AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017438

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017438.t1 MTR_5g078800 87.266 267 24 3 1 259 1 265 9.00e-158 439
MS.gene017438.t1 MTR_5g078860 72.727 308 33 4 1 259 1 306 3.23e-145 409
MS.gene017438.t1 MTR_5g079220 65.882 255 71 7 3 251 17 261 1.71e-103 302
MS.gene017438.t1 MTR_5g079290 59.387 261 84 4 1 253 11 257 4.27e-100 293
MS.gene017438.t1 MTR_7g017260 59.623 265 86 10 1 252 19 275 1.47e-94 279
MS.gene017438.t1 MTR_5g079120 58.984 256 88 6 1 253 55 296 9.38e-94 278
MS.gene017438.t1 MTR_0001s0360 57.854 261 84 7 1 253 1 243 1.35e-92 273
MS.gene017438.t1 MTR_5g078950 54.615 260 91 5 1 239 1 254 5.20e-90 267
MS.gene017438.t1 MTR_8g060940 60.630 254 78 6 1 253 1 233 3.06e-88 262
MS.gene017438.t1 MTR_5g078910 52.265 287 83 7 1 237 1 283 2.89e-81 246
MS.gene017438.t1 MTR_5g078930 56.118 237 69 6 1 228 3 213 9.01e-79 237
MS.gene017438.t1 MTR_0193s0090 57.576 198 71 4 1 197 1 186 4.08e-67 207
MS.gene017438.t1 MTR_0247s0040 74.324 148 35 1 1 148 1 145 4.58e-66 203
MS.gene017438.t1 MTR_0197s0010 47.179 195 88 3 11 197 5 192 6.13e-55 177
MS.gene017438.t1 MTR_4g125520 54.422 147 64 1 6 152 11 154 2.25e-48 162
MS.gene017438.t1 MTR_3g083540 63.551 107 39 0 6 112 40 146 7.01e-45 153
MS.gene017438.t1 MTR_7g115650 64.151 106 38 0 6 111 11 116 9.60e-45 150
MS.gene017438.t1 MTR_0023s0210 79.518 83 17 0 1 83 1 83 3.46e-44 144
MS.gene017438.t1 MTR_0251s0050 57.600 125 53 0 2 126 8 132 5.59e-44 150
MS.gene017438.t1 MTR_0008s0470 49.007 151 70 1 2 145 8 158 8.18e-44 150
MS.gene017438.t1 MTR_0008s0390 50.000 144 70 1 2 145 8 149 5.47e-43 147
MS.gene017438.t1 MTR_8g020490 64.762 105 37 0 7 111 8 112 1.09e-42 146
MS.gene017438.t1 MTR_7g096930 52.713 129 61 0 6 134 11 139 1.88e-42 146
MS.gene017438.t1 MTR_1g076150 53.543 127 56 1 6 132 11 134 7.38e-42 144
MS.gene017438.t1 MTR_1g043050 56.757 111 48 0 5 115 10 120 8.32e-42 144
MS.gene017438.t1 MTR_1g043080 56.481 108 47 0 5 112 10 117 1.05e-41 143
MS.gene017438.t1 MTR_8g027345 61.321 106 41 0 6 111 11 116 1.27e-41 144
MS.gene017438.t1 MTR_7g117730 60.377 106 42 0 6 111 11 116 1.35e-41 143
MS.gene017438.t1 MTR_5g079670 60.377 106 42 0 7 112 11 116 1.92e-41 141
MS.gene017438.t1 MTR_1g100653 59.434 106 43 0 6 111 11 116 4.96e-41 143
MS.gene017438.t1 MTR_4g100720 60.526 114 43 1 7 118 13 126 5.08e-41 139
MS.gene017438.t1 MTR_4g091490 57.658 111 47 0 2 112 8 118 6.21e-41 144
MS.gene017438.t1 MTR_2g089450 49.640 139 68 2 6 144 11 147 7.90e-41 141
MS.gene017438.t1 MTR_5g029840 61.682 107 41 0 6 112 11 117 9.79e-41 143
MS.gene017438.t1 MTR_3g077110 39.286 224 114 6 7 212 12 231 1.04e-40 143
MS.gene017438.t1 MTR_2g011660 57.658 111 47 0 2 112 8 118 1.10e-40 143
MS.gene017438.t1 MTR_4g073420 59.615 104 42 0 9 112 14 117 4.56e-40 140
MS.gene017438.t1 MTR_3g074520 58.879 107 44 0 6 112 11 117 1.75e-39 140
MS.gene017438.t1 MTR_2g089620 58.879 107 44 0 6 112 11 117 1.89e-39 139
MS.gene017438.t1 MTR_3g039990 51.163 129 63 0 6 134 12 140 4.47e-39 138
MS.gene017438.t1 MTR_7g110830 39.706 204 98 3 7 185 12 215 5.00e-39 139
MS.gene017438.t1 MTR_7g010210 57.547 106 45 0 6 111 11 116 1.18e-38 137
MS.gene017438.t1 MTR_3g097450 48.936 141 69 1 9 149 14 151 1.54e-38 136
MS.gene017438.t1 MTR_7g010210 57.547 106 45 0 6 111 11 116 1.55e-38 135
MS.gene017438.t1 MTR_4g082230 59.091 110 44 1 2 111 8 116 3.40e-38 138
MS.gene017438.t1 MTR_4g478180 57.009 107 46 0 6 112 12 118 3.95e-38 137
MS.gene017438.t1 MTR_4g485530 59.434 106 43 0 9 114 14 119 3.98e-38 132
MS.gene017438.t1 MTR_1g085640 59.048 105 43 0 7 111 12 116 6.07e-38 137
MS.gene017438.t1 MTR_3g461490 59.048 105 43 0 7 111 12 116 6.19e-38 135
MS.gene017438.t1 MTR_4g105130 48.276 145 58 2 7 134 12 156 6.35e-38 136
MS.gene017438.t1 MTR_4g082290 58.491 106 44 0 6 111 11 116 7.12e-38 137
MS.gene017438.t1 MTR_5g007370 55.140 107 48 0 6 112 11 117 7.59e-38 135
MS.gene017438.t1 MTR_1g112760 46.795 156 65 4 7 148 13 164 9.31e-38 132
MS.gene017438.t1 MTR_2g034790 55.660 106 47 0 6 111 11 116 1.55e-37 135
MS.gene017438.t1 MTR_8g017440 57.143 105 45 0 7 111 12 116 1.81e-37 135
MS.gene017438.t1 MTR_2g089420 53.271 107 50 0 6 112 10 116 1.96e-37 137
MS.gene017438.t1 MTR_8g017540 54.630 108 49 0 5 112 56 163 2.47e-37 135
MS.gene017438.t1 MTR_6g009430 56.604 106 46 0 7 112 12 117 2.52e-37 134
MS.gene017438.t1 MTR_7g011170 56.075 107 47 0 6 112 11 117 6.96e-37 132
MS.gene017438.t1 MTR_0140s0030 52.174 115 55 0 6 120 12 126 1.10e-36 132
MS.gene017438.t1 MTR_0489s0020 52.174 115 55 0 6 120 12 126 1.10e-36 132
MS.gene017438.t1 MTR_4g121460 54.717 106 48 0 6 111 11 116 1.25e-36 132
MS.gene017438.t1 MTR_0008s0280 48.148 135 67 2 6 137 11 145 1.35e-36 129
MS.gene017438.t1 MTR_1g100667 52.846 123 57 1 1 122 6 128 1.49e-36 130
MS.gene017438.t1 MTR_7g087130 55.660 106 47 0 6 111 11 116 1.96e-36 132
MS.gene017438.t1 MTR_6g012690 56.604 106 46 0 6 111 11 116 2.04e-36 132
MS.gene017438.t1 MTR_1g085040 57.143 105 45 0 7 111 12 116 3.09e-36 132
MS.gene017438.t1 MTR_8g095390 55.340 103 46 0 9 111 14 116 4.44e-36 130
MS.gene017438.t1 MTR_6g055910 55.046 109 49 0 8 116 15 123 4.76e-36 129
MS.gene017438.t1 MTR_6g012180 59.000 100 41 0 6 105 11 110 9.79e-36 129
MS.gene017438.t1 MTR_5g014990 50.847 118 57 1 7 123 12 129 2.35e-35 128
MS.gene017438.t1 MTR_8g017500 53.271 107 50 0 5 111 10 116 2.85e-35 129
MS.gene017438.t1 MTR_0063s0090 53.398 103 48 0 6 108 11 113 2.86e-35 126
MS.gene017438.t1 MTR_7g076740 46.043 139 72 2 5 140 10 148 3.14e-35 128
MS.gene017438.t1 MTR_1g017140 49.573 117 58 1 7 122 12 128 3.62e-35 129
MS.gene017438.t1 MTR_2g099740 53.704 108 50 0 5 112 10 117 4.06e-35 130
MS.gene017438.t1 MTR_5g042030 51.786 112 54 0 1 112 1 112 4.94e-35 127
MS.gene017438.t1 MTR_8g031360 54.630 108 48 1 6 112 12 119 6.91e-35 127
MS.gene017438.t1 MTR_3g103570 46.154 130 68 2 7 135 12 140 9.71e-35 127
MS.gene017438.t1 MTR_1g017000 52.336 107 50 1 7 112 12 118 1.05e-34 125
MS.gene017438.t1 MTR_8g017390 55.140 107 47 1 7 112 12 118 1.51e-34 129
MS.gene017438.t1 MTR_2g097910 53.333 105 49 0 7 111 20 124 2.12e-34 126
MS.gene017438.t1 MTR_4g065017 54.286 105 48 0 7 111 17 121 4.45e-34 125
MS.gene017438.t1 MTR_4g102380 55.140 107 48 0 6 112 11 117 4.68e-34 124
MS.gene017438.t1 MTR_8g098860 52.381 105 50 0 7 111 12 116 5.56e-34 125
MS.gene017438.t1 MTR_2g064160 50.000 108 54 0 7 114 11 118 6.08e-34 125
MS.gene017438.t1 MTR_7g111290 60.204 98 39 0 7 104 12 109 7.28e-34 126
MS.gene017438.t1 MTR_6g090405 54.206 107 48 1 7 112 12 118 7.73e-34 123
MS.gene017438.t1 MTR_1g110460 54.286 105 48 0 7 111 26 130 9.46e-34 124
MS.gene017438.t1 MTR_8g017340 53.271 107 49 1 7 112 12 118 2.10e-33 126
MS.gene017438.t1 MTR_7g102110 55.140 107 47 1 7 112 12 118 2.34e-33 122
MS.gene017438.t1 MTR_4g057635 55.140 107 47 1 7 112 12 118 2.76e-33 123
MS.gene017438.t1 MTR_3g052430 50.962 104 51 0 7 110 41 144 4.96e-33 126
MS.gene017438.t1 MTR_3g028740 52.381 105 50 0 7 111 22 126 6.08e-33 123
MS.gene017438.t1 MTR_3g052450 50.962 104 51 0 7 110 40 143 6.67e-33 125
MS.gene017438.t1 MTR_2g096380 51.376 109 53 0 7 115 6 114 7.15e-33 120
MS.gene017438.t1 MTR_7g035075 49.573 117 57 1 7 123 14 128 1.43e-32 118
MS.gene017438.t1 MTR_8g017350 52.336 107 50 1 7 112 12 118 1.45e-32 125
MS.gene017438.t1 MTR_1g073170 50.407 123 58 1 8 130 21 140 2.40e-32 119
MS.gene017438.t1 MTR_5g078140 54.717 106 48 0 6 111 11 116 2.99e-32 120
MS.gene017438.t1 MTR_3g065440 54.717 106 48 0 6 111 11 116 4.10e-32 120
MS.gene017438.t1 MTR_3g011610 49.524 105 53 0 7 111 37 141 5.18e-32 123
MS.gene017438.t1 MTR_2g095520 57.000 100 42 1 7 105 12 111 6.02e-32 120
MS.gene017438.t1 MTR_2g067420 52.525 99 47 0 7 105 14 112 8.02e-32 119
MS.gene017438.t1 MTR_1g045610 49.593 123 59 1 8 130 22 141 8.57e-32 118
MS.gene017438.t1 MTR_4g097570 54.545 99 44 1 7 104 12 110 1.31e-31 118
MS.gene017438.t1 MTR_7g109320 35.681 213 103 4 6 185 11 222 1.37e-31 119
MS.gene017438.t1 MTR_1g086510 51.818 110 53 0 2 111 16 125 1.44e-31 117
MS.gene017438.t1 MTR_5g010020 52.525 99 47 0 7 105 12 110 1.86e-31 119
MS.gene017438.t1 MTR_8g042410 50.459 109 52 1 4 110 32 140 3.05e-31 121
MS.gene017438.t1 MTR_4g063100 49.074 108 55 0 8 115 8 115 3.28e-31 116
MS.gene017438.t1 MTR_6g006030 51.429 105 51 0 7 111 14 118 8.21e-31 114
MS.gene017438.t1 MTR_1g062940 48.649 111 57 0 7 117 6 116 2.01e-30 113
MS.gene017438.t1 MTR_4g128670 54.000 100 45 1 7 105 12 111 2.18e-30 116
MS.gene017438.t1 MTR_2g088170 49.524 105 53 0 6 110 28 132 3.73e-30 117
MS.gene017438.t1 MTR_4g097570 54.000 100 44 2 7 104 12 111 5.48e-30 114
MS.gene017438.t1 MTR_1g086530 48.182 110 57 0 2 111 28 137 1.35e-29 112
MS.gene017438.t1 MTR_1g021230 48.077 104 54 0 7 110 57 160 8.64e-29 113
MS.gene017438.t1 MTR_1g083630 46.296 108 58 0 4 111 9 116 6.76e-28 112
MS.gene017438.t1 MTR_5g079140 42.857 154 53 5 84 228 7 134 1.28e-27 103
MS.gene017438.t1 MTR_0023s0260 41.279 172 84 8 91 251 10 175 3.78e-26 100
MS.gene017438.t1 MTR_3g045430 42.727 110 63 0 2 111 8 117 4.65e-26 103
MS.gene017438.t1 MTR_5g088080 46.154 104 55 1 7 109 12 115 5.57e-26 102
MS.gene017438.t1 MTR_5g088150 46.154 104 55 1 7 109 12 115 5.57e-26 102
MS.gene017438.t1 MTR_5g488210 46.154 104 55 1 7 109 12 115 5.57e-26 102
MS.gene017438.t1 MTR_5g488170 46.154 104 55 1 7 109 12 115 6.05e-26 102
MS.gene017438.t1 MTR_5g088640 46.154 104 55 1 7 109 12 115 7.44e-26 102
MS.gene017438.t1 MTR_2g033170 50.485 103 51 0 7 109 24 126 9.33e-26 103
MS.gene017438.t1 MTR_5g062790 46.154 104 55 1 7 109 9 112 1.19e-25 102
MS.gene017438.t1 MTR_6g055910 57.143 77 33 0 40 116 18 94 1.28e-25 101
MS.gene017438.t1 MTR_5g007300 56.410 78 34 0 6 83 63 140 3.74e-25 97.4
MS.gene017438.t1 MTR_4g019370 41.379 116 67 1 9 124 38 152 3.93e-25 102
MS.gene017438.t1 MTR_4g123040 48.148 108 56 0 2 109 19 126 2.08e-24 99.8
MS.gene017438.t1 MTR_4g094982 44.118 102 56 1 9 110 5 105 3.62e-24 98.2
MS.gene017438.t1 MTR_5g088610 45.192 104 56 1 7 109 9 112 7.32e-24 99.0
MS.gene017438.t1 MTR_7g111290 63.636 66 24 0 39 104 2 67 3.41e-23 96.7
MS.gene017438.t1 MTR_5g049190 42.308 104 59 1 7 110 17 119 3.52e-23 94.7
MS.gene017438.t1 MTR_2g096380 57.143 77 33 0 39 115 19 95 3.96e-23 94.4
MS.gene017438.t1 MTR_7g037260 42.202 109 62 1 7 115 143 250 4.57e-23 96.7
MS.gene017438.t1 MTR_8g006470 44.231 104 57 1 7 109 10 113 1.01e-22 94.7
MS.gene017438.t1 MTR_5g016510 42.157 102 58 1 9 110 5 105 1.03e-22 95.1
MS.gene017438.t1 MTR_4g029540 37.857 140 78 3 2 132 4 143 1.98e-22 94.0
MS.gene017438.t1 MTR_3g101290 42.718 103 58 1 9 111 37 138 2.45e-22 92.4
MS.gene017438.t1 MTR_4g063100 54.545 77 35 0 39 115 10 86 3.05e-22 92.0
MS.gene017438.t1 MTR_1g026870 40.777 103 60 1 9 111 85 186 3.28e-22 95.9
MS.gene017438.t1 MTR_1g026870 29.851 134 86 3 4 136 28 154 1.05e-11 65.1
MS.gene017438.t1 MTR_4g128190 38.406 138 65 4 5 135 9 133 5.40e-22 91.7
MS.gene017438.t1 MTR_3g089045 35.915 142 85 2 2 143 9 144 6.61e-22 92.4
MS.gene017438.t1 MTR_4g082040 42.157 102 58 1 9 110 105 205 8.08e-22 94.0
MS.gene017438.t1 MTR_7g061330 43.689 103 57 1 9 111 113 214 8.41e-22 94.7
MS.gene017438.t1 MTR_7g461410 43.689 103 57 1 9 111 113 214 8.41e-22 94.7
MS.gene017438.t1 MTR_4g105660 42.857 105 57 2 7 110 178 280 9.64e-22 94.0
MS.gene017438.t1 MTR_7g061330 43.689 103 57 1 9 111 77 178 1.28e-21 94.0
MS.gene017438.t1 MTR_5g041570 41.176 102 59 1 9 110 134 234 1.84e-21 93.2
MS.gene017438.t1 MTR_3g077650 41.667 108 60 2 9 115 181 286 2.66e-21 92.8
MS.gene017438.t1 MTR_3g463400 34.266 143 87 2 9 151 133 268 2.66e-21 92.8
MS.gene017438.t1 MTR_3g110028 39.806 103 61 1 9 111 85 186 3.01e-21 93.2
MS.gene017438.t1 MTR_3g110028 30.435 138 88 3 4 140 28 158 6.30e-12 65.9
MS.gene017438.t1 MTR_1g057980 41.121 107 62 1 2 108 73 178 6.54e-21 89.7
MS.gene017438.t1 MTR_7g451170 31.288 163 107 3 9 168 191 351 9.47e-21 90.9
MS.gene017438.t1 MTR_7g086960 43.137 102 57 1 9 110 89 189 1.24e-20 90.1
MS.gene017438.t1 MTR_5g070020 41.176 102 59 1 9 110 122 222 2.03e-20 89.4
MS.gene017438.t1 MTR_6g074860 40.404 99 58 1 9 107 4 101 3.60e-20 86.7
MS.gene017438.t1 MTR_6g027340 42.268 97 55 1 9 105 16 111 4.76e-20 85.5
MS.gene017438.t1 MTR_6g015455 41.509 106 53 2 9 110 5 105 7.90e-20 89.4
MS.gene017438.t1 MTR_6g027360 41.414 99 57 1 7 105 76 173 1.32e-19 86.7
MS.gene017438.t1 MTR_4g088015 38.835 103 62 1 7 109 219 320 1.78e-19 87.4
MS.gene017438.t1 MTR_7g061550 30.097 206 106 6 12 200 10 194 2.38e-19 86.3
MS.gene017438.t1 MTR_7g035350 42.000 100 57 1 9 108 225 323 5.44e-19 86.3
MS.gene017438.t1 MTR_1g085880 42.857 105 58 2 7 109 11 115 4.20e-18 80.1
MS.gene017438.t1 MTR_6g027370 40.196 102 60 1 9 110 99 199 6.71e-18 82.4
MS.gene017438.t1 MTR_1g085770 42.857 105 58 2 7 109 11 115 1.01e-17 81.3
MS.gene017438.t1 MTR_7g037130 37.500 112 67 2 7 118 143 251 1.32e-17 81.6
MS.gene017438.t1 MTR_5g082910 37.864 103 55 2 9 107 19 116 2.00e-17 80.1
MS.gene017438.t1 MTR_7g450950 32.308 130 86 2 1 130 149 276 2.76e-17 80.5
MS.gene017438.t1 MTR_5g010650 38.542 96 58 1 9 104 110 204 9.87e-16 76.6
MS.gene017438.t1 MTR_2g088730 66.667 39 13 0 65 103 34 72 4.36e-14 66.2
MS.gene017438.t1 MTR_8g468380 30.657 137 94 1 11 147 24 159 2.32e-13 69.7
MS.gene017438.t1 MTR_5g038910 34.653 101 65 1 11 111 28 127 2.52e-13 69.7
MS.gene017438.t1 MTR_5g038910 34.653 101 65 1 11 111 28 127 2.94e-13 69.3
MS.gene017438.t1 MTR_6g055910 53.846 52 24 0 65 116 2 53 3.89e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017438.t1 AT1G66370 50.000 220 88 6 2 209 3 212 1.75e-60 191
MS.gene017438.t1 AT1G56650 61.644 146 55 1 4 148 5 150 8.43e-53 172
MS.gene017438.t1 AT1G66380 77.273 110 25 0 4 113 5 114 8.84e-52 166
MS.gene017438.t1 AT1G66390 62.585 147 53 1 4 148 5 151 2.34e-51 168
MS.gene017438.t1 AT3G13540 63.551 107 39 0 6 112 22 128 1.04e-45 154
MS.gene017438.t1 AT2G16720 60.377 106 42 0 9 114 14 119 6.29e-42 144
MS.gene017438.t1 AT5G35550 58.261 115 47 1 7 121 14 127 7.02e-42 144
MS.gene017438.t1 AT5G14750 49.020 153 67 3 8 160 17 158 5.00e-41 140
MS.gene017438.t1 AT4G38620 61.538 104 40 0 9 112 14 117 5.97e-41 142
MS.gene017438.t1 AT4G09460 49.630 135 61 1 9 136 14 148 8.85e-41 140
MS.gene017438.t1 AT5G16770 59.813 107 43 0 6 112 11 117 1.14e-40 143
MS.gene017438.t1 AT5G16770 59.813 107 43 0 6 112 11 117 1.14e-40 143
MS.gene017438.t1 AT4G05100 57.658 111 47 0 2 112 8 118 1.28e-40 142
MS.gene017438.t1 AT1G22640 58.491 106 44 0 9 114 14 119 1.54e-40 140
MS.gene017438.t1 AT5G16770 59.813 107 43 0 6 112 11 117 1.73e-40 142
MS.gene017438.t1 AT5G16770 59.813 107 43 0 6 112 11 117 1.73e-40 142
MS.gene017438.t1 AT4G17785 58.559 111 46 0 2 112 8 118 2.83e-40 142
MS.gene017438.t1 AT4G17785 58.559 111 46 0 2 112 8 118 3.48e-40 142
MS.gene017438.t1 AT3G02940 59.813 107 43 0 6 112 11 117 5.41e-40 140
MS.gene017438.t1 AT4G21440 58.879 107 44 0 6 112 11 117 6.17e-40 141
MS.gene017438.t1 AT3G23250 47.917 144 74 1 6 149 11 153 6.23e-40 140
MS.gene017438.t1 AT3G02940 59.813 107 43 0 6 112 11 117 7.42e-40 140
MS.gene017438.t1 AT3G02940 59.813 107 43 0 6 112 11 117 7.42e-40 140
MS.gene017438.t1 AT5G40330 58.654 104 43 0 8 111 13 116 7.55e-40 137
MS.gene017438.t1 AT4G34990 58.491 106 44 0 9 114 14 119 1.02e-39 139
MS.gene017438.t1 AT3G27920 57.143 105 45 0 8 112 15 119 1.13e-39 137
MS.gene017438.t1 AT4G28110 57.009 107 46 0 6 112 11 117 1.37e-39 139
MS.gene017438.t1 AT5G52600 53.659 123 51 1 7 129 12 128 3.72e-39 135
MS.gene017438.t1 AT5G60890 56.881 109 47 0 3 111 8 116 4.26e-39 138
MS.gene017438.t1 AT3G30210 33.333 264 146 6 6 258 26 270 4.84e-39 137
MS.gene017438.t1 AT5G65230 57.944 107 45 0 6 112 11 117 5.42e-39 138
MS.gene017438.t1 AT4G01680 60.000 105 42 0 7 111 12 116 9.17e-39 135
MS.gene017438.t1 AT3G61250 57.009 107 46 0 6 112 11 117 1.02e-38 137
MS.gene017438.t1 AT1G06180 52.991 117 55 0 6 122 11 127 1.07e-38 135
MS.gene017438.t1 AT1G57560 39.604 202 102 4 7 192 12 209 1.19e-38 137
MS.gene017438.t1 AT5G10280 57.944 107 45 0 6 112 11 117 1.48e-38 137
MS.gene017438.t1 AT5G54230 58.491 106 44 0 7 112 12 117 2.39e-38 136
MS.gene017438.t1 AT4G01680 60.000 105 42 0 7 111 12 116 2.82e-38 137
MS.gene017438.t1 AT1G18570 56.881 109 47 0 6 114 12 120 2.96e-38 137
MS.gene017438.t1 AT5G56110 60.000 105 42 0 7 111 12 116 3.39e-38 136
MS.gene017438.t1 AT5G07700 57.009 107 46 0 6 112 11 117 4.08e-38 136
MS.gene017438.t1 AT5G07700 57.009 107 46 0 6 112 11 117 4.08e-38 136
MS.gene017438.t1 AT5G07690 55.963 109 48 0 6 114 11 119 4.39e-38 136
MS.gene017438.t1 AT2G31180 57.547 106 45 0 6 111 11 116 6.44e-38 134
MS.gene017438.t1 AT1G57560 57.407 108 46 0 7 114 12 119 1.01e-37 134
MS.gene017438.t1 AT3G48920 49.194 124 63 0 1 124 12 135 1.20e-37 133
MS.gene017438.t1 AT3G47600 58.491 106 44 0 6 111 11 116 1.33e-37 135
MS.gene017438.t1 AT1G74650 55.357 112 50 0 7 118 12 123 1.61e-37 134
MS.gene017438.t1 AT1G74080 52.679 112 53 0 3 114 8 119 1.70e-37 134
MS.gene017438.t1 AT5G15310 56.075 107 47 0 6 112 11 117 2.07e-37 134
MS.gene017438.t1 AT5G15310 56.075 107 47 0 6 112 11 117 2.41e-37 132
MS.gene017438.t1 AT5G15310 56.075 107 47 0 6 112 11 117 2.60e-37 134
MS.gene017438.t1 AT1G08810 49.219 128 63 1 6 133 11 136 3.72e-37 132
MS.gene017438.t1 AT3G01140 57.009 107 46 0 6 112 11 117 3.80e-37 134
MS.gene017438.t1 AT5G61420 55.140 107 48 0 6 112 11 117 4.23e-37 134
MS.gene017438.t1 AT5G49330 55.660 106 47 0 6 111 11 116 4.55e-37 134
MS.gene017438.t1 AT5G62470 54.783 115 52 0 6 120 11 125 4.65e-37 134
MS.gene017438.t1 AT1G34670 57.944 107 45 0 6 112 11 117 5.01e-37 134
MS.gene017438.t1 AT1G35515 54.717 106 48 0 7 112 12 117 5.12e-37 130
MS.gene017438.t1 AT1G16490 48.819 127 64 1 2 128 10 135 6.71e-37 132
MS.gene017438.t1 AT1G74430 55.046 109 49 0 6 114 11 119 8.14e-37 131
MS.gene017438.t1 AT3G13890 55.660 106 47 0 7 112 12 117 8.30e-37 133
MS.gene017438.t1 AT3G01140 57.009 107 46 0 6 112 54 160 1.05e-36 134
MS.gene017438.t1 AT5G26660 58.095 105 44 0 7 111 12 116 1.10e-36 133
MS.gene017438.t1 AT5G57620 43.671 158 88 1 7 163 12 169 1.28e-36 132
MS.gene017438.t1 AT3G28910 57.547 106 45 0 6 111 11 116 1.29e-36 132
MS.gene017438.t1 AT1G09540 40.698 172 90 1 7 166 12 183 4.85e-36 131
MS.gene017438.t1 AT5G62320 41.143 175 95 3 6 172 12 186 5.95e-36 128
MS.gene017438.t1 AT4G25560 34.800 250 147 5 8 253 11 248 1.18e-35 129
MS.gene017438.t1 AT5G12870 52.294 109 52 0 3 111 14 122 1.33e-35 128
MS.gene017438.t1 AT5G65790 48.819 127 64 1 7 132 12 138 1.41e-35 130
MS.gene017438.t1 AT1G66380 72.093 86 24 0 4 89 5 90 1.71e-35 123
MS.gene017438.t1 AT5G62470 54.783 115 51 1 6 120 11 124 1.74e-35 130
MS.gene017438.t1 AT2G47460 52.830 106 50 0 6 111 11 116 4.66e-35 129
MS.gene017438.t1 AT3G62610 54.717 106 48 0 6 111 11 116 5.70e-35 128
MS.gene017438.t1 AT4G01680 53.846 117 42 1 7 111 12 128 8.41e-35 128
MS.gene017438.t1 AT3G28470 56.566 99 43 0 7 105 12 110 8.89e-35 127
MS.gene017438.t1 AT4G22680 55.140 107 48 0 6 112 11 117 1.16e-34 125
MS.gene017438.t1 AT4G37780 51.351 111 53 1 6 115 11 121 2.58e-34 125
MS.gene017438.t1 AT3G49690 54.545 110 49 1 7 115 12 121 4.01e-34 125
MS.gene017438.t1 AT5G23000 55.357 112 48 2 2 112 8 118 4.13e-34 125
MS.gene017438.t1 AT1G18710 51.376 109 53 0 6 114 11 119 5.57e-34 124
MS.gene017438.t1 AT3G46130 51.304 115 56 0 1 115 3 117 5.81e-34 123
MS.gene017438.t1 AT1G79180 51.429 105 51 0 7 111 14 118 7.76e-34 124
MS.gene017438.t1 AT3G13890 51.304 115 47 1 7 112 12 126 9.29e-34 125
MS.gene017438.t1 AT1G56160 52.336 107 51 0 7 113 14 120 1.12e-33 124
MS.gene017438.t1 AT4G13480 55.085 118 52 1 8 125 7 123 1.50e-33 122
MS.gene017438.t1 AT5G59780 53.704 108 50 0 8 115 9 116 1.94e-33 121
MS.gene017438.t1 AT4G12350 55.660 106 47 0 7 112 12 117 2.01e-33 123
MS.gene017438.t1 AT3G24310 51.200 125 58 1 6 130 17 138 3.72e-33 122
MS.gene017438.t1 AT2G32460 50.000 106 53 0 5 110 4 109 4.54e-33 125
MS.gene017438.t1 AT2G32460 50.000 106 53 0 5 110 16 121 4.75e-33 125
MS.gene017438.t1 AT1G63910 52.381 105 50 0 7 111 12 116 6.90e-33 123
MS.gene017438.t1 AT1G25340 55.769 104 46 0 8 111 19 122 8.62e-33 121
MS.gene017438.t1 AT3G12720 49.057 106 54 0 7 112 22 127 1.07e-32 121
MS.gene017438.t1 AT3G08500 52.381 105 50 0 7 111 30 134 1.79e-32 122
MS.gene017438.t1 AT3G12820 50.000 106 53 0 7 112 14 119 2.36e-32 119
MS.gene017438.t1 AT5G40350 37.430 179 107 3 7 180 17 195 2.44e-32 118
MS.gene017438.t1 AT5G52260 56.311 103 45 0 8 110 13 115 4.69e-32 119
MS.gene017438.t1 AT2G47190 49.091 110 56 0 2 111 15 124 4.97e-32 119
MS.gene017438.t1 AT5G55020 51.456 103 50 0 7 109 26 128 6.59e-32 123
MS.gene017438.t1 AT3G01530 51.429 105 51 0 7 111 25 129 6.61e-32 117
MS.gene017438.t1 AT5G06100 48.571 105 54 0 6 110 31 135 7.79e-32 122
MS.gene017438.t1 AT1G66230 53.774 106 49 0 6 111 11 116 1.13e-31 118
MS.gene017438.t1 AT4G26930 49.515 103 52 0 7 109 19 121 1.19e-31 120
MS.gene017438.t1 AT2G26960 49.524 105 53 0 5 109 18 122 1.30e-31 121
MS.gene017438.t1 AT5G06100 48.571 105 54 0 6 110 31 135 1.78e-31 122
MS.gene017438.t1 AT5G06100 48.571 105 54 0 6 110 31 135 1.78e-31 122
MS.gene017438.t1 AT5G06100 48.571 105 54 0 6 110 31 135 1.78e-31 122
MS.gene017438.t1 AT5G06100 48.571 105 54 0 6 110 31 135 1.78e-31 122
MS.gene017438.t1 AT5G14340 52.830 106 50 0 6 111 23 128 1.94e-31 117
MS.gene017438.t1 AT1G48000 54.369 103 47 0 7 109 32 134 2.11e-31 116
MS.gene017438.t1 AT2G36890 53.271 107 49 1 7 112 12 118 4.13e-31 117
MS.gene017438.t1 AT2G36890 53.271 107 49 1 7 112 53 159 4.61e-31 118
MS.gene017438.t1 AT3G53200 50.909 110 54 0 1 110 3 112 5.13e-31 115
MS.gene017438.t1 AT1G68320 54.286 105 48 0 7 111 19 123 5.81e-31 116
MS.gene017438.t1 AT3G27810 50.476 105 52 0 7 111 20 124 2.05e-30 113
MS.gene017438.t1 AT5G16600 51.887 106 51 0 6 111 11 116 2.86e-30 115
MS.gene017438.t1 AT1G66380 78.667 75 16 0 39 113 7 81 6.05e-30 108
MS.gene017438.t1 AT3G11440 44.643 112 58 1 3 110 33 144 6.64e-30 117
MS.gene017438.t1 AT5G14750 59.770 87 32 1 34 120 12 95 6.72e-30 110
MS.gene017438.t1 AT3G11440 46.154 104 56 0 7 110 41 144 1.42e-29 116
MS.gene017438.t1 AT3G11440 46.154 104 56 0 7 110 41 144 1.42e-29 116
MS.gene017438.t1 AT3G11440 46.154 104 56 0 7 110 41 144 1.42e-29 116
MS.gene017438.t1 AT1G25340 53.846 104 43 1 8 111 19 117 1.43e-29 112
MS.gene017438.t1 AT1G25340 53.846 104 43 1 8 111 19 117 2.45e-29 112
MS.gene017438.t1 AT5G35550 63.415 82 29 1 40 121 50 130 3.54e-29 111
MS.gene017438.t1 AT1G79180 38.462 143 54 2 2 111 10 151 1.66e-27 108
MS.gene017438.t1 AT5G26660 58.442 77 32 0 35 111 9 85 3.45e-26 104
MS.gene017438.t1 AT2G26950 38.406 138 81 2 1 138 12 145 1.32e-25 103
MS.gene017438.t1 AT3G06490 49.541 109 55 0 1 109 13 121 1.44e-25 103
MS.gene017438.t1 AT3G53200 59.740 77 31 0 34 110 3 79 3.77e-25 99.4
MS.gene017438.t1 AT5G49620 49.541 109 55 0 1 109 20 128 3.83e-25 101
MS.gene017438.t1 AT3G47600 63.889 72 26 0 40 111 39 110 5.47e-25 101
MS.gene017438.t1 AT1G69560 35.971 139 82 3 6 144 104 235 1.21e-24 100
MS.gene017438.t1 AT1G69560 35.971 139 82 3 6 144 120 251 1.33e-24 100
MS.gene017438.t1 AT5G59780 58.974 78 32 0 38 115 18 95 1.44e-24 97.8
MS.gene017438.t1 AT3G46130 58.974 78 32 0 38 115 18 95 3.18e-24 97.4
MS.gene017438.t1 AT3G46130 58.442 77 32 0 39 115 9 85 6.37e-24 96.7
MS.gene017438.t1 AT2G39880 47.059 102 53 1 9 110 50 150 7.69e-24 99.0
MS.gene017438.t1 AT5G11510 43.689 103 57 1 9 111 81 182 9.51e-24 100
MS.gene017438.t1 AT5G11510 28.358 134 88 3 4 136 24 150 2.52e-11 63.9
MS.gene017438.t1 AT5G11510 43.689 103 57 1 9 111 81 182 9.51e-24 100
MS.gene017438.t1 AT5G11510 28.358 134 88 3 4 136 24 150 2.52e-11 63.9
MS.gene017438.t1 AT5G11510 43.689 103 57 1 9 111 81 182 9.51e-24 100
MS.gene017438.t1 AT5G11510 28.358 134 88 3 4 136 24 150 2.52e-11 63.9
MS.gene017438.t1 AT3G55730 45.283 106 57 1 5 110 52 156 1.11e-23 99.0
MS.gene017438.t1 AT5G11510 43.689 103 57 1 9 111 81 182 1.44e-23 100
MS.gene017438.t1 AT5G11510 28.261 138 91 3 4 140 24 154 2.00e-11 64.3
MS.gene017438.t1 AT5G11510 43.689 103 57 1 9 111 81 182 1.62e-23 99.8
MS.gene017438.t1 AT5G11510 28.261 138 91 3 4 140 24 154 1.81e-11 64.3
MS.gene017438.t1 AT4G18770 42.735 117 58 2 3 115 211 322 4.51e-23 97.4
MS.gene017438.t1 AT4G37260 43.137 102 57 1 9 110 13 113 7.10e-23 95.5
MS.gene017438.t1 AT3G12820 54.286 70 32 0 43 112 2 71 8.99e-23 92.4
MS.gene017438.t1 AT3G09230 42.308 104 59 1 9 112 55 157 1.30e-22 95.9
MS.gene017438.t1 AT5G02320 41.748 103 59 1 9 111 127 228 1.62e-22 96.7
MS.gene017438.t1 AT5G02320 41.748 103 59 1 9 111 127 228 1.62e-22 96.7
MS.gene017438.t1 AT1G71030 60.294 68 27 0 45 112 4 71 2.30e-22 91.3
MS.gene017438.t1 AT5G02320 41.748 103 59 1 9 111 67 168 2.32e-22 95.9
MS.gene017438.t1 AT2G23290 43.137 102 57 1 9 110 13 113 2.74e-22 94.0
MS.gene017438.t1 AT1G71030 60.294 68 27 0 45 112 18 85 2.90e-22 91.3
MS.gene017438.t1 AT2G37630 42.241 116 59 2 12 125 7 116 4.35e-22 94.4
MS.gene017438.t1 AT1G26780 42.157 102 58 1 9 110 98 198 4.61e-22 92.8
MS.gene017438.t1 AT3G60460 42.593 108 61 1 3 109 7 114 4.65e-22 93.2
MS.gene017438.t1 AT1G26780 42.157 102 58 1 9 110 98 198 6.46e-22 93.6
MS.gene017438.t1 AT5G67300 44.118 102 56 1 9 110 6 106 1.01e-21 92.4
MS.gene017438.t1 AT5G49620 43.902 123 55 1 1 109 20 142 1.15e-21 92.4
MS.gene017438.t1 AT5G14750 48.148 108 45 3 53 160 1 97 1.56e-21 87.8
MS.gene017438.t1 AT5G14750 48.148 108 45 3 53 160 1 97 1.56e-21 87.8
MS.gene017438.t1 AT3G50060 36.719 128 72 2 9 128 6 132 3.83e-21 90.5
MS.gene017438.t1 AT5G40350 34.247 146 91 3 40 180 5 150 5.02e-21 87.4
MS.gene017438.t1 AT3G09370 41.176 102 59 1 9 110 135 235 6.04e-21 92.0
MS.gene017438.t1 AT3G09370 31.731 104 69 2 9 111 83 185 4.87e-11 62.8
MS.gene017438.t1 AT3G09370 41.176 102 59 1 9 110 130 230 6.31e-21 92.0
MS.gene017438.t1 AT3G09370 31.731 104 69 2 9 111 78 180 5.22e-11 62.8
MS.gene017438.t1 AT1G17950 40.196 102 60 1 9 110 5 105 6.72e-21 89.0
MS.gene017438.t1 AT4G33450 32.886 149 83 3 1 139 1 142 8.94e-21 88.6
MS.gene017438.t1 AT3G09370 41.176 102 59 1 9 110 143 243 9.38e-21 91.7
MS.gene017438.t1 AT3G09370 31.731 104 69 2 9 111 91 193 5.59e-11 62.8
MS.gene017438.t1 AT3G27785 40.741 108 63 1 3 110 183 289 1.33e-20 90.5
MS.gene017438.t1 AT1G73410 42.056 107 53 2 9 111 6 107 1.43e-20 87.8
MS.gene017438.t1 AT1G73410 42.056 107 53 2 9 111 6 107 2.88e-20 86.3
MS.gene017438.t1 AT5G17800 35.897 117 74 1 4 120 88 203 4.83e-20 87.8
MS.gene017438.t1 AT4G32730 37.864 103 63 1 9 111 87 188 7.93e-20 89.0
MS.gene017438.t1 AT4G32730 37.864 103 63 1 9 111 87 188 9.21e-20 89.0
MS.gene017438.t1 AT4G32730 37.864 103 63 1 9 111 87 188 9.21e-20 89.0
MS.gene017438.t1 AT4G32730 37.864 103 63 1 9 111 87 188 9.21e-20 89.0
MS.gene017438.t1 AT4G32730 37.864 103 63 1 9 111 87 188 9.21e-20 89.0
MS.gene017438.t1 AT3G27810 51.389 72 35 0 40 111 4 75 1.35e-19 84.0
MS.gene017438.t1 AT1G18960 41.509 106 53 3 9 111 10 109 1.42e-19 86.3
MS.gene017438.t1 AT3G23250 45.361 97 52 1 53 149 1 96 1.43e-19 85.1
MS.gene017438.t1 AT3G29020 38.532 109 64 2 4 111 60 166 2.27e-19 84.7
MS.gene017438.t1 AT3G29020 38.532 109 64 2 4 111 62 168 2.80e-19 85.5
MS.gene017438.t1 AT5G58850 37.838 111 68 1 9 119 105 214 4.41e-19 86.3
MS.gene017438.t1 AT1G22640 53.226 62 29 0 53 114 1 62 6.14e-19 82.8
MS.gene017438.t1 AT5G40360 40.777 103 60 1 7 109 156 257 8.91e-19 84.7
MS.gene017438.t1 AT5G11050 32.168 143 93 2 5 147 101 239 1.29e-18 85.1
MS.gene017438.t1 AT5G39700 37.288 118 72 2 2 119 49 164 2.50e-17 78.2
MS.gene017438.t1 AT2G25230 38.318 107 65 1 3 109 20 125 7.48e-17 77.8
MS.gene017438.t1 AT4G00540 36.697 109 65 2 6 111 100 207 6.00e-16 77.0
MS.gene017438.t1 AT4G00540 37.037 108 64 2 7 111 99 205 7.74e-16 77.0
MS.gene017438.t1 AT5G40430 37.383 107 65 2 3 109 48 152 1.42e-15 74.7
MS.gene017438.t1 AT2G02820 34.653 101 65 1 11 111 32 131 2.02e-13 69.3
MS.gene017438.t1 AT2G02820 34.653 101 65 1 11 111 32 131 2.33e-13 69.7
MS.gene017438.t1 AT2G02820 34.653 101 65 1 11 111 32 131 2.35e-13 69.7
MS.gene017438.t1 AT1G14350 33.663 101 66 1 11 111 27 126 1.16e-12 67.4
MS.gene017438.t1 AT1G14350 33.663 101 66 1 11 111 27 126 1.16e-12 67.4
MS.gene017438.t1 AT4G25560 29.167 192 120 5 66 253 3 182 4.86e-12 63.9
MS.gene017438.t1 AT1G74650 57.447 47 20 0 72 118 1 47 1.16e-11 63.5
MS.gene017438.t1 AT5G59780 59.091 44 18 0 72 115 8 51 9.42e-11 59.7

Find 53 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGTGCATCACCAATATT+TGG 0.157018 5.1:+61485081 None:intergenic
GATTGGGATTTCAATTCCTT+TGG 0.296288 5.1:-61484883 MS.gene017438:CDS
ACAAGTATGGTGAAGGAAAA+TGG 0.332221 5.1:-61486116 MS.gene017438:CDS
ATGAAATTGATATGATTCTA+AGG 0.332329 5.1:-61485840 MS.gene017438:CDS
TCTAAGGCTACACAAACTTC+TGG 0.348121 5.1:-61485824 MS.gene017438:CDS
TTGATTGCTGCAAGGCTTCC+GGG 0.348445 5.1:-61485372 MS.gene017438:CDS
CCAATGATGTGAAGAATTAC+TGG 0.351522 5.1:-61485341 MS.gene017438:CDS
GAAAGAAGTAATGAGAAAAT+TGG 0.354552 5.1:-61484997 MS.gene017438:CDS
ATTGGGATTTCAATTCCTTT+GGG 0.360516 5.1:-61484882 MS.gene017438:CDS
ATTGATTGCTGCAAGGCTTC+CGG 0.362167 5.1:-61485373 MS.gene017438:CDS
CTTTATCAACTCATTCACTA+TGG 0.363243 5.1:-61485200 MS.gene017438:CDS
CCAGTAATTCTTCACATCAT+TGG 0.377602 5.1:+61485341 None:intergenic
AAGACTATACTCCCAAATAT+TGG 0.386984 5.1:-61485093 MS.gene017438:CDS
AAGGCTTGTATTAACAAGTA+TGG 0.389039 5.1:-61486129 MS.gene017438:CDS
TACACAAACTTCTGGGGAAC+AGG 0.401830 5.1:-61485816 MS.gene017438:intron
CTAAGGCTACACAAACTTCT+GGG 0.440029 5.1:-61485823 MS.gene017438:CDS
ATAGTCTTGTCACACTCTCT+TGG 0.461855 5.1:+61485108 None:intergenic
TACGCTCAGTGATTCCGATT+GGG 0.463622 5.1:-61484899 MS.gene017438:CDS
GTTGTGCATCACCAATATTT+GGG 0.464776 5.1:+61485082 None:intergenic
GTTGATAAAGTTCGAGGTCG+AGG 0.499120 5.1:+61485213 None:intergenic
GCAAAACTAGTGGGTGAAGA+TGG 0.501577 5.1:-61485138 MS.gene017438:CDS
CTCTTGCTCTTTATTACAAG+AGG 0.514599 5.1:-61484974 MS.gene017438:CDS
CTACGCTCAGTGATTCCGAT+TGG 0.522116 5.1:-61484900 MS.gene017438:CDS
CATTTAGTTCCTAAAAGAGC+AGG 0.524795 5.1:-61486093 MS.gene017438:intron
AAGACCAGAGGCGTGAGAAA+AGG 0.526806 5.1:-61486183 MS.gene017438:CDS
AAAAGGTGCATGGACATATG+AGG 0.529512 5.1:-61486166 MS.gene017438:CDS
TCCCACCACATAGTAGAAAG+TGG 0.533859 5.1:+61485042 None:intergenic
ACATCATTGGCTGTTCTACC+CGG 0.538561 5.1:+61485354 None:intergenic
ATCTCCCACTTTCTACTATG+TGG 0.539694 5.1:-61485047 MS.gene017438:CDS
GAATGAGTTGATAAAGTTCG+AGG 0.542787 5.1:+61485207 None:intergenic
GCCGGAAAAGTTGTAGATTG+AGG 0.555853 5.1:-61485912 MS.gene017438:CDS
AAAGGAATTGAAATCCCAAT+CGG 0.557492 5.1:+61484885 None:intergenic
TCCCACTTTCTACTATGTGG+TGG 0.561350 5.1:-61485044 MS.gene017438:CDS
TGTATTAACAAGTATGGTGA+AGG 0.564505 5.1:-61486123 MS.gene017438:CDS
TTGGGATTTCAATTCCTTTG+GGG 0.564675 5.1:-61484881 MS.gene017438:CDS
CCCACTTTCTACTATGTGGT+GGG 0.579986 5.1:-61485043 MS.gene017438:CDS
ATGCAGGTTTGAATAGATGC+CGG 0.589011 5.1:-61485930 MS.gene017438:intron
TGCTAGTGCAGCAAAACTAG+TGG 0.611174 5.1:-61485148 MS.gene017438:CDS
TGAGGAGGACAATCTACTCA+AGG 0.611389 5.1:-61486148 MS.gene017438:CDS
GTGGGAGAGTTTGTTAAACG+TGG 0.613607 5.1:-61485025 MS.gene017438:CDS
GAGGCGTGAGAAAAGGTGCA+TGG 0.616816 5.1:-61486176 MS.gene017438:CDS
GAAAAGTTGTAGATTGAGGT+GGG 0.628302 5.1:-61485908 MS.gene017438:CDS
CCCACCACATAGTAGAAAGT+GGG 0.628761 5.1:+61485043 None:intergenic
GCTAGTGCAGCAAAACTAGT+GGG 0.641701 5.1:-61485147 MS.gene017438:CDS
GATGGTCATTGATTGCTGCA+AGG 0.644969 5.1:-61485380 MS.gene017438:CDS
CAATCGGAATCACTGAGCGT+AGG 0.649608 5.1:+61484901 None:intergenic
GGAAAAGTTGTAGATTGAGG+TGG 0.655059 5.1:-61485909 MS.gene017438:CDS
CAACTAATTAAAGACCCCAA+AGG 0.667420 5.1:+61484867 None:intergenic
AGGTGCATGGACATATGAGG+AGG 0.682411 5.1:-61486163 MS.gene017438:CDS
TAAGGCTACACAAACTTCTG+GGG 0.683156 5.1:-61485822 MS.gene017438:CDS
GGTGATGCACAACCATGTGT+TGG 0.693947 5.1:-61485072 MS.gene017438:CDS
GTGCATATGGAAAAGACCAG+AGG 0.707799 5.1:-61486195 None:intergenic
AGTGGGAGATTACCAACACA+TGG 0.709814 5.1:+61485060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAATAAATGTATAGA+TGG - chr5.1:61485661-61485680 MS.gene017438:intron 10.0%
!! AGATGAAATATACTATAATT+TGG + chr5.1:61485628-61485647 None:intergenic 15.0%
!! CACAAATATATATTAAACTA+AGG + chr5.1:61485602-61485621 None:intergenic 15.0%
!!! TTATATTTAGAATATAAGCA+TGG + chr5.1:61485076-61485095 None:intergenic 15.0%
!! AATTATTAAACTGTATATGC+AGG - chr5.1:61485113-61485132 MS.gene017438:CDS 20.0%
!! ATGAAATTGATATGATTCTA+AGG - chr5.1:61485219-61485238 MS.gene017438:CDS 20.0%
!!! AATTGCTATTTGTACATATT+AGG - chr5.1:61485292-61485311 MS.gene017438:CDS 20.0%
!!! ATTGCTATTTGTACATATTA+GGG - chr5.1:61485293-61485312 MS.gene017438:CDS 20.0%
!!! TCTTCATTTTCTTCTTTTTT+TGG + chr5.1:61485771-61485790 None:intergenic 20.0%
! CTACTAGATCTAAATTAACA+AGG + chr5.1:61485324-61485343 None:intergenic 25.0%
! GAAAGAAGTAATGAGAAAAT+TGG - chr5.1:61486062-61486081 MS.gene017438:intron 25.0%
! TCTAACTATAGATATGTAGA+TGG + chr5.1:61485037-61485056 None:intergenic 25.0%
!!! GTGGAGGAATTTTTTAATAA+TGG - chr5.1:61486134-61486153 MS.gene017438:CDS 25.0%
!!! TTGCTATTTGTACATATTAG+GGG - chr5.1:61485294-61485313 MS.gene017438:CDS 25.0%
AAAGGAATTGAAATCCCAAT+CGG + chr5.1:61486177-61486196 None:intergenic 30.0%
AAGACTATACTCCCAAATAT+TGG - chr5.1:61485966-61485985 MS.gene017438:intron 30.0%
AAGGCTTGTATTAACAAGTA+TGG - chr5.1:61484930-61484949 MS.gene017438:CDS 30.0%
ATTGGGATTTCAATTCCTTT+GGG - chr5.1:61486177-61486196 MS.gene017438:CDS 30.0%
CTTTATCAACTCATTCACTA+TGG - chr5.1:61485859-61485878 MS.gene017438:CDS 30.0%
TGTATTAACAAGTATGGTGA+AGG - chr5.1:61484936-61484955 MS.gene017438:CDS 30.0%
!! AAAGTTTCTCTTTTGATTGC+GGG + chr5.1:61485191-61485210 None:intergenic 30.0%
!! ATTTTTCTATACGCACTGAT+TGG + chr5.1:61485504-61485523 None:intergenic 30.0%
!! GAAAGTTTCTCTTTTGATTG+CGG + chr5.1:61485192-61485211 None:intergenic 30.0%
!!! TTTTTCTATACGCACTGATT+GGG + chr5.1:61485503-61485522 None:intergenic 30.0%
ACAAGTATGGTGAAGGAAAA+TGG - chr5.1:61484943-61484962 MS.gene017438:CDS 35.0%
CCAATGATGTGAAGAATTAC+TGG - chr5.1:61485718-61485737 MS.gene017438:intron 35.0%
CCAGTAATTCTTCACATCAT+TGG + chr5.1:61485721-61485740 None:intergenic 35.0%
CTCTTGCTCTTTATTACAAG+AGG - chr5.1:61486085-61486104 MS.gene017438:intron 35.0%
GAAAAGTTGTAGATTGAGGT+GGG - chr5.1:61485151-61485170 MS.gene017438:CDS 35.0%
GATTGGGATTTCAATTCCTT+TGG - chr5.1:61486176-61486195 MS.gene017438:CDS 35.0%
GTTGTGCATCACCAATATTT+GGG + chr5.1:61485980-61485999 None:intergenic 35.0%
TATGCTTCCAAATACCAACA+CGG - chr5.1:61485422-61485441 MS.gene017438:intron 35.0%
TTGGGATTTCAATTCCTTTG+GGG - chr5.1:61486178-61486197 MS.gene017438:CDS 35.0%
! ACCTCAATCTACAACTTTTC+CGG + chr5.1:61485151-61485170 None:intergenic 35.0%
! ATACAAGTACCTGCTCTTTT+AGG + chr5.1:61484978-61484997 None:intergenic 35.0%
! CACTTCAGAGTTTTCAAATG+TGG - chr5.1:61486115-61486134 MS.gene017438:CDS 35.0%
! CATTTAGTTCCTAAAAGAGC+AGG - chr5.1:61484966-61484985 MS.gene017438:CDS 35.0%
! TTCAGAGTTTTCAAATGTGG+AGG - chr5.1:61486118-61486137 MS.gene017438:CDS 35.0%
!! AAGTTTCTCTTTTGATTGCG+GGG + chr5.1:61485190-61485209 None:intergenic 35.0%
!! GAATGAGTTGATAAAGTTCG+AGG + chr5.1:61485855-61485874 None:intergenic 35.0%
!!! TTTTCTATACGCACTGATTG+GGG + chr5.1:61485502-61485521 None:intergenic 35.0%
ATCTCCCACTTTCTACTATG+TGG - chr5.1:61486012-61486031 MS.gene017438:intron 40.0%
ATGCAGGTTTGAATAGATGC+CGG - chr5.1:61485129-61485148 MS.gene017438:CDS 40.0%
CTAAGGCTACACAAACTTCT+GGG - chr5.1:61485236-61485255 MS.gene017438:CDS 40.0%
GAGCGATCTACAATTACATG+TGG - chr5.1:61485547-61485566 MS.gene017438:intron 40.0%
GGAAAAGTTGTAGATTGAGG+TGG - chr5.1:61485150-61485169 MS.gene017438:CDS 40.0%
GGTTGTGCATCACCAATATT+TGG + chr5.1:61485981-61486000 None:intergenic 40.0%
TAAGGCTACACAAACTTCTG+GGG - chr5.1:61485237-61485256 MS.gene017438:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG - chr5.1:61484893-61484912 MS.gene017438:CDS 40.0%
! TCTAAGGCTACACAAACTTC+TGG - chr5.1:61485235-61485254 MS.gene017438:CDS 40.0%
!! ATAGTCTTGTCACACTCTCT+TGG + chr5.1:61485954-61485973 None:intergenic 40.0%
AGTGGGAGATTACCAACACA+TGG + chr5.1:61486002-61486021 None:intergenic 45.0%
ATTGATTGCTGCAAGGCTTC+CGG - chr5.1:61485686-61485705 MS.gene017438:intron 45.0%
CCCACCACATAGTAGAAAGT+GGG + chr5.1:61486019-61486038 None:intergenic 45.0%
CCCACTTTCTACTATGTGGT+GGG - chr5.1:61486016-61486035 MS.gene017438:intron 45.0%
GCCGGAAAAGTTGTAGATTG+AGG - chr5.1:61485147-61485166 MS.gene017438:CDS 45.0%
GCTAGTGCAGCAAAACTAGT+GGG - chr5.1:61485912-61485931 MS.gene017438:CDS 45.0%
TACGCTCAGTGATTCCGATT+GGG - chr5.1:61486160-61486179 MS.gene017438:CDS 45.0%
TCCCACCACATAGTAGAAAG+TGG + chr5.1:61486020-61486039 None:intergenic 45.0%
TCCCACTTTCTACTATGTGG+TGG - chr5.1:61486015-61486034 MS.gene017438:intron 45.0%
TGAGGAGGACAATCTACTCA+AGG - chr5.1:61484911-61484930 MS.gene017438:CDS 45.0%
TGCTAGTGCAGCAAAACTAG+TGG - chr5.1:61485911-61485930 MS.gene017438:CDS 45.0%
TTCCAAATACCAACACGGTG+TGG - chr5.1:61485427-61485446 MS.gene017438:intron 45.0%
! ACATCATTGGCTGTTCTACC+CGG + chr5.1:61485708-61485727 None:intergenic 45.0%
! GATGGTCATTGATTGCTGCA+AGG - chr5.1:61485679-61485698 MS.gene017438:intron 45.0%
! GCAAAACTAGTGGGTGAAGA+TGG - chr5.1:61485921-61485940 MS.gene017438:CDS 45.0%
! GTTGATAAAGTTCGAGGTCG+AGG + chr5.1:61485849-61485868 None:intergenic 45.0%
! TACACAAACTTCTGGGGAAC+AGG - chr5.1:61485243-61485262 MS.gene017438:CDS 45.0%
!! GTGGGAGAGTTTGTTAAACG+TGG - chr5.1:61486034-61486053 MS.gene017438:intron 45.0%
AGGTGCATGGACATATGAGG+AGG - chr5.1:61484896-61484915 MS.gene017438:CDS 50.0%
CAATCGGAATCACTGAGCGT+AGG + chr5.1:61486161-61486180 None:intergenic 50.0%
CTACGCTCAGTGATTCCGAT+TGG - chr5.1:61486159-61486178 MS.gene017438:CDS 50.0%
GGTGATGCACAACCATGTGT+TGG - chr5.1:61485987-61486006 MS.gene017438:intron 50.0%
TTGATTGCTGCAAGGCTTCC+GGG - chr5.1:61485687-61485706 MS.gene017438:intron 50.0%
! AAGACCAGAGGCGTGAGAAA+AGG - chr5.1:61484876-61484895 MS.gene017438:CDS 50.0%
CCAACACGGTGTGGCGTAAA+TGG - chr5.1:61485436-61485455 MS.gene017438:intron 55.0%
CCATTTACGCCACACCGTGT+TGG + chr5.1:61485439-61485458 None:intergenic 55.0%
! CGCCACACCGTGTTGGTATT+TGG + chr5.1:61485432-61485451 None:intergenic 55.0%
! GAGGCGTGAGAAAAGGTGCA+TGG - chr5.1:61484883-61484902 MS.gene017438:CDS 55.0%
! TGCACCTTTTCTCACGCCTC+TGG + chr5.1:61484883-61484902 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 61484870 61486211 61484870 ID=MS.gene017438
chr5.1 mRNA 61484870 61486211 61484870 ID=MS.gene017438.t1;Parent=MS.gene017438
chr5.1 exon 61486094 61486211 61486094 ID=MS.gene017438.t1.exon1;Parent=MS.gene017438.t1
chr5.1 CDS 61486094 61486211 61486094 ID=cds.MS.gene017438.t1;Parent=MS.gene017438.t1
chr5.1 exon 61485817 61485946 61485817 ID=MS.gene017438.t1.exon2;Parent=MS.gene017438.t1
chr5.1 CDS 61485817 61485946 61485817 ID=cds.MS.gene017438.t1;Parent=MS.gene017438.t1
chr5.1 exon 61484870 61485401 61484870 ID=MS.gene017438.t1.exon3;Parent=MS.gene017438.t1
chr5.1 CDS 61484870 61485401 61484870 ID=cds.MS.gene017438.t1;Parent=MS.gene017438.t1
Gene Sequence

>MS.gene017438

ATGGAAAAGACCAGAGGCGTGAGAAAAGGTGCATGGACATATGAGGAGGACAATCTACTCAAGGCTTGTATTAACAAGTATGGTGAAGGAAAATGGCATTTAGTTCCTAAAAGAGCAGGTACTTGTATTTATTTAATTGATTTGTTGATAAGAACATTATATAACCATCTACATATCTATAGTTAGAACTAACTCATGAGAAACCATGCTTATATTCTAAATATAAATATATCTTATGTCAAAAATTATTAAACTGTATATGCAGGTTTGAATAGATGCCGGAAAAGTTGTAGATTGAGGTGGGTGAATTATTTAAACCCCGCAATCAAAAGAGAAACTTTCTCTCATGATGAAATTGATATGATTCTAAGGCTACACAAACTTCTGGGGAACAGGTATGTTATGAGAGCAAGTTATAATTAAATTGCTATTTGTACATATTAGGGGATATCCTTGTTAATTTAGATCTAGTAGTTTTTGTAATCTAGAATTAATTAATTAATTAATTAATTAATTAGTTATTCTAGCATATAGTAGTATTTTATTTTCACATATGCTTCCAAATACCAACACGGTGTGGCGTAAATGGTAGATGCTTGAATTTCTTAACTATTTGATACAAATTCAATCCCCAATCAGTGCGTATAGAAAAATATATGTTAAAAAAAGTCTCGCTTGAGCGATCTACAATTACATGTGGAGATTTTTATTTTATTTTTGTAAGAGATACCTTAGTTTAATATATATTTGTGCTTCCAAATTATAGTATATTTCATCTCTTTACTCTTATTATTTATAATAAATGTATAGATGGTCATTGATTGCTGCAAGGCTTCCGGGTAGAACAGCCAATGATGTGAAGAATTACTGGCACACAAATTTGCGCAAGAAAGTGATTCCAAAAAAAGAAGAAAATGAAGAAAAAGAGAAATCTAAAGAAAGCATGATAAAAATCAAATCTCATGAAATTATCAAGCCTCGACCTCGAACTTTATCAACTCATTCACTATGGTTGAAGAAGAAACATAATTTAGTGAGTAATGCTAGTGCAGCAAAACTAGTGGGTGAAGATGGCAATGTTCCAAGAGAGTGTGACAAGACTATACTCCCAAATATTGGTGATGCACAACCATGTGTTGGTAATCTCCCACTTTCTACTATGTGGTGGGAGAGTTTGTTAAACGTGGATGAAGAAAGAAGTAATGAGAAAATTGGCTCTTGCTCTTTATTACAAGAGGAGAATTTCACTTCAGAGTTTTCAAATGTGGAGGAATTTTTTAATAATGGTCCTACGCTCAGTGATTCCGATTGGGATTTCAATTCCTTTGGGGTCTTTAATTAG
Protein sequence

>MS.gene017438.t1

MEKTRGVRKGAWTYEEDNLLKACINKYGEGKWHLVPKRAGLNRCRKSCRLRWVNYLNPAIKRETFSHDEIDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTNLRKKVIPKKEENEEKEKSKESMIKIKSHEIIKPRPRTLSTHSLWLKKKHNLVSNASAAKLVGEDGNVPRECDKTILPNIGDAQPCVGNLPLSTMWWESLLNVDEERSNEKIGSCSLLQEENFTSEFSNVEEFFNNGPTLSDSDWDFNSFGVFN