AlfalfaGEDB | MS.gene000721

M. sativa cultivar XinJiangDaYe / MS.gene000721

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000721.t1	ACN79540.1	94.6	221	12	0	8	228	44	264	1.30E-116	429.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000721.t1	Q9FNV9	48.3	180	66	5	8	173	43	209	6.4e-32	139.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000721.t1	G7K1W9	94.6	221	12	0	8	228	56	276	9.3e-117	429.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene000721.t1	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene89211	MS.gene000721	PPI
MS.gene000721	MS.gene26076	PPI
MS.gene89208	MS.gene000721	PPI
MS.gene000721	MS.gene29449	PPI
MS.gene017438	MS.gene000721	PPI
MS.gene000721	MS.gene89207	PPI
MS.gene29450	MS.gene000721	PPI
MS.gene26075	MS.gene000721	PPI
MS.gene000721	MS.gene29450	PPI
MS.gene000721	MS.gene017439	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000721.t1	MTR_5g079220	94.570	221	12	0	8	228	56	276	7.85e-144	403
MS.gene000721.t1	MTR_5g079290	59.193	223	73	6	8	222	52	264	1.79e-75	229
MS.gene000721.t1	MTR_7g017260	54.348	230	83	6	4	224	58	274	2.70e-75	229
MS.gene000721.t1	MTR_5g078800	60.000	225	72	8	8	221	42	259	1.74e-74	226
MS.gene000721.t1	MTR_0001s0360	56.502	223	79	7	8	224	42	252	1.72e-73	223
MS.gene000721.t1	MTR_5g078930	63.975	161	48	3	8	164	44	198	9.44e-67	205
MS.gene000721.t1	MTR_5g078950	54.274	234	78	7	8	222	42	265	1.19e-66	206
MS.gene000721.t1	MTR_5g078860	51.341	261	77	9	8	220	42	300	6.53e-66	206
MS.gene000721.t1	MTR_5g079120	51.770	226	84	7	8	224	96	305	1.92e-64	202
MS.gene000721.t1	MTR_5g078910	49.248	266	75	7	9	224	43	298	4.72e-62	196
MS.gene000721.t1	MTR_8g060940	53.070	228	75	6	5	224	39	242	4.00e-56	179
MS.gene000721.t1	MTR_0193s0090	53.797	158	59	3	8	164	42	186	7.71e-50	162
MS.gene000721.t1	MTR_0247s0040	58.784	148	51	1	8	155	42	179	1.61e-47	155
MS.gene000721.t1	MTR_0197s0010	58.252	103	39	1	9	111	37	135	1.05e-37	131
MS.gene000721.t1	MTR_5g079140	54.622	119	44	3	50	164	7	119	1.11e-35	123
MS.gene000721.t1	MTR_4g125520	55.882	102	45	0	9	110	48	149	6.10e-34	124
MS.gene000721.t1	MTR_0023s0260	47.429	175	76	7	57	224	10	175	1.55e-32	116
MS.gene000721.t1	MTR_4g100720	64.368	87	30	1	1	87	41	126	2.26e-31	113
MS.gene000721.t1	MTR_5g079670	65.714	70	24	0	9	78	47	116	6.30e-30	110
MS.gene000721.t1	MTR_3g097450	52.128	94	45	0	9	102	48	141	6.55e-30	113
MS.gene000721.t1	MTR_7g115650	68.116	69	22	0	9	77	48	116	6.72e-30	110
MS.gene000721.t1	MTR_3g083540	63.889	72	26	0	9	80	77	148	7.91e-30	112
MS.gene000721.t1	MTR_0251s0050	57.292	96	35	2	8	99	48	141	2.66e-29	110
MS.gene000721.t1	MTR_4g073420	44.961	129	60	2	9	137	48	165	2.75e-29	111
MS.gene000721.t1	MTR_8g027345	56.818	88	32	1	9	90	48	135	5.89e-29	110
MS.gene000721.t1	MTR_0008s0470	54.455	101	41	2	8	103	48	148	1.42e-28	109
MS.gene000721.t1	MTR_1g076150	57.647	85	34	1	9	91	48	132	1.77e-28	108
MS.gene000721.t1	MTR_8g020490	63.636	77	28	0	1	77	36	112	1.91e-28	108
MS.gene000721.t1	MTR_4g485530	61.111	72	28	0	9	80	48	119	2.24e-28	106
MS.gene000721.t1	MTR_0008s0390	61.728	81	27	1	8	84	48	128	2.53e-28	108
MS.gene000721.t1	MTR_2g089450	51.020	98	47	1	9	105	48	145	4.16e-28	107
MS.gene000721.t1	MTR_7g096930	58.025	81	34	0	9	89	48	128	8.78e-28	107
MS.gene000721.t1	MTR_7g117730	59.459	74	30	0	9	82	48	121	1.26e-27	106
MS.gene000721.t1	MTR_1g043050	60.274	73	29	0	9	81	48	120	3.36e-27	105
MS.gene000721.t1	MTR_1g100653	53.409	88	41	0	9	96	48	135	7.95e-27	104
MS.gene000721.t1	MTR_1g043080	60.000	70	28	0	9	78	48	117	1.05e-26	103
MS.gene000721.t1	MTR_5g014990	53.086	81	38	0	9	89	49	129	3.65e-26	103
MS.gene000721.t1	MTR_2g089620	62.857	70	26	0	9	78	48	117	8.81e-26	102
MS.gene000721.t1	MTR_2g011660	61.429	70	27	0	9	78	49	118	1.18e-25	102
MS.gene000721.t1	MTR_7g010210	62.857	70	26	0	8	77	47	116	1.26e-25	101
MS.gene000721.t1	MTR_7g010210	62.857	70	26	0	8	77	47	116	1.30e-25	102
MS.gene000721.t1	MTR_2g089420	44.444	99	55	0	9	107	47	145	1.56e-25	103
MS.gene000721.t1	MTR_3g039990	54.651	86	39	0	9	94	49	134	1.92e-25	101
MS.gene000721.t1	MTR_3g074520	60.000	70	28	0	9	78	48	117	2.16e-25	102
MS.gene000721.t1	MTR_4g091490	61.429	70	27	0	9	78	49	118	2.51e-25	102
MS.gene000721.t1	MTR_8g095390	53.425	73	34	0	8	80	47	119	2.73e-25	101
MS.gene000721.t1	MTR_0008s0280	58.824	68	28	0	8	75	47	114	4.24e-25	99.0
MS.gene000721.t1	MTR_7g076740	45.098	102	55	1	9	110	49	149	4.77e-25	100
MS.gene000721.t1	MTR_4g105130	47.059	102	39	1	9	95	48	149	8.68e-25	100
MS.gene000721.t1	MTR_1g112760	42.857	112	46	2	9	105	49	157	1.11e-24	97.8
MS.gene000721.t1	MTR_4g082290	57.143	84	35	1	9	92	48	130	2.08e-24	100
MS.gene000721.t1	MTR_1g017140	51.250	80	39	0	9	88	49	128	2.22e-24	99.4
MS.gene000721.t1	MTR_4g082230	57.143	84	35	1	9	92	48	130	2.33e-24	100
MS.gene000721.t1	MTR_5g007370	56.338	71	31	0	8	78	47	117	3.11e-24	98.2
MS.gene000721.t1	MTR_4g065017	54.545	77	35	0	1	77	45	121	3.14e-24	98.6
MS.gene000721.t1	MTR_2g097910	53.247	77	36	0	1	77	48	124	3.24e-24	98.2
MS.gene000721.t1	MTR_6g055910	55.405	74	33	0	9	82	21	94	3.34e-24	97.1
MS.gene000721.t1	MTR_3g077110	55.556	72	32	0	9	80	48	119	3.94e-24	98.6
MS.gene000721.t1	MTR_1g017000	57.746	71	30	0	9	79	49	119	4.45e-24	96.7
MS.gene000721.t1	MTR_7g011170	61.429	70	27	0	9	78	48	117	4.52e-24	97.8
MS.gene000721.t1	MTR_0140s0030	60.870	69	27	0	9	77	49	117	4.82e-24	98.2
MS.gene000721.t1	MTR_0489s0020	60.870	69	27	0	9	77	49	117	4.82e-24	98.2
MS.gene000721.t1	MTR_8g017390	57.746	71	30	0	9	79	49	119	5.06e-24	99.8
MS.gene000721.t1	MTR_8g031360	55.714	70	31	0	9	78	50	119	5.37e-24	97.4
MS.gene000721.t1	MTR_3g103570	55.128	78	33	1	9	84	49	126	6.20e-24	98.2
MS.gene000721.t1	MTR_3g461490	60.870	69	27	0	9	77	48	116	6.61e-24	97.8
MS.gene000721.t1	MTR_5g029840	57.746	71	30	0	8	78	47	117	6.90e-24	97.8
MS.gene000721.t1	MTR_7g110830	57.971	69	29	0	9	77	48	116	7.41e-24	98.2
MS.gene000721.t1	MTR_4g478180	56.338	71	31	0	8	78	48	118	7.78e-24	97.8
MS.gene000721.t1	MTR_3g028740	53.247	77	36	0	1	77	50	126	8.34e-24	97.8
MS.gene000721.t1	MTR_6g055910	55.405	74	33	0	9	82	50	123	8.34e-24	96.7
MS.gene000721.t1	MTR_2g034790	46.739	92	49	0	9	100	48	139	1.09e-23	97.1
MS.gene000721.t1	MTR_4g121460	41.228	114	65	1	9	120	48	161	1.19e-23	97.1
MS.gene000721.t1	MTR_0063s0090	56.061	66	29	0	9	74	48	113	1.26e-23	94.7
MS.gene000721.t1	MTR_1g085040	57.971	69	29	0	9	77	48	116	1.31e-23	97.4
MS.gene000721.t1	MTR_7g087130	60.000	70	28	0	8	77	47	116	1.61e-23	96.7
MS.gene000721.t1	MTR_1g100667	54.667	75	34	0	8	82	48	122	1.70e-23	95.5
MS.gene000721.t1	MTR_8g017440	56.164	73	32	0	8	80	47	119	1.99e-23	96.7
MS.gene000721.t1	MTR_8g017340	57.746	71	30	0	9	79	49	119	2.12e-23	97.8
MS.gene000721.t1	MTR_6g009430	57.746	71	30	0	8	78	47	117	2.16e-23	96.3
MS.gene000721.t1	MTR_1g085640	55.556	72	32	0	9	80	48	119	2.63e-23	97.1
MS.gene000721.t1	MTR_8g017540	44.954	109	41	3	8	115	93	183	2.95e-23	96.7
MS.gene000721.t1	MTR_2g099740	54.795	73	33	0	8	80	47	119	3.14e-23	96.7
MS.gene000721.t1	MTR_2g064160	52.778	72	34	0	9	80	47	118	5.72e-23	94.7
MS.gene000721.t1	MTR_4g097570	36.129	155	89	4	9	153	50	204	5.73e-23	94.7
MS.gene000721.t1	MTR_4g097570	36.129	155	89	4	9	153	49	203	5.76e-23	94.4
MS.gene000721.t1	MTR_4g057635	56.164	73	32	0	9	81	49	121	6.73e-23	94.7
MS.gene000721.t1	MTR_8g017350	56.338	71	31	0	9	79	49	119	6.91e-23	96.7
MS.gene000721.t1	MTR_4g102380	55.714	70	31	0	9	78	48	117	7.49e-23	94.0
MS.gene000721.t1	MTR_6g012690	60.000	70	28	0	9	78	48	117	8.33e-23	95.1
MS.gene000721.t1	MTR_6g090405	57.746	71	30	0	9	79	49	119	1.03e-22	93.2
MS.gene000721.t1	MTR_7g111290	64.516	62	22	0	9	70	6	67	1.12e-22	94.4
MS.gene000721.t1	MTR_6g012180	62.500	64	24	0	9	72	48	111	1.49e-22	94.0
MS.gene000721.t1	MTR_4g063100	51.765	85	38	1	1	85	35	116	1.51e-22	92.8
MS.gene000721.t1	MTR_8g017500	55.556	72	32	0	9	80	48	119	1.66e-22	94.4
MS.gene000721.t1	MTR_4g063100	53.846	78	33	1	8	85	13	87	1.70e-22	91.7
MS.gene000721.t1	MTR_7g102110	56.944	72	31	0	8	79	48	119	2.18e-22	92.4
MS.gene000721.t1	MTR_5g078140	57.971	69	29	0	9	77	48	116	2.95e-22	93.2
MS.gene000721.t1	MTR_7g111290	64.516	62	22	0	9	70	48	109	3.00e-22	94.0
MS.gene000721.t1	MTR_8g098860	55.072	69	31	0	9	77	48	116	3.34e-22	92.8
MS.gene000721.t1	MTR_3g065440	57.971	69	29	0	9	77	48	116	3.77e-22	92.8
MS.gene000721.t1	MTR_2g067420	56.923	65	28	0	8	72	49	113	1.52e-21	91.3
MS.gene000721.t1	MTR_4g128670	61.905	63	24	0	9	71	49	111	1.58e-21	91.7
MS.gene000721.t1	MTR_2g095520	61.905	63	24	0	9	71	49	111	2.95e-21	90.5
MS.gene000721.t1	MTR_2g096380	36.429	140	75	2	1	140	15	140	3.58e-21	88.2
MS.gene000721.t1	MTR_3g011610	54.412	68	31	0	8	75	72	139	4.20e-21	91.7
MS.gene000721.t1	MTR_5g042030	54.286	70	32	0	9	78	43	112	6.00e-21	89.0
MS.gene000721.t1	MTR_2g096380	37.143	140	74	2	1	140	34	159	6.54e-21	87.8
MS.gene000721.t1	MTR_7g035075	45.652	92	45	1	1	92	42	128	7.02e-21	87.0
MS.gene000721.t1	MTR_1g062940	52.000	75	36	0	9	83	42	116	9.86e-21	87.0
MS.gene000721.t1	MTR_5g010020	57.143	63	27	0	9	71	48	110	1.13e-20	89.0
MS.gene000721.t1	MTR_1g110460	54.667	75	34	0	1	75	54	128	5.37e-20	86.7
MS.gene000721.t1	MTR_8g042410	50.746	67	33	0	9	75	73	139	7.58e-20	87.8
MS.gene000721.t1	MTR_3g052430	50.746	67	33	0	9	75	77	143	8.58e-20	87.8
MS.gene000721.t1	MTR_1g073170	55.224	67	30	0	9	75	56	122	8.73e-20	85.5
MS.gene000721.t1	MTR_3g052450	50.746	67	33	0	9	75	76	142	9.52e-20	87.8
MS.gene000721.t1	MTR_6g006030	48.052	77	40	0	1	77	42	118	1.28e-19	84.0
MS.gene000721.t1	MTR_1g045610	56.716	67	29	0	9	75	57	123	1.71e-19	84.7
MS.gene000721.t1	MTR_5g041570	44.444	81	40	1	7	87	165	240	2.44e-19	86.3
MS.gene000721.t1	MTR_0023s0210	85.714	42	6	0	8	49	42	83	4.51e-19	79.0
MS.gene000721.t1	MTR_6g074860	52.308	65	31	0	7	71	35	99	6.57e-19	82.8
MS.gene000721.t1	MTR_1g086530	53.333	75	35	0	1	75	61	135	6.63e-19	83.2
MS.gene000721.t1	MTR_4g082040	47.826	69	36	0	7	75	136	204	7.42e-19	84.7
MS.gene000721.t1	MTR_1g086510	40.000	125	64	3	1	118	49	169	7.77e-19	82.8
MS.gene000721.t1	MTR_7g109320	53.521	71	33	0	9	79	48	118	1.91e-18	83.2
MS.gene000721.t1	MTR_3g463400	41.111	90	51	1	7	94	164	253	4.83e-18	82.4
MS.gene000721.t1	MTR_3g045430	50.725	69	34	0	9	77	49	117	7.63e-18	80.9
MS.gene000721.t1	MTR_3g089045	44.944	89	44	1	7	95	47	130	1.29e-17	80.1
MS.gene000721.t1	MTR_7g037260	47.297	74	39	0	8	81	177	250	1.33e-17	80.9
MS.gene000721.t1	MTR_6g027340	49.231	65	33	0	7	71	47	111	1.50e-17	78.2
MS.gene000721.t1	MTR_1g021230	47.059	68	36	0	8	75	92	159	2.76e-17	80.1
MS.gene000721.t1	MTR_2g088170	52.239	67	32	0	9	75	65	131	3.09e-17	80.1
MS.gene000721.t1	MTR_4g019370	44.000	75	42	0	8	82	70	144	3.26e-17	79.7
MS.gene000721.t1	MTR_6g027360	36.792	106	58	2	7	112	109	205	3.61e-17	79.0
MS.gene000721.t1	MTR_7g086960	53.846	65	30	0	7	71	120	184	4.18e-17	79.3
MS.gene000721.t1	MTR_1g083630	49.254	67	34	0	9	75	48	114	4.46e-17	80.1
MS.gene000721.t1	MTR_7g035350	48.052	77	39	1	5	80	254	330	6.46e-17	79.3
MS.gene000721.t1	MTR_7g451170	43.038	79	45	0	7	85	222	300	6.66e-17	79.0
MS.gene000721.t1	MTR_3g101290	50.725	69	34	0	7	75	68	136	7.83e-17	76.6
MS.gene000721.t1	MTR_5g049190	43.836	73	41	0	8	80	51	123	1.12e-16	76.6
MS.gene000721.t1	MTR_5g070020	42.500	80	46	0	7	86	153	232	1.58e-16	77.8
MS.gene000721.t1	MTR_5g016510	38.542	96	59	0	5	100	34	129	1.97e-16	77.0
MS.gene000721.t1	MTR_3g077650	42.308	78	45	0	8	85	213	290	2.47e-16	77.4
MS.gene000721.t1	MTR_2g033170	52.632	76	36	0	1	76	52	127	3.05e-16	76.6
MS.gene000721.t1	MTR_4g088015	42.667	75	43	0	7	81	252	326	3.23e-16	77.0
MS.gene000721.t1	MTR_4g128190	47.059	68	35	1	9	75	34	101	3.59e-16	75.1
MS.gene000721.t1	MTR_6g027370	46.753	77	36	1	8	84	131	202	3.81e-16	76.6
MS.gene000721.t1	MTR_4g094982	45.588	68	37	0	8	75	37	104	6.58e-16	75.1
MS.gene000721.t1	MTR_3g110028	42.254	71	41	0	9	79	118	188	7.95e-16	76.3
MS.gene000721.t1	MTR_1g026870	42.254	71	41	0	9	79	118	188	9.40e-16	76.3
MS.gene000721.t1	MTR_1g057980	47.761	67	35	0	8	74	112	178	1.32e-15	74.3
MS.gene000721.t1	MTR_5g062790	47.059	68	35	1	9	75	45	112	1.70e-15	74.3
MS.gene000721.t1	MTR_5g088080	45.588	68	36	1	9	75	48	115	4.39e-15	72.8
MS.gene000721.t1	MTR_5g088150	45.588	68	36	1	9	75	48	115	4.39e-15	72.8
MS.gene000721.t1	MTR_5g488210	45.588	68	36	1	9	75	48	115	4.39e-15	72.8
MS.gene000721.t1	MTR_5g088640	45.588	68	36	1	9	75	48	115	4.76e-15	72.8
MS.gene000721.t1	MTR_5g488170	45.588	68	36	1	9	75	48	115	5.06e-15	72.0
MS.gene000721.t1	MTR_2g088730	66.667	39	13	0	31	69	34	72	5.10e-15	68.2
MS.gene000721.t1	MTR_4g123040	52.000	75	36	0	1	75	52	126	1.56e-14	71.6
MS.gene000721.t1	MTR_6g055910	53.846	52	24	0	31	82	2	53	3.19e-14	69.3
MS.gene000721.t1	MTR_6g015455	45.714	70	38	0	5	74	34	103	3.70e-14	71.6
MS.gene000721.t1	MTR_4g105660	39.726	73	44	0	8	80	212	284	4.97e-14	70.9
MS.gene000721.t1	MTR_7g061330	42.029	69	40	0	9	77	146	214	5.37e-14	70.9
MS.gene000721.t1	MTR_7g461410	42.029	69	40	0	9	77	146	214	5.37e-14	70.9
MS.gene000721.t1	MTR_5g082910	45.455	66	36	0	8	73	51	116	5.75e-14	69.7
MS.gene000721.t1	MTR_7g061330	41.096	73	43	0	5	77	106	178	7.43e-14	70.5
MS.gene000721.t1	MTR_8g006470	44.928	69	37	1	8	75	45	113	1.03e-13	68.9
MS.gene000721.t1	MTR_5g088610	45.455	66	35	1	12	76	48	113	1.15e-13	69.3
MS.gene000721.t1	MTR_4g029540	47.143	70	35	2	9	77	46	114	1.07e-12	66.2
MS.gene000721.t1	MTR_7g037130	43.284	67	38	0	8	74	177	243	1.47e-12	66.2
MS.gene000721.t1	MTR_7g450950	34.444	90	59	0	8	97	189	278	1.91e-12	65.9
MS.gene000721.t1	MTR_4g063100	54.902	51	20	1	35	85	5	52	7.24e-12	62.4
MS.gene000721.t1	MTR_7g061550	40.580	69	41	0	9	77	43	111	4.54e-11	62.0
MS.gene000721.t1	MTR_5g010650	39.394	66	40	0	5	70	139	204	5.82e-11	62.0
MS.gene000721.t1	MTR_2g096380	53.191	47	22	0	35	81	5	51	7.35e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene000721.t1	AT1G66370	48.333	180	66	5	8	173	43	209	1.27e-41	142
MS.gene000721.t1	AT3G13540	45.455	143	65	4	9	151	59	188	6.27e-33	119
MS.gene000721.t1	AT5G14750	62.821	78	29	0	9	86	18	95	1.86e-31	113
MS.gene000721.t1	AT3G27920	69.014	71	22	0	9	79	50	120	2.66e-31	115
MS.gene000721.t1	AT5G14750	58.140	86	36	0	1	86	44	129	3.84e-31	114
MS.gene000721.t1	AT5G40330	69.565	69	21	0	9	77	48	116	1.20e-30	113
MS.gene000721.t1	AT1G66390	47.486	179	68	4	8	173	43	208	1.59e-30	113
MS.gene000721.t1	AT1G56650	43.299	194	81	6	8	189	43	219	2.23e-30	113
MS.gene000721.t1	AT4G38620	61.111	72	28	0	9	80	48	119	2.44e-29	111
MS.gene000721.t1	AT1G66380	82.353	68	12	0	8	75	10	77	4.63e-29	105
MS.gene000721.t1	AT4G09460	39.726	146	80	3	9	153	48	186	7.10e-29	108
MS.gene000721.t1	AT5G52600	64.557	79	28	0	9	87	48	126	7.66e-29	107
MS.gene000721.t1	AT2G16720	61.111	72	28	0	9	80	48	119	9.46e-29	109
MS.gene000721.t1	AT3G23250	55.056	89	34	1	9	91	48	136	1.05e-28	109
MS.gene000721.t1	AT1G66380	82.353	68	12	0	8	75	43	110	1.05e-28	105
MS.gene000721.t1	AT1G22640	61.111	72	28	0	9	80	48	119	1.23e-28	108
MS.gene000721.t1	AT1G35515	37.241	145	80	2	9	152	48	182	8.87e-28	105
MS.gene000721.t1	AT1G06180	60.000	75	30	0	9	83	48	122	3.70e-27	104
MS.gene000721.t1	AT4G34990	55.844	77	34	0	4	80	43	119	1.05e-26	103
MS.gene000721.t1	AT5G35550	57.143	84	31	1	9	92	53	131	1.14e-26	103
MS.gene000721.t1	AT1G16490	59.155	71	29	0	9	79	50	120	2.08e-26	103
MS.gene000721.t1	AT4G17785	62.857	70	26	0	9	78	49	118	2.11e-26	104
MS.gene000721.t1	AT4G17785	62.857	70	26	0	9	78	49	118	2.20e-26	105
MS.gene000721.t1	AT5G35550	57.831	83	30	1	9	91	50	127	2.21e-26	102
MS.gene000721.t1	AT4G28110	61.429	70	27	0	9	78	48	117	3.67e-26	102
MS.gene000721.t1	AT3G61250	53.750	80	37	0	9	88	48	127	4.44e-26	103
MS.gene000721.t1	AT4G05100	61.429	70	27	0	9	78	49	118	4.81e-26	103
MS.gene000721.t1	AT5G65790	51.163	86	42	0	9	94	49	134	6.33e-26	103
MS.gene000721.t1	AT5G16770	61.972	71	27	0	8	78	47	117	7.47e-26	102
MS.gene000721.t1	AT5G16770	61.972	71	27	0	8	78	47	117	7.47e-26	102
MS.gene000721.t1	AT5G16770	61.972	71	27	0	8	78	47	117	9.47e-26	102
MS.gene000721.t1	AT5G16770	61.972	71	27	0	8	78	47	117	9.47e-26	102
MS.gene000721.t1	AT5G65230	60.000	70	28	0	9	78	48	117	1.14e-25	102
MS.gene000721.t1	AT5G12870	54.545	77	35	0	1	77	46	122	1.43e-25	101
MS.gene000721.t1	AT4G21440	61.429	70	27	0	9	78	48	117	1.46e-25	102
MS.gene000721.t1	AT5G57620	58.667	75	31	0	9	83	49	123	1.72e-25	102
MS.gene000721.t1	AT2G31180	62.319	69	26	0	9	77	48	116	2.15e-25	100
MS.gene000721.t1	AT5G10280	61.429	70	27	0	9	78	48	117	3.29e-25	101
MS.gene000721.t1	AT3G49690	55.263	76	34	0	9	84	49	124	3.53e-25	100
MS.gene000721.t1	AT3G02940	60.000	70	28	0	9	78	48	117	3.75e-25	100
MS.gene000721.t1	AT1G74650	60.274	73	29	0	9	81	48	120	3.82e-25	101
MS.gene000721.t1	AT3G53200	58.667	75	31	0	1	75	37	111	5.00e-25	99.0
MS.gene000721.t1	AT5G54230	60.000	70	28	0	9	78	48	117	5.77e-25	100
MS.gene000721.t1	AT5G62320	45.714	105	43	2	9	104	56	155	5.78e-25	99.0
MS.gene000721.t1	AT3G02940	60.000	70	28	0	9	78	48	117	5.83e-25	100
MS.gene000721.t1	AT3G02940	60.000	70	28	0	9	78	48	117	5.83e-25	100
MS.gene000721.t1	AT3G47600	63.768	69	25	0	9	77	48	116	7.31e-25	100
MS.gene000721.t1	AT3G12820	55.556	72	32	0	9	80	2	73	8.72e-25	97.1
MS.gene000721.t1	AT3G47600	63.768	69	25	0	9	77	42	110	8.85e-25	100
MS.gene000721.t1	AT5G56110	62.857	70	26	0	8	77	47	116	9.51e-25	99.8
MS.gene000721.t1	AT3G53200	62.687	67	25	0	9	75	12	78	9.71e-25	97.4
MS.gene000721.t1	AT4G01680	57.534	73	31	0	8	80	47	119	1.13e-24	98.2
MS.gene000721.t1	AT5G26660	54.878	82	36	1	9	90	17	97	1.34e-24	99.4
MS.gene000721.t1	AT3G28910	62.319	69	26	0	9	77	48	116	1.40e-24	99.4
MS.gene000721.t1	AT1G57560	55.556	72	32	0	9	80	48	119	2.21e-24	98.2
MS.gene000721.t1	AT1G57560	55.556	72	32	0	9	80	48	119	2.24e-24	98.6
MS.gene000721.t1	AT5G15310	53.333	90	38	1	9	94	48	137	2.62e-24	99.0
MS.gene000721.t1	AT5G15310	53.333	90	38	1	9	94	48	137	2.63e-24	98.6
MS.gene000721.t1	AT1G18570	58.333	72	30	0	9	80	49	120	3.00e-24	99.0
MS.gene000721.t1	AT4G01680	58.333	72	30	0	9	80	48	119	3.11e-24	98.6
MS.gene000721.t1	AT3G08500	60.870	69	27	0	9	77	66	134	3.45e-24	98.6
MS.gene000721.t1	AT4G01680	58.333	72	30	0	9	80	60	131	3.57e-24	98.6
MS.gene000721.t1	AT5G62470	54.878	82	37	0	6	87	44	125	3.86e-24	98.6
MS.gene000721.t1	AT5G26660	59.420	69	28	0	9	77	48	116	3.99e-24	98.6
MS.gene000721.t1	AT5G23000	40.940	149	81	5	9	152	49	195	4.34e-24	98.2
MS.gene000721.t1	AT5G60890	39.130	138	78	2	9	140	48	185	4.38e-24	97.8
MS.gene000721.t1	AT3G12820	55.556	72	32	0	9	80	50	121	4.39e-24	96.3
MS.gene000721.t1	AT5G15310	53.333	90	38	1	9	94	48	137	4.41e-24	96.7
MS.gene000721.t1	AT4G12350	58.571	70	29	0	9	78	48	117	4.83e-24	97.4
MS.gene000721.t1	AT5G62470	55.696	79	35	0	9	87	48	126	5.31e-24	98.2
MS.gene000721.t1	AT3G30210	48.000	100	51	1	9	108	63	161	5.38e-24	97.1
MS.gene000721.t1	AT3G01140	60.000	70	28	0	9	78	48	117	6.21e-24	98.2
MS.gene000721.t1	AT1G79180	55.714	70	31	0	9	78	50	119	6.52e-24	97.1
MS.gene000721.t1	AT1G09540	55.556	72	32	0	9	80	48	119	9.40e-24	97.8
MS.gene000721.t1	AT5G49330	56.338	71	31	0	9	79	48	118	1.03e-23	97.4
MS.gene000721.t1	AT3G01140	43.810	105	59	0	9	113	91	195	1.11e-23	97.8
MS.gene000721.t1	AT1G79180	55.714	70	31	0	9	78	83	152	1.18e-23	97.1
MS.gene000721.t1	AT5G14750	58.824	68	28	0	19	86	1	68	1.30e-23	92.4
MS.gene000721.t1	AT5G14750	58.824	68	28	0	19	86	1	68	1.30e-23	92.4
MS.gene000721.t1	AT1G34670	58.571	70	29	0	9	78	48	117	2.22e-23	96.7
MS.gene000721.t1	AT3G13890	56.338	71	31	0	9	79	48	118	2.36e-23	96.7
MS.gene000721.t1	AT3G13890	56.338	71	31	0	9	79	57	127	2.44e-23	96.7
MS.gene000721.t1	AT1G74080	55.556	72	32	0	9	80	48	119	3.07e-23	95.9
MS.gene000721.t1	AT1G56160	57.143	70	30	0	9	78	50	119	3.20e-23	95.5
MS.gene000721.t1	AT4G37780	33.133	166	100	4	9	163	49	214	3.87e-23	95.1
MS.gene000721.t1	AT3G12720	52.778	72	34	0	9	80	58	129	3.99e-23	95.1
MS.gene000721.t1	AT1G08810	59.420	69	28	0	9	77	48	116	4.18e-23	94.7
MS.gene000721.t1	AT1G71030	58.824	68	28	0	11	78	4	71	4.31e-23	92.4
MS.gene000721.t1	AT5G07700	58.571	70	29	0	9	78	48	117	5.03e-23	95.5
MS.gene000721.t1	AT5G07700	58.571	70	29	0	9	78	48	117	5.03e-23	95.5
MS.gene000721.t1	AT1G71030	58.824	68	28	0	11	78	18	85	5.32e-23	92.4
MS.gene000721.t1	AT5G07690	55.556	72	32	0	9	80	48	119	9.71e-23	94.7
MS.gene000721.t1	AT4G22680	55.714	70	31	0	9	78	48	117	1.01e-22	93.6
MS.gene000721.t1	AT5G61420	55.556	72	32	0	9	80	48	119	1.07e-22	95.1
MS.gene000721.t1	AT5G16600	42.056	107	50	1	9	103	48	154	1.90e-22	93.6
MS.gene000721.t1	AT3G01530	51.948	77	37	0	1	77	53	129	2.19e-22	91.3
MS.gene000721.t1	AT1G66230	44.554	101	46	1	9	99	48	148	5.89e-22	91.7
MS.gene000721.t1	AT1G74430	52.055	73	35	0	8	80	47	119	6.92e-22	91.3
MS.gene000721.t1	AT2G47460	53.623	69	32	0	9	77	48	116	7.27e-22	92.8
MS.gene000721.t1	AT5G59780	53.425	73	34	0	9	81	23	95	7.50e-22	90.1
MS.gene000721.t1	AT2G47190	57.333	75	32	0	1	75	48	122	7.61e-22	91.3
MS.gene000721.t1	AT2G36890	56.338	71	31	0	9	79	49	119	8.08e-22	91.7
MS.gene000721.t1	AT5G59780	50.617	81	40	0	1	81	36	116	8.74e-22	90.1
MS.gene000721.t1	AT1G69560	38.679	106	62	1	7	112	138	240	9.34e-22	92.0
MS.gene000721.t1	AT1G69560	38.679	106	62	1	7	112	154	256	1.05e-21	92.0
MS.gene000721.t1	AT2G36890	56.338	71	31	0	9	79	90	160	1.12e-21	91.7
MS.gene000721.t1	AT4G25560	58.209	67	28	0	9	75	46	112	1.31e-21	90.9
MS.gene000721.t1	AT3G46130	53.425	73	34	0	9	81	13	85	1.37e-21	89.4
MS.gene000721.t1	AT1G63910	55.072	69	31	0	9	77	48	116	1.51e-21	92.0
MS.gene000721.t1	AT3G62610	55.072	69	31	0	9	77	48	116	1.61e-21	91.3
MS.gene000721.t1	AT3G46130	53.425	73	34	0	9	81	23	95	1.66e-21	89.4
MS.gene000721.t1	AT1G22640	56.452	62	27	0	19	80	1	62	1.71e-21	88.6
MS.gene000721.t1	AT5G55020	54.412	68	31	0	8	75	61	128	1.83e-21	92.4
MS.gene000721.t1	AT3G46130	50.617	81	40	0	1	81	37	117	1.88e-21	89.7
MS.gene000721.t1	AT4G26930	52.941	68	32	0	8	75	54	121	1.92e-21	91.7
MS.gene000721.t1	AT3G48920	46.988	83	43	1	9	90	54	136	2.13e-21	89.7
MS.gene000721.t1	AT5G52260	55.844	77	34	0	9	85	48	124	2.32e-21	89.7
MS.gene000721.t1	AT3G23250	50.633	79	33	1	19	91	1	79	2.55e-21	89.0
MS.gene000721.t1	AT5G14340	55.072	69	31	0	9	77	60	128	4.78e-21	89.0
MS.gene000721.t1	AT5G06100	52.239	67	32	0	9	75	68	134	5.23e-21	90.9
MS.gene000721.t1	AT5G06100	52.239	67	32	0	9	75	68	134	6.23e-21	90.9
MS.gene000721.t1	AT5G06100	52.239	67	32	0	9	75	68	134	6.23e-21	90.9
MS.gene000721.t1	AT5G06100	52.239	67	32	0	9	75	68	134	6.23e-21	90.9
MS.gene000721.t1	AT5G06100	52.239	67	32	0	9	75	68	134	6.23e-21	90.9
MS.gene000721.t1	AT5G40350	38.793	116	67	1	1	112	45	160	1.22e-20	86.7
MS.gene000721.t1	AT3G28470	58.730	63	26	0	9	71	48	110	1.35e-20	88.6
MS.gene000721.t1	AT1G25340	56.000	75	33	0	1	75	46	120	2.34e-20	87.4
MS.gene000721.t1	AT5G40350	39.815	108	61	1	9	112	8	115	2.37e-20	84.7
MS.gene000721.t1	AT2G32460	52.239	67	32	0	9	75	54	120	2.62e-20	89.4
MS.gene000721.t1	AT2G26960	50.704	71	35	0	5	75	52	122	2.82e-20	89.0
MS.gene000721.t1	AT1G18710	52.703	74	34	1	8	81	47	119	3.03e-20	86.7
MS.gene000721.t1	AT2G32460	52.239	67	32	0	9	75	42	108	3.19e-20	89.0
MS.gene000721.t1	AT3G27810	32.065	184	97	4	1	167	48	220	4.21e-20	85.5
MS.gene000721.t1	AT1G26780	39.175	97	54	1	7	103	129	220	4.27e-20	86.7
MS.gene000721.t1	AT1G26780	39.175	97	54	1	7	103	129	220	5.94e-20	87.4
MS.gene000721.t1	AT3G27810	33.962	159	77	4	9	150	7	154	6.07e-20	84.0
MS.gene000721.t1	AT3G11440	47.059	68	36	0	8	75	76	143	8.30e-20	87.8
MS.gene000721.t1	AT3G11440	47.059	68	36	0	8	75	76	143	9.07e-20	87.8
MS.gene000721.t1	AT3G11440	47.059	68	36	0	8	75	76	143	9.07e-20	87.8
MS.gene000721.t1	AT3G11440	47.059	68	36	0	8	75	76	143	9.07e-20	87.8
MS.gene000721.t1	AT1G48000	53.947	76	35	0	1	76	60	135	1.77e-19	84.3
MS.gene000721.t1	AT4G13480	56.716	67	29	0	9	75	42	108	2.19e-19	84.3
MS.gene000721.t1	AT3G24310	54.930	71	32	0	9	79	54	124	3.05e-19	84.0
MS.gene000721.t1	AT1G17950	45.238	84	41	1	8	91	37	115	3.38e-19	83.6
MS.gene000721.t1	AT1G68320	58.209	67	28	0	9	75	55	121	4.61e-19	84.0
MS.gene000721.t1	AT1G25340	59.375	64	26	0	12	75	52	115	7.02e-19	83.2
MS.gene000721.t1	AT1G25340	59.375	64	26	0	12	75	52	115	9.68e-19	83.2
MS.gene000721.t1	AT3G29020	37.255	102	62	1	5	104	94	195	2.26e-18	81.3
MS.gene000721.t1	AT2G39880	51.471	68	33	0	8	75	82	149	2.86e-18	82.8
MS.gene000721.t1	AT3G29020	37.255	102	62	1	5	104	96	197	3.72e-18	81.6
MS.gene000721.t1	AT3G09230	46.250	80	43	0	5	84	84	163	5.07e-18	82.0
MS.gene000721.t1	AT5G17800	42.169	83	45	1	8	90	125	204	1.26e-17	80.5
MS.gene000721.t1	AT5G11510	43.662	71	40	0	9	79	114	184	2.83e-17	80.9
MS.gene000721.t1	AT5G11510	43.662	71	40	0	9	79	114	184	2.83e-17	80.9
MS.gene000721.t1	AT5G11510	43.662	71	40	0	9	79	114	184	2.83e-17	80.9
MS.gene000721.t1	AT1G73410	56.250	64	28	0	8	71	38	101	4.00e-17	77.8
MS.gene000721.t1	AT5G11510	43.662	71	40	0	9	79	114	184	4.05e-17	80.1
MS.gene000721.t1	AT5G11510	43.662	71	40	0	9	79	114	184	4.29e-17	80.1
MS.gene000721.t1	AT4G18770	45.946	74	40	0	8	81	249	322	5.09e-17	79.3
MS.gene000721.t1	AT4G33450	42.708	96	50	2	8	102	51	142	5.91e-17	77.4
MS.gene000721.t1	AT1G73410	56.250	64	28	0	8	71	38	101	6.84e-17	76.6
MS.gene000721.t1	AT3G55730	48.529	68	35	0	8	75	88	155	1.78e-16	77.8
MS.gene000721.t1	AT3G27785	41.250	80	47	0	7	86	220	299	5.50e-16	76.6
MS.gene000721.t1	AT5G40360	44.928	69	38	0	7	75	189	257	7.56e-16	75.9
MS.gene000721.t1	AT5G49620	51.316	76	37	0	1	76	54	129	8.52e-16	75.1
MS.gene000721.t1	AT3G06490	56.716	67	29	0	9	75	55	121	1.07e-15	75.1
MS.gene000721.t1	AT2G26950	45.763	59	32	0	13	71	56	114	1.43e-15	75.1
MS.gene000721.t1	AT4G37260	43.662	71	40	0	5	75	42	112	2.71e-15	73.9
MS.gene000721.t1	AT2G25230	42.029	69	40	0	7	75	57	125	3.29e-15	72.4
MS.gene000721.t1	AT5G67300	46.479	71	38	0	5	75	35	105	5.32e-15	72.8
MS.gene000721.t1	AT5G58850	36.782	87	55	0	1	87	130	216	8.07e-15	73.2
MS.gene000721.t1	AT5G02320	41.096	73	43	0	5	77	156	228	1.04e-14	73.2
MS.gene000721.t1	AT5G02320	41.096	73	43	0	5	77	156	228	1.04e-14	73.2
MS.gene000721.t1	AT4G32730	31.776	107	68	1	9	115	120	221	1.28e-14	72.8
MS.gene000721.t1	AT4G32730	31.776	107	68	1	9	115	120	221	1.28e-14	72.8
MS.gene000721.t1	AT4G32730	31.776	107	68	1	9	115	120	221	1.28e-14	72.8
MS.gene000721.t1	AT4G32730	31.776	107	68	1	9	115	120	221	1.28e-14	72.8
MS.gene000721.t1	AT4G32730	31.776	107	68	1	9	115	120	221	1.28e-14	72.8
MS.gene000721.t1	AT3G09370	43.662	71	40	0	5	75	164	234	1.34e-14	72.8
MS.gene000721.t1	AT3G09370	43.662	71	40	0	5	75	159	229	1.44e-14	72.4
MS.gene000721.t1	AT5G02320	41.096	73	43	0	5	77	96	168	1.44e-14	72.4
MS.gene000721.t1	AT5G11050	38.272	81	50	0	7	87	136	216	1.63e-14	72.4
MS.gene000721.t1	AT3G09370	43.662	71	40	0	5	75	172	242	1.87e-14	72.4
MS.gene000721.t1	AT1G18960	42.029	69	38	1	9	77	43	109	2.83e-14	70.9
MS.gene000721.t1	AT2G23290	43.662	71	40	0	5	75	42	112	3.08e-14	70.9
MS.gene000721.t1	AT3G60460	48.529	68	34	1	9	75	47	114	4.04e-14	70.5
MS.gene000721.t1	AT5G40430	39.130	69	42	0	7	75	84	152	4.78e-14	69.7
MS.gene000721.t1	AT5G39700	45.714	70	36	1	13	82	93	160	7.05e-14	68.2
MS.gene000721.t1	AT3G50060	34.906	106	61	1	5	102	35	140	8.25e-14	69.7
MS.gene000721.t1	AT2G37630	41.463	82	48	0	12	93	43	124	8.43e-13	67.0
MS.gene000721.t1	AT5G49620	43.333	90	37	1	1	76	54	143	2.30e-12	65.5
MS.gene000721.t1	AT4G00540	40.580	69	41	0	9	77	139	207	2.79e-12	65.9
MS.gene000721.t1	AT1G74650	61.364	44	17	0	38	81	1	44	2.85e-12	64.7
MS.gene000721.t1	AT4G00540	40.000	70	42	0	8	77	136	205	3.58e-12	65.5
MS.gene000721.t1	AT4G25560	59.091	44	18	0	32	75	3	46	5.23e-12	63.5
MS.gene000721.t1	AT1G66380	75.556	45	11	0	9	53	44	88	6.18e-12	60.8
MS.gene000721.t1	AT5G59780	55.319	47	21	0	35	81	5	51	8.16e-12	62.0
MS.gene000721.t1	AT3G46130	55.319	47	21	0	35	81	5	51	1.29e-11	62.0
MS.gene000721.t1	AT3G28910	62.500	40	15	0	38	77	1	40	2.74e-11	62.0
MS.gene000721.t1	AT4G01060	51.282	39	19	0	31	69	35	73	4.26e-11	57.8
MS.gene000721.t1	AT4G01060	51.282	39	19	0	31	69	32	70	4.81e-11	57.4
MS.gene000721.t1	AT4G01060	50.000	40	20	0	30	69	32	71	6.72e-11	57.0

Find 42 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCATTCACCATGGTTAAA+TGG	0.170730	5.4:-55937047	MS.gene000721:CDS
AAAGTTATCAACATTTAATT+TGG	0.172381	5.4:+55936797	None:intergenic
GTACTGTCGGTGATGGCTTC+TGG	0.187087	5.4:-55936758	MS.gene000721:CDS
TTTAGATGATATCTTAAATT+AGG	0.200033	5.4:-55936706	None:intergenic
CACACATTTGCGCAAGAATA+TGG	0.270216	5.4:-55937162	MS.gene000721:CDS
CAATCTCCATCAACATTAAT+TGG	0.275334	5.4:+55936936	None:intergenic
CTAATGATGTGAAGAATTAT+TGG	0.279813	5.4:-55937187	MS.gene000721:CDS
ATTCTACCAATTAATGTTGA+TGG	0.309304	5.4:-55936942	MS.gene000721:CDS
TGAGTTTGCATGCTTTCTTT+AGG	0.316758	5.4:+55937104	None:intergenic
TACTGTCGGTGATGGCTTCT+GGG	0.330685	5.4:-55936757	MS.gene000721:CDS
TTGATTGCTGCAAGACTTCC+GGG	0.345324	5.4:-55937218	MS.gene000721:CDS
ATGAAGTTGATATGATTCTA+AGG	0.352752	5.4:-55937995	MS.gene000721:CDS
CATTATATACCTGCTCTTTG+TGG	0.372515	5.4:+55938235	None:intergenic
CTCATTCACCATGGTTAAAT+GGG	0.379865	5.4:-55937046	MS.gene000721:CDS
ATTGATTGCTGCAAGACTTC+CGG	0.392491	5.4:-55937219	MS.gene000721:CDS
TTTGTTGAAACCGTCACTAT+TGG	0.404174	5.4:+55937002	None:intergenic
TTTAATTTGGAATATTCCTC+TGG	0.409911	5.4:+55936810	None:intergenic
GAAGCCATCACCGACAGTAC+TGG	0.437278	5.4:+55936761	None:intergenic
TACACAAGCTCCTAGGAAAC+AGG	0.453563	5.4:-55937971	MS.gene000721:intron
AACGTGAGCAATGACAAAAT+TGG	0.485163	5.4:-55936852	MS.gene000721:CDS
GTTGATAACTTTCTTACTGA+AGG	0.494299	5.4:-55936786	MS.gene000721:CDS
AAGAGAGTCAAATTCACAAA+TGG	0.496518	5.4:+55936728	None:intergenic
AGCATACATACCTGTTTCCT+AGG	0.499222	5.4:+55937961	None:intergenic
CTAAGGTTACACAAGCTCCT+AGG	0.501800	5.4:-55937978	MS.gene000721:CDS
AAAACTTTCTCTATTGATGG+TGG	0.518195	5.4:+55938025	None:intergenic
AAACTTTCTCTATTGATGGT+GGG	0.522978	5.4:+55938026	None:intergenic
GTCGGAAAAGTTGTAGATTG+AGG	0.545982	5.4:-55938067	MS.gene000721:CDS
CATTTAGTTCCACAAAGAGC+AGG	0.555403	5.4:-55938244	MS.gene000721:intron
CAACCGTGTCTTCCATGTGG+TGG	0.559880	5.4:-55936887	MS.gene000721:CDS
AAGCCATCACCGACAGTACT+GGG	0.562213	5.4:+55936762	None:intergenic
AACCGTGTCTTCCATGTGGT+GGG	0.571636	5.4:-55936886	MS.gene000721:CDS
GGACCCAGTACTGTCGGTGA+TGG	0.574154	5.4:-55936765	MS.gene000721:CDS
ACATCATTAGCTGTTCTACC+CGG	0.596176	5.4:+55937200	None:intergenic
CTCCCACCACATGGAAGACA+CGG	0.597007	5.4:+55936884	None:intergenic
TTATATTTCCCATTTAACCA+TGG	0.601242	5.4:+55937038	None:intergenic
ATTTGTCACACCAATAGTGA+CGG	0.606503	5.4:-55937012	MS.gene000721:CDS
CAACAAACTCTCCCACCACA+TGG	0.617722	5.4:+55936875	None:intergenic
GGAAAAGTTGTAGATTGAGG+TGG	0.624177	5.4:-55938064	MS.gene000721:CDS
ATGCTCTTTACTATTACCAG+AGG	0.637280	5.4:-55936826	MS.gene000721:CDS
ACTGAAGGACCCAGTACTGT+CGG	0.653910	5.4:-55936771	MS.gene000721:CDS
GTGACGGTTTCAACAAACGA+TGG	0.707992	5.4:-55936996	MS.gene000721:CDS
ATTCAACCGTGTCTTCCATG+TGG	0.728421	5.4:-55936890	MS.gene000721:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AACAAATAATCTTATATTTA+AGG	+	chr5.4:55937100-55937119	None:intergenic	10.0%
!!	AAAGTTATCAACATTTAATT+TGG	+	chr5.4:55938161-55938180	None:intergenic	15.0%
!!	GTGAAATATTATTAATAAAG+TGG	+	chr5.4:55937228-55937247	None:intergenic	15.0%
!!	TAAATGAGTATAAAAAGTTT+GGG	-	chr5.4:55937557-55937576	MS.gene000721:intron	15.0%
!!	TATTAATCAAAGGTTTATTT+GGG	+	chr5.4:55937344-55937363	None:intergenic	15.0%
!!	TATTCTTAAAATAGTTTAAG+TGG	+	chr5.4:55937660-55937679	None:intergenic	15.0%
!!	TTAAATGAGTATAAAAAGTT+TGG	-	chr5.4:55937556-55937575	MS.gene000721:intron	15.0%
!!	AATAAAGTGGCATTATATAT+TGG	+	chr5.4:55937215-55937234	None:intergenic	20.0%
!!	CTAAGAGATATTCATAAAAA+AGG	-	chr5.4:55937386-55937405	MS.gene000721:intron	20.0%
!!	GTATTAATCAAAGGTTTATT+TGG	+	chr5.4:55937345-55937364	None:intergenic	20.0%
!!	TAACTAGTAGTATTAATCAA+AGG	+	chr5.4:55937354-55937373	None:intergenic	20.0%
!!	TATCTAATTAAATGACAACT+TGG	+	chr5.4:55937027-55937046	None:intergenic	20.0%
!!	TGCTTATTGTATTGTATATT+TGG	-	chr5.4:55936748-55936767	MS.gene000721:CDS	20.0%
!!!	ATTTAAAATCTGTCCTTTTT+AGG	+	chr5.4:55937291-55937310	None:intergenic	20.0%
!!!	TTTAAAATCTGTCCTTTTTA+GGG	+	chr5.4:55937290-55937309	None:intergenic	20.0%
!	AGAAAAACTTTCTCTATTGA+TGG	+	chr5.4:55936936-55936955	None:intergenic	25.0%
!	ATTCTACCAATTAATGTTGA+TGG	-	chr5.4:55938013-55938032	MS.gene000721:CDS	25.0%
!	CTAATGATGTGAAGAATTAT+TGG	-	chr5.4:55937768-55937787	MS.gene000721:intron	25.0%
!	TTATATTTCCCATTTAACCA+TGG	+	chr5.4:55937920-55937939	None:intergenic	25.0%
!!	AATAAAGAAGAAAAGTGTGA+TGG	-	chr5.4:55937474-55937493	MS.gene000721:intron	25.0%
!!	ATAAAGAAGAAAAGTGTGAT+GGG	-	chr5.4:55937475-55937494	MS.gene000721:intron	25.0%
!!	CAAAATTCAAATTTTCTCGA+AGG	-	chr5.4:55937174-55937193	MS.gene000721:CDS	25.0%
!!!	ATGAAGTTGATATGATTCTA+AGG	-	chr5.4:55936960-55936979	MS.gene000721:CDS	25.0%
!!!	TGTCTTTTTTTTCCCTAAAA+AGG	-	chr5.4:55937275-55937294	MS.gene000721:intron	25.0%
!!!	TTTAATTTGGAATATTCCTC+TGG	+	chr5.4:55938148-55938167	None:intergenic	25.0%
	AAAACTTTCTCTATTGATGG+TGG	+	chr5.4:55936933-55936952	None:intergenic	30.0%
	AAGAGAGTCAAATTCACAAA+TGG	+	chr5.4:55938230-55938249	None:intergenic	30.0%
	ACAAGTGTCTTAAAATATGG+GGG	-	chr5.4:55937409-55937428	MS.gene000721:intron	30.0%
	AGGACAAGTGTCTTAAAATA+TGG	-	chr5.4:55937406-55937425	MS.gene000721:intron	30.0%
	ATGTACTTGCAGGATTAAAT+AGG	-	chr5.4:55936864-55936883	MS.gene000721:CDS	30.0%
	CAATCTCCATCAACATTAAT+TGG	+	chr5.4:55938022-55938041	None:intergenic	30.0%
	GACAAGTGTCTTAAAATATG+GGG	-	chr5.4:55937408-55937427	MS.gene000721:intron	30.0%
	GGACAAGTGTCTTAAAATAT+GGG	-	chr5.4:55937407-55937426	MS.gene000721:intron	30.0%
!	AAACTTTCTCTATTGATGGT+GGG	+	chr5.4:55936932-55936951	None:intergenic	30.0%
!	AATTCAAATTTTCTCGAAGG+TGG	-	chr5.4:55937177-55937196	MS.gene000721:CDS	30.0%
!	ATTCAAATTTTCTCGAAGGT+GGG	-	chr5.4:55937178-55937197	MS.gene000721:CDS	30.0%
!	CAATAGAGAAAGTTTTTCTG+AGG	-	chr5.4:55936937-55936956	MS.gene000721:CDS	30.0%
!!	ACGGTTGAATTTTCAAGATA+TGG	+	chr5.4:55938055-55938074	None:intergenic	30.0%
!!	ATTTTCAAGATATGGTTGTG+CGG	+	chr5.4:55938047-55938066	None:intergenic	30.0%
!!	GTTGATAACTTTCTTACTGA+AGG	-	chr5.4:55938169-55938188	MS.gene000721:intron	30.0%
!!!	AGCTTGTTTTGTAATCTGAA+GGG	-	chr5.4:55937150-55937169	MS.gene000721:CDS	30.0%
	AACGTGAGCAATGACAAAAT+TGG	-	chr5.4:55938103-55938122	MS.gene000721:intron	35.0%
	ATGCTCTTTACTATTACCAG+AGG	-	chr5.4:55938129-55938148	MS.gene000721:intron	35.0%
	ATTAAATGACAACTTGGCCT+TGG	+	chr5.4:55937021-55937040	None:intergenic	35.0%
	ATTTGTCACACCAATAGTGA+CGG	-	chr5.4:55937943-55937962	MS.gene000721:intron	35.0%
	CATTATATACCTGCTCTTTG+TGG	+	chr5.4:55936723-55936742	None:intergenic	35.0%
	CTCATTCACCATGGTTAAAT+GGG	-	chr5.4:55937909-55937928	MS.gene000721:intron	35.0%
	GAATGAGATGAAAAAGTTCG+AGG	+	chr5.4:55937896-55937915	None:intergenic	35.0%
	TCTCATTCACCATGGTTAAA+TGG	-	chr5.4:55937908-55937927	MS.gene000721:intron	35.0%
	TGAGTTTGCATGCTTTCTTT+AGG	+	chr5.4:55937854-55937873	None:intergenic	35.0%
	TGGGGGAAGTCAATATTAAA+TGG	-	chr5.4:55937426-55937445	MS.gene000721:intron	35.0%
	TTGCAGGATTAAATAGGTGT+CGG	-	chr5.4:55936870-55936889	MS.gene000721:CDS	35.0%
	TTTGTTGAAACCGTCACTAT+TGG	+	chr5.4:55937956-55937975	None:intergenic	35.0%
!	TACTTGTTACATGTACTTGC+AGG	-	chr5.4:55936854-55936873	MS.gene000721:CDS	35.0%
!!	CTTTTTCATCTCATTCACCA+TGG	-	chr5.4:55937900-55937919	MS.gene000721:intron	35.0%
!!!	GAGCTTGTTTTGTAATCTGA+AGG	-	chr5.4:55937149-55937168	MS.gene000721:CDS	35.0%
	ACATCATTAGCTGTTCTACC+CGG	+	chr5.4:55937758-55937777	None:intergenic	40.0%
	AGCATACATACCTGTTTCCT+AGG	+	chr5.4:55936997-55937016	None:intergenic	40.0%
	ATTGATTGCTGCAAGACTTC+CGG	-	chr5.4:55937736-55937755	MS.gene000721:intron	40.0%
	CACACATTTGCGCAAGAATA+TGG	-	chr5.4:55937793-55937812	MS.gene000721:intron	40.0%
	GATGAAAAAGTTCGAGGTTG+AGG	+	chr5.4:55937890-55937909	None:intergenic	40.0%
	GGAAAAGTTGTAGATTGAGG+TGG	-	chr5.4:55936891-55936910	MS.gene000721:CDS	40.0%
	GTCGGAAAAGTTGTAGATTG+AGG	-	chr5.4:55936888-55936907	MS.gene000721:CDS	40.0%
!	CATTTAGTTCCACAAAGAGC+AGG	-	chr5.4:55936711-55936730	MS.gene000721:CDS	40.0%
	AACAGGTATGTATGCTGCCA+AGG	-	chr5.4:55937001-55937020	MS.gene000721:CDS	45.0%
	ATTCAACCGTGTCTTCCATG+TGG	-	chr5.4:55938065-55938084	MS.gene000721:CDS	45.0%
	CTAAGGTTACACAAGCTCCT+AGG	-	chr5.4:55936977-55936996	MS.gene000721:CDS	45.0%
	GTGACGGTTTCAACAAACGA+TGG	-	chr5.4:55937959-55937978	MS.gene000721:intron	45.0%
	TACACAAGCTCCTAGGAAAC+AGG	-	chr5.4:55936984-55937003	MS.gene000721:CDS	45.0%
	TTGATTGCTGCAAGACTTCC+GGG	-	chr5.4:55937737-55937756	MS.gene000721:intron	45.0%
!!!	TATTTTTATATTTTTATAGA+TGG	-	chr5.4:55937711-55937730	MS.gene000721:intron	5.0%
	AACCGTGTCTTCCATGTGGT+GGG	-	chr5.4:55938069-55938088	MS.gene000721:CDS	50.0%
	AAGCCATCACCGACAGTACT+GGG	+	chr5.4:55938196-55938215	None:intergenic	50.0%
	ACTGAAGGACCCAGTACTGT+CGG	-	chr5.4:55938184-55938203	MS.gene000721:intron	50.0%
	CAACAAACTCTCCCACCACA+TGG	+	chr5.4:55938083-55938102	None:intergenic	50.0%
!	TACTGTCGGTGATGGCTTCT+GGG	-	chr5.4:55938198-55938217	MS.gene000721:intron	50.0%
	CAACCGTGTCTTCCATGTGG+TGG	-	chr5.4:55938068-55938087	MS.gene000721:CDS	55.0%
	CTCCCACCACATGGAAGACA+CGG	+	chr5.4:55938074-55938093	None:intergenic	55.0%
	GAAGCCATCACCGACAGTAC+TGG	+	chr5.4:55938197-55938216	None:intergenic	55.0%
!	GTACTGTCGGTGATGGCTTC+TGG	-	chr5.4:55938197-55938216	MS.gene000721:intron	55.0%
	GGACCCAGTACTGTCGGTGA+TGG	-	chr5.4:55938190-55938209	MS.gene000721:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	55936707	55938270	55936707	ID=MS.gene000721
chr5.4	mRNA	55936707	55938270	55936707	ID=MS.gene000721.t1;Parent=MS.gene000721
chr5.4	exon	55938245	55938270	55938245	ID=MS.gene000721.t1.exon1;Parent=MS.gene000721.t1
chr5.4	CDS	55938245	55938270	55938245	ID=cds.MS.gene000721.t1;Parent=MS.gene000721.t1
chr5.4	exon	55937972	55938091	55937972	ID=MS.gene000721.t1.exon2;Parent=MS.gene000721.t1
chr5.4	CDS	55937972	55938091	55937972	ID=cds.MS.gene000721.t1;Parent=MS.gene000721.t1
chr5.4	exon	55936707	55937247	55936707	ID=MS.gene000721.t1.exon3;Parent=MS.gene000721.t1
chr5.4	CDS	55936707	55937247	55936707	ID=cds.MS.gene000721.t1;Parent=MS.gene000721.t1

Gene Sequence

>MS.gene000721

ATGGCATTTAGTTCCACAAAGAGCAGGTATATAATGAAAGTTGCTTATTGTATTGTATATTTGGCTTATAATTAATTAAACTGAATAATAACATAGAAGCAAATGTTACTTATAATTCATTTTCTTTATGTATGTGAAAACTGAAAATACTTGTTACATGTACTTGCAGGATTAAATAGGTGTCGGAAAAGTTGTAGATTGAGGTGGTTAAATTATTTAAATCCCACCATCAATAGAGAAAGTTTTTCTGAGGATGAAGTTGATATGATTCTAAGGTTACACAAGCTCCTAGGAAACAGGTATGTATGCTGCCAAGGCCAAGTTGTCATTTAATTAGATATTTTCTTATAATTCAATTTTAGCTGTTATTATATTCTTAATATTATGTTTCCTTAAATATAAGATTATTTGTTCATAAAGTGAAGTGTAATCTTAGTAGTATGAGCTTGTTTTGTAATCTGAAGGGTCAAAATTCAAATTTTCTCGAAGGTGGGTGTGAAAAAGACCAATATATAATGCCACTTTATTAATAATATTTCACTTGCTTAATTTTTATAAAAAAAGTATGTGTCTTTTTTTTCCCTAAAAAGGACAGATTTTAAATTACTAGATAGTACATACAACTAATTTTTTTCCCAAATAAACCTTTGATTAATACTACTAGTTAAGTGTCTTAGATCTAAGAGATATTCATAAAAAAGGACAAGTGTCTTAAAATATGGGGGAAGTCAATATTAAATGGAGAATGTTTAGTGTACATAAAGAAAAATAAAGAAGAAAAGTGTGATGGGATCGATGTAATATGTTGATGATGTGATAAGATGAACGAGATAGAGATACAATAAAATATTAAATGAGTATAAAAAGTTTGGGTGTTCAATATCATTATTGATATTAAATACATAAAGTTATAAAATAGTATTTCAAGATTTTTATAAAAAAGAATGTTACCACTTAAACTATTTTAAGAATAATTTAATTTTATGAAGTACTAGTTAACATAATATTTTTATATTTTTATAGATGGTCATTGATTGCTGCAAGACTTCCGGGTAGAACAGCTAATGATGTGAAGAATTATTGGCACACACATTTGCGCAAGAATATGGTTTCAAGAAAAGAAGAAAAGAAAGAAAATGAGAAACCTAAAGAAAGCATGCAAACTCATGAAGTGATTAAACCTCAACCTCGAACTTTTTCATCTCATTCACCATGGTTAAATGGGAAATATAATAAATTTGTCACACCAATAGTGACGGTTTCAACAAACGATGGTACTGTTGCAAAAGATAGTGAAGTAGATACTATTCTACCAATTAATGTTGATGGAGATTGTGCCGCACAACCATATCTTGAAAATTCAACCGTGTCTTCCATGTGGTGGGAGAGTTTGTTGAACGTGAGCAATGACAAAATTGGATCATGCTCTTTACTATTACCAGAGGAATATTCCAAATTAAATGTTGATAACTTTCTTACTGAAGGACCCAGTACTGTCGGTGATGGCTTCTGGGATTCTACCATTTGTGAATTTGACTCTCTTTTAGATGATATCTTAAATTAG

Protein sequence

>MS.gene000721.t1

MAFSSTKSRCRKSCRLRWLNYLNPTINRESFSEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLRKNMVSRKEEKKENEKPKESMQTHEVIKPQPRTFSSHSPWLNGKYNKFVTPIVTVSTNDGTVAKDSEVDTILPINVDGDCAAQPYLENSTVSSMWWESLLNVSNDKIGSCSLLLPEEYSKLNVDNFLTEGPSTVGDGFWDSTICEFDSLLDDILN