634861 | 4.4:-9127321 | MS.gene28396:intron |
| ATTATATGGGATGTTAACAA+AGG | 0.639783 | 4.4:-9130734 | MS.gene28396:intron |
| GGATACCGGCCAAACATGGA+AGG | 0.640280 | 4.4:-9131519 | MS.gene28396:CDS |
| CTGTTACTGGAGCATAGTGA+AGG | 0.641031 | 4.4:+9128122 | None:intergenic |
| CCCATGCACACTATGTTCAG+GGG | 0.644214 | 4.4:-9130580 | MS.gene28396:CDS |
| AGGACATTATGGACCTGGAG+TGG | 0.656666 | 4.4:-9130805 | MS.gene28396:CDS |
| ACTGCACCAACACTCCCAGT+TGG | 0.657606 | 4.4:+9127747 | None:intergenic |
| CATGGACATAGAAGCATCTG+CGG | 0.658877 | 4.4:-9127679 | MS.gene28396:CDS |
| AGAGCAGAAACCATCTTGCG+AGG | 0.660888 | 4.4:+9127959 | None:intergenic |
| ACGTGATCATCAAATCAACT+GGG | 0.672733 | 4.4:-9127599 | MS.gene28396:CDS |
| CCATGCACACTATGTTCAGG+GGG | 0.683808 | 4.4:-9130579 | MS.gene28396:CDS |
| AATGTACAATGAATTCAATG+TGG | 0.699967 | 4.4:+9128186 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTATTTTAAATTAAAA+CGG | + | chr4.4:9128367-9128386 | None:intergenic | 0.0% |
| !!! | ATGATGTTTTTTTTTTTTTT+TGG | - | chr4.4:9131350-9131369 | MS.gene28396:intron | 10.0% |
| !!! | ATTATTTAGCTTTTTTTTTT+AGG | - | chr4.4:9127957-9127976 | MS.gene28396:CDS | 10.0% |
| !!! | TGATGTTTTTTTTTTTTTTT+GGG | - | chr4.4:9131351-9131370 | MS.gene28396:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTCA+GGG | - | chr4.4:9127684-9127703 | MS.gene28396:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTATGTTTC+AGG | - | chr4.4:9127683-9127702 | MS.gene28396:CDS | 10.0% |
| !! | AAAGGTTATTATTATTTCAT+AGG | - | chr4.4:9128431-9128450 | MS.gene28396:intron | 15.0% |
| !! | AGACAATTATTGAATAAATA+GGG | - | chr4.4:9130538-9130557 | MS.gene28396:CDS | 15.0% |
| !! | TAACTAATTAATTGAATGAT+GGG | + | chr4.4:9127402-9127421 | None:intergenic | 15.0% |
| !! | TAGACAATTATTGAATAAAT+AGG | - | chr4.4:9130537-9130556 | MS.gene28396:CDS | 15.0% |
| !! | TTAACTAATTAATTGAATGA+TGG | + | chr4.4:9127403-9127422 | None:intergenic | 15.0% |
| !!! | AACTAACAATACATAAATTT+TGG | + | chr4.4:9129646-9129665 | None:intergenic | 15.0% |
| !!! | ATGATGGTTTTTATAATATT+GGG | + | chr4.4:9130292-9130311 | None:intergenic | 15.0% |
| !!! | CTATTTTTTTGTTTCTTTTT+AGG | - | chr4.4:9127821-9127840 | MS.gene28396:intron | 15.0% |
| !!! | TTTTTTTTTTTATGTTTCAG+GGG | - | chr4.4:9127685-9127704 | MS.gene28396:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTTTGGGAA+AGG | - | chr4.4:9131356-9131375 | MS.gene28396:intron | 15.0% |
| !! | AAATAGTATATATCATTCAG+TGG | + | chr4.4:9129755-9129774 | None:intergenic | 20.0% |
| !! | ACCAATAATATTGATATTGT+AGG | + | chr4.4:9130815-9130834 | None:intergenic | 20.0% |
| !! | CAATATTATAAAAACCATCA+TGG | - | chr4.4:9130291-9130310 | MS.gene28396:CDS | 20.0% |
| !! | GCAAAAAAAGTAAGATAAAT+TGG | + | chr4.4:9129223-9129242 | None:intergenic | 20.0% |
| !! | TAACAATCTTTACTAATAAG+AGG | + | chr4.4:9130422-9130441 | None:intergenic | 20.0% |
| !! | TACAATATCAATATTATTGG+TGG | - | chr4.4:9130814-9130833 | MS.gene28396:CDS | 20.0% |
| !! | TATTTCTCTCTTTCATTAAA+TGG | + | chr4.4:9128062-9128081 | None:intergenic | 20.0% |
| !! | TCCGTTCAATTTATTAAAAT+AGG | - | chr4.4:9130347-9130366 | MS.gene28396:intron | 20.0% |
| !! | TCCTACAATATCAATATTAT+TGG | - | chr4.4:9130811-9130830 | MS.gene28396:CDS | 20.0% |
| !! | TGATAATTCTTGCATTATAT+GGG | - | chr4.4:9128649-9128668 | MS.gene28396:intron | 20.0% |
| !! | TTATTAGTAAAGATTGTTAG+AGG | - | chr4.4:9130423-9130442 | MS.gene28396:CDS | 20.0% |
| !! | TTGTTTATCTATTGATATAG+TGG | - | chr4.4:9130986-9131005 | MS.gene28396:intron | 20.0% |
| !! | TTTCAATGAAATGAATTTAC+CGG | + | chr4.4:9127596-9127615 | None:intergenic | 20.0% |
| !!! | AAGAAAATTATTGATTTCCT+AGG | - | chr4.4:9128178-9128197 | MS.gene28396:CDS | 20.0% |
| !!! | AATGATAAAAAGTATGCTTT+TGG | + | chr4.4:9129962-9129981 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTGATTTCTTTC+TGG | - | chr4.4:9128390-9128409 | MS.gene28396:intron | 20.0% |
| !!! | ACTTTAAAATAATGATTGGT+AGG | + | chr4.4:9131086-9131105 | None:intergenic | 20.0% |
| !!! | ATGATAAAAAGTATGCTTTT+GGG | + | chr4.4:9129961-9129980 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTCTATTTCTTAT+TGG | - | chr4.4:9130842-9130861 | MS.gene28396:intron | 20.0% |
| !!! | CAGAACTTTAAAATAATGAT+TGG | + | chr4.4:9131090-9131109 | None:intergenic | 20.0% |
| !!! | CATGATGGTTTTTATAATAT+TGG | + | chr4.4:9130293-9130312 | None:intergenic | 20.0% |
| !!! | GCCTATTTTAATAAATTGAA+CGG | + | chr4.4:9130351-9130370 | None:intergenic | 20.0% |
| !!! | TATACTATTTTCTTCCTTTA+TGG | - | chr4.4:9129765-9129784 | MS.gene28396:intron | 20.0% |
| !!! | TTGATAATTCTTGCATTATA+TGG | - | chr4.4:9128648-9128667 | MS.gene28396:intron | 20.0% |
| !!! | TTTTTATAATATTGGGCAAA+AGG | + | chr4.4:9130285-9130304 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTTCTTTTTAGG+AGG | - | chr4.4:9127824-9127843 | MS.gene28396:intron | 20.0% |
| ! | AAAAAGAAAAATCAACAGCA+GGG | + | chr4.4:9127748-9127767 | None:intergenic | 25.0% |
| ! | AAAAGTAGATATGGAAGTAA+AGG | - | chr4.4:9128413-9128432 | MS.gene28396:intron | 25.0% |
| ! | AACTAGTTATACATAGTTAC+TGG | + | chr4.4:9130201-9130220 | None:intergenic | 25.0% |
| ! | AATCATAGCATGAAATGAAA+GGG | + | chr4.4:9131524-9131543 | None:intergenic | 25.0% |
| ! | AATCTCTATGCAATTATGAT+AGG | + | chr4.4:9129530-9129549 | None:intergenic | 25.0% |
| ! | AATGTACAATGAATTCAATG+TGG | + | chr4.4:9131213-9131232 | None:intergenic | 25.0% |
| ! | ACCTTGGAATTCTTTAATAA+TGG | + | chr4.4:9128986-9129005 | None:intergenic | 25.0% |
| ! | AGAAATCTAATCAGAAACAT+TGG | + | chr4.4:9127803-9127822 | None:intergenic | 25.0% |
| ! | AGCTAAATAATGCAAATAAG+TGG | + | chr4.4:9127948-9127967 | None:intergenic | 25.0% |
| ! | ATAGTTTAGATGCAACTTAT+AGG | - | chr4.4:9129724-9129743 | MS.gene28396:intron | 25.0% |
| ! | ATTATATGGGATGTTAACAA+AGG | - | chr4.4:9128662-9128681 | MS.gene28396:intron | 25.0% |
| ! | ATTATTTAACCTTGATATGC+AGG | - | chr4.4:9130071-9130090 | MS.gene28396:intron | 25.0% |
| ! | ATTGATGCAGTAAAACATAA+AGG | + | chr4.4:9128527-9128546 | None:intergenic | 25.0% |
| ! | CAAAACTGTAATACAAGATA+AGG | - | chr4.4:9131768-9131787 | MS.gene28396:intron | 25.0% |
| ! | CAAAATAAGAACTTGAAATG+TGG | - | chr4.4:9128226-9128245 | MS.gene28396:CDS | 25.0% |
| ! | CCTGTATTATTTAAGCTTAA+GGG | - | chr4.4:9130148-9130167 | MS.gene28396:intron | 25.0% |
| ! | TAAATACAAGTACCTGAATT+TGG | + | chr4.4:9130175-9130194 | None:intergenic | 25.0% |
| ! | TAGGGAAATTGAATATTGAT+TGG | - | chr4.4:9130556-9130575 | MS.gene28396:CDS | 25.0% |
| ! | TATGATAGGATACTGAATTT+GGG | + | chr4.4:9129516-9129535 | None:intergenic | 25.0% |
| ! | TCCTGTATTATTTAAGCTTA+AGG | - | chr4.4:9130147-9130166 | MS.gene28396:intron | 25.0% |
| ! | TGTGTATTATTCATTGCAAA+TGG | - | chr4.4:9129302-9129321 | MS.gene28396:CDS | 25.0% |
| ! | TTACCTGGTAAATGTTATAA+CGG | - | chr4.4:9131300-9131319 | MS.gene28396:intron | 25.0% |
| ! | TTAGACAGGTTTATGTTATT+AGG | - | chr4.4:9130481-9130500 | MS.gene28396:CDS | 25.0% |
| ! | TTATGATAGGATACTGAATT+TGG | + | chr4.4:9129517-9129536 | None:intergenic | 25.0% |
| ! | TTCCTGTGAATGAAATATAA+TGG | + | chr4.4:9129590-9129609 | None:intergenic | 25.0% |
| !! | ATGAAAATCTAGAGTCAAAA+CGG | + | chr4.4:9127308-9127327 | None:intergenic | 25.0% |
| !! | ATTTTGTAAGAACCTGAAAT+GGG | + | chr4.4:9129848-9129867 | None:intergenic | 25.0% |
| !! | GATTTTCTGTTATAAAACAG+AGG | + | chr4.4:9129445-9129464 | None:intergenic | 25.0% |
| !! | TTTCTAGAAAAGATCTTTCT+CGG | - | chr4.4:9129906-9129925 | MS.gene28396:intron | 25.0% |
| !!! | AATGGGTTCTTTTACAAATT+AGG | + | chr4.4:9130659-9130678 | None:intergenic | 25.0% |
| !!! | ATTTCAGGTTCTTACAAAAT+CGG | - | chr4.4:9129848-9129867 | MS.gene28396:intron | 25.0% |
| !!! | GTATGATTGATTTTTGTGAA+TGG | + | chr4.4:9128478-9128497 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTTTATTGCAGAT+GGG | - | chr4.4:9131150-9131169 | MS.gene28396:intron | 25.0% |
| !!! | TTCTAGAACAATGTAGAAAA+GGG | + | chr4.4:9131572-9131591 | None:intergenic | 25.0% |
| AAGCAATATACTTCCCTAAA+GGG | + | chr4.4:9128853-9128872 | None:intergenic | 30.0% | |
| AATATGGAAGCTACATTCAA+CGG | - | chr4.4:9127856-9127875 | MS.gene28396:intron | 30.0% | |
| AATGCGATGATAAATAGAGA+AGG | - | chr4.4:9128087-9128106 | MS.gene28396:intron | 30.0% | |
| ACAGTTCACTAAACAACAAA+GGG | + | chr4.4:9129701-9129720 | None:intergenic | 30.0% | |
| AGAACATAAAGCTGATGATA+TGG | - | chr4.4:9131861-9131880 | MS.gene28396:CDS | 30.0% | |
| AGATAAACCACAATCAACTT+CGG | - | chr4.4:9132125-9132144 | MS.gene28396:CDS | 30.0% | |
| ATAACATAAACCTGTCTAAC+TGG | + | chr4.4:9130480-9130499 | None:intergenic | 30.0% | |
| ATATTTCATTCACAGGAAAG+TGG | - | chr4.4:9129592-9129611 | MS.gene28396:intron | 30.0% | |
| ATGCGATGATAAATAGAGAA+GGG | - | chr4.4:9128088-9128107 | MS.gene28396:intron | 30.0% | |
| ATTGGATCAAGATTAACTTC+TGG | + | chr4.4:9129205-9129224 | None:intergenic | 30.0% | |
| CAAAAAGAAAAATCAACAGC+AGG | + | chr4.4:9127749-9127768 | None:intergenic | 30.0% | |
| CATCAATTAGCTGGTTAAAA+TGG | - | chr4.4:9128540-9128559 | MS.gene28396:intron | 30.0% | |
| CCCTTAAGCTTAAATAATAC+AGG | + | chr4.4:9130151-9130170 | None:intergenic | 30.0% | |
| CTATTGACATAAGTAACTAC+TGG | + | chr4.4:9127526-9127545 | None:intergenic | 30.0% | |
| CTGTTATAAAACAGAGGATA+GGG | + | chr4.4:9129439-9129458 | None:intergenic | 30.0% | |
| GAATCATAGCATGAAATGAA+AGG | + | chr4.4:9131525-9131544 | None:intergenic | 30.0% | |
| GCCATTATTAAAGAATTCCA+AGG | - | chr4.4:9128982-9129001 | MS.gene28396:intron | 30.0% | |
| GTCCATTATATTTCATTCAC+AGG | - | chr4.4:9129585-9129604 | MS.gene28396:intron | 30.0% | |
| GTGAATAAGCTATTGCAATT+TGG | - | chr4.4:9129252-9129271 | MS.gene28396:CDS | 30.0% | |
| TACAATTGAATTGCTTGAGT+GGG | - | chr4.4:9130235-9130254 | MS.gene28396:CDS | 30.0% | |
| TAGGAGGTGAATTGTTAATA+TGG | - | chr4.4:9127840-9127859 | MS.gene28396:intron | 30.0% | |
| TATGGTCATTGAAGAAGTTA+CGG | - | chr4.4:9131879-9131898 | MS.gene28396:CDS | 30.0% | |
| TATTAGGAAAAATGAAGCAG+AGG | - | chr4.4:9131906-9131925 | MS.gene28396:CDS | 30.0% | |
| TCTGTTATAAAACAGAGGAT+AGG | + | chr4.4:9129440-9129459 | None:intergenic | 30.0% | |
| TGCTAACTAATTGTCGATAA+CGG | - | chr4.4:9128030-9128049 | MS.gene28396:intron | 30.0% | |
| TGTTATAAAACAGAGGATAG+GGG | + | chr4.4:9129438-9129457 | None:intergenic | 30.0% | |
| TGTTCTAATCTTCACAGTTA+TGG | - | chr4.4:9127467-9127486 | MS.gene28396:intron | 30.0% | |
| TTACAATTGAATTGCTTGAG+TGG | - | chr4.4:9130234-9130253 | MS.gene28396:CDS | 30.0% | |
| TTTAAATGTAGAAGAAGCCA+AGG | + | chr4.4:9128326-9128345 | None:intergenic | 30.0% | |
| ! | ACTCTAACACTCTTTTATTG+GGG | + | chr4.4:9130926-9130945 | None:intergenic | 30.0% |
| ! | AGCTAATCTTCTAAAGAAAG+AGG | + | chr4.4:9129133-9129152 | None:intergenic | 30.0% |
| ! | ATCAAGATTAACTTCTGGTT+AGG | + | chr4.4:9129200-9129219 | None:intergenic | 30.0% |
| ! | CACTCTAACACTCTTTTATT+GGG | + | chr4.4:9130927-9130946 | None:intergenic | 30.0% |
| ! | CTTTCTTTAGAAGATTAGCT+TGG | - | chr4.4:9129133-9129152 | MS.gene28396:intron | 30.0% |
| ! | GATTTTGTAAGAACCTGAAA+TGG | + | chr4.4:9129849-9129868 | None:intergenic | 30.0% |
| ! | GCTAATCTTCTAAAGAAAGA+GGG | + | chr4.4:9129132-9129151 | None:intergenic | 30.0% |
| ! | TAGATATCTAAAGCTAACCT+TGG | + | chr4.4:9129002-9129021 | None:intergenic | 30.0% |
| ! | TCACTCTAACACTCTTTTAT+TGG | + | chr4.4:9130928-9130947 | None:intergenic | 30.0% |
| ! | TCTTTCTGGAAAAGTAGATA+TGG | - | chr4.4:9128404-9128423 | MS.gene28396:intron | 30.0% |
| ! | TGAAAATCTAGAGTCAAAAC+GGG | + | chr4.4:9127307-9127326 | None:intergenic | 30.0% |
| !! | AGAAGGGTATCAAAGAAAAA+AGG | - | chr4.4:9128104-9128123 | MS.gene28396:intron | 30.0% |
| !! | CTTCTAGAACAATGTAGAAA+AGG | + | chr4.4:9131573-9131592 | None:intergenic | 30.0% |
| !! | TATGTATAACTAGTTCTACG+TGG | - | chr4.4:9130206-9130225 | MS.gene28396:intron | 30.0% |
| !! | TGTTCTAGAAGAAAATGTCT+TGG | - | chr4.4:9131582-9131601 | MS.gene28396:intron | 30.0% |
| !! | TTGCAAGCATGTTATTTCTA+AGG | - | chr4.4:9128952-9128971 | MS.gene28396:intron | 30.0% |
| !!! | CTGTTTTTGTTTATTGCAGA+TGG | - | chr4.4:9131149-9131168 | MS.gene28396:intron | 30.0% |
| AAGAAGTTACGGCAGATATT+AGG | - | chr4.4:9131890-9131909 | MS.gene28396:CDS | 35.0% | |
| AATAAACCGCTTAGTGGTTT+AGG | - | chr4.4:9132018-9132037 | MS.gene28396:intron | 35.0% | |
| ACAACTAGGACTGCAAATAT+TGG | - | chr4.4:9131955-9131974 | MS.gene28396:intron | 35.0% | |
| ACAAGTAGAAATGAACCATC+TGG | + | chr4.4:9129162-9129181 | None:intergenic | 35.0% | |
| ACAGAAAATAAACCGCTTAG+TGG | - | chr4.4:9132012-9132031 | MS.gene28396:intron | 35.0% | |
| ACATGATCATTGAGACAACT+AGG | - | chr4.4:9131941-9131960 | MS.gene28396:intron | 35.0% | |
| ACCAAAACTCTCGAATTTCT+GGG | - | chr4.4:9130584-9130603 | MS.gene28396:CDS | 35.0% | |
| ACGTGATCATCAAATCAACT+GGG | - | chr4.4:9131797-9131816 | MS.gene28396:intron | 35.0% | |
| AGATCCACTCCTAATATAGT+GGG | - | chr4.4:9130884-9130903 | MS.gene28396:intron | 35.0% | |
| AGTAAGCCCCATAAATCAAA+GGG | - | chr4.4:9128908-9128927 | MS.gene28396:intron | 35.0% | |
| AGTTCACTAAACAACAAAGG+GGG | + | chr4.4:9129699-9129718 | None:intergenic | 35.0% | |
| ATAAGAACTTGAAATGTGGC+AGG | - | chr4.4:9128230-9128249 | MS.gene28396:CDS | 35.0% | |
| ATCAAATCAACTGGGAATGT+TGG | - | chr4.4:9131805-9131824 | MS.gene28396:intron | 35.0% | |
| ATCTCATGTCAAGGACATTA+TGG | - | chr4.4:9128580-9128599 | MS.gene28396:intron | 35.0% | |
| ATGCAAATAAGTGGTCATCA+AGG | + | chr4.4:9127939-9127958 | None:intergenic | 35.0% | |
| CACAGTTCACTAAACAACAA+AGG | + | chr4.4:9129702-9129721 | None:intergenic | 35.0% | |
| CACATTTCAAACAAGCTGTA+AGG | - | chr4.4:9128297-9128316 | MS.gene28396:intron | 35.0% | |
| CAGTTCACTAAACAACAAAG+GGG | + | chr4.4:9129700-9129719 | None:intergenic | 35.0% | |
| CGAGGAGAATGCTAAATAAT+GGG | + | chr4.4:9131422-9131441 | None:intergenic | 35.0% | |
| CTGAATTAGATCTCATGTCA+AGG | - | chr4.4:9128571-9128590 | MS.gene28396:intron | 35.0% | |
| GAAAAGGGAAATCAAAAACC+TGG | + | chr4.4:9131557-9131576 | None:intergenic | 35.0% | |
| GAAAATGGAAGTGGAAGAAA+AGG | - | chr4.4:9131687-9131706 | MS.gene28396:CDS | 35.0% | |
| GAAGCAATATACTTCCCTAA+AGG | + | chr4.4:9128854-9128873 | None:intergenic | 35.0% | |
| GACTGTGACAATATTCTGTT+AGG | + | chr4.4:9129472-9129491 | None:intergenic | 35.0% | |
| GCAAGAATTATCAACTGATC+CGG | + | chr4.4:9128642-9128661 | None:intergenic | 35.0% | |
| GCTTAAAGCTCTTAAAACTG+TGG | - | chr4.4:9129329-9129348 | MS.gene28396:intron | 35.0% | |
| GGAAGGTTCTTAAGATGTTA+CGG | - | chr4.4:9127894-9127913 | MS.gene28396:intron | 35.0% | |
| GGTTTAGGCAGTATTAATTC+TGG | - | chr4.4:9132033-9132052 | MS.gene28396:intron | 35.0% | |
| GTAGTCCGTATTTGTTCAAA+AGG | - | chr4.4:9131386-9131405 | MS.gene28396:intron | 35.0% | |
| GTGACAATATTCTGTTAGGA+GGG | + | chr4.4:9129468-9129487 | None:intergenic | 35.0% | |
| GTGCAATTATAGCTGACAAT+AGG | - | chr4.4:9131827-9131846 | MS.gene28396:CDS | 35.0% | |
| TACCAGGTAATATCTGTTAC+TGG | + | chr4.4:9131290-9131309 | None:intergenic | 35.0% | |
| TAGCCGTTATAACATTTACC+AGG | + | chr4.4:9131306-9131325 | None:intergenic | 35.0% | |
| TATTGCAATTTGGTAGAACC+TGG | - | chr4.4:9129262-9129281 | MS.gene28396:CDS | 35.0% | |
| TATTGGGGTAAAACTCATGT+AGG | + | chr4.4:9130911-9130930 | None:intergenic | 35.0% | |
| TCACAGTCATCACATCAATT+GGG | - | chr4.4:9129484-9129503 | MS.gene28396:intron | 35.0% | |
| TCTAGAAGAAAATGTCTTGG+AGG | - | chr4.4:9131585-9131604 | MS.gene28396:intron | 35.0% | |
| TCTTAAGAACCTTCCATGTT+TGG | + | chr4.4:9127889-9127908 | None:intergenic | 35.0% | |
| TGACAATATTCTGTTAGGAG+GGG | + | chr4.4:9129467-9129486 | None:intergenic | 35.0% | |
| TGCTTACTTGATAAGCAGTA+AGG | + | chr4.4:9131496-9131515 | None:intergenic | 35.0% | |
| TGTGACAATATTCTGTTAGG+AGG | + | chr4.4:9129469-9129488 | None:intergenic | 35.0% | |
| TTATGGTCAGTTAAACCTTC+TGG | - | chr4.4:9127484-9127503 | MS.gene28396:intron | 35.0% | |
| TTCTGAACATGCTTTAACAG+TGG | - | chr4.4:9128707-9128726 | MS.gene28396:intron | 35.0% | |
| ! | AGAAAGCATGAAAATGGAAG+TGG | - | chr4.4:9131678-9131697 | MS.gene28396:intron | 35.0% |
| ! | AGGTTAGTTCCTGACATAAA+TGG | + | chr4.4:9128782-9128801 | None:intergenic | 35.0% |
| ! | AGTGAGTAAAGCATTCAGTT+AGG | + | chr4.4:9129415-9129434 | None:intergenic | 35.0% |
| ! | CTATGATTCTAACTTGTACC+AGG | - | chr4.4:9131536-9131555 | MS.gene28396:CDS | 35.0% |
| ! | CTCAACACCCTTTGATTTAT+GGG | + | chr4.4:9128918-9128937 | None:intergenic | 35.0% |
| ! | GGTGACCTTTTGAACAAATA+CGG | + | chr4.4:9131394-9131413 | None:intergenic | 35.0% |
| ! | GGTTAGGAGTTCTAATAACT+CGG | + | chr4.4:9129378-9129397 | None:intergenic | 35.0% |
| ! | GTATTTGATTTCGCTGTAGA+TGG | - | chr4.4:9129027-9129046 | MS.gene28396:intron | 35.0% |
| ! | GTTAGGAGTTCTAATAACTC+GGG | + | chr4.4:9129377-9129396 | None:intergenic | 35.0% |
| ! | GTTTTACTGCATCAATTAGC+TGG | - | chr4.4:9128531-9128550 | MS.gene28396:intron | 35.0% |
| ! | TAATTGAATGATGGGAGTGA+AGG | + | chr4.4:9127394-9127413 | None:intergenic | 35.0% |
| ! | TCAACACCCTTTGATTTATG+GGG | + | chr4.4:9128917-9128936 | None:intergenic | 35.0% |
| ! | TCTCAACACCCTTTGATTTA+TGG | + | chr4.4:9128919-9128938 | None:intergenic | 35.0% |
| ! | TGTAGCAGAAAGCATGAAAA+TGG | - | chr4.4:9131672-9131691 | MS.gene28396:intron | 35.0% |
| !! | AAACGAATCATCGACTTGAT+CGG | + | chr4.4:9131041-9131060 | None:intergenic | 35.0% |
| !! | AAGAGTGTTAGAGTGAGTAT+TGG | - | chr4.4:9130932-9130951 | MS.gene28396:intron | 35.0% |
| !! | AATGCTAAATAATGGGCATC+AGG | + | chr4.4:9131415-9131434 | None:intergenic | 35.0% |
| !! | ATTGTAGTTCTGAACAAGCT+TGG | - | chr4.4:9128733-9128752 | MS.gene28396:intron | 35.0% |
| !! | CGGTTTATTTTCTGTGTCTT+CGG | + | chr4.4:9132007-9132026 | None:intergenic | 35.0% |
| !! | GATGGTGGATATATCATATC+CGG | - | chr4.4:9128620-9128639 | MS.gene28396:intron | 35.0% |
| AAACAACCAGCTAATCCAGA+TGG | - | chr4.4:9132075-9132094 | MS.gene28396:CDS | 40.0% | |
| AACAAGCTGTAAGGTTTCCT+TGG | - | chr4.4:9128306-9128325 | MS.gene28396:intron | 40.0% | |
| AAGAGGGCAATGTTTCATCA+TGG | + | chr4.4:9129116-9129135 | None:intergenic | 40.0% | |
| AAGCTACATTCAACGGATAC+CGG | - | chr4.4:9127863-9127882 | MS.gene28396:intron | 40.0% | |
| AAGCTTAAGGGACCAAATTC+AGG | - | chr4.4:9130160-9130179 | MS.gene28396:intron | 40.0% | |
| AATCACTTCACAGTTATCGC+AGG | + | chr4.4:9130688-9130707 | None:intergenic | 40.0% | |
| ACAAAGTGAAGCAGAAGAGA+AGG | - | chr4.4:9132101-9132120 | MS.gene28396:CDS | 40.0% | |
| ACCATTCACTTTGAACCTCT+AGG | + | chr4.4:9130452-9130471 | None:intergenic | 40.0% | |
| ACGGCAAATACAATGCGATA+TGG | + | chr4.4:9131188-9131207 | None:intergenic | 40.0% | |
| AGCTAAGCAGGAATCCATAA+AGG | + | chr4.4:9129782-9129801 | None:intergenic | 40.0% | |
| AGGATACTGAATTTGGGCTT+TGG | + | chr4.4:9129510-9129529 | None:intergenic | 40.0% | |
| ATACTGCCTAAACCACTAAG+CGG | + | chr4.4:9132027-9132046 | None:intergenic | 40.0% | |
| ATATCGCATTGTATTTGCCG+TGG | - | chr4.4:9131187-9131206 | MS.gene28396:intron | 40.0% | |
| CAATGAATTCAATGTGGCCA+CGG | + | chr4.4:9131207-9131226 | None:intergenic | 40.0% | |
| CAGTAAGCCCCATAAATCAA+AGG | - | chr4.4:9128907-9128926 | MS.gene28396:intron | 40.0% | |
| CATGTAGGTCCCACTATATT+AGG | + | chr4.4:9130896-9130915 | None:intergenic | 40.0% | |
| CGGCAAATACAATGCGATAT+GGG | + | chr4.4:9131187-9131206 | None:intergenic | 40.0% | |
| CTCCAGTAACAGATATTACC+TGG | - | chr4.4:9131285-9131304 | MS.gene28396:intron | 40.0% | |
| GAAAAATGAAGCAGAGGAGA+AGG | - | chr4.4:9131912-9131931 | MS.gene28396:CDS | 40.0% | |
| GACCAAAACTCTCGAATTTC+TGG | - | chr4.4:9130583-9130602 | MS.gene28396:CDS | 40.0% | |
| GACGTGATCATCAAATCAAC+TGG | - | chr4.4:9131796-9131815 | MS.gene28396:intron | 40.0% | |
| GAGATCCACTCCTAATATAG+TGG | - | chr4.4:9130883-9130902 | MS.gene28396:intron | 40.0% | |
| GAGTACCTTGATGTCGAAAT+CGG | + | chr4.4:9127362-9127381 | None:intergenic | 40.0% | |
| GAGTTCGAAAATGACGAACT+TGG | - | chr4.4:9131466-9131485 | MS.gene28396:intron | 40.0% | |
| GCACTTGTTCCATTTATGTC+AGG | - | chr4.4:9128770-9128789 | MS.gene28396:intron | 40.0% | |
| GCGAGGAGAATGCTAAATAA+TGG | + | chr4.4:9131423-9131442 | None:intergenic | 40.0% | |
| GGGGCTTACTGATGTAAATT+CGG | + | chr4.4:9128898-9128917 | None:intergenic | 40.0% | |
| GTCACAGTCATCACATCAAT+TGG | - | chr4.4:9129483-9129502 | MS.gene28396:intron | 40.0% | |
| GTGGAACGGTTCAGATTAAT+TGG | - | chr4.4:9127269-9127288 | MS.gene28396:CDS | 40.0% | |
| GTTATTCGCTTCTCTTCTTC+CGG | - | chr4.4:9127574-9127593 | MS.gene28396:intron | 40.0% | |
| TAAAGTTCTGCCTCTTTCAG+AGG | - | chr4.4:9131100-9131119 | MS.gene28396:intron | 40.0% | |
| TGATGTAAATTCGGCAAGTC+CGG | + | chr4.4:9128889-9128908 | None:intergenic | 40.0% | |
| TTGGTAGAACCTGGAAAATC+AGG | - | chr4.4:9129271-9129290 | MS.gene28396:CDS | 40.0% | |
| TTGTCACATACACTGACATC+AGG | - | chr4.4:9129051-9129070 | MS.gene28396:intron | 40.0% | |
| ! | AGCTTCTTTTGTGATCCAGA+AGG | + | chr4.4:9127502-9127521 | None:intergenic | 40.0% |
| ! | AGTTGTTTGCCTGATTTTCC+AGG | + | chr4.4:9129283-9129302 | None:intergenic | 40.0% |
| ! | CTCACGTCACTAACATGTTT+TGG | + | chr4.4:9130044-9130063 | None:intergenic | 40.0% |
| ! | GCTTCACTTTGTTTACCATC+TGG | + | chr4.4:9132093-9132112 | None:intergenic | 40.0% |
| ! | TCCCAGAAATTCGAGAGTTT+TGG | + | chr4.4:9130588-9130607 | None:intergenic | 40.0% |
| !! | AACAGCATCATGCATCGATT+AGG | + | chr4.4:9131134-9131153 | None:intergenic | 40.0% |
| !! | AACGAATCATCGACTTGATC+GGG | + | chr4.4:9131040-9131059 | None:intergenic | 40.0% |
| !! | AACTCTCGAATTTCTGGGAT+AGG | - | chr4.4:9130589-9130608 | MS.gene28396:CDS | 40.0% |
| !! | AAGTTGTTTTGCACGAACCT+AGG | + | chr4.4:9128198-9128217 | None:intergenic | 40.0% |
| !! | AGTTAGGAGAAAGTACTCTC+TGG | + | chr4.4:9129399-9129418 | None:intergenic | 40.0% |
| !! | ATAGAAGCATCTGCGGATAT+TGG | - | chr4.4:9131724-9131743 | MS.gene28396:intron | 40.0% |
| !! | GCAGGTTTTGTGAATTTGGT+TGG | - | chr4.4:9128248-9128267 | MS.gene28396:intron | 40.0% |
| !! | GGAAGAAAAGGTTGATGACA+TGG | - | chr4.4:9131699-9131718 | MS.gene28396:intron | 40.0% |
| !! | TAGAAGCATCTGCGGATATT+GGG | - | chr4.4:9131725-9131744 | MS.gene28396:intron | 40.0% |
| !! | TGTGGCAGGTTTTGTGAATT+TGG | - | chr4.4:9128244-9128263 | MS.gene28396:intron | 40.0% |
| !! | TGTTTACCATCTGGATTAGC+TGG | + | chr4.4:9132084-9132103 | None:intergenic | 40.0% |
| !! | TTGCTTCTCTTAGTTCTGAC+CGG | - | chr4.4:9128867-9128886 | MS.gene28396:intron | 40.0% |
| !! | TTGGTGATCTCCCGTTTTAT+CGG | - | chr4.4:9130861-9130880 | MS.gene28396:intron | 40.0% |
| !! | TTGTTAGCTTCTGGTTCTGA+TGG | - | chr4.4:9127710-9127729 | MS.gene28396:CDS | 40.0% |
| AAATAGGCATGCTGACGAAC+TGG | - | chr4.4:9130363-9130382 | MS.gene28396:intron | 45.0% | |
| AAGAACCTTCCATGTTTGGC+CGG | + | chr4.4:9127885-9127904 | None:intergenic | 45.0% | |
| AATGATGCTGTACTGCCAAC+TGG | - | chr4.4:9131634-9131653 | MS.gene28396:intron | 45.0% | |
| ACAACAGCTTTGCTTGCACA+CGG | + | chr4.4:9130112-9130131 | None:intergenic | 45.0% | |
| ACCCATGCACACTATGTTCA+GGG | - | chr4.4:9128815-9128834 | MS.gene28396:intron | 45.0% | |
| AGATGGTTTCTGCTCTTTGG+TGG | - | chr4.4:9131444-9131463 | MS.gene28396:intron | 45.0% | |
| AGGAACTAACCTTCAGACGT+TGG | - | chr4.4:9128790-9128809 | MS.gene28396:intron | 45.0% | |
| AGGTCCCACTATATTAGGAG+TGG | + | chr4.4:9130891-9130910 | None:intergenic | 45.0% | |
| AGTTATCGCAGGACAGAGAA+TGG | + | chr4.4:9130677-9130696 | None:intergenic | 45.0% | |
| AGTTGGCAGTACAGCATCAT+TGG | + | chr4.4:9131635-9131654 | None:intergenic | 45.0% | |
| ATGATGCTGTACTGCCAACT+GGG | - | chr4.4:9131635-9131654 | MS.gene28396:intron | 45.0% | |
| ATGGTCTGAACCAGTTAGAC+AGG | - | chr4.4:9130467-9130486 | MS.gene28396:CDS | 45.0% | |
| CATCATGGACCAGTTTGACT+GGG | - | chr4.4:9130306-9130325 | MS.gene28396:CDS | 45.0% | |
| CCATGTAGCAAAAGCTAAGC+AGG | + | chr4.4:9129794-9129813 | None:intergenic | 45.0% | |
| CTGTTACTGGAGCATAGTGA+AGG | + | chr4.4:9131277-9131296 | None:intergenic | 45.0% | |
| GAGGTCTAACAATTCTTCGC+CGG | + | chr4.4:9130403-9130422 | None:intergenic | 45.0% | |
| GAGTGGATCTCCGATAAAAC+GGG | + | chr4.4:9130874-9130893 | None:intergenic | 45.0% | |
| GCAAGATGGTTTCTGCTCTT+TGG | - | chr4.4:9131441-9131460 | MS.gene28396:intron | 45.0% | |
| GCCTAGAGGTTCAAAGTGAA+TGG | - | chr4.4:9130448-9130467 | MS.gene28396:CDS | 45.0% | |
| GGAGTGGATCTCCGATAAAA+CGG | + | chr4.4:9130875-9130894 | None:intergenic | 45.0% | |
| GGGGGAAATTAAAAGCTGTC+TGG | + | chr4.4:9129681-9129700 | None:intergenic | 45.0% | |
| GTTATCGCAGGACAGAGAAT+GGG | + | chr4.4:9130676-9130695 | None:intergenic | 45.0% | |
| TACCCATGCACACTATGTTC+AGG | - | chr4.4:9128814-9128833 | MS.gene28396:intron | 45.0% | |
| TATAGCAGGCCTGCATATCA+AGG | + | chr4.4:9130083-9130102 | None:intergenic | 45.0% | |
| TCATTTCTACTTGTGCCTGC+AGG | - | chr4.4:9129168-9129187 | MS.gene28396:intron | 45.0% | |
| TGAATTGCTTGAGTGGGATG+TGG | - | chr4.4:9130241-9130260 | MS.gene28396:CDS | 45.0% | |
| TGTCAAGGACATTATGGACC+TGG | - | chr4.4:9128586-9128605 | MS.gene28396:intron | 45.0% | |
| TTAGCATTCTCCTCGCAAGA+TGG | - | chr4.4:9131427-9131446 | MS.gene28396:intron | 45.0% | |
| TTCACGTCTCTACCCATTTC+AGG | - | chr4.4:9129833-9129852 | MS.gene28396:intron | 45.0% | |
| TTGTTTCGACGCCTTCTCTT+CGG | + | chr4.4:9132061-9132080 | None:intergenic | 45.0% | |
| ! | ACTGGTTCATGTCACAAAGC+CGG | - | chr4.4:9130381-9130400 | MS.gene28396:intron | 45.0% |
| ! | AGCATCATTGGCTGTCTGAA+GGG | + | chr4.4:9131623-9131642 | None:intergenic | 45.0% |
| ! | ATGCTGTCCGAAGTTGATTG+TGG | + | chr4.4:9132135-9132154 | None:intergenic | 45.0% |
| ! | TCAGGGGAATTGTTAGCTTC+TGG | - | chr4.4:9127701-9127720 | MS.gene28396:CDS | 45.0% |
| !! | ACGAATCATCGACTTGATCG+GGG | + | chr4.4:9131039-9131058 | None:intergenic | 45.0% |
| !! | AGAAGCATCTGCGGATATTG+GGG | - | chr4.4:9131726-9131745 | MS.gene28396:intron | 45.0% |
| !! | AGATTAGCTTGGTCTCCAGA+TGG | - | chr4.4:9129144-9129163 | MS.gene28396:intron | 45.0% |
| !! | CATGGACATAGAAGCATCTG+CGG | - | chr4.4:9131717-9131736 | MS.gene28396:intron | 45.0% |
| !! | CCTGCTTAGCTTTTGCTACA+TGG | - | chr4.4:9129791-9129810 | MS.gene28396:intron | 45.0% |
| !! | GGAGAAAGTACTCTCTGGTT+AGG | + | chr4.4:9129394-9129413 | None:intergenic | 45.0% |
| !! | TAATTCTGGAGCCGAAGAGA+AGG | - | chr4.4:9132047-9132066 | MS.gene28396:CDS | 45.0% |
| AGAGCAGAAACCATCTTGCG+AGG | + | chr4.4:9131440-9131459 | None:intergenic | 50.0% | |
| AGGACATTATGGACCTGGAG+TGG | - | chr4.4:9128591-9128610 | MS.gene28396:intron | 50.0% | |
| AGTGCTAGCAACACTCACTC+TGG | - | chr4.4:9130781-9130800 | MS.gene28396:CDS | 50.0% | |
| ATACTTCCCTAAAGGGTCCC+AGG | + | chr4.4:9128846-9128865 | None:intergenic | 50.0% | |
| CATGGGTATCCAACGTCTGA+AGG | + | chr4.4:9128802-9128821 | None:intergenic | 50.0% | |
| CCAGTCAAACTGGTCCATGA+TGG | + | chr4.4:9130308-9130327 | None:intergenic | 50.0% | |
| CCATCATGGACCAGTTTGAC+TGG | - | chr4.4:9130305-9130324 | MS.gene28396:CDS | 50.0% | |
| CCATGCACACTATGTTCAGG+GGG | - | chr4.4:9128817-9128836 | MS.gene28396:intron | 50.0% | |
| CCCATGCACACTATGTTCAG+GGG | - | chr4.4:9128816-9128835 | MS.gene28396:intron | 50.0% | |
| CCCCTGAACATAGTGTGCAT+GGG | + | chr4.4:9128819-9128838 | None:intergenic | 50.0% | |
| CTGGTTAGGTGAATACCTGC+AGG | + | chr4.4:9129186-9129205 | None:intergenic | 50.0% | |
| GATTGTTAGAGGCAGCCTAG+AGG | - | chr4.4:9130434-9130453 | MS.gene28396:CDS | 50.0% | |
| TCACAGGAAAGTGGACGAAG+TGG | - | chr4.4:9129601-9129620 | MS.gene28396:intron | 50.0% | |
| ! | CAGCATCATTGGCTGTCTGA+AGG | + | chr4.4:9131624-9131643 | None:intergenic | 50.0% |
| ! | GGCAATGCATCCTCTGAAAG+AGG | + | chr4.4:9131113-9131132 | None:intergenic | 50.0% |
| !! | ATCGACTTGATCGGGGTACA+AGG | + | chr4.4:9131032-9131051 | None:intergenic | 50.0% |
| ACTATGTTCAGGGGGTAGCC+TGG | - | chr4.4:9128825-9128844 | MS.gene28396:intron | 55.0% | |
| ACTGCACCAACACTCCCAGT+TGG | + | chr4.4:9131652-9131671 | None:intergenic | 55.0% | |
| CAACGGATACCGGCCAAACA+TGG | - | chr4.4:9127873-9127892 | MS.gene28396:intron | 55.0% | |
| CACCATCAGTAGACCACTCC+AGG | + | chr4.4:9128607-9128626 | None:intergenic | 55.0% | |
| CCCCCTGAACATAGTGTGCA+TGG | + | chr4.4:9128820-9128839 | None:intergenic | 55.0% | |
| CTATGTTCAGGGGGTAGCCT+GGG | - | chr4.4:9128826-9128845 | MS.gene28396:intron | 55.0% | |
| CTGGAGTGGTCTACTGATGG+TGG | - | chr4.4:9128605-9128624 | MS.gene28396:intron | 55.0% | |
| CTTGATGTCGAAATCGGCGC+CGG | + | chr4.4:9127356-9127375 | None:intergenic | 55.0% | |
| GACCTGGAGTGGTCTACTGA+TGG | - | chr4.4:9128602-9128621 | MS.gene28396:intron | 55.0% | |
| GCACACGGAAGCTGTATAGC+AGG | + | chr4.4:9130097-9130116 | None:intergenic | 55.0% | |
| GGATACCGGCCAAACATGGA+AGG | - | chr4.4:9127877-9127896 | MS.gene28396:intron | 55.0% | |
| TGTCCAGCTCCCAGTCAAAC+TGG | + | chr4.4:9130318-9130337 | None:intergenic | 55.0% | |
| ! | GTACTGCCAACTGGGAGTGT+TGG | - | chr4.4:9131643-9131662 | MS.gene28396:intron | 55.0% |
| CTGGGAGCTGGACACATGTC+TGG | - | chr4.4:9130324-9130343 | MS.gene28396:intron | 60.0% | |
| GGACCAGTTTGACTGGGAGC+TGG | - | chr4.4:9130312-9130331 | MS.gene28396:intron | 60.0% | |
| GGGTAGCCTGGGACCCTTTA+GGG | - | chr4.4:9128837-9128856 | MS.gene28396:intron | 60.0% | |
| !! | CGGCGCCGATTTCGACATCA+AGG | - | chr4.4:9127354-9127373 | MS.gene28396:intron | 60.0% |
| GGGGTAGCCTGGGACCCTTT+AGG | - | chr4.4:9128836-9128855 | MS.gene28396:intron | 65.0% | |
| GTGGCGAGAGTGGAGGAGAG+AGG | + | chr4.4:9127331-9127350 | None:intergenic | 65.0% | |
| ! | GATGTCGAAATCGGCGCCGG+CGG | + | chr4.4:9127353-9127372 | None:intergenic | 65.0% |
| TCCTCCACTCTCGCCACCGC+CGG | - | chr4.4:9127334-9127353 | MS.gene28396:intron | 70.0% | |
| !! | GTCGAAATCGGCGCCGGCGG+TGG | + | chr4.4:9127350-9127369 | None:intergenic | 75.0% |
| ! | GCCGGCGGTGGCGAGAGTGG+AGG | + | chr4.4:9127338-9127357 | None:intergenic | 80.0% |
| !!! | GGCGCCGGCGGTGGCGAGAG+TGG | + | chr4.4:9127341-9127360 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9127262 | 9132156 | 9127262 | ID=MS.gene28396 |
| chr4.4 | mRNA | 9127262 | 9132156 | 9127262 | ID=MS.gene28396.t1;Parent=MS.gene28396 |
| chr4.4 | exon | 9132043 | 9132156 | 9132043 | ID=MS.gene28396.t1.exon1;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9132043 | 9132156 | 9132043 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9131823 | 9131934 | 9131823 | ID=MS.gene28396.t1.exon2;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9131823 | 9131934 | 9131823 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9131687 | 9131713 | 9131687 | ID=MS.gene28396.t1.exon3;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9131687 | 9131713 | 9131687 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9131503 | 9131575 | 9131503 | ID=MS.gene28396.t1.exon4;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9131503 | 9131575 | 9131503 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9130735 | 9130838 | 9130735 | ID=MS.gene28396.t1.exon5;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9130735 | 9130838 | 9130735 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9130415 | 9130626 | 9130415 | ID=MS.gene28396.t1.exon6;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9130415 | 9130626 | 9130415 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9130229 | 9130325 | 9130229 | ID=MS.gene28396.t1.exon7;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9130229 | 9130325 | 9130229 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9129491 | 9129563 | 9129491 | ID=MS.gene28396.t1.exon8;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9129491 | 9129563 | 9129491 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9129237 | 9129325 | 9129237 | ID=MS.gene28396.t1.exon9;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9129237 | 9129325 | 9129237 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9128112 | 9128250 | 9128112 | ID=MS.gene28396.t1.exon10;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9128112 | 9128250 | 9128112 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9127910 | 9128010 | 9127910 | ID=MS.gene28396.t1.exon11;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9127910 | 9128010 | 9127910 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9127596 | 9127828 | 9127596 | ID=MS.gene28396.t1.exon12;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9127596 | 9127828 | 9127596 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| chr4.4 | exon | 9127262 | 9127333 | 9127262 | ID=MS.gene28396.t1.exon13;Parent=MS.gene28396.t1 |
| chr4.4 | CDS | 9127262 | 9127333 | 9127262 | ID=cds.MS.gene28396.t1;Parent=MS.gene28396.t1 |
| Gene Sequence |
| Protein sequence |
