AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89208

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89208.t1 MTR_5g078860 78.758 306 18 3 1 259 1 306 9.74e-158 440
MS.gene89208.t1 MTR_5g078800 75.812 277 37 4 1 259 1 265 3.02e-133 377
MS.gene89208.t1 MTR_5g079220 59.774 266 69 11 3 251 17 261 3.85e-87 260
MS.gene89208.t1 MTR_5g079290 54.613 271 81 8 1 253 11 257 1.55e-83 251
MS.gene89208.t1 MTR_5g079120 53.232 263 92 7 1 253 55 296 2.41e-81 246
MS.gene89208.t1 MTR_7g017260 52.381 273 93 10 1 252 19 275 2.40e-78 238
MS.gene89208.t1 MTR_0001s0360 53.137 271 81 10 1 253 1 243 2.72e-78 237
MS.gene89208.t1 MTR_8g060940 55.344 262 79 7 1 253 1 233 2.09e-74 227
MS.gene89208.t1 MTR_5g078950 48.881 268 94 7 1 239 1 254 1.92e-73 225
MS.gene89208.t1 MTR_5g078930 54.128 218 67 6 1 198 3 207 1.07e-66 206
MS.gene89208.t1 MTR_5g078910 63.736 182 44 4 1 173 1 169 2.79e-66 208
MS.gene89208.t1 MTR_0193s0090 51.961 204 71 6 1 196 1 185 5.52e-58 184
MS.gene89208.t1 MTR_0247s0040 69.930 143 35 2 1 136 1 142 1.37e-57 182
MS.gene89208.t1 MTR_0197s0010 42.667 225 97 6 11 209 5 223 7.80e-49 161
MS.gene89208.t1 MTR_0023s0210 74.699 83 21 0 1 83 1 83 1.64e-42 140
MS.gene89208.t1 MTR_4g125520 52.206 136 57 2 4 132 9 143 6.29e-40 140
MS.gene89208.t1 MTR_0008s0390 44.898 147 74 1 2 141 8 154 2.38e-38 135
MS.gene89208.t1 MTR_3g083540 56.881 109 40 1 4 105 38 146 2.94e-37 133
MS.gene89208.t1 MTR_0251s0050 48.299 147 64 2 2 141 8 149 2.96e-37 132
MS.gene89208.t1 MTR_0008s0470 51.562 128 55 1 2 122 8 135 7.09e-37 132
MS.gene89208.t1 MTR_7g115650 55.046 109 42 1 3 104 8 116 1.23e-36 129
MS.gene89208.t1 MTR_1g076150 47.287 129 61 1 3 124 8 136 2.84e-34 124
MS.gene89208.t1 MTR_2g089450 48.175 137 62 3 4 131 9 145 4.25e-34 124
MS.gene89208.t1 MTR_5g079670 54.128 109 43 1 4 105 8 116 6.75e-34 122
MS.gene89208.t1 MTR_7g117730 46.939 147 69 2 4 143 9 153 6.75e-34 123
MS.gene89208.t1 MTR_1g043080 50.909 110 47 1 3 105 8 117 9.36e-34 123
MS.gene89208.t1 MTR_1g043050 50.442 113 49 1 3 108 8 120 1.20e-33 122
MS.gene89208.t1 MTR_8g020490 55.140 107 41 1 5 104 6 112 1.24e-33 122
MS.gene89208.t1 MTR_4g100720 52.991 117 46 2 4 111 10 126 1.62e-33 120
MS.gene89208.t1 MTR_7g010210 53.704 108 43 1 4 104 9 116 2.64e-33 123
MS.gene89208.t1 MTR_8g027345 53.704 108 43 1 4 104 9 116 2.71e-33 123
MS.gene89208.t1 MTR_7g010210 53.704 108 43 1 4 104 9 116 3.14e-33 122
MS.gene89208.t1 MTR_4g091490 52.252 111 46 1 2 105 8 118 3.80e-33 124
MS.gene89208.t1 MTR_3g074520 39.444 180 78 3 4 168 9 172 4.70e-33 123
MS.gene89208.t1 MTR_4g073420 40.491 163 75 3 9 149 14 176 9.55e-33 121
MS.gene89208.t1 MTR_2g011660 52.252 111 46 1 2 105 8 118 1.16e-32 122
MS.gene89208.t1 MTR_1g100653 52.294 109 45 1 3 104 8 116 1.21e-32 121
MS.gene89208.t1 MTR_7g096930 46.212 132 62 2 3 125 8 139 1.26e-32 120
MS.gene89208.t1 MTR_5g029840 54.206 107 42 1 6 105 11 117 2.27e-32 121
MS.gene89208.t1 MTR_5g007370 51.376 109 46 1 4 105 9 117 3.14e-32 120
MS.gene89208.t1 MTR_3g097450 44.521 146 73 2 3 141 8 152 3.92e-32 119
MS.gene89208.t1 MTR_3g039990 48.413 126 58 1 3 121 9 134 8.01e-32 119
MS.gene89208.t1 MTR_4g478180 52.294 109 45 1 4 105 10 118 8.49e-32 120
MS.gene89208.t1 MTR_7g087130 53.211 109 44 1 3 104 8 116 2.60e-31 118
MS.gene89208.t1 MTR_4g105130 39.759 166 84 4 4 160 9 167 4.84e-31 118
MS.gene89208.t1 MTR_0140s0030 51.376 109 46 1 3 104 9 117 5.92e-31 117
MS.gene89208.t1 MTR_0489s0020 51.376 109 46 1 3 104 9 117 5.92e-31 117
MS.gene89208.t1 MTR_2g089420 41.606 137 72 2 6 135 10 145 8.66e-31 119
MS.gene89208.t1 MTR_2g089620 51.376 109 46 1 4 105 9 117 1.18e-30 116
MS.gene89208.t1 MTR_1g112760 49.541 109 48 1 4 105 10 118 2.81e-30 113
MS.gene89208.t1 MTR_7g110830 50.926 108 46 1 4 104 9 116 3.22e-30 116
MS.gene89208.t1 MTR_7g076740 51.376 109 45 2 4 104 9 117 4.35e-30 114
MS.gene89208.t1 MTR_2g034790 48.624 109 49 1 3 104 8 116 4.43e-30 115
MS.gene89208.t1 MTR_4g082290 50.459 109 47 1 3 104 8 116 5.35e-30 116
MS.gene89208.t1 MTR_1g085640 50.000 108 47 1 4 104 9 116 9.48e-30 115
MS.gene89208.t1 MTR_1g100667 48.696 115 52 1 8 115 14 128 1.23e-29 112
MS.gene89208.t1 MTR_4g121460 48.624 109 49 1 3 104 8 116 1.34e-29 114
MS.gene89208.t1 MTR_6g012180 52.941 102 41 1 4 98 9 110 1.46e-29 113
MS.gene89208.t1 MTR_4g082230 50.459 109 47 1 3 104 8 116 1.86e-29 114
MS.gene89208.t1 MTR_4g485530 50.943 106 45 1 9 107 14 119 2.72e-29 109
MS.gene89208.t1 MTR_3g077110 48.649 111 50 1 4 107 9 119 3.54e-29 113
MS.gene89208.t1 MTR_6g055910 48.246 114 52 1 3 109 10 123 3.72e-29 111
MS.gene89208.t1 MTR_8g017540 47.706 109 50 1 4 105 55 163 4.01e-29 114
MS.gene89208.t1 MTR_6g009430 48.624 109 49 1 4 105 9 117 4.02e-29 112
MS.gene89208.t1 MTR_0008s0280 49.057 106 47 1 4 102 9 114 4.49e-29 110
MS.gene89208.t1 MTR_8g017440 49.074 108 48 1 4 104 9 116 4.94e-29 112
MS.gene89208.t1 MTR_7g011170 48.624 109 49 1 3 104 8 116 6.61e-29 111
MS.gene89208.t1 MTR_1g085040 49.074 108 48 1 4 104 9 116 7.33e-29 112
MS.gene89208.t1 MTR_6g012690 50.000 108 47 1 4 104 9 116 8.96e-29 112
MS.gene89208.t1 MTR_8g095390 47.321 112 52 1 3 107 8 119 1.14e-28 111
MS.gene89208.t1 MTR_3g461490 47.706 109 50 1 3 104 8 116 1.46e-28 110
MS.gene89208.t1 MTR_8g017500 47.222 108 50 1 4 104 9 116 1.87e-28 111
MS.gene89208.t1 MTR_8g031360 49.107 112 49 2 2 105 8 119 2.04e-28 110
MS.gene89208.t1 MTR_2g099740 47.706 109 50 1 4 105 9 117 3.30e-28 111
MS.gene89208.t1 MTR_0063s0090 47.619 105 48 1 4 101 9 113 3.76e-28 107
MS.gene89208.t1 MTR_1g110460 37.073 205 106 7 7 200 26 218 3.85e-28 109
MS.gene89208.t1 MTR_1g017000 47.273 110 50 2 4 105 9 118 5.33e-28 107
MS.gene89208.t1 MTR_5g014990 43.802 121 60 2 4 116 9 129 5.80e-28 108
MS.gene89208.t1 MTR_3g103570 36.571 175 98 4 4 169 9 179 7.31e-28 109
MS.gene89208.t1 MTR_5g042030 46.429 112 53 1 1 105 1 112 9.79e-28 108
MS.gene89208.t1 MTR_1g017140 37.500 152 84 3 4 144 9 160 1.11e-27 108
MS.gene89208.t1 MTR_3g052430 48.077 104 47 1 7 103 41 144 2.61e-27 110
MS.gene89208.t1 MTR_2g064160 45.045 111 54 1 4 107 8 118 3.01e-27 107
MS.gene89208.t1 MTR_7g111290 52.475 101 41 1 4 97 9 109 6.99e-27 107
MS.gene89208.t1 MTR_3g052450 47.115 104 48 1 7 103 40 143 1.12e-26 108
MS.gene89208.t1 MTR_8g098860 45.370 108 52 1 4 104 9 116 1.38e-26 105
MS.gene89208.t1 MTR_3g011610 46.667 105 49 1 7 104 37 141 1.89e-26 107
MS.gene89208.t1 MTR_8g017390 47.273 110 50 2 4 105 9 118 2.32e-26 107
MS.gene89208.t1 MTR_7g102110 47.059 119 55 2 4 114 9 127 2.33e-26 103
MS.gene89208.t1 MTR_4g102380 47.706 109 50 1 4 105 9 117 4.54e-26 103
MS.gene89208.t1 MTR_8g042410 48.077 104 47 1 7 103 37 140 4.64e-26 106
MS.gene89208.t1 MTR_8g017340 46.364 110 51 2 4 105 9 118 4.87e-26 106
MS.gene89208.t1 MTR_8g017350 46.364 110 51 2 4 105 9 118 6.87e-26 106
MS.gene89208.t1 MTR_4g097570 35.593 177 98 6 4 171 9 178 8.25e-26 103
MS.gene89208.t1 MTR_2g097910 44.762 105 51 1 7 104 20 124 9.21e-26 103
MS.gene89208.t1 MTR_1g045610 44.000 125 60 2 8 125 22 143 1.07e-25 102
MS.gene89208.t1 MTR_4g065017 45.714 105 50 1 7 104 17 121 1.24e-25 103
MS.gene89208.t1 MTR_7g035075 43.590 117 57 2 7 116 14 128 1.28e-25 100
MS.gene89208.t1 MTR_3g065440 49.074 108 48 1 4 104 9 116 1.33e-25 102
MS.gene89208.t1 MTR_5g078140 49.074 108 48 1 4 104 9 116 1.35e-25 102
MS.gene89208.t1 MTR_6g090405 46.364 110 51 2 4 105 9 118 1.36e-25 101
MS.gene89208.t1 MTR_1g021230 48.077 104 47 1 7 103 57 160 3.76e-25 103
MS.gene89208.t1 MTR_2g067420 46.078 102 48 1 4 98 11 112 3.88e-25 102
MS.gene89208.t1 MTR_5g007300 55.000 80 36 0 4 83 61 140 5.20e-25 97.1
MS.gene89208.t1 MTR_2g096380 44.037 109 54 1 7 108 6 114 5.36e-25 99.8
MS.gene89208.t1 MTR_4g057635 45.133 113 54 2 4 108 9 121 9.03e-25 100
MS.gene89208.t1 MTR_2g088170 45.455 110 53 1 1 103 23 132 9.91e-25 102
MS.gene89208.t1 MTR_1g086510 46.364 110 52 1 2 104 16 125 1.05e-24 99.4
MS.gene89208.t1 MTR_1g073170 43.902 123 59 2 8 123 21 140 1.07e-24 99.4
MS.gene89208.t1 MTR_3g028740 43.519 108 54 1 4 104 19 126 1.22e-24 100
MS.gene89208.t1 MTR_1g083630 47.619 105 48 1 7 104 12 116 1.60e-24 102
MS.gene89208.t1 MTR_6g006030 45.714 105 50 1 7 104 14 118 2.61e-24 97.1
MS.gene89208.t1 MTR_5g010020 45.098 102 49 1 4 98 9 110 3.20e-24 99.8
MS.gene89208.t1 MTR_4g097570 35.393 178 98 7 4 171 9 179 3.98e-24 98.6
MS.gene89208.t1 MTR_4g063100 44.660 103 50 1 8 103 8 110 5.05e-24 97.4
MS.gene89208.t1 MTR_1g062940 45.045 111 54 1 7 110 6 116 5.62e-24 96.3
MS.gene89208.t1 MTR_7g109320 45.872 109 52 1 3 104 8 116 5.69e-24 99.4
MS.gene89208.t1 MTR_2g095520 47.573 103 46 2 4 98 9 111 1.49e-23 97.4
MS.gene89208.t1 MTR_4g128670 47.573 103 46 2 4 98 9 111 2.18e-23 97.4
MS.gene89208.t1 MTR_1g086530 44.762 105 51 1 7 104 33 137 4.23e-23 95.5
MS.gene89208.t1 MTR_5g088080 41.748 103 52 1 8 102 13 115 6.31e-22 92.0
MS.gene89208.t1 MTR_5g088150 41.748 103 52 1 8 102 13 115 6.31e-22 92.0
MS.gene89208.t1 MTR_5g488210 41.748 103 52 1 8 102 13 115 6.31e-22 92.0
MS.gene89208.t1 MTR_5g488170 41.748 103 52 1 8 102 13 115 7.15e-22 91.3
MS.gene89208.t1 MTR_5g088640 41.748 103 52 1 8 102 13 115 9.02e-22 91.7
MS.gene89208.t1 MTR_5g062790 41.284 109 54 2 8 108 10 116 1.80e-21 91.7
MS.gene89208.t1 MTR_0023s0260 38.674 181 87 8 82 251 8 175 4.64e-21 87.8
MS.gene89208.t1 MTR_5g079140 42.520 127 47 4 79 196 9 118 6.57e-21 86.3
MS.gene89208.t1 MTR_1g026870 40.952 105 54 2 7 104 83 186 2.10e-20 90.9
MS.gene89208.t1 MTR_2g033170 45.714 105 50 1 7 104 24 128 2.69e-20 88.6
MS.gene89208.t1 MTR_4g019370 38.793 116 63 2 9 117 38 152 5.48e-20 88.2
MS.gene89208.t1 MTR_5g088610 40.777 103 53 1 8 102 10 112 7.44e-20 87.8
MS.gene89208.t1 MTR_3g045430 39.091 110 60 1 2 104 8 117 1.51e-19 86.3
MS.gene89208.t1 MTR_6g055910 50.649 77 31 1 40 109 18 94 5.57e-19 84.0
MS.gene89208.t1 MTR_4g123040 44.444 108 53 1 2 102 19 126 5.73e-19 84.7
MS.gene89208.t1 MTR_5g041570 41.176 102 52 2 9 103 134 234 7.48e-19 85.5
MS.gene89208.t1 MTR_4g082040 40.196 102 53 2 9 103 105 205 9.09e-19 85.5
MS.gene89208.t1 MTR_5g016510 40.196 102 53 2 9 103 5 105 1.11e-18 84.0
MS.gene89208.t1 MTR_4g094982 40.196 102 53 2 9 103 5 105 1.44e-18 83.2
MS.gene89208.t1 MTR_5g049190 31.414 191 108 6 4 187 14 188 1.58e-18 82.4
MS.gene89208.t1 MTR_3g110028 38.095 105 57 2 7 104 83 186 3.29e-18 84.3
MS.gene89208.t1 MTR_7g061330 40.952 105 54 2 7 104 111 214 6.17e-18 83.2
MS.gene89208.t1 MTR_7g461410 40.952 105 54 2 7 104 111 214 6.17e-18 83.2
MS.gene89208.t1 MTR_4g128190 39.623 106 43 2 5 102 9 101 8.07e-18 80.5
MS.gene89208.t1 MTR_7g037260 40.187 107 56 2 9 108 145 250 9.34e-18 82.0
MS.gene89208.t1 MTR_7g061330 40.952 105 54 2 7 104 75 178 1.09e-17 82.4
MS.gene89208.t1 MTR_3g077650 32.500 160 97 4 1 151 173 330 2.86e-17 81.3
MS.gene89208.t1 MTR_3g089045 37.008 127 67 3 2 121 9 129 3.53e-17 79.7
MS.gene89208.t1 MTR_4g105660 38.596 114 60 3 2 107 173 284 4.62e-17 80.5
MS.gene89208.t1 MTR_5g070020 33.540 161 89 5 2 151 115 268 5.84e-17 79.7
MS.gene89208.t1 MTR_1g057980 39.252 107 57 2 2 101 73 178 7.97e-17 78.6
MS.gene89208.t1 MTR_3g101290 37.864 103 56 2 9 104 37 138 9.37e-17 77.4
MS.gene89208.t1 MTR_8g006470 40.179 112 57 3 4 107 7 116 1.67e-16 77.4
MS.gene89208.t1 MTR_4g088015 33.333 150 76 3 3 129 215 363 1.85e-16 78.6
MS.gene89208.t1 MTR_7g086960 41.176 102 52 2 9 103 89 189 2.02e-16 78.2
MS.gene89208.t1 MTR_3g463400 37.615 109 60 2 7 108 131 238 2.25e-16 78.6
MS.gene89208.t1 MTR_2g096380 48.052 77 33 1 39 108 19 95 3.29e-16 75.5
MS.gene89208.t1 MTR_7g111290 53.030 66 24 1 39 97 2 67 4.22e-16 77.0
MS.gene89208.t1 MTR_6g074860 37.624 101 55 2 9 102 4 103 5.21e-16 75.5
MS.gene89208.t1 MTR_6g027360 40.404 99 51 2 7 98 76 173 1.08e-15 75.5
MS.gene89208.t1 MTR_6g015455 39.623 106 48 3 9 103 5 105 1.12e-15 77.0
MS.gene89208.t1 MTR_1g085880 41.121 107 54 2 5 102 9 115 1.13e-15 73.6
MS.gene89208.t1 MTR_6g027340 40.206 97 50 2 9 98 16 111 1.20e-15 73.9
MS.gene89208.t1 MTR_4g063100 48.611 72 30 1 39 103 10 81 1.69e-15 73.9
MS.gene89208.t1 MTR_1g085770 41.121 107 54 2 5 102 9 115 2.28e-15 74.7
MS.gene89208.t1 MTR_7g061550 41.667 96 47 2 12 98 10 105 2.52e-15 75.1
MS.gene89208.t1 MTR_6g027370 39.216 102 54 2 9 103 99 199 2.74e-15 74.7
MS.gene89208.t1 MTR_7g451170 37.383 107 59 2 9 108 191 296 2.99e-15 75.1
MS.gene89208.t1 MTR_4g029540 30.168 179 102 6 7 174 10 176 4.64e-15 73.6
MS.gene89208.t1 MTR_7g035350 39.000 100 53 2 9 101 225 323 2.90e-14 72.4
MS.gene89208.t1 MTR_5g082910 36.893 103 49 3 9 100 19 116 2.32e-13 68.6
MS.gene89208.t1 MTR_7g037130 36.364 110 60 3 9 111 145 251 4.81e-13 68.6
MS.gene89208.t1 MTR_5g010650 29.379 177 105 6 7 171 108 276 7.49e-13 68.2
MS.gene89208.t1 MTR_7g450950 28.873 142 92 3 9 143 157 296 2.23e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89208.t1 AT1G66370 48.261 230 77 8 2 209 3 212 3.85e-53 172
MS.gene89208.t1 AT1G56650 59.155 142 48 2 5 136 6 147 9.74e-44 149
MS.gene89208.t1 AT1G66390 45.909 220 94 5 5 211 6 213 2.14e-43 147
MS.gene89208.t1 AT1G66380 71.560 109 24 1 5 106 6 114 5.51e-43 143
MS.gene89208.t1 AT3G13540 55.046 109 42 1 4 105 20 128 3.40e-37 132
MS.gene89208.t1 AT5G14750 40.606 165 85 4 8 164 17 176 4.96e-35 125
MS.gene89208.t1 AT5G16770 55.963 109 41 1 4 105 9 117 5.63e-35 128
MS.gene89208.t1 AT5G16770 55.963 109 41 1 4 105 9 117 5.63e-35 128
MS.gene89208.t1 AT3G23250 37.611 226 119 7 3 210 8 229 6.16e-35 127
MS.gene89208.t1 AT5G16770 55.963 109 41 1 4 105 9 117 6.32e-35 128
MS.gene89208.t1 AT5G16770 55.963 109 41 1 4 105 9 117 6.32e-35 128
MS.gene89208.t1 AT3G27920 53.333 105 42 1 8 105 15 119 1.81e-34 124
MS.gene89208.t1 AT5G40330 52.294 109 45 1 3 104 8 116 2.94e-34 123
MS.gene89208.t1 AT1G22640 51.786 112 47 1 3 107 8 119 4.64e-34 124
MS.gene89208.t1 AT5G60890 53.211 109 44 1 3 104 8 116 6.84e-34 124
MS.gene89208.t1 AT4G09460 43.662 142 73 1 9 143 14 155 8.85e-34 122
MS.gene89208.t1 AT3G02940 55.046 109 42 1 4 105 9 117 1.07e-33 124
MS.gene89208.t1 AT3G02940 55.046 109 42 1 4 105 9 117 1.47e-33 124
MS.gene89208.t1 AT3G02940 55.046 109 42 1 4 105 9 117 1.47e-33 124
MS.gene89208.t1 AT4G17785 53.153 111 45 1 2 105 8 118 1.83e-33 124
MS.gene89208.t1 AT4G38620 55.660 106 40 1 9 107 14 119 1.86e-33 123
MS.gene89208.t1 AT4G17785 53.153 111 45 1 2 105 8 118 1.93e-33 124
MS.gene89208.t1 AT1G66380 75.949 79 19 0 5 83 6 84 4.10e-33 117
MS.gene89208.t1 AT5G65230 54.206 107 42 1 6 105 11 117 2.00e-32 120
MS.gene89208.t1 AT5G35550 47.899 119 54 2 3 114 10 127 3.08e-32 119
MS.gene89208.t1 AT4G05100 51.351 111 47 1 2 105 8 118 4.58e-32 120
MS.gene89208.t1 AT5G10280 40.476 168 77 2 1 161 6 157 4.83e-32 120
MS.gene89208.t1 AT3G47600 54.630 108 42 1 4 104 9 116 5.15e-32 120
MS.gene89208.t1 AT5G07700 52.778 108 44 1 5 105 10 117 5.95e-32 120
MS.gene89208.t1 AT5G07700 52.778 108 44 1 5 105 10 117 5.95e-32 120
MS.gene89208.t1 AT4G21440 51.818 110 46 1 3 105 8 117 6.18e-32 120
MS.gene89208.t1 AT1G18570 52.294 109 45 1 6 107 12 120 7.17e-32 120
MS.gene89208.t1 AT1G08810 47.656 128 58 2 4 124 9 134 8.11e-32 118
MS.gene89208.t1 AT3G48920 45.161 124 61 1 1 117 12 135 9.92e-32 118
MS.gene89208.t1 AT5G61420 50.926 108 46 1 5 105 10 117 9.98e-32 120
MS.gene89208.t1 AT3G30210 34.884 215 119 6 6 211 26 228 1.12e-31 118
MS.gene89208.t1 AT5G07690 50.909 110 47 1 5 107 10 119 1.18e-31 119
MS.gene89208.t1 AT2G16720 49.107 112 50 1 3 107 8 119 1.68e-31 117
MS.gene89208.t1 AT5G62470 50.847 118 51 1 3 113 8 125 1.98e-31 119
MS.gene89208.t1 AT3G61250 49.580 119 48 2 4 110 9 127 2.27e-31 117
MS.gene89208.t1 AT1G34670 53.211 109 44 1 4 105 9 117 2.39e-31 119
MS.gene89208.t1 AT3G28910 53.704 108 43 1 4 104 9 116 3.24e-31 118
MS.gene89208.t1 AT1G57560 31.786 280 165 6 4 258 9 287 4.84e-31 117
MS.gene89208.t1 AT1G74650 50.893 112 48 1 7 111 12 123 4.88e-31 117
MS.gene89208.t1 AT4G01680 51.852 108 45 1 4 104 9 116 5.33e-31 115
MS.gene89208.t1 AT1G74080 47.321 112 52 1 3 107 8 119 6.35e-31 117
MS.gene89208.t1 AT1G06180 47.500 120 56 1 3 115 8 127 7.49e-31 115
MS.gene89208.t1 AT5G54230 51.887 106 44 1 7 105 12 117 8.09e-31 117
MS.gene89208.t1 AT4G34990 51.923 104 43 1 9 105 14 117 8.91e-31 115
MS.gene89208.t1 AT5G52600 48.739 119 54 1 2 113 7 125 9.05e-31 114
MS.gene89208.t1 AT4G28110 48.624 109 49 1 4 105 9 117 9.32e-31 115
MS.gene89208.t1 AT1G35515 41.026 156 67 4 3 144 8 152 9.79e-31 114
MS.gene89208.t1 AT2G31180 50.459 109 47 1 3 104 8 116 1.00e-30 115
MS.gene89208.t1 AT4G01680 51.351 111 47 1 4 107 9 119 1.46e-30 116
MS.gene89208.t1 AT3G01140 51.376 109 46 1 4 105 9 117 2.28e-30 116
MS.gene89208.t1 AT3G01140 51.376 109 46 1 4 105 52 160 4.90e-30 116
MS.gene89208.t1 AT5G15310 50.459 109 47 1 4 105 9 117 5.24e-30 115
MS.gene89208.t1 AT1G16490 44.000 125 63 1 4 121 11 135 5.38e-30 114
MS.gene89208.t1 AT5G15310 50.459 109 47 1 4 105 9 117 5.56e-30 114
MS.gene89208.t1 AT5G62470 50.847 118 50 2 3 113 8 124 7.33e-30 115
MS.gene89208.t1 AT5G15310 50.459 109 47 1 4 105 9 117 9.85e-30 112
MS.gene89208.t1 AT1G57560 32.601 273 133 7 4 258 9 248 1.25e-29 112
MS.gene89208.t1 AT5G49330 48.624 109 49 1 3 104 8 116 1.25e-29 114
MS.gene89208.t1 AT1G74430 50.943 106 45 1 6 104 11 116 1.41e-29 112
MS.gene89208.t1 AT3G13890 47.706 109 50 1 4 105 9 117 2.77e-29 113
MS.gene89208.t1 AT5G26660 50.000 108 47 1 4 104 9 116 3.23e-29 113
MS.gene89208.t1 AT5G56110 49.541 109 48 1 3 104 8 116 3.32e-29 112
MS.gene89208.t1 AT5G57620 45.600 125 60 2 4 120 9 133 1.24e-28 111
MS.gene89208.t1 AT5G23000 38.150 173 91 4 4 168 9 173 1.24e-28 111
MS.gene89208.t1 AT1G09540 47.748 111 51 1 4 107 9 119 2.20e-28 111
MS.gene89208.t1 AT3G46130 46.087 115 55 1 1 108 3 117 2.32e-28 108
MS.gene89208.t1 AT2G32460 49.057 106 47 1 5 103 16 121 4.70e-28 112
MS.gene89208.t1 AT2G32460 49.057 106 47 1 5 103 4 109 5.29e-28 111
MS.gene89208.t1 AT2G26960 49.057 106 47 1 4 102 17 122 5.99e-28 111
MS.gene89208.t1 AT5G62320 39.264 163 82 4 6 151 12 174 6.22e-28 107
MS.gene89208.t1 AT3G28470 49.020 102 45 1 4 98 9 110 6.65e-28 109
MS.gene89208.t1 AT3G62610 35.294 187 87 4 3 174 8 175 9.40e-28 109
MS.gene89208.t1 AT1G18710 49.057 106 47 1 6 104 11 116 9.54e-28 107
MS.gene89208.t1 AT5G55020 51.456 103 43 1 7 102 26 128 1.02e-27 111
MS.gene89208.t1 AT5G65790 45.385 130 61 3 4 123 9 138 1.08e-27 109
MS.gene89208.t1 AT4G26930 50.485 103 44 1 7 102 19 121 1.41e-27 109
MS.gene89208.t1 AT1G25340 41.209 182 76 5 8 160 19 198 1.51e-27 107
MS.gene89208.t1 AT5G59780 48.148 108 49 1 8 108 9 116 1.57e-27 106
MS.gene89208.t1 AT3G12720 41.538 130 64 2 4 126 19 143 1.82e-27 107
MS.gene89208.t1 AT4G01680 46.341 123 47 2 4 107 9 131 3.74e-27 107
MS.gene89208.t1 AT2G47460 44.954 109 53 1 3 104 8 116 3.78e-27 108
MS.gene89208.t1 AT4G25560 49.515 103 45 1 8 103 11 113 4.09e-27 106
MS.gene89208.t1 AT1G79180 46.296 108 51 1 4 104 11 118 4.18e-27 106
MS.gene89208.t1 AT4G37780 45.133 113 54 2 4 108 9 121 4.32e-27 106
MS.gene89208.t1 AT1G56160 45.455 110 53 1 4 106 11 120 6.50e-27 106
MS.gene89208.t1 AT5G12870 44.860 107 52 1 5 104 16 122 7.76e-27 105
MS.gene89208.t1 AT3G01530 46.364 110 52 1 2 104 20 129 8.26e-27 103
MS.gene89208.t1 AT3G49690 47.899 119 52 3 4 112 9 127 8.50e-27 106
MS.gene89208.t1 AT3G11440 44.444 108 53 1 3 103 37 144 1.23e-26 107
MS.gene89208.t1 AT3G11440 44.444 108 53 1 3 103 37 144 2.00e-26 107
MS.gene89208.t1 AT3G11440 44.444 108 53 1 3 103 37 144 2.00e-26 107
MS.gene89208.t1 AT3G11440 44.444 108 53 1 3 103 37 144 2.00e-26 107
MS.gene89208.t1 AT3G13890 44.068 118 50 2 4 105 9 126 2.46e-26 105
MS.gene89208.t1 AT3G12820 44.144 111 55 1 4 107 11 121 2.88e-26 103
MS.gene89208.t1 AT3G24310 44.094 127 61 2 4 123 15 138 3.21e-26 103
MS.gene89208.t1 AT4G13480 48.305 118 53 2 8 118 7 123 3.41e-26 103
MS.gene89208.t1 AT2G47190 44.545 110 54 1 2 104 15 124 3.66e-26 103
MS.gene89208.t1 AT5G52260 51.402 107 45 1 4 103 9 115 6.33e-26 102
MS.gene89208.t1 AT5G06100 43.810 105 52 1 6 103 31 135 7.69e-26 105
MS.gene89208.t1 AT5G40350 33.516 182 110 4 7 180 17 195 1.34e-25 100
MS.gene89208.t1 AT5G06100 43.810 105 52 1 6 103 31 135 1.38e-25 105
MS.gene89208.t1 AT5G06100 43.810 105 52 1 6 103 31 135 1.38e-25 105
MS.gene89208.t1 AT5G06100 43.810 105 52 1 6 103 31 135 1.38e-25 105
MS.gene89208.t1 AT5G06100 43.810 105 52 1 6 103 31 135 1.38e-25 105
MS.gene89208.t1 AT1G63910 44.444 108 53 1 4 104 9 116 1.61e-25 103
MS.gene89208.t1 AT1G68320 50.476 105 45 1 7 104 19 123 1.76e-25 102
MS.gene89208.t1 AT3G53200 46.364 110 52 1 1 103 3 112 2.06e-25 100
MS.gene89208.t1 AT4G22680 46.789 109 51 1 4 105 9 117 2.33e-25 101
MS.gene89208.t1 AT1G66230 48.148 108 49 1 4 104 9 116 3.15e-25 101
MS.gene89208.t1 AT5G14340 47.222 108 50 1 4 104 21 128 5.21e-25 100
MS.gene89208.t1 AT3G08500 45.370 108 52 1 4 104 27 134 5.56e-25 101
MS.gene89208.t1 AT1G48000 48.544 103 46 1 7 102 32 134 1.73e-24 98.6
MS.gene89208.t1 AT5G16600 47.222 108 50 1 4 104 9 116 2.38e-24 99.8
MS.gene89208.t1 AT1G25340 40.110 182 73 6 8 160 19 193 2.82e-24 98.6
MS.gene89208.t1 AT4G12350 45.283 106 51 1 7 105 12 117 3.91e-24 98.6
MS.gene89208.t1 AT3G27810 44.762 105 51 1 7 104 20 124 5.23e-24 96.7
MS.gene89208.t1 AT1G25340 40.110 182 73 6 8 160 19 193 5.86e-24 98.6
MS.gene89208.t1 AT2G36890 47.273 110 50 2 4 105 9 118 6.19e-24 98.2
MS.gene89208.t1 AT2G36890 47.273 110 50 2 4 105 50 159 6.50e-24 99.0
MS.gene89208.t1 AT5G14750 40.299 134 64 5 34 159 12 137 5.08e-23 92.8
MS.gene89208.t1 AT1G69560 35.971 139 77 3 4 135 102 235 9.48e-23 95.5
MS.gene89208.t1 AT1G69560 35.971 139 77 3 4 135 118 251 1.07e-22 95.5
MS.gene89208.t1 AT2G26950 40.517 116 59 2 1 106 10 125 2.51e-22 95.1
MS.gene89208.t1 AT5G11510 42.857 105 52 2 7 104 79 182 9.69e-22 94.7
MS.gene89208.t1 AT5G11510 42.857 105 52 2 7 104 79 182 9.69e-22 94.7
MS.gene89208.t1 AT5G11510 42.857 105 52 2 7 104 79 182 9.69e-22 94.7
MS.gene89208.t1 AT1G66380 69.444 72 15 1 39 103 7 78 1.75e-21 86.7
MS.gene89208.t1 AT5G11510 42.857 105 52 2 7 104 79 182 1.79e-21 94.0
MS.gene89208.t1 AT5G11510 42.857 105 52 2 7 104 79 182 2.05e-21 93.6
MS.gene89208.t1 AT1G79180 34.752 141 52 2 4 104 11 151 5.97e-21 90.5
MS.gene89208.t1 AT3G06490 45.045 111 54 1 1 104 13 123 2.96e-20 88.6
MS.gene89208.t1 AT5G35550 51.220 82 32 2 40 114 50 130 4.44e-20 87.0
MS.gene89208.t1 AT4G18770 41.026 117 53 3 3 108 211 322 2.37e-19 87.0
MS.gene89208.t1 AT1G26780 42.308 104 52 2 7 103 96 198 3.12e-19 85.1
MS.gene89208.t1 AT1G26780 42.308 104 52 2 7 103 96 198 3.16e-19 86.3
MS.gene89208.t1 AT5G49620 44.037 109 54 1 1 102 20 128 3.88e-19 85.1
MS.gene89208.t1 AT3G47600 58.333 72 23 1 40 104 39 110 4.42e-19 85.5
MS.gene89208.t1 AT3G53200 51.948 77 30 1 34 103 3 79 5.31e-19 82.8
MS.gene89208.t1 AT3G09230 42.308 104 52 2 9 105 55 157 5.37e-19 85.9
MS.gene89208.t1 AT4G37260 41.176 102 52 2 9 103 13 113 5.69e-19 85.1
MS.gene89208.t1 AT5G02320 40.000 105 55 2 7 104 125 228 7.77e-19 85.9
MS.gene89208.t1 AT5G02320 40.000 105 55 2 7 104 125 228 7.77e-19 85.9
MS.gene89208.t1 AT5G26660 48.052 77 33 1 35 104 9 85 1.07e-18 84.3
MS.gene89208.t1 AT5G02320 40.000 105 55 2 7 104 65 168 1.27e-18 85.1
MS.gene89208.t1 AT3G09370 40.385 104 54 2 7 103 128 230 1.36e-18 85.1
MS.gene89208.t1 AT3G09370 40.385 104 54 2 7 103 133 235 1.43e-18 85.1
MS.gene89208.t1 AT4G32730 39.048 105 56 2 7 104 85 188 1.48e-18 85.5
MS.gene89208.t1 AT4G32730 39.048 105 56 2 7 104 85 188 1.48e-18 85.5
MS.gene89208.t1 AT4G32730 39.048 105 56 2 7 104 85 188 1.48e-18 85.5
MS.gene89208.t1 AT4G32730 39.048 105 56 2 7 104 85 188 1.48e-18 85.5
MS.gene89208.t1 AT4G32730 39.048 105 56 2 7 104 85 188 1.58e-18 85.1
MS.gene89208.t1 AT3G09370 40.385 104 54 2 7 103 141 243 2.20e-18 84.7
MS.gene89208.t1 AT3G55730 42.157 102 51 2 9 103 56 156 3.11e-18 83.6
MS.gene89208.t1 AT2G23290 41.176 102 52 2 9 103 13 113 4.98e-18 82.0
MS.gene89208.t1 AT2G39880 41.509 106 46 3 9 103 50 150 7.50e-18 82.4
MS.gene89208.t1 AT5G59780 50.000 78 32 1 38 108 18 95 1.01e-17 79.7
MS.gene89208.t1 AT3G46130 50.000 78 32 1 38 108 18 95 1.46e-17 79.7
MS.gene89208.t1 AT2G37630 40.517 116 54 3 12 118 7 116 1.82e-17 81.3
MS.gene89208.t1 AT3G12820 48.611 72 30 1 43 107 2 73 1.94e-17 78.6
MS.gene89208.t1 AT5G17800 34.127 126 72 3 9 127 93 214 2.20e-17 80.5
MS.gene89208.t1 AT4G33450 33.333 135 78 3 3 130 13 142 2.31e-17 79.3
MS.gene89208.t1 AT3G46130 49.351 77 32 1 39 108 9 85 3.59e-17 78.6
MS.gene89208.t1 AT5G67300 41.176 102 52 2 9 103 6 106 3.88e-17 79.7
MS.gene89208.t1 AT3G60460 39.815 108 57 2 3 102 7 114 4.39e-17 79.3
MS.gene89208.t1 AT1G17950 37.500 112 56 3 9 107 5 115 6.45e-17 78.2
MS.gene89208.t1 AT5G49620 39.024 123 54 1 1 102 20 142 6.71e-17 79.3
MS.gene89208.t1 AT5G58850 36.522 115 65 2 5 112 101 214 7.80e-17 79.7
MS.gene89208.t1 AT3G27785 38.889 108 58 2 3 103 183 289 1.52e-16 79.0
MS.gene89208.t1 AT3G50060 34.375 128 68 3 9 121 6 132 2.08e-16 77.4
MS.gene89208.t1 AT1G73410 39.252 107 49 3 9 104 6 107 1.08e-15 74.7
MS.gene89208.t1 AT5G11050 35.135 111 64 2 5 108 101 210 2.00e-15 75.9
MS.gene89208.t1 AT5G40350 30.872 149 92 4 40 180 5 150 2.29e-15 72.4
MS.gene89208.t1 AT3G29020 37.500 104 55 3 9 104 65 166 2.29e-15 73.6
MS.gene89208.t1 AT3G29020 37.500 104 55 3 9 104 67 168 2.32e-15 74.7
MS.gene89208.t1 AT1G73410 39.252 107 49 3 9 104 6 107 2.83e-15 72.8
MS.gene89208.t1 AT5G14750 36.522 115 60 4 53 159 1 110 8.62e-15 70.1
MS.gene89208.t1 AT5G14750 36.522 115 60 4 53 159 1 110 8.62e-15 70.1
MS.gene89208.t1 AT5G39700 37.719 114 62 3 2 108 49 160 9.23e-15 71.2
MS.gene89208.t1 AT5G40360 37.037 108 60 2 2 102 151 257 1.72e-14 72.8
MS.gene89208.t1 AT3G27810 32.308 130 64 3 40 162 4 116 1.97e-14 69.7
MS.gene89208.t1 AT1G71030 47.059 68 29 1 45 105 4 71 3.60e-14 69.3
MS.gene89208.t1 AT1G71030 47.059 68 29 1 45 105 18 85 4.21e-14 69.3
MS.gene89208.t1 AT3G23250 34.254 181 87 9 53 210 1 172 4.38e-14 70.1
MS.gene89208.t1 AT2G25230 36.449 107 60 2 3 102 20 125 4.45e-13 67.4
MS.gene89208.t1 AT1G18960 34.951 103 57 3 9 104 10 109 9.52e-13 67.4
MS.gene89208.t1 AT1G22640 46.774 62 26 1 53 107 1 62 1.08e-12 65.5
MS.gene89208.t1 AT4G00540 36.111 108 58 3 7 104 101 207 1.33e-12 67.4
MS.gene89208.t1 AT4G00540 36.111 108 58 3 7 104 99 205 1.77e-12 67.0
MS.gene89208.t1 AT5G40430 35.514 107 60 3 3 102 48 152 1.16e-11 63.5

Find 58 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTCTTTATTACAAAA+TGG 0.152251 5.2:-67289139 MS.gene89208:CDS
GAAGAAGAATCAATGAGATT+TGG 0.252949 5.2:+67289373 None:intergenic
CCAATCGGAATCACTGAGTA+TGG 0.260359 5.2:+67289066 None:intergenic
CTAATGATGTGAAGAATTAT+TGG 0.279813 5.2:-67289528 MS.gene89208:CDS
GATTGGGATTTCAATTCCTT+TGG 0.296288 5.2:-67289049 MS.gene89208:CDS
TCTAAGGTTACACAAACTTC+TGG 0.313574 5.2:-67289691 MS.gene89208:CDS
AAGAAGAATCAATGAGATTT+GGG 0.321143 5.2:+67289374 None:intergenic
ATGAAATTGATATGATTCTA+AGG 0.328127 5.2:-67289707 MS.gene89208:CDS
ACAAGTATGGTGAAGGAAAA+TGG 0.332221 5.2:-67289929 MS.gene89208:CDS
GTTTGTGCATCACCAACATT+TGG 0.334779 5.2:+67289247 None:intergenic
GAAAGAAGCAATGAGAAAAT+TGG 0.341266 5.2:-67289163 MS.gene89208:CDS
AAACTTTCTCTGTTGATTGC+GGG 0.342162 5.2:+67289738 None:intergenic
TTGATTGCTGCAAGGCTTCC+GGG 0.348445 5.2:-67289559 MS.gene89208:intron
ATTGGGATTTCAATTCCTTT+GGG 0.360516 5.2:-67289048 MS.gene89208:CDS
CTTGCTCTTTATTACAAAAT+GGG 0.361773 5.2:-67289138 MS.gene89208:CDS
ATTGATTGCTGCAAGGCTTC+CGG 0.362167 5.2:-67289560 MS.gene89208:intron
ATACACATACCTGTTCGTTT+AGG 0.382825 5.2:+67289897 None:intergenic
CTTGAAGCTACTAGTGTTGT+TGG 0.388628 5.2:+67289313 None:intergenic
AAGGCTTGCATTCACAAGTA+TGG 0.417862 5.2:-67289942 MS.gene89208:CDS
ACATATATACAGGTTTGAAT+AGG 0.418111 5.2:-67289803 MS.gene89208:intron
CTAAGGTTACACAAACTTCT+GGG 0.424688 5.2:-67289690 MS.gene89208:CDS
AAGAAGAAAGGTTTGAGAAA+AGG 0.430002 5.2:-67289996 MS.gene89208:CDS
GTAGTCTTGTCACACTCTCT+TGG 0.452231 5.2:+67289274 None:intergenic
TTTGTGCATCACCAACATTT+GGG 0.457944 5.2:+67289248 None:intergenic
CATTTAGTTCCTAAACGAAC+AGG 0.459270 5.2:-67289906 MS.gene89208:intron
TCCCACCATGTCGTAGATGA+TGG 0.474554 5.2:+67289208 None:intergenic
AATCATATCAATTTCATCCT+CGG 0.486195 5.2:+67289713 None:intergenic
CTATGATTCTTCTTCAACCA+TGG 0.496021 5.2:+67289340 None:intergenic
GAAACTTTCTCTGTTGATTG+CGG 0.499376 5.2:+67289737 None:intergenic
GAGATTTGGGAGTGTAGACT+TGG 0.503080 5.2:+67289387 None:intergenic
CATACTCAGTGATTCCGATT+GGG 0.513340 5.2:-67289065 MS.gene89208:CDS
AAAAGGTGCATGGACATATG+AGG 0.529512 5.2:-67289979 MS.gene89208:CDS
CCATACTCAGTGATTCCGAT+TGG 0.544130 5.2:-67289066 MS.gene89208:CDS
AACTTTCTCTGTTGATTGCG+GGG 0.546763 5.2:+67289739 None:intergenic
GTGCATATGGAGAAGAAGAA+AGG 0.547938 5.2:-67290008 None:intergenic
AAAGGAATTGAAATCCCAAT+CGG 0.557492 5.2:+67289051 None:intergenic
GTGGGAGAGTTTGTTGAACA+TGG 0.564424 5.2:-67289191 MS.gene89208:CDS
TTGGGATTTCAATTCCTTTG+GGG 0.564675 5.2:-67289047 MS.gene89208:CDS
TGCATTCACAAGTATGGTGA+AGG 0.576048 5.2:-67289936 MS.gene89208:CDS
CCCACCATGTCGTAGATGAT+GGG 0.576749 5.2:+67289209 None:intergenic
CTTCTTCAAGTCATTCACCA+TGG 0.595797 5.2:-67289357 MS.gene89208:CDS
CAATCGGAATCACTGAGTAT+GGG 0.599036 5.2:+67289067 None:intergenic
AAGGTTTGAGAAAAGGTGCA+TGG 0.600200 5.2:-67289989 MS.gene89208:CDS
TGAGGAAGATAATCTACTCA+AGG 0.602062 5.2:-67289961 MS.gene89208:CDS
AAGACTACACTCCCAAATGT+TGG 0.603113 5.2:-67289259 MS.gene89208:CDS
ACATCATTAGCTGTCCTACC+CGG 0.608474 5.2:+67289541 None:intergenic
GTCGGAAAAGTTGTAGATTG+CGG 0.613773 5.2:-67289779 MS.gene89208:CDS
TTGCTGCAAGGCTTCCGGGT+AGG 0.615403 5.2:-67289555 MS.gene89208:intron
ATACAGGTTTGAATAGGTGT+CGG 0.617013 5.2:-67289797 MS.gene89208:intron
ACAACACTAGTAGCTTCAAG+TGG 0.627477 5.2:-67289310 MS.gene89208:CDS
TAAGGTTACACAAACTTCTG+GGG 0.633315 5.2:-67289689 MS.gene89208:CDS
ACCCATCATCTACGACATGG+TGG 0.641622 5.2:-67289210 MS.gene89208:CDS
GGTGATGCACAAACATGTGT+TGG 0.643933 5.2:-67289238 MS.gene89208:CDS
CCCATCATCTACGACATGGT+GGG 0.645185 5.2:-67289209 MS.gene89208:CDS
CAACTAATTAAAGACCCCAA+AGG 0.667420 5.2:+67289033 None:intergenic
GGAAAAGTTGTAGATTGCGG+TGG 0.681672 5.2:-67289776 MS.gene89208:CDS
ATGACCCATCATCTACGACA+TGG 0.683452 5.2:-67289213 MS.gene89208:CDS
CAACAGAGAAAGTTTCGCCG+AGG 0.708057 5.2:-67289730 MS.gene89208:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATAATATATTTAAGCA+TGG + chr5.2:67289192-67289211 None:intergenic 10.0%
!!! AAAATTTGTTACATATATAC+AGG - chr5.2:67289225-67289244 MS.gene89208:CDS 15.0%
!! ATACATATATTATACTCTCT+AGG + chr5.2:67289438-67289457 None:intergenic 20.0%
!! ATGAAATTGATATGATTCTA+AGG - chr5.2:67289331-67289350 MS.gene89208:CDS 20.0%
!!! CTATCAAGTTAATTTTGTTT+TGG - chr5.2:67289382-67289401 MS.gene89208:CDS 20.0%
! AAGAAGAATCAATGAGATTT+GGG + chr5.2:67289667-67289686 None:intergenic 25.0%
! AATCATATCAATTTCATCCT+CGG + chr5.2:67289328-67289347 None:intergenic 25.0%
! ACATATATACAGGTTTGAAT+AGG - chr5.2:67289235-67289254 MS.gene89208:CDS 25.0%
! CTAATGATGTGAAGAATTAT+TGG - chr5.2:67289510-67289529 MS.gene89208:CDS 25.0%
! CTTGCTCTTTATTACAAAAT+GGG - chr5.2:67289900-67289919 MS.gene89208:intron 25.0%
! TCTTGCTCTTTATTACAAAA+TGG - chr5.2:67289899-67289918 MS.gene89208:intron 25.0%
! TGTATCTATGTATGTATAGA+TGG - chr5.2:67289453-67289472 MS.gene89208:CDS 25.0%
!! CTATCAAGTTAAACTTCTTT+TGG - chr5.2:67289409-67289428 MS.gene89208:CDS 25.0%
!! TCTTCATTTTCTTCTTTTCT+TGG + chr5.2:67289563-67289582 None:intergenic 25.0%
!!! CAAAAGAAGTTTAACTTGAT+AGG + chr5.2:67289411-67289430 None:intergenic 25.0%
!!! CACTTTAGAATTTTCATATG+TGG - chr5.2:67289928-67289947 MS.gene89208:CDS 25.0%
!!! GTGGAGGAATTTTTTAATAA+TGG - chr5.2:67289947-67289966 MS.gene89208:CDS 25.0%
!!! TTTAGAATTTTCATATGTGG+AGG - chr5.2:67289931-67289950 MS.gene89208:CDS 25.0%
AAAGGAATTGAAATCCCAAT+CGG + chr5.2:67289990-67290009 None:intergenic 30.0%
AAGAAGAAAGGTTTGAGAAA+AGG - chr5.2:67289042-67289061 MS.gene89208:CDS 30.0%
ATTGGGATTTCAATTCCTTT+GGG - chr5.2:67289990-67290009 MS.gene89208:CDS 30.0%
GAAAGAAGCAATGAGAAAAT+TGG - chr5.2:67289875-67289894 MS.gene89208:intron 30.0%
GAAGAAGAATCAATGAGATT+TGG + chr5.2:67289668-67289687 None:intergenic 30.0%
ACAAGTATGGTGAAGGAAAA+TGG - chr5.2:67289109-67289128 MS.gene89208:CDS 35.0%
ATACACATACCTGTTCGTTT+AGG + chr5.2:67289144-67289163 None:intergenic 35.0%
ATACAGGTTTGAATAGGTGT+CGG - chr5.2:67289241-67289260 MS.gene89208:CDS 35.0%
CTAAGGTTACACAAACTTCT+GGG - chr5.2:67289348-67289367 MS.gene89208:CDS 35.0%
CTATGATTCTTCTTCAACCA+TGG + chr5.2:67289701-67289720 None:intergenic 35.0%
GATTGGGATTTCAATTCCTT+TGG - chr5.2:67289989-67290008 MS.gene89208:CDS 35.0%
TAAGGTTACACAAACTTCTG+GGG - chr5.2:67289349-67289368 MS.gene89208:CDS 35.0%
TGAGGAAGATAATCTACTCA+AGG - chr5.2:67289077-67289096 MS.gene89208:CDS 35.0%
TTGGGATTTCAATTCCTTTG+GGG - chr5.2:67289991-67290010 MS.gene89208:CDS 35.0%
TTTGTGCATCACCAACATTT+GGG + chr5.2:67289793-67289812 None:intergenic 35.0%
! AAACTTTCTCTGTTGATTGC+GGG + chr5.2:67289303-67289322 None:intergenic 35.0%
! CATTTAGTTCCTAAACGAAC+AGG - chr5.2:67289132-67289151 MS.gene89208:CDS 35.0%
! GAAACTTTCTCTGTTGATTG+CGG + chr5.2:67289304-67289323 None:intergenic 35.0%
! TCTAAGGTTACACAAACTTC+TGG - chr5.2:67289347-67289366 MS.gene89208:CDS 35.0%
AAGACTACACTCCCAAATGT+TGG - chr5.2:67289779-67289798 MS.gene89208:CDS 40.0%
AAGGCTTGCATTCACAAGTA+TGG - chr5.2:67289096-67289115 MS.gene89208:CDS 40.0%
ACAACACTAGTAGCTTCAAG+TGG - chr5.2:67289728-67289747 MS.gene89208:CDS 40.0%
CAATCGGAATCACTGAGTAT+GGG + chr5.2:67289974-67289993 None:intergenic 40.0%
CATACTCAGTGATTCCGATT+GGG - chr5.2:67289973-67289992 MS.gene89208:CDS 40.0%
CTTCTTCAAGTCATTCACCA+TGG - chr5.2:67289681-67289700 MS.gene89208:intron 40.0%
CTTGAAGCTACTAGTGTTGT+TGG + chr5.2:67289728-67289747 None:intergenic 40.0%
GTAGACTTGGAAAAAGTTCG+AGG + chr5.2:67289641-67289660 None:intergenic 40.0%
GTCGGAAAAGTTGTAGATTG+CGG - chr5.2:67289259-67289278 MS.gene89208:CDS 40.0%
GTTTGTGCATCACCAACATT+TGG + chr5.2:67289794-67289813 None:intergenic 40.0%
TGCATTCACAAGTATGGTGA+AGG - chr5.2:67289102-67289121 MS.gene89208:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG - chr5.2:67289059-67289078 MS.gene89208:CDS 40.0%
! AACTTTCTCTGTTGATTGCG+GGG + chr5.2:67289302-67289321 None:intergenic 40.0%
! AAGGTTTGAGAAAAGGTGCA+TGG - chr5.2:67289049-67289068 MS.gene89208:CDS 40.0%
ACATCATTAGCTGTCCTACC+CGG + chr5.2:67289500-67289519 None:intergenic 45.0%
ATGACCCATCATCTACGACA+TGG - chr5.2:67289825-67289844 MS.gene89208:intron 45.0%
ATTGATTGCTGCAAGGCTTC+CGG - chr5.2:67289478-67289497 MS.gene89208:CDS 45.0%
CCAATCGGAATCACTGAGTA+TGG + chr5.2:67289975-67289994 None:intergenic 45.0%
CCATACTCAGTGATTCCGAT+TGG - chr5.2:67289972-67289991 MS.gene89208:CDS 45.0%
GGAAAAGTTGTAGATTGCGG+TGG - chr5.2:67289262-67289281 MS.gene89208:CDS 45.0%
GGTGATGCACAAACATGTGT+TGG - chr5.2:67289800-67289819 MS.gene89208:intron 45.0%
TTGGAAAAAGTTCGAGGTCG+AGG + chr5.2:67289635-67289654 None:intergenic 45.0%
! GAGATTTGGGAGTGTAGACT+TGG + chr5.2:67289654-67289673 None:intergenic 45.0%
! GATGGTCATTGATTGCTGCA+AGG - chr5.2:67289471-67289490 MS.gene89208:CDS 45.0%
!! GTAGTCTTGTCACACTCTCT+TGG + chr5.2:67289767-67289786 None:intergenic 45.0%
!! GTGGGAGAGTTTGTTGAACA+TGG - chr5.2:67289847-67289866 MS.gene89208:intron 45.0%
ACCCATCATCTACGACATGG+TGG - chr5.2:67289828-67289847 MS.gene89208:intron 50.0%
CAACAGAGAAAGTTTCGCCG+AGG - chr5.2:67289308-67289327 MS.gene89208:CDS 50.0%
CCCACCATGTCGTAGATGAT+GGG + chr5.2:67289832-67289851 None:intergenic 50.0%
CCCATCATCTACGACATGGT+GGG - chr5.2:67289829-67289848 MS.gene89208:intron 50.0%
TCCCACCATGTCGTAGATGA+TGG + chr5.2:67289833-67289852 None:intergenic 50.0%
TTGATTGCTGCAAGGCTTCC+GGG - chr5.2:67289479-67289498 MS.gene89208:CDS 50.0%
TTGCTGCAAGGCTTCCGGGT+AGG - chr5.2:67289483-67289502 MS.gene89208:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 67289036 67290024 67289036 ID=MS.gene89208
chr5.2 mRNA 67289036 67290024 67289036 ID=MS.gene89208.t1;Parent=MS.gene89208
chr5.2 exon 67289907 67290024 67289907 ID=MS.gene89208.t1.exon1;Parent=MS.gene89208.t1
chr5.2 CDS 67289907 67290024 67289907 ID=cds.MS.gene89208.t1;Parent=MS.gene89208.t1
chr5.2 exon 67289684 67289813 67289684 ID=MS.gene89208.t1.exon2;Parent=MS.gene89208.t1
chr5.2 CDS 67289684 67289813 67289684 ID=cds.MS.gene89208.t1;Parent=MS.gene89208.t1
chr5.2 exon 67289036 67289567 67289036 ID=MS.gene89208.t1.exon3;Parent=MS.gene89208.t1
chr5.2 CDS 67289036 67289567 67289036 ID=cds.MS.gene89208.t1;Parent=MS.gene89208.t1
Gene Sequence

>MS.gene89208

ATGGAGAAGAAGAAAGGTTTGAGAAAAGGTGCATGGACATATGAGGAAGATAATCTACTCAAGGCTTGCATTCACAAGTATGGTGAAGGAAAATGGCATTTAGTTCCTAAACGAACAGGTATGTGTATTTAGCTAGAAGTAACTCATGAGAAACCATGCTTAAATATATTATATAATATATAGTTTGTCAAAATTTGTTACATATATACAGGTTTGAATAGGTGTCGGAAAAGTTGTAGATTGCGGTGGTTGAATTATTTAAACCCCGCAATCAACAGAGAAAGTTTCGCCGAGGATGAAATTGATATGATTCTAAGGTTACACAAACTTCTGGGGAACAAGTAAGCTATCAAGTTAATTTTGTTTTGGTTACCTATCAAGTTAAACTTCTTTTGGTTACCTAGAGAGTATAATATATGTATCTATGTATGTATAGATGGTCATTGATTGCTGCAAGGCTTCCGGGTAGGACAGCTAATGATGTGAAGAATTATTGGCACACAAATCTGCGCAAAAAAGTGATTCCAAGAAAAGAAGAAAATGAAGAAAAAGAGAAATCTAAAGAAAGCATGATCAAATCTCATGAAGTTATCAAGCCTCGACCTCGAACTTTTTCCAAGTCTACACTCCCAAATCTCATTGATTCTTCTTCAAGTCATTCACCATGGTTGAAGAAGAATCATAGTTTTCCAACAACACTAGTAGCTTCAAGTGGAGATGTTAATATTCCAAGAGAGTGTGACAAGACTACACTCCCAAATGTTGGTGATGCACAAACATGTGTTGGCAATGACCCATCATCTACGACATGGTGGGAGAGTTTGTTGAACATGGATGAAGAAAGAAGCAATGAGAAAATTGGTTCTTGCTCTTTATTACAAAATGGGAATTTCACTTTAGAATTTTCATATGTGGAGGAATTTTTTAATAATGGTCCCATACTCAGTGATTCCGATTGGGATTTCAATTCCTTTGGGGTCTTTAATTAG
Protein sequence

>MS.gene89208.t1

MEKKKGLRKGAWTYEEDNLLKACIHKYGEGKWHLVPKRTGLNRCRKSCRLRWLNYLNPAINRESFAEDEIDMILRLHKLLGNKLPGRTANDVKNYWHTNLRKKVIPRKEENEEKEKSKESMIKSHEVIKPRPRTFSKSTLPNLIDSSSSHSPWLKKNHSFPTTLVASSGDVNIPRECDKTTLPNVGDAQTCVGNDPSSTTWWESLLNMDEERSNEKIGSCSLLQNGNFTLEFSYVEEFFNNGPILSDSDWDFNSFGVFN