Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000712.t1 | XP_013448512.1 | 98.9 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 1.30E-253 | 885.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000712.t1 | Q9SRT0 | 49.1 | 464 | 227 | 5 | 1 | 459 | 1 | 460 | 3.8e-108 | 393.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000712.t1 | A0A072TYF9 | 98.9 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 9.5e-254 | 885.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene61080 | MS.gene000712 | PPI |
MS.gene000712 | MS.gene016580 | PPI |
MS.gene88463 | MS.gene000712 | PPI |
MS.gene61746 | MS.gene000712 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000712.t1 | MTR_7g053260 | 98.911 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 0.0 | 931 |
MS.gene000712.t1 | MTR_7g116600 | 55.361 | 457 | 191 | 4 | 14 | 459 | 6 | 460 | 1.75e-163 | 469 |
MS.gene000712.t1 | MTR_1g079450 | 48.753 | 441 | 215 | 6 | 21 | 457 | 11 | 444 | 6.15e-124 | 368 |
MS.gene000712.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 89 | 481 | 7.50e-85 | 269 |
MS.gene000712.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 257 | 649 | 8.20e-83 | 268 |
MS.gene000712.t1 | MTR_4g063800 | 39.005 | 382 | 219 | 8 | 78 | 452 | 255 | 629 | 1.46e-79 | 260 |
MS.gene000712.t1 | MTR_1g094215 | 40.052 | 387 | 218 | 8 | 73 | 452 | 59 | 438 | 4.63e-76 | 245 |
MS.gene000712.t1 | MTR_1g094215 | 36.717 | 463 | 268 | 10 | 8 | 452 | 166 | 621 | 3.00e-74 | 245 |
MS.gene000712.t1 | MTR_7g078330 | 36.053 | 380 | 232 | 8 | 75 | 451 | 271 | 642 | 3.79e-64 | 219 |
MS.gene000712.t1 | MTR_7g059405 | 35.958 | 381 | 221 | 9 | 79 | 449 | 265 | 632 | 1.54e-63 | 217 |
MS.gene000712.t1 | MTR_5g083030 | 34.559 | 408 | 234 | 14 | 76 | 457 | 291 | 691 | 8.46e-57 | 199 |
MS.gene000712.t1 | MTR_2g018010 | 33.838 | 396 | 238 | 11 | 76 | 454 | 290 | 678 | 6.10e-54 | 192 |
MS.gene000712.t1 | MTR_4g028960 | 32.759 | 406 | 251 | 11 | 64 | 451 | 264 | 665 | 3.42e-46 | 170 |
MS.gene000712.t1 | MTR_4g107010 | 27.595 | 395 | 266 | 7 | 72 | 450 | 274 | 664 | 2.87e-39 | 151 |
MS.gene000712.t1 | MTR_3g078160 | 28.940 | 349 | 226 | 7 | 75 | 408 | 272 | 613 | 4.62e-39 | 150 |
MS.gene000712.t1 | MTR_3g078160 | 28.940 | 349 | 226 | 7 | 75 | 408 | 272 | 613 | 6.33e-39 | 149 |
MS.gene000712.t1 | MTR_5g034440 | 29.949 | 394 | 243 | 12 | 80 | 450 | 282 | 665 | 6.27e-37 | 144 |
MS.gene000712.t1 | MTR_1g018180 | 35.273 | 275 | 167 | 7 | 180 | 451 | 70 | 336 | 2.21e-35 | 134 |
MS.gene000712.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 555 | 825 | 4.93e-35 | 139 |
MS.gene000712.t1 | MTR_3g466220 | 39.216 | 153 | 76 | 4 | 7 | 156 | 173 | 311 | 2.47e-22 | 100 |
MS.gene000712.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 534 | 804 | 5.30e-35 | 139 |
MS.gene000712.t1 | MTR_3g466220 | 39.216 | 153 | 76 | 4 | 7 | 156 | 152 | 290 | 2.74e-22 | 100 |
MS.gene000712.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 309 | 592 | 5.61e-35 | 137 |
MS.gene000712.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 93 | 190 | 1.79e-21 | 97.8 |
MS.gene000712.t1 | MTR_1g069845 | 33.559 | 295 | 184 | 8 | 159 | 449 | 426 | 712 | 2.07e-34 | 137 |
MS.gene000712.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 210 | 307 | 3.00e-21 | 97.4 |
MS.gene000712.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 430 | 713 | 2.44e-34 | 136 |
MS.gene000712.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 214 | 311 | 2.81e-21 | 97.4 |
MS.gene000712.t1 | MTR_2g011140 | 29.155 | 367 | 218 | 14 | 80 | 435 | 17 | 352 | 1.06e-32 | 128 |
MS.gene000712.t1 | MTR_7g097020 | 33.893 | 298 | 188 | 7 | 154 | 449 | 464 | 754 | 5.69e-32 | 129 |
MS.gene000712.t1 | MTR_7g097020 | 36.691 | 139 | 78 | 3 | 14 | 152 | 187 | 315 | 1.03e-20 | 95.9 |
MS.gene000712.t1 | MTR_3g078160 | 30.370 | 270 | 171 | 5 | 75 | 333 | 272 | 535 | 3.32e-31 | 126 |
MS.gene000712.t1 | MTR_3g103050 | 31.900 | 279 | 185 | 4 | 175 | 451 | 55 | 330 | 1.69e-30 | 121 |
MS.gene000712.t1 | MTR_4g091880 | 27.970 | 404 | 228 | 15 | 78 | 452 | 5 | 374 | 4.46e-27 | 112 |
MS.gene000712.t1 | MTR_4g091880 | 25.385 | 390 | 228 | 12 | 78 | 452 | 5 | 346 | 1.19e-26 | 110 |
MS.gene000712.t1 | MTR_8g080280 | 24.724 | 453 | 258 | 15 | 66 | 446 | 264 | 705 | 1.40e-26 | 113 |
MS.gene000712.t1 | MTR_3g085610 | 23.380 | 432 | 258 | 12 | 79 | 446 | 281 | 703 | 2.72e-25 | 109 |
MS.gene000712.t1 | MTR_1g093965 | 29.707 | 239 | 115 | 6 | 91 | 329 | 1 | 186 | 5.76e-24 | 99.4 |
MS.gene000712.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 251 | 662 | 3.51e-23 | 103 |
MS.gene000712.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 266 | 677 | 5.82e-23 | 102 |
MS.gene000712.t1 | MTR_3g078340 | 29.032 | 279 | 187 | 6 | 175 | 449 | 214 | 485 | 1.02e-22 | 101 |
MS.gene000712.t1 | MTR_1g093995 | 29.289 | 239 | 116 | 6 | 91 | 329 | 1 | 186 | 1.32e-22 | 95.5 |
MS.gene000712.t1 | MTR_4g085720 | 26.087 | 391 | 267 | 10 | 72 | 449 | 8 | 389 | 2.53e-22 | 99.0 |
MS.gene000712.t1 | MTR_2g026130 | 30.496 | 282 | 183 | 8 | 173 | 450 | 177 | 449 | 9.02e-21 | 95.1 |
MS.gene000712.t1 | MTR_5g048050 | 36.885 | 122 | 62 | 2 | 73 | 179 | 20 | 141 | 2.60e-20 | 93.2 |
MS.gene000712.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 273 | 351 | 3.97e-20 | 94.0 |
MS.gene000712.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 161 | 239 | 4.72e-20 | 93.6 |
MS.gene000712.t1 | MTR_5g015210 | 25.816 | 337 | 226 | 10 | 79 | 407 | 68 | 388 | 8.85e-20 | 92.0 |
MS.gene000712.t1 | MTR_3g065080 | 52.174 | 69 | 33 | 0 | 76 | 144 | 34 | 102 | 1.02e-19 | 91.7 |
MS.gene000712.t1 | MTR_6g071340 | 36.134 | 119 | 61 | 2 | 76 | 179 | 3 | 121 | 1.44e-19 | 90.9 |
MS.gene000712.t1 | MTR_8g092870 | 25.628 | 398 | 269 | 10 | 76 | 452 | 8 | 399 | 1.55e-18 | 87.8 |
MS.gene000712.t1 | MTR_3g096370 | 44.595 | 74 | 41 | 0 | 71 | 144 | 3 | 76 | 4.51e-18 | 86.3 |
MS.gene000712.t1 | MTR_1g017770 | 27.727 | 220 | 141 | 5 | 79 | 294 | 46 | 251 | 1.63e-17 | 84.7 |
MS.gene000712.t1 | MTR_7g117890 | 29.224 | 219 | 126 | 8 | 82 | 296 | 259 | 452 | 3.03e-17 | 85.1 |
MS.gene000712.t1 | MTR_6g008170 | 27.354 | 223 | 158 | 3 | 226 | 446 | 289 | 509 | 1.51e-16 | 82.4 |
MS.gene000712.t1 | MTR_5g077510 | 42.029 | 69 | 40 | 0 | 76 | 144 | 33 | 101 | 2.09e-16 | 81.6 |
MS.gene000712.t1 | MTR_1g056880 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 2.45e-16 | 81.3 |
MS.gene000712.t1 | MTR_7g106340 | 47.561 | 82 | 37 | 3 | 76 | 151 | 6 | 87 | 4.23e-16 | 80.5 |
MS.gene000712.t1 | MTR_1g056840 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 6.42e-16 | 79.7 |
MS.gene000712.t1 | MTR_1g056870 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 7.12e-16 | 79.7 |
MS.gene000712.t1 | MTR_3g095730 | 44.286 | 70 | 39 | 0 | 76 | 145 | 11 | 80 | 7.34e-16 | 79.7 |
MS.gene000712.t1 | MTR_3g115670 | 25.649 | 308 | 193 | 10 | 62 | 337 | 14 | 317 | 4.76e-15 | 78.2 |
MS.gene000712.t1 | MTR_8g027140 | 24.260 | 338 | 223 | 10 | 82 | 391 | 263 | 595 | 3.48e-14 | 75.5 |
MS.gene000712.t1 | MTR_4g051515 | 26.010 | 396 | 218 | 17 | 76 | 404 | 4 | 391 | 1.78e-13 | 72.4 |
MS.gene000712.t1 | MTR_2g087350 | 43.836 | 73 | 37 | 2 | 76 | 144 | 4 | 76 | 2.42e-13 | 72.0 |
MS.gene000712.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 514 | 592 | 2.83e-13 | 72.8 |
MS.gene000712.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 516 | 594 | 2.91e-13 | 72.8 |
MS.gene000712.t1 | MTR_5g032010 | 40.909 | 66 | 39 | 0 | 79 | 144 | 733 | 798 | 1.47e-12 | 70.5 |
MS.gene000712.t1 | MTR_7g077780 | 35.632 | 87 | 56 | 0 | 58 | 144 | 806 | 892 | 1.94e-12 | 70.1 |
MS.gene000712.t1 | MTR_1g056910 | 47.059 | 68 | 34 | 2 | 79 | 144 | 7 | 74 | 3.16e-12 | 68.6 |
MS.gene000712.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 6.53e-12 | 68.6 |
MS.gene000712.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 6.54e-12 | 68.6 |
MS.gene000712.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 590 | 655 | 7.98e-12 | 67.8 |
MS.gene000712.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 741 | 806 | 9.37e-12 | 67.8 |
MS.gene000712.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 647 | 714 | 3.61e-11 | 65.9 |
MS.gene000712.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 649 | 716 | 3.68e-11 | 65.9 |
MS.gene000712.t1 | MTR_8g103227 | 40.580 | 69 | 40 | 1 | 77 | 144 | 394 | 462 | 3.93e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000712.t1 | AT3G07360 | 57.759 | 464 | 187 | 5 | 1 | 459 | 1 | 460 | 0.0 | 519 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 3.33e-124 | 364 |
MS.gene000712.t1 | AT5G18320 | 42.763 | 456 | 221 | 12 | 21 | 453 | 12 | 450 | 2.75e-99 | 305 |
MS.gene000712.t1 | AT1G23030 | 38.718 | 390 | 226 | 8 | 66 | 451 | 229 | 609 | 1.81e-80 | 261 |
MS.gene000712.t1 | AT3G54850 | 36.575 | 473 | 272 | 11 | 6 | 458 | 165 | 629 | 4.31e-80 | 261 |
MS.gene000712.t1 | AT5G18340 | 38.681 | 455 | 235 | 14 | 19 | 447 | 16 | 452 | 1.19e-79 | 254 |
MS.gene000712.t1 | AT3G46510 | 38.155 | 401 | 231 | 9 | 59 | 452 | 240 | 630 | 9.99e-77 | 252 |
MS.gene000712.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 77 | 472 | 1.41e-76 | 247 |
MS.gene000712.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 225 | 620 | 6.93e-75 | 247 |
MS.gene000712.t1 | AT2G28830 | 38.120 | 383 | 222 | 7 | 79 | 451 | 185 | 562 | 3.48e-74 | 244 |
MS.gene000712.t1 | AT5G18330 | 37.018 | 389 | 226 | 7 | 76 | 451 | 63 | 445 | 2.59e-65 | 217 |
MS.gene000712.t1 | AT5G42340 | 34.961 | 389 | 234 | 10 | 72 | 451 | 278 | 656 | 2.73e-58 | 203 |
MS.gene000712.t1 | AT5G01830 | 29.130 | 460 | 285 | 15 | 12 | 451 | 207 | 645 | 3.99e-45 | 167 |
MS.gene000712.t1 | AT1G29340 | 31.486 | 397 | 239 | 13 | 76 | 451 | 303 | 687 | 7.05e-43 | 161 |
MS.gene000712.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.46e-39 | 150 |
MS.gene000712.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.54e-19 | 89.7 |
MS.gene000712.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.46e-39 | 150 |
MS.gene000712.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.54e-19 | 89.7 |
MS.gene000712.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 549 | 815 | 6.01e-39 | 150 |
MS.gene000712.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 236 | 307 | 9.77e-19 | 89.7 |
MS.gene000712.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.81e-39 | 150 |
MS.gene000712.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 233 | 304 | 1.04e-18 | 89.7 |
MS.gene000712.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.81e-39 | 150 |
MS.gene000712.t1 | AT2G23140 | 48.611 | 72 | 37 | 0 | 81 | 152 | 233 | 304 | 1.04e-18 | 89.7 |
MS.gene000712.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 6.04e-38 | 147 |
MS.gene000712.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 6.04e-38 | 147 |
MS.gene000712.t1 | AT3G01400 | 33.562 | 292 | 184 | 7 | 170 | 459 | 65 | 348 | 1.66e-35 | 135 |
MS.gene000712.t1 | AT4G21350 | 30.347 | 346 | 227 | 9 | 78 | 420 | 5 | 339 | 5.19e-33 | 129 |
MS.gene000712.t1 | AT5G58680 | 34.545 | 275 | 170 | 7 | 180 | 451 | 72 | 339 | 5.13e-31 | 123 |
MS.gene000712.t1 | AT1G60190 | 27.089 | 395 | 253 | 14 | 80 | 450 | 280 | 663 | 6.18e-30 | 123 |
MS.gene000712.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 495 | 708 | 8.93e-28 | 117 |
MS.gene000712.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 194 | 268 | 1.12e-20 | 95.5 |
MS.gene000712.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 1.09e-27 | 117 |
MS.gene000712.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.51e-20 | 95.1 |
MS.gene000712.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 1.09e-27 | 117 |
MS.gene000712.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.51e-20 | 95.1 |
MS.gene000712.t1 | AT3G19380 | 28.056 | 360 | 222 | 14 | 72 | 407 | 8 | 354 | 1.25e-27 | 114 |
MS.gene000712.t1 | AT1G10560 | 26.718 | 393 | 258 | 14 | 80 | 450 | 290 | 674 | 7.26e-27 | 114 |
MS.gene000712.t1 | AT1G49780 | 26.303 | 403 | 262 | 11 | 72 | 450 | 8 | 399 | 1.35e-25 | 108 |
MS.gene000712.t1 | AT1G27910 | 27.113 | 284 | 147 | 9 | 79 | 307 | 280 | 558 | 1.32e-23 | 104 |
MS.gene000712.t1 | AT5G40140 | 27.477 | 222 | 158 | 2 | 231 | 450 | 286 | 506 | 5.06e-22 | 99.4 |
MS.gene000712.t1 | AT1G66160 | 53.623 | 69 | 32 | 0 | 76 | 144 | 31 | 99 | 4.34e-21 | 95.5 |
MS.gene000712.t1 | AT5G37490 | 48.148 | 81 | 42 | 0 | 76 | 156 | 29 | 109 | 1.31e-20 | 94.4 |
MS.gene000712.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.91e-19 | 92.0 |
MS.gene000712.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.91e-19 | 92.0 |
MS.gene000712.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 1.94e-19 | 91.3 |
MS.gene000712.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.25e-19 | 91.7 |
MS.gene000712.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.25e-19 | 91.7 |
MS.gene000712.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.25e-19 | 91.7 |
MS.gene000712.t1 | AT5G62560 | 29.091 | 220 | 150 | 4 | 231 | 446 | 292 | 509 | 2.62e-19 | 90.9 |
MS.gene000712.t1 | AT4G16490 | 31.206 | 282 | 183 | 8 | 173 | 450 | 187 | 461 | 3.52e-19 | 90.1 |
MS.gene000712.t1 | AT5G65200 | 26.882 | 279 | 186 | 6 | 180 | 447 | 235 | 506 | 2.10e-18 | 88.2 |
MS.gene000712.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.62e-18 | 87.0 |
MS.gene000712.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.62e-18 | 87.0 |
MS.gene000712.t1 | AT2G35930 | 25.357 | 280 | 197 | 6 | 72 | 345 | 6 | 279 | 8.68e-18 | 85.5 |
MS.gene000712.t1 | AT5G64660 | 45.714 | 70 | 38 | 0 | 76 | 145 | 8 | 77 | 2.21e-17 | 84.3 |
MS.gene000712.t1 | AT3G18710 | 45.946 | 74 | 40 | 0 | 76 | 149 | 10 | 83 | 4.10e-17 | 83.6 |
MS.gene000712.t1 | AT3G52450 | 44.595 | 74 | 40 | 1 | 72 | 144 | 1 | 74 | 5.54e-17 | 83.2 |
MS.gene000712.t1 | AT3G47820 | 26.838 | 272 | 186 | 7 | 185 | 449 | 221 | 486 | 8.10e-17 | 83.2 |
MS.gene000712.t1 | AT5G09800 | 46.377 | 69 | 37 | 0 | 77 | 145 | 10 | 78 | 8.65e-16 | 79.3 |
MS.gene000712.t1 | AT4G36550 | 42.308 | 78 | 45 | 0 | 75 | 152 | 216 | 293 | 1.17e-15 | 80.1 |
MS.gene000712.t1 | AT3G49810 | 24.601 | 313 | 181 | 8 | 78 | 387 | 64 | 324 | 8.94e-15 | 76.6 |
MS.gene000712.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 9.63e-14 | 74.3 |
MS.gene000712.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 9.63e-14 | 74.3 |
MS.gene000712.t1 | AT1G01680 | 43.077 | 65 | 37 | 0 | 80 | 144 | 235 | 299 | 5.27e-13 | 70.1 |
MS.gene000712.t1 | AT5G57035 | 35.000 | 100 | 65 | 0 | 58 | 157 | 688 | 787 | 7.70e-13 | 71.2 |
MS.gene000712.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 499 | 564 | 8.86e-13 | 70.9 |
MS.gene000712.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 498 | 563 | 9.33e-13 | 70.9 |
MS.gene000712.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.67e-12 | 70.1 |
MS.gene000712.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.67e-12 | 70.1 |
MS.gene000712.t1 | AT2G45920 | 30.952 | 126 | 71 | 2 | 28 | 144 | 273 | 391 | 2.79e-12 | 68.6 |
MS.gene000712.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 7.12e-12 | 68.2 |
MS.gene000712.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 7.12e-12 | 68.2 |
MS.gene000712.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 7.12e-12 | 68.2 |
MS.gene000712.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 279 | 344 | 9.11e-12 | 67.0 |
MS.gene000712.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 354 | 419 | 1.13e-11 | 67.0 |
MS.gene000712.t1 | AT3G11840 | 44.286 | 70 | 37 | 2 | 76 | 144 | 8 | 76 | 1.39e-11 | 66.6 |
MS.gene000712.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 716 | 781 | 1.45e-11 | 67.4 |
MS.gene000712.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 724 | 789 | 1.47e-11 | 67.4 |
MS.gene000712.t1 | AT1G56040 | 41.538 | 65 | 38 | 0 | 79 | 143 | 354 | 418 | 3.80e-11 | 65.1 |
MS.gene000712.t1 | AT1G56030 | 41.538 | 65 | 38 | 0 | 79 | 143 | 324 | 388 | 5.45e-11 | 64.7 |
MS.gene000712.t1 | AT1G01670 | 27.972 | 143 | 91 | 2 | 12 | 144 | 136 | 276 | 8.52e-11 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTATCATTTCCCTTATA+AGG | 0.199602 | 7.1:-48887340 | None:intergenic |
TTACTCCAAATCACCTTATA+AGG | 0.206871 | 7.1:+48887327 | MS.gene000712:CDS |
GATCCTGTCATTGTTGCTTC+TGG | 0.279652 | 7.1:+48886011 | MS.gene000712:CDS |
CAACTCCTTCTTCAACTCTA+AGG | 0.282213 | 7.1:-48885787 | None:intergenic |
ATACTATCTCCTTCACAAAT+TGG | 0.282392 | 7.1:-48887593 | None:intergenic |
ATTTCCCTTATAAGGTGATT+TGG | 0.303420 | 7.1:-48887332 | None:intergenic |
TCACATCTTCTTGAAGTTCA+TGG | 0.317630 | 7.1:-48887619 | None:intergenic |
GACTCAAACAAAGAGCTTAT+AGG | 0.319038 | 7.1:+48887797 | MS.gene000712:CDS |
GATGGTTTAATGCTGGAAAT+AGG | 0.321814 | 7.1:+48887264 | MS.gene000712:CDS |
AGTGGACATTTGAATTCATC+TGG | 0.326095 | 7.1:-48885969 | None:intergenic |
AAAACCACTTATCGACCTAT+TGG | 0.362631 | 7.1:+48887835 | MS.gene000712:CDS |
ATCCAAGTTGAGGGAAATAA+AGG | 0.367050 | 7.1:+48888168 | MS.gene000712:CDS |
CAAATTGGCTTAAGCAATTG+AGG | 0.379491 | 7.1:-48887578 | None:intergenic |
AGGGATTCCCTTCTTCCAAT+AGG | 0.395833 | 7.1:-48887850 | None:intergenic |
TTCCTTTATTTCCCTCAACT+TGG | 0.403611 | 7.1:-48888170 | None:intergenic |
CTCCAAGCTCTGCCATTTCA+AGG | 0.408039 | 7.1:-48888048 | None:intergenic |
TGTCATTGTTGCTTCTGGTC+AGG | 0.408833 | 7.1:+48886016 | MS.gene000712:CDS |
CATAAAGACATATAGTTTGA+AGG | 0.418853 | 7.1:-48888141 | None:intergenic |
GAGCTCGTGTGAACGCAATA+AGG | 0.419696 | 7.1:+48888102 | MS.gene000712:CDS |
ATTCAAAGATGGTTTAATGC+TGG | 0.420712 | 7.1:+48887257 | MS.gene000712:CDS |
CTCAATGCCTTCATGAGGAT+TGG | 0.426057 | 7.1:-48887713 | None:intergenic |
CGCATAATGCTTAGCAAACA+AGG | 0.449211 | 7.1:-48888076 | None:intergenic |
CTAGTGCTGATAACGTGAAA+AGG | 0.450231 | 7.1:-48887775 | None:intergenic |
AGTTGAAGAAGGAGTTGAAG+AGG | 0.452412 | 7.1:+48885793 | MS.gene000712:CDS |
AGGATCTCTCATAAATTCCT+TGG | 0.453978 | 7.1:-48885994 | None:intergenic |
ATTAGTTACATTAGTGATGA+AGG | 0.459084 | 7.1:+48887401 | MS.gene000712:CDS |
GAAAAGGGTTGCTGCAGCAT+TGG | 0.459856 | 7.1:-48887759 | None:intergenic |
TCAGAAGGCTGTCCTTGAAA+TGG | 0.461901 | 7.1:+48888036 | MS.gene000712:CDS |
GTCCTTGAAATGGCAGAGCT+TGG | 0.465269 | 7.1:+48888046 | MS.gene000712:CDS |
TACTCCAAATCACCTTATAA+GGG | 0.467565 | 7.1:+48887328 | MS.gene000712:CDS |
ATGAGGATTGGAATTACCAT+TGG | 0.468277 | 7.1:-48887701 | None:intergenic |
TTAAACCATCTTTGAATGAA+AGG | 0.473997 | 7.1:-48887251 | None:intergenic |
ATAGACCTTTCATTCAAAGA+TGG | 0.475990 | 7.1:+48887246 | MS.gene000712:CDS |
GCTTTCTTCAACATAACCTC+TGG | 0.479400 | 7.1:-48885765 | None:intergenic |
CTCATAAATTCCTTGGAAAG+TGG | 0.479852 | 7.1:-48885987 | None:intergenic |
GAGAGAACTTGATGAGTTTG+AGG | 0.482799 | 7.1:-48887293 | None:intergenic |
CCTTCTGATGAGTCGAAAGT+AGG | 0.486238 | 7.1:-48888021 | None:intergenic |
AGCAACATCCTTCATAGCTA+AGG | 0.487743 | 7.1:-48887870 | None:intergenic |
AGGGAATCCCTTAGCTATGA+AGG | 0.488930 | 7.1:+48887862 | MS.gene000712:CDS |
ATCATAAACATGGCAAAACC+AGG | 0.492884 | 7.1:+48885726 | None:intergenic |
GAAAGCCTTAGAGTTGAAGA+AGG | 0.502406 | 7.1:+48885782 | MS.gene000712:CDS |
GTGATTCGTCGACGTGAACT+CGG | 0.504524 | 7.1:-48887985 | None:intergenic |
TGTCATGAATCGAGATATTG+AGG | 0.522241 | 7.1:-48887652 | None:intergenic |
ATTCAAATGTCCACTTTCCA+AGG | 0.523076 | 7.1:+48885977 | MS.gene000712:CDS |
CTTATCGACCTATTGGAAGA+AGG | 0.525172 | 7.1:+48887842 | MS.gene000712:CDS |
GTTGAGGGAAATAAAGGAAG+AGG | 0.528465 | 7.1:+48888174 | MS.gene000712:CDS |
TCTTCCAATAGGTCGATAAG+TGG | 0.532091 | 7.1:-48887839 | None:intergenic |
GATTTGGAGTAAGCAGAGTG+TGG | 0.532624 | 7.1:-48887316 | None:intergenic |
TAGTGCTGATAACGTGAAAA+GGG | 0.532860 | 7.1:-48887774 | None:intergenic |
TGACCAGAAGCAACAATGAC+AGG | 0.534069 | 7.1:-48886014 | None:intergenic |
TTATGATAGATCCAAGTTGA+GGG | 0.541455 | 7.1:+48888159 | MS.gene000712:CDS |
ATTTGGAGTAAGCAGAGTGT+GGG | 0.550004 | 7.1:-48887315 | None:intergenic |
AATTCTTGAGAGATTGCATA+GGG | 0.552673 | 7.1:+48888267 | MS.gene000712:CDS |
CTTCTGATGAGTCGAAAGTA+GGG | 0.555075 | 7.1:-48888020 | None:intergenic |
TTTATGATAGATCCAAGTTG+AGG | 0.556104 | 7.1:+48888158 | MS.gene000712:CDS |
TGGTGCGGTTAGAGTGATCA+TGG | 0.556470 | 7.1:+48887949 | MS.gene000712:CDS |
TTGCTTAAGCCAATTTGTGA+AGG | 0.557316 | 7.1:+48887584 | MS.gene000712:CDS |
TTATCGACCTATTGGAAGAA+GGG | 0.563909 | 7.1:+48887843 | MS.gene000712:CDS |
GGTAATTCCAATCCTCATGA+AGG | 0.566880 | 7.1:+48887706 | MS.gene000712:CDS |
GCAACATCCTTCATAGCTAA+GGG | 0.568346 | 7.1:-48887869 | None:intergenic |
GGATCAGAATCTAACACCCC+TGG | 0.581678 | 7.1:-48885744 | None:intergenic |
GTGGACATTTGAATTCATCT+GGG | 0.582625 | 7.1:-48885968 | None:intergenic |
CCTACTTTCGACTCATCAGA+AGG | 0.583772 | 7.1:+48888021 | MS.gene000712:CDS |
AAAGCAATAGCAGTGAAAGA+TGG | 0.587061 | 7.1:+48887929 | MS.gene000712:CDS |
CTCATGAAGGCATTGAGATG+TGG | 0.589595 | 7.1:+48887719 | MS.gene000712:CDS |
TATATCTTCATCATCAACAA+TGG | 0.590547 | 7.1:-48885826 | None:intergenic |
CACATCTCAATGCCTTCATG+AGG | 0.603776 | 7.1:-48887718 | None:intergenic |
GAATTCTTGAGAGATTGCAT+AGG | 0.617412 | 7.1:+48888266 | MS.gene000712:CDS |
ACAAGTGGCTGAAATTCCAA+TGG | 0.623306 | 7.1:+48887685 | MS.gene000712:CDS |
ATGTGGAACAATTGAAACAC+GGG | 0.623866 | 7.1:+48887736 | MS.gene000712:CDS |
GGTGTTAGATTCTGATCCAG+AGG | 0.628475 | 7.1:+48885749 | MS.gene000712:CDS |
TCATAAACATGGCAAAACCA+GGG | 0.631769 | 7.1:+48885727 | None:intergenic |
TGACAACAACAAGAAACAAG+TGG | 0.636281 | 7.1:+48887670 | MS.gene000712:CDS |
AGGGCTAAGAGAAAAGCTAG+TGG | 0.642044 | 7.1:+48888244 | MS.gene000712:CDS |
GATGAGTCGAAAGTAGGGCA+AGG | 0.653116 | 7.1:-48888015 | None:intergenic |
CATAAACATGGCAAAACCAG+GGG | 0.671437 | 7.1:+48885728 | None:intergenic |
GATGTGGAACAATTGAAACA+CGG | 0.678187 | 7.1:+48887735 | MS.gene000712:CDS |
AATAGCAGTGAAAGATGGTG+CGG | 0.683543 | 7.1:+48887934 | MS.gene000712:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGAATTAAAATTAACTAA+AGG | + | chr7.1:48886305-48886324 | MS.gene000712:intron | 10.0% |
!! | TATATAAATAAATTCAGAAA+AGG | - | chr7.1:48886654-48886673 | None:intergenic | 10.0% |
!! | TTGAATTAAAATTAACTAAA+GGG | + | chr7.1:48886306-48886325 | MS.gene000712:intron | 10.0% |
!! | TATAGAAATATACATTTCTA+AGG | - | chr7.1:48886478-48886497 | None:intergenic | 15.0% |
!! | TTAATGAATTATCATACATT+AGG | + | chr7.1:48886224-48886243 | MS.gene000712:intron | 15.0% |
!!! | AAGGAAAAAAAAATCTATTT+TGG | - | chr7.1:48886558-48886577 | None:intergenic | 15.0% |
!!! | AATGATGATTTAAAACAAAT+TGG | + | chr7.1:48886961-48886980 | MS.gene000712:intron | 15.0% |
!!! | TTTATATTGTTTACCTTTTA+TGG | + | chr7.1:48887009-48887028 | MS.gene000712:intron | 15.0% |
!! | AAAAATGGTCTAAAAATCAA+GGG | + | chr7.1:48887360-48887379 | MS.gene000712:CDS | 20.0% |
!! | ATAAAAAATCCATTTCTGTT+AGG | - | chr7.1:48886269-48886288 | None:intergenic | 20.0% |
!! | ATTATTAGTGAGAAAAATGT+TGG | + | chr7.1:48886104-48886123 | MS.gene000712:intron | 20.0% |
!! | TATCATACATTAGGAAAAAT+GGG | + | chr7.1:48886233-48886252 | MS.gene000712:intron | 20.0% |
!! | TATCATGTATTAACCATAAA+AGG | - | chr7.1:48887025-48887044 | None:intergenic | 20.0% |
!! | TCTAATAATCACAAATTGTT+CGG | + | chr7.1:48887058-48887077 | MS.gene000712:intron | 20.0% |
!! | TTATCATACATTAGGAAAAA+TGG | + | chr7.1:48886232-48886251 | MS.gene000712:intron | 20.0% |
!!! | ATACATGATATTTTAACAAG+TGG | + | chr7.1:48887035-48887054 | MS.gene000712:intron | 20.0% |
!!! | GACTTTTTATGTAAATATCT+AGG | + | chr7.1:48886183-48886202 | MS.gene000712:intron | 20.0% |
!!! | TGTTTTTTTTACTTAACCAT+CGG | - | chr7.1:48887185-48887204 | None:intergenic | 20.0% |
! | ATATATAATGTGTGTGTAGA+TGG | + | chr7.1:48886671-48886690 | MS.gene000712:intron | 25.0% |
! | ATTAAACAACAAAAACAGGA+AGG | - | chr7.1:48886577-48886596 | None:intergenic | 25.0% |
! | ATTAGTTACATTAGTGATGA+AGG | + | chr7.1:48887401-48887420 | MS.gene000712:CDS | 25.0% |
! | CATAAAGACATATAGTTTGA+AGG | - | chr7.1:48888144-48888163 | None:intergenic | 25.0% |
! | CTAATAATCACAAATTGTTC+GGG | + | chr7.1:48887059-48887078 | MS.gene000712:intron | 25.0% |
! | CTATAAGTCATTTCATTGTT+TGG | + | chr7.1:48886493-48886512 | MS.gene000712:intron | 25.0% |
! | GAAAAATGGTCTAAAAATCA+AGG | + | chr7.1:48887359-48887378 | MS.gene000712:CDS | 25.0% |
! | TAAAATGTTCCTAACAGAAA+TGG | + | chr7.1:48886257-48886276 | MS.gene000712:intron | 25.0% |
! | TAAGGGAAATGATAGAAAAA+TGG | + | chr7.1:48887345-48887364 | MS.gene000712:CDS | 25.0% |
! | TATATCTTCATCATCAACAA+TGG | - | chr7.1:48885829-48885848 | None:intergenic | 25.0% |
! | TTAAACCATCTTTGAATGAA+AGG | - | chr7.1:48887254-48887273 | None:intergenic | 25.0% |
! | TTGGTACTTTATTCTATGTT+TGG | + | chr7.1:48886391-48886410 | MS.gene000712:intron | 25.0% |
! | TTTCTATCATTTCCCTTATA+AGG | - | chr7.1:48887343-48887362 | None:intergenic | 25.0% |
!! | AAACAAATTGGAGATTTTTC+TGG | + | chr7.1:48886973-48886992 | MS.gene000712:intron | 25.0% |
!! | AAGGCATCAATGTTAAAATT+GGG | - | chr7.1:48886858-48886877 | None:intergenic | 25.0% |
!! | ACAATACATGACATTTTTGT+TGG | + | chr7.1:48887202-48887221 | MS.gene000712:intron | 25.0% |
!!! | GATATGTAAGATATTGATTC+TGG | + | chr7.1:48886334-48886353 | MS.gene000712:intron | 25.0% |
!!! | GTTTTTTTTACTTAACCATC+GGG | - | chr7.1:48887184-48887203 | None:intergenic | 25.0% |
!!! | TAAGATATTGATTCTGGTTT+TGG | + | chr7.1:48886340-48886359 | MS.gene000712:intron | 25.0% |
!!! | TTTGACTGATTTTCTCAAAA+GGG | + | chr7.1:48886793-48886812 | MS.gene000712:intron | 25.0% |
!!! | TTTTGACTGATTTTCTCAAA+AGG | + | chr7.1:48886792-48886811 | MS.gene000712:intron | 25.0% |
!!! | TTTTTGTTTATCTCTTTTGC+TGG | + | chr7.1:48886364-48886383 | MS.gene000712:intron | 25.0% |
AATTCTTGAGAGATTGCATA+GGG | + | chr7.1:48888267-48888286 | MS.gene000712:CDS | 30.0% | |
ATACTATCTCCTTCACAAAT+TGG | - | chr7.1:48887596-48887615 | None:intergenic | 30.0% | |
ATAGACCTTTCATTCAAAGA+TGG | + | chr7.1:48887246-48887265 | MS.gene000712:CDS | 30.0% | |
ATTCAAAGATGGTTTAATGC+TGG | + | chr7.1:48887257-48887276 | MS.gene000712:CDS | 30.0% | |
ATTTCCCTTATAAGGTGATT+TGG | - | chr7.1:48887335-48887354 | None:intergenic | 30.0% | |
ATTTCTGAACTTGCAAAAAG+TGG | + | chr7.1:48888214-48888233 | MS.gene000712:CDS | 30.0% | |
CAATGTTAAAATTGGGAGAA+AGG | - | chr7.1:48886851-48886870 | None:intergenic | 30.0% | |
GAGCATTAAACAACAAAAAC+AGG | - | chr7.1:48886581-48886600 | None:intergenic | 30.0% | |
TACTCCAAATCACCTTATAA+GGG | + | chr7.1:48887328-48887347 | MS.gene000712:CDS | 30.0% | |
TTACTCCAAATCACCTTATA+AGG | + | chr7.1:48887327-48887346 | MS.gene000712:CDS | 30.0% | |
TTTATGATAGATCCAAGTTG+AGG | + | chr7.1:48888158-48888177 | MS.gene000712:CDS | 30.0% | |
! | GAGAAAAGAAAAGGTAGTTT+TGG | - | chr7.1:48886886-48886905 | None:intergenic | 30.0% |
! | TATCTCTTTTGCTGGAATTT+TGG | + | chr7.1:48886372-48886391 | MS.gene000712:intron | 30.0% |
! | TTATGATAGATCCAAGTTGA+GGG | + | chr7.1:48888159-48888178 | MS.gene000712:CDS | 30.0% |
!! | CAAAAAAGTACTCGAAAACA+AGG | - | chr7.1:48887539-48887558 | None:intergenic | 30.0% |
!! | CTGGTAATCCAAAGTTTTAT+CGG | - | chr7.1:48887141-48887160 | None:intergenic | 30.0% |
!! | GAAGGCATCAATGTTAAAAT+TGG | - | chr7.1:48886859-48886878 | None:intergenic | 30.0% |
!!! | AAAAGAAAAGGTAGTTTTGG+TGG | - | chr7.1:48886883-48886902 | None:intergenic | 30.0% |
!!! | AAAGAAAAGGTAGTTTTGGT+GGG | - | chr7.1:48886882-48886901 | None:intergenic | 30.0% |
AAAACCACTTATCGACCTAT+TGG | + | chr7.1:48887835-48887854 | MS.gene000712:CDS | 35.0% | |
AAAGCAATAGCAGTGAAAGA+TGG | + | chr7.1:48887929-48887948 | MS.gene000712:CDS | 35.0% | |
AACTCGAGTTTGAATCTTGA+TGG | + | chr7.1:48887084-48887103 | MS.gene000712:intron | 35.0% | |
AATAGTTCTTGGTCTGACTA+TGG | + | chr7.1:48887108-48887127 | MS.gene000712:intron | 35.0% | |
ACTCGAGTTTGAATCTTGAT+GGG | + | chr7.1:48887085-48887104 | MS.gene000712:intron | 35.0% | |
AGGATCTCTCATAAATTCCT+TGG | - | chr7.1:48885997-48886016 | None:intergenic | 35.0% | |
AGGTGTGGTAAAGATAGAAA+AGG | + | chr7.1:48886423-48886442 | MS.gene000712:intron | 35.0% | |
AGTGAGACAGAGAAAAGAAA+AGG | - | chr7.1:48886895-48886914 | None:intergenic | 35.0% | |
AGTGGACATTTGAATTCATC+TGG | - | chr7.1:48885972-48885991 | None:intergenic | 35.0% | |
ATCTTGATGGGAATAGTTCT+TGG | + | chr7.1:48887097-48887116 | MS.gene000712:intron | 35.0% | |
ATGAGGATTGGAATTACCAT+TGG | - | chr7.1:48887704-48887723 | None:intergenic | 35.0% | |
ATGTGGAACAATTGAAACAC+GGG | + | chr7.1:48887736-48887755 | MS.gene000712:CDS | 35.0% | |
ATTCAAATGTCCACTTTCCA+AGG | + | chr7.1:48885977-48885996 | MS.gene000712:CDS | 35.0% | |
CTATCTTTACCACACCTTTA+TGG | - | chr7.1:48886420-48886439 | None:intergenic | 35.0% | |
CTCATAAATTCCTTGGAAAG+TGG | - | chr7.1:48885990-48886009 | None:intergenic | 35.0% | |
GAATTCTTGAGAGATTGCAT+AGG | + | chr7.1:48888266-48888285 | MS.gene000712:CDS | 35.0% | |
GACTCAAACAAAGAGCTTAT+AGG | + | chr7.1:48887797-48887816 | MS.gene000712:CDS | 35.0% | |
GATGGTTTAATGCTGGAAAT+AGG | + | chr7.1:48887264-48887283 | MS.gene000712:CDS | 35.0% | |
GATGTGGAACAATTGAAACA+CGG | + | chr7.1:48887735-48887754 | MS.gene000712:CDS | 35.0% | |
GTGGACATTTGAATTCATCT+GGG | - | chr7.1:48885971-48885990 | None:intergenic | 35.0% | |
TAGATGGAAAGAGAAAGAGT+GGG | + | chr7.1:48886687-48886706 | MS.gene000712:intron | 35.0% | |
TCACATCTTCTTGAAGTTCA+TGG | - | chr7.1:48887622-48887641 | None:intergenic | 35.0% | |
TGACAACAACAAGAAACAAG+TGG | + | chr7.1:48887670-48887689 | MS.gene000712:CDS | 35.0% | |
TGCAAAAAGTGGAACTTCAA+GGG | + | chr7.1:48888225-48888244 | MS.gene000712:CDS | 35.0% | |
TGTCATGAATCGAGATATTG+AGG | - | chr7.1:48887655-48887674 | None:intergenic | 35.0% | |
TTATCGACCTATTGGAAGAA+GGG | + | chr7.1:48887843-48887862 | MS.gene000712:CDS | 35.0% | |
TTGCAAAAAGTGGAACTTCA+AGG | + | chr7.1:48888224-48888243 | MS.gene000712:CDS | 35.0% | |
TTGCTTAAGCCAATTTGTGA+AGG | + | chr7.1:48887584-48887603 | MS.gene000712:CDS | 35.0% | |
! | ATCCAAGTTGAGGGAAATAA+AGG | + | chr7.1:48888168-48888187 | MS.gene000712:CDS | 35.0% |
! | CAAATTGGCTTAAGCAATTG+AGG | - | chr7.1:48887581-48887600 | None:intergenic | 35.0% |
! | TCTATGTTTGGTGACCATAA+AGG | + | chr7.1:48886403-48886422 | MS.gene000712:intron | 35.0% |
! | TTCCTTTATTTCCCTCAACT+TGG | - | chr7.1:48888173-48888192 | None:intergenic | 35.0% |
!! | TAATCCAAAGTTTTATCGGC+AGG | - | chr7.1:48887137-48887156 | None:intergenic | 35.0% |
!! | TAGGTCGATAAGTGGTTTTA+AGG | - | chr7.1:48887834-48887853 | None:intergenic | 35.0% |
!! | TAGTGCTGATAACGTGAAAA+GGG | - | chr7.1:48887777-48887796 | None:intergenic | 35.0% |
!!! | AAGAAAAGGTAGTTTTGGTG+GGG | - | chr7.1:48886881-48886900 | None:intergenic | 35.0% |
AATAGCAGTGAAAGATGGTG+CGG | + | chr7.1:48887934-48887953 | MS.gene000712:CDS | 40.0% | |
ACAAGTGGCTGAAATTCCAA+TGG | + | chr7.1:48887685-48887704 | MS.gene000712:CDS | 40.0% | |
ACTTAACCATCGGGTTTCTA+GGG | - | chr7.1:48887175-48887194 | None:intergenic | 40.0% | |
AGCAACATCCTTCATAGCTA+AGG | - | chr7.1:48887873-48887892 | None:intergenic | 40.0% | |
AGTTGAAGAAGGAGTTGAAG+AGG | + | chr7.1:48885793-48885812 | MS.gene000712:CDS | 40.0% | |
CAACTCCTTCTTCAACTCTA+AGG | - | chr7.1:48885790-48885809 | None:intergenic | 40.0% | |
CGCATAATGCTTAGCAAACA+AGG | - | chr7.1:48888079-48888098 | None:intergenic | 40.0% | |
CTTATCGACCTATTGGAAGA+AGG | + | chr7.1:48887842-48887861 | MS.gene000712:CDS | 40.0% | |
CTTCTGATGAGTCGAAAGTA+GGG | - | chr7.1:48888023-48888042 | None:intergenic | 40.0% | |
GAAAGCCTTAGAGTTGAAGA+AGG | + | chr7.1:48885782-48885801 | MS.gene000712:CDS | 40.0% | |
GAGAGAACTTGATGAGTTTG+AGG | - | chr7.1:48887296-48887315 | None:intergenic | 40.0% | |
GCAACATCCTTCATAGCTAA+GGG | - | chr7.1:48887872-48887891 | None:intergenic | 40.0% | |
GCTTTCTTCAACATAACCTC+TGG | - | chr7.1:48885768-48885787 | None:intergenic | 40.0% | |
GGTAATTCCAATCCTCATGA+AGG | + | chr7.1:48887706-48887725 | MS.gene000712:CDS | 40.0% | |
GTAGATGGAAAGAGAAAGAG+TGG | + | chr7.1:48886686-48886705 | MS.gene000712:intron | 40.0% | |
GTTACCTGCCGATAAAACTT+TGG | + | chr7.1:48887130-48887149 | MS.gene000712:intron | 40.0% | |
GTTGAGGGAAATAAAGGAAG+AGG | + | chr7.1:48888174-48888193 | MS.gene000712:CDS | 40.0% | |
TACTTAACCATCGGGTTTCT+AGG | - | chr7.1:48887176-48887195 | None:intergenic | 40.0% | |
TCTTCCAATAGGTCGATAAG+TGG | - | chr7.1:48887842-48887861 | None:intergenic | 40.0% | |
! | ATTTGGAGTAAGCAGAGTGT+GGG | - | chr7.1:48887318-48887337 | None:intergenic | 40.0% |
!! | CTAGTGCTGATAACGTGAAA+AGG | - | chr7.1:48887778-48887797 | None:intergenic | 40.0% |
!!! | GATAAGTGGTTTTAAGGCGT+TGG | - | chr7.1:48887828-48887847 | None:intergenic | 40.0% |
AGGGAATCCCTTAGCTATGA+AGG | + | chr7.1:48887862-48887881 | MS.gene000712:CDS | 45.0% | |
AGGGATTCCCTTCTTCCAAT+AGG | - | chr7.1:48887853-48887872 | None:intergenic | 45.0% | |
AGGGCTAAGAGAAAAGCTAG+TGG | + | chr7.1:48888244-48888263 | MS.gene000712:CDS | 45.0% | |
CACATCTCAATGCCTTCATG+AGG | - | chr7.1:48887721-48887740 | None:intergenic | 45.0% | |
CCTACTTTCGACTCATCAGA+AGG | + | chr7.1:48888021-48888040 | MS.gene000712:CDS | 45.0% | |
CCTTCTGATGAGTCGAAAGT+AGG | - | chr7.1:48888024-48888043 | None:intergenic | 45.0% | |
CTCAATGCCTTCATGAGGAT+TGG | - | chr7.1:48887716-48887735 | None:intergenic | 45.0% | |
GGTGTTAGATTCTGATCCAG+AGG | + | chr7.1:48885749-48885768 | MS.gene000712:CDS | 45.0% | |
TCAGAAGGCTGTCCTTGAAA+TGG | + | chr7.1:48888036-48888055 | MS.gene000712:CDS | 45.0% | |
TGACCAGAAGCAACAATGAC+AGG | - | chr7.1:48886017-48886036 | None:intergenic | 45.0% | |
! | CTTAACCATCGGGTTTCTAG+GGG | - | chr7.1:48887174-48887193 | None:intergenic | 45.0% |
! | GATCCTGTCATTGTTGCTTC+TGG | + | chr7.1:48886011-48886030 | MS.gene000712:CDS | 45.0% |
! | GATTTGGAGTAAGCAGAGTG+TGG | - | chr7.1:48887319-48887338 | None:intergenic | 45.0% |
! | GTTTGGTGACCATAAAGGTG+TGG | + | chr7.1:48886408-48886427 | MS.gene000712:intron | 45.0% |
! | TGTCATTGTTGCTTCTGGTC+AGG | + | chr7.1:48886016-48886035 | MS.gene000712:CDS | 45.0% |
!! | CTCATGAAGGCATTGAGATG+TGG | + | chr7.1:48887719-48887738 | MS.gene000712:CDS | 45.0% |
!!! | AAAGGTAGTTTTGGTGGGGA+AGG | - | chr7.1:48886877-48886896 | None:intergenic | 45.0% |
!!! | TAATTTAATTTCATTAAAAT+TGG | + | chr7.1:48886146-48886165 | MS.gene000712:intron | 5.0% |
GAAAAGGGTTGCTGCAGCAT+TGG | - | chr7.1:48887762-48887781 | None:intergenic | 50.0% | |
GAGCTCGTGTGAACGCAATA+AGG | + | chr7.1:48888102-48888121 | MS.gene000712:CDS | 50.0% | |
GATGAGTCGAAAGTAGGGCA+AGG | - | chr7.1:48888018-48888037 | None:intergenic | 50.0% | |
GGATCAGAATCTAACACCCC+TGG | - | chr7.1:48885747-48885766 | None:intergenic | 50.0% | |
GTCCTTGAAATGGCAGAGCT+TGG | + | chr7.1:48888046-48888065 | MS.gene000712:CDS | 50.0% | |
GTGATTCGTCGACGTGAACT+CGG | - | chr7.1:48887988-48888007 | None:intergenic | 50.0% | |
TGGTGCGGTTAGAGTGATCA+TGG | + | chr7.1:48887949-48887968 | MS.gene000712:CDS | 50.0% | |
TTGAGACACCCTTGAGTGAG+TGG | + | chr7.1:48886741-48886760 | MS.gene000712:intron | 50.0% | |
! | ATCGGGTTTCTAGGGGACAA+GGG | - | chr7.1:48887167-48887186 | None:intergenic | 50.0% |
! | CTCCAAGCTCTGCCATTTCA+AGG | - | chr7.1:48888051-48888070 | None:intergenic | 50.0% |
AGACACCCTTGAGTGAGTGG+TGG | + | chr7.1:48886744-48886763 | MS.gene000712:intron | 55.0% | |
CACCACCACCACTCACTCAA+GGG | - | chr7.1:48886752-48886771 | None:intergenic | 55.0% | |
CTTGTCCCCTAGAAACCCGA+TGG | + | chr7.1:48887166-48887185 | MS.gene000712:intron | 55.0% | |
TCACCACCACCACTCACTCA+AGG | - | chr7.1:48886753-48886772 | None:intergenic | 55.0% | |
! | CATCGGGTTTCTAGGGGACA+AGG | - | chr7.1:48887168-48887187 | None:intergenic | 55.0% |
! | TCGGGTTTCTAGGGGACAAG+GGG | - | chr7.1:48887166-48887185 | None:intergenic | 55.0% |
CACCCTTGAGTGAGTGGTGG+TGG | + | chr7.1:48886747-48886766 | MS.gene000712:intron | 60.0% | |
! | TTCTAGGGGACAAGGGGCTC+TGG | - | chr7.1:48887160-48887179 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 48885735 | 48888315 | 48885735 | ID=MS.gene000712 |
chr7.1 | mRNA | 48885735 | 48888315 | 48885735 | ID=MS.gene000712.t1;Parent=MS.gene000712 |
chr7.1 | exon | 48885735 | 48886037 | 48885735 | ID=MS.gene000712.t1.exon1;Parent=MS.gene000712.t1 |
chr7.1 | CDS | 48885735 | 48886037 | 48885735 | ID=cds.MS.gene000712.t1;Parent=MS.gene000712.t1 |
chr7.1 | exon | 48887239 | 48888315 | 48887239 | ID=MS.gene000712.t1.exon2;Parent=MS.gene000712.t1 |
chr7.1 | CDS | 48887239 | 48888315 | 48887239 | ID=cds.MS.gene000712.t1;Parent=MS.gene000712.t1 |
Gene Sequence |
Protein sequence |