AlfalfaGEDB | MS.gene29449

M. sativa cultivar XinJiangDaYe / MS.gene29449

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29449.t1	XP_003616333.1	86.9	267	25	3	1	259	1	265	1.70E-128	468.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29449.t1	Q9FNV9	50.0	220	88	6	2	209	3	212	3.1e-51	203.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29449.t1	G7K1U3	86.9	267	25	3	1	259	1	265	1.2e-128	468.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene29449.t1	TF	MYB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050020	MS.gene29449	0.800256	1.57E-48	-1.69E-46
MS.gene050584	MS.gene29449	0.847111	1.42E-59	-1.69E-46
MS.gene050585	MS.gene29449	0.851732	7.33E-61	-1.69E-46
MS.gene050587	MS.gene29449	0.806529	7.87E-50	-1.69E-46
MS.gene050807	MS.gene29449	0.803302	3.72E-49	-1.69E-46
MS.gene051789	MS.gene29449	0.835201	1.93E-56	-1.69E-46
MS.gene052142	MS.gene29449	0.813832	2.10E-51	-1.69E-46
MS.gene053074	MS.gene29449	0.844529	7.15E-59	-1.69E-46
MS.gene053383	MS.gene29449	0.817748	2.81E-52	-1.69E-46
MS.gene05456	MS.gene29449	0.829523	4.91E-55	-1.69E-46
MS.gene054596	MS.gene29449	0.820016	8.57E-53	-1.69E-46
MS.gene055359	MS.gene29449	0.814656	1.38E-51	-1.69E-46
MS.gene059006	MS.gene29449	0.854879	9.17E-62	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene26076	MS.gene29449	PPI
MS.gene89207	MS.gene29449	PPI
MS.gene000721	MS.gene29449	PPI
MS.gene017438	MS.gene29449	PPI
MS.gene89211	MS.gene29449	PPI
MS.gene26075	MS.gene29449	PPI
MS.gene89208	MS.gene29449	PPI
MS.gene29449	MS.gene017439	PPI
MS.gene29450	MS.gene29449	PPI
MS.gene017439	MS.gene29449	PPI
MS.gene29449	MS.gene26076	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29449.t1	MTR_5g078800	87.640	267	23	3	1	259	1	265	4.09e-158	440
MS.gene29449.t1	MTR_5g078860	73.052	308	32	4	1	259	1	306	1.36e-145	410
MS.gene29449.t1	MTR_5g079220	66.275	255	70	7	3	251	17	261	7.46e-104	303
MS.gene29449.t1	MTR_5g079290	60.153	261	82	4	1	253	11	257	1.84e-100	294
MS.gene29449.t1	MTR_7g017260	60.000	265	85	10	1	252	19	275	6.77e-95	280
MS.gene29449.t1	MTR_5g079120	59.375	256	87	6	1	253	55	296	4.37e-94	279
MS.gene29449.t1	MTR_0001s0360	57.854	261	84	7	1	253	1	243	6.50e-93	274
MS.gene29449.t1	MTR_5g078950	55.000	260	90	5	1	239	1	254	2.27e-90	268
MS.gene29449.t1	MTR_8g060940	60.630	254	78	6	1	253	1	233	3.09e-88	262
MS.gene29449.t1	MTR_5g078910	52.613	287	82	7	1	237	1	283	1.35e-81	247
MS.gene29449.t1	MTR_5g078930	56.118	237	69	6	1	228	3	213	1.52e-78	236
MS.gene29449.t1	MTR_0193s0090	57.576	198	71	4	1	197	1	186	2.64e-67	207
MS.gene29449.t1	MTR_0247s0040	74.324	148	35	1	1	148	1	145	3.45e-66	204
MS.gene29449.t1	MTR_0197s0010	47.179	195	88	3	11	197	5	192	6.00e-55	177
MS.gene29449.t1	MTR_4g125520	54.422	147	64	1	6	152	11	154	2.04e-48	162
MS.gene29449.t1	MTR_3g083540	63.551	107	39	0	6	112	40	146	6.17e-45	153
MS.gene29449.t1	MTR_7g115650	64.151	106	38	0	6	111	11	116	9.40e-45	150
MS.gene29449.t1	MTR_0023s0210	79.518	83	17	0	1	83	1	83	3.04e-44	144
MS.gene29449.t1	MTR_0251s0050	57.600	125	53	0	2	126	8	132	4.05e-44	150
MS.gene29449.t1	MTR_0008s0470	49.007	151	70	1	2	145	8	158	6.13e-44	150
MS.gene29449.t1	MTR_0008s0390	55.645	124	55	0	2	125	8	131	4.19e-43	147
MS.gene29449.t1	MTR_8g020490	64.762	105	37	0	7	111	8	112	9.24e-43	146
MS.gene29449.t1	MTR_7g096930	52.713	129	61	0	6	134	11	139	1.46e-42	146
MS.gene29449.t1	MTR_1g076150	53.543	127	56	1	6	132	11	134	6.22e-42	144
MS.gene29449.t1	MTR_1g043050	56.757	111	48	0	5	115	10	120	6.86e-42	144
MS.gene29449.t1	MTR_1g043080	56.481	108	47	0	5	112	10	117	8.36e-42	144
MS.gene29449.t1	MTR_8g027345	61.321	106	41	0	6	111	11	116	9.85e-42	145
MS.gene29449.t1	MTR_7g117730	60.377	106	42	0	6	111	11	116	1.02e-41	144
MS.gene29449.t1	MTR_1g100653	60.377	106	42	0	6	111	11	116	2.16e-41	144
MS.gene29449.t1	MTR_2g089450	50.360	139	67	2	6	144	11	147	2.89e-41	142
MS.gene29449.t1	MTR_5g079670	60.377	106	42	0	7	112	11	116	3.99e-41	140
MS.gene29449.t1	MTR_4g100720	60.526	114	43	1	7	118	13	126	4.33e-41	139
MS.gene29449.t1	MTR_4g091490	57.658	111	47	0	2	112	8	118	6.02e-41	144
MS.gene29449.t1	MTR_5g029840	61.682	107	41	0	6	112	11	117	9.09e-41	143
MS.gene29449.t1	MTR_2g011660	57.658	111	47	0	2	112	8	118	9.76e-41	143
MS.gene29449.t1	MTR_3g077110	39.286	224	114	6	7	212	12	231	1.52e-40	143
MS.gene29449.t1	MTR_4g073420	59.615	104	42	0	9	112	14	117	3.57e-40	140
MS.gene29449.t1	MTR_3g074520	58.879	107	44	0	6	112	11	117	1.57e-39	140
MS.gene29449.t1	MTR_2g089620	58.879	107	44	0	6	112	11	117	1.70e-39	140
MS.gene29449.t1	MTR_3g039990	51.163	129	63	0	6	134	12	140	3.54e-39	138
MS.gene29449.t1	MTR_7g010210	57.547	106	45	0	6	111	11	116	9.93e-39	137
MS.gene29449.t1	MTR_3g097450	48.936	141	69	1	9	149	14	151	1.23e-38	137
MS.gene29449.t1	MTR_7g010210	57.547	106	45	0	6	111	11	116	1.28e-38	136
MS.gene29449.t1	MTR_7g110830	39.216	204	99	3	7	185	12	215	1.59e-38	138
MS.gene29449.t1	MTR_4g082230	59.091	110	44	1	2	111	8	116	3.00e-38	138
MS.gene29449.t1	MTR_4g478180	57.009	107	46	0	6	112	12	118	3.13e-38	137
MS.gene29449.t1	MTR_4g485530	59.434	106	43	0	9	114	14	119	3.46e-38	132
MS.gene29449.t1	MTR_3g461490	59.048	105	43	0	7	111	12	116	4.75e-38	136
MS.gene29449.t1	MTR_4g082290	58.491	106	44	0	6	111	11	116	5.96e-38	137
MS.gene29449.t1	MTR_5g007370	55.140	107	48	0	6	112	11	117	6.83e-38	135
MS.gene29449.t1	MTR_8g017440	58.095	105	44	0	7	111	12	116	7.73e-38	135
MS.gene29449.t1	MTR_4g105130	48.276	145	58	2	7	134	12	156	8.43e-38	136
MS.gene29449.t1	MTR_8g017540	55.556	108	48	0	5	112	56	163	1.09e-37	136
MS.gene29449.t1	MTR_6g009430	57.547	106	45	0	7	112	12	117	1.10e-37	135
MS.gene29449.t1	MTR_2g034790	55.660	106	47	0	6	111	11	116	1.41e-37	135
MS.gene29449.t1	MTR_1g112760	46.795	156	65	4	7	148	13	164	1.47e-37	132
MS.gene29449.t1	MTR_2g089420	53.271	107	50	0	6	112	10	116	1.54e-37	137
MS.gene29449.t1	MTR_1g085640	58.095	105	44	0	7	111	12	116	2.20e-37	135
MS.gene29449.t1	MTR_7g011170	56.075	107	47	0	6	112	11	117	6.20e-37	132
MS.gene29449.t1	MTR_0140s0030	52.174	115	55	0	6	120	12	126	9.82e-37	132
MS.gene29449.t1	MTR_0489s0020	52.174	115	55	0	6	120	12	126	9.82e-37	132
MS.gene29449.t1	MTR_4g121460	54.717	106	48	0	6	111	11	116	1.11e-36	132
MS.gene29449.t1	MTR_0008s0280	48.148	135	67	2	6	137	11	145	1.23e-36	129
MS.gene29449.t1	MTR_1g100667	52.846	123	57	1	1	122	6	128	1.37e-36	130
MS.gene29449.t1	MTR_7g087130	55.660	106	47	0	6	111	11	116	1.54e-36	132
MS.gene29449.t1	MTR_6g012690	56.604	106	46	0	6	111	11	116	1.86e-36	132
MS.gene29449.t1	MTR_1g085040	57.143	105	45	0	7	111	12	116	2.30e-36	132
MS.gene29449.t1	MTR_8g095390	55.340	103	46	0	9	111	14	116	3.56e-36	130
MS.gene29449.t1	MTR_6g055910	55.046	109	49	0	8	116	15	123	7.43e-36	129
MS.gene29449.t1	MTR_6g012180	59.000	100	41	0	6	105	11	110	8.10e-36	130
MS.gene29449.t1	MTR_8g017500	54.206	107	49	0	5	111	10	116	1.19e-35	130
MS.gene29449.t1	MTR_5g014990	50.847	118	57	1	7	123	12	129	1.67e-35	129
MS.gene29449.t1	MTR_2g099740	54.630	108	49	0	5	112	10	117	1.73e-35	130
MS.gene29449.t1	MTR_0063s0090	53.398	103	48	0	6	108	11	113	2.29e-35	126
MS.gene29449.t1	MTR_1g017140	49.573	117	58	1	7	122	12	128	2.59e-35	129
MS.gene29449.t1	MTR_7g076740	46.043	139	72	2	5	140	10	148	3.14e-35	128
MS.gene29449.t1	MTR_5g042030	51.786	112	54	0	1	112	1	112	4.08e-35	127
MS.gene29449.t1	MTR_8g031360	54.630	108	48	1	6	112	12	119	6.42e-35	127
MS.gene29449.t1	MTR_1g017000	52.336	107	50	1	7	112	12	118	6.88e-35	125
MS.gene29449.t1	MTR_8g017390	56.075	107	46	1	7	112	12	118	7.02e-35	130
MS.gene29449.t1	MTR_3g103570	46.154	130	68	2	7	135	12	140	7.02e-35	128
MS.gene29449.t1	MTR_2g097910	53.333	105	49	0	7	111	20	124	1.61e-34	126
MS.gene29449.t1	MTR_2g064160	50.926	108	53	0	7	114	11	118	2.62e-34	125
MS.gene29449.t1	MTR_4g065017	54.286	105	48	0	7	111	17	121	3.50e-34	126
MS.gene29449.t1	MTR_8g098860	52.381	105	50	0	7	111	12	116	5.01e-34	125
MS.gene29449.t1	MTR_6g090405	54.206	107	48	1	7	112	12	118	5.11e-34	124
MS.gene29449.t1	MTR_7g111290	60.204	98	39	0	7	104	12	109	5.73e-34	126
MS.gene29449.t1	MTR_4g102380	55.140	107	48	0	6	112	11	117	6.70e-34	124
MS.gene29449.t1	MTR_1g110460	54.286	105	48	0	7	111	26	130	7.91e-34	124
MS.gene29449.t1	MTR_8g017340	54.206	107	48	1	7	112	12	118	1.04e-33	127
MS.gene29449.t1	MTR_7g102110	55.140	107	47	1	7	112	12	118	1.99e-33	122
MS.gene29449.t1	MTR_4g057635	55.140	107	47	1	7	112	12	118	2.36e-33	123
MS.gene29449.t1	MTR_3g052430	50.962	104	51	0	7	110	41	144	3.50e-33	126
MS.gene29449.t1	MTR_3g052450	50.962	104	51	0	7	110	40	143	4.65e-33	126
MS.gene29449.t1	MTR_3g028740	52.381	105	50	0	7	111	22	126	4.99e-33	123
MS.gene29449.t1	MTR_2g096380	51.376	109	53	0	7	115	6	114	6.50e-33	120
MS.gene29449.t1	MTR_8g017350	53.271	107	49	1	7	112	12	118	6.66e-33	126
MS.gene29449.t1	MTR_7g035075	49.573	117	57	1	7	123	14	128	1.35e-32	118
MS.gene29449.t1	MTR_1g073170	50.407	123	58	1	8	130	21	140	2.14e-32	119
MS.gene29449.t1	MTR_3g011610	50.476	105	52	0	7	111	37	141	2.57e-32	124
MS.gene29449.t1	MTR_5g078140	54.717	106	48	0	6	111	11	116	4.74e-32	120
MS.gene29449.t1	MTR_2g095520	57.000	100	42	1	7	105	12	111	4.94e-32	120
MS.gene29449.t1	MTR_3g065440	54.717	106	48	0	6	111	11	116	6.04e-32	119
MS.gene29449.t1	MTR_4g097570	55.556	99	43	1	7	104	12	110	6.36e-32	119
MS.gene29449.t1	MTR_2g067420	52.525	99	47	0	7	105	14	112	6.65e-32	120
MS.gene29449.t1	MTR_1g045610	49.593	123	59	1	8	130	22	141	7.08e-32	118
MS.gene29449.t1	MTR_1g086510	51.818	110	53	0	2	111	16	125	1.21e-31	117
MS.gene29449.t1	MTR_7g109320	35.681	213	103	4	6	185	11	222	1.29e-31	119
MS.gene29449.t1	MTR_5g010020	52.525	99	47	0	7	105	12	110	1.59e-31	119
MS.gene29449.t1	MTR_4g063100	49.074	108	55	0	8	115	8	115	3.08e-31	116
MS.gene29449.t1	MTR_6g006030	51.429	105	51	0	7	111	14	118	6.64e-31	114
MS.gene29449.t1	MTR_8g042410	49.541	109	53	1	4	110	32	140	8.88e-31	120
MS.gene29449.t1	MTR_4g128670	54.000	100	45	1	7	105	12	111	1.49e-30	117
MS.gene29449.t1	MTR_2g088170	50.476	105	52	0	6	110	28	132	1.68e-30	118
MS.gene29449.t1	MTR_1g062940	48.649	111	57	0	7	117	6	116	2.07e-30	113
MS.gene29449.t1	MTR_4g097570	55.000	100	43	2	7	104	12	111	2.42e-30	115
MS.gene29449.t1	MTR_1g086530	48.182	110	57	0	2	111	28	137	1.04e-29	113
MS.gene29449.t1	MTR_1g021230	48.077	104	54	0	7	110	57	160	6.20e-29	114
MS.gene29449.t1	MTR_1g083630	47.222	108	57	0	4	111	9	116	3.01e-28	113
MS.gene29449.t1	MTR_5g079140	42.857	154	53	5	84	228	7	134	1.28e-27	103
MS.gene29449.t1	MTR_0023s0260	41.279	172	84	8	91	251	10	175	3.59e-26	100
MS.gene29449.t1	MTR_3g045430	42.727	110	63	0	2	111	8	117	4.51e-26	103
MS.gene29449.t1	MTR_5g088080	46.154	104	55	1	7	109	12	115	5.87e-26	102
MS.gene29449.t1	MTR_5g088150	46.154	104	55	1	7	109	12	115	5.87e-26	102
MS.gene29449.t1	MTR_5g488210	46.154	104	55	1	7	109	12	115	5.87e-26	102
MS.gene29449.t1	MTR_5g488170	46.154	104	55	1	7	109	12	115	6.11e-26	102
MS.gene29449.t1	MTR_2g033170	50.485	103	51	0	7	109	24	126	7.44e-26	103
MS.gene29449.t1	MTR_5g088640	46.154	104	55	1	7	109	12	115	7.92e-26	102
MS.gene29449.t1	MTR_5g062790	46.154	104	55	1	7	109	9	112	1.24e-25	102
MS.gene29449.t1	MTR_6g055910	57.143	77	33	0	40	116	18	94	2.07e-25	101
MS.gene29449.t1	MTR_5g007300	56.410	78	34	0	6	83	63	140	3.36e-25	97.4
MS.gene29449.t1	MTR_4g019370	41.379	116	67	1	9	124	38	152	4.22e-25	102
MS.gene29449.t1	MTR_4g123040	48.148	108	56	0	2	109	19	126	1.53e-24	100
MS.gene29449.t1	MTR_4g094982	44.118	102	56	1	9	110	5	105	2.77e-24	98.6
MS.gene29449.t1	MTR_5g088610	45.192	104	56	1	7	109	9	112	8.10e-24	98.6
MS.gene29449.t1	MTR_7g037260	43.119	109	61	1	7	115	143	250	1.94e-23	97.8
MS.gene29449.t1	MTR_7g111290	63.636	66	24	0	39	104	2	67	2.54e-23	97.1
MS.gene29449.t1	MTR_2g096380	57.143	77	33	0	39	115	19	95	3.56e-23	94.4
MS.gene29449.t1	MTR_5g049190	42.308	104	59	1	7	110	17	119	6.37e-23	94.4
MS.gene29449.t1	MTR_5g016510	42.157	102	58	1	9	110	5	105	7.46e-23	95.5
MS.gene29449.t1	MTR_8g006470	44.231	104	57	1	7	109	10	113	1.04e-22	94.7
MS.gene29449.t1	MTR_4g029540	37.857	140	78	3	2	132	4	143	2.00e-22	94.0
MS.gene29449.t1	MTR_3g101290	42.718	103	58	1	9	111	37	138	2.30e-22	92.4
MS.gene29449.t1	MTR_1g026870	40.777	103	60	1	9	111	85	186	2.47e-22	96.3
MS.gene29449.t1	MTR_1g026870	29.851	134	86	3	4	136	28	154	1.05e-11	65.1
MS.gene29449.t1	MTR_4g063100	54.545	77	35	0	39	115	10	86	3.02e-22	92.0
MS.gene29449.t1	MTR_7g061330	43.689	103	57	1	9	111	113	214	6.14e-22	95.1
MS.gene29449.t1	MTR_7g461410	43.689	103	57	1	9	111	113	214	6.14e-22	95.1
MS.gene29449.t1	MTR_4g082040	42.157	102	58	1	9	110	105	205	6.33e-22	94.4
MS.gene29449.t1	MTR_4g128190	38.406	138	65	4	5	135	9	133	6.50e-22	91.3
MS.gene29449.t1	MTR_3g089045	35.915	142	85	2	2	143	9	144	6.88e-22	92.4
MS.gene29449.t1	MTR_7g061330	43.689	103	57	1	9	111	77	178	9.07e-22	94.4
MS.gene29449.t1	MTR_3g463400	34.965	143	86	2	9	151	133	268	1.29e-21	93.6
MS.gene29449.t1	MTR_5g041570	41.176	102	59	1	9	110	134	234	1.45e-21	93.2
MS.gene29449.t1	MTR_4g105660	42.857	105	57	2	7	110	178	280	1.77e-21	93.2
MS.gene29449.t1	MTR_3g110028	39.806	103	61	1	9	111	85	186	2.44e-21	93.6
MS.gene29449.t1	MTR_3g110028	30.435	138	88	3	4	140	28	158	6.54e-12	65.5
MS.gene29449.t1	MTR_1g057980	42.056	107	61	1	2	108	73	178	2.96e-21	90.9
MS.gene29449.t1	MTR_7g451170	31.902	163	106	3	9	168	191	351	4.32e-21	91.7
MS.gene29449.t1	MTR_3g077650	41.667	108	60	2	9	115	181	286	5.15e-21	92.0
MS.gene29449.t1	MTR_5g070020	42.157	102	58	1	9	110	122	222	7.64e-21	90.5
MS.gene29449.t1	MTR_6g074860	40.404	99	58	1	9	107	4	101	3.76e-20	86.7
MS.gene29449.t1	MTR_7g086960	42.157	102	58	1	9	110	89	189	4.02e-20	88.6
MS.gene29449.t1	MTR_6g027340	42.268	97	55	1	9	105	16	111	4.81e-20	85.5
MS.gene29449.t1	MTR_6g015455	41.509	106	53	2	9	110	5	105	5.73e-20	89.7
MS.gene29449.t1	MTR_4g088015	39.806	103	61	1	7	109	219	320	8.20e-20	88.6
MS.gene29449.t1	MTR_7g061550	30.583	206	105	6	12	200	10	194	1.10e-19	87.4
MS.gene29449.t1	MTR_6g027360	41.414	99	57	1	7	105	76	173	1.46e-19	86.3
MS.gene29449.t1	MTR_7g035350	43.000	100	56	1	9	108	225	323	2.47e-19	87.0
MS.gene29449.t1	MTR_1g085880	42.857	105	58	2	7	109	11	115	3.87e-18	80.1
MS.gene29449.t1	MTR_6g027370	40.196	102	60	1	9	110	99	199	4.95e-18	82.8
MS.gene29449.t1	MTR_7g037130	37.500	112	67	2	7	118	143	251	8.90e-18	82.0
MS.gene29449.t1	MTR_1g085770	42.857	105	58	2	7	109	11	115	9.62e-18	81.3
MS.gene29449.t1	MTR_5g082910	37.864	103	55	2	9	107	19	116	1.85e-17	80.1
MS.gene29449.t1	MTR_7g450950	32.308	130	86	2	1	130	149	276	2.66e-17	80.5
MS.gene29449.t1	MTR_5g010650	38.542	96	58	1	9	104	110	204	7.87e-16	77.0
MS.gene29449.t1	MTR_2g088730	66.667	39	13	0	65	103	34	72	4.36e-14	66.2
MS.gene29449.t1	MTR_8g468380	30.657	137	94	1	11	147	24	159	1.45e-13	70.1
MS.gene29449.t1	MTR_5g038910	34.653	101	65	1	11	111	28	127	1.69e-13	70.1
MS.gene29449.t1	MTR_5g038910	34.653	101	65	1	11	111	28	127	1.96e-13	69.7
MS.gene29449.t1	MTR_6g055910	53.846	52	24	0	65	116	2	53	3.85e-13	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29449.t1	AT1G66370	50.000	220	88	6	2	209	3	212	1.47e-60	192
MS.gene29449.t1	AT1G56650	61.644	146	55	1	4	148	5	150	7.17e-53	172
MS.gene29449.t1	AT1G66380	77.273	110	25	0	4	113	5	114	8.29e-52	166
MS.gene29449.t1	AT1G66390	62.585	147	53	1	4	148	5	151	2.12e-51	168
MS.gene29449.t1	AT3G13540	63.551	107	39	0	6	112	22	128	7.61e-46	154
MS.gene29449.t1	AT5G35550	58.261	115	47	1	7	121	14	127	5.09e-42	144
MS.gene29449.t1	AT2G16720	60.377	106	42	0	9	114	14	119	5.18e-42	145
MS.gene29449.t1	AT5G14750	49.020	153	67	3	8	160	17	158	3.70e-41	140
MS.gene29449.t1	AT4G38620	61.538	104	40	0	9	112	14	117	4.88e-41	142
MS.gene29449.t1	AT4G09460	49.630	135	61	1	9	136	14	148	7.95e-41	140
MS.gene29449.t1	AT5G16770	59.813	107	43	0	6	112	11	117	8.94e-41	143
MS.gene29449.t1	AT5G16770	59.813	107	43	0	6	112	11	117	8.94e-41	143
MS.gene29449.t1	AT4G05100	57.658	111	47	0	2	112	8	118	9.61e-41	143
MS.gene29449.t1	AT5G16770	59.813	107	43	0	6	112	11	117	1.40e-40	143
MS.gene29449.t1	AT5G16770	59.813	107	43	0	6	112	11	117	1.40e-40	143
MS.gene29449.t1	AT1G22640	58.491	106	44	0	9	114	14	119	1.40e-40	140
MS.gene29449.t1	AT4G17785	58.559	111	46	0	2	112	8	118	2.54e-40	142
MS.gene29449.t1	AT4G17785	58.559	111	46	0	2	112	8	118	3.13e-40	142
MS.gene29449.t1	AT3G02940	59.813	107	43	0	6	112	11	117	4.77e-40	140
MS.gene29449.t1	AT5G40330	58.654	104	43	0	8	111	13	116	5.19e-40	138
MS.gene29449.t1	AT3G23250	47.917	144	74	1	6	149	11	153	5.26e-40	140
MS.gene29449.t1	AT4G21440	58.879	107	44	0	6	112	11	117	5.67e-40	141
MS.gene29449.t1	AT3G02940	59.813	107	43	0	6	112	11	117	6.00e-40	140
MS.gene29449.t1	AT3G02940	59.813	107	43	0	6	112	11	117	6.00e-40	140
MS.gene29449.t1	AT4G34990	58.491	106	44	0	9	114	14	119	8.10e-40	139
MS.gene29449.t1	AT3G27920	57.143	105	45	0	8	112	15	119	9.05e-40	137
MS.gene29449.t1	AT4G28110	57.009	107	46	0	6	112	11	117	1.23e-39	139
MS.gene29449.t1	AT5G52600	54.472	123	50	1	7	129	12	128	1.70e-39	136
MS.gene29449.t1	AT5G60890	56.881	109	47	0	3	111	8	116	3.16e-39	138
MS.gene29449.t1	AT3G30210	33.333	264	146	6	6	258	26	270	4.69e-39	137
MS.gene29449.t1	AT5G65230	57.944	107	45	0	6	112	11	117	4.92e-39	138
MS.gene29449.t1	AT4G01680	60.000	105	42	0	7	111	12	116	6.58e-39	136
MS.gene29449.t1	AT1G06180	52.991	117	55	0	6	122	11	127	9.09e-39	135
MS.gene29449.t1	AT3G61250	57.009	107	46	0	6	112	11	117	9.52e-39	137
MS.gene29449.t1	AT1G57560	39.604	202	102	4	7	192	12	209	1.03e-38	137
MS.gene29449.t1	AT5G10280	57.944	107	45	0	6	112	11	117	1.41e-38	137
MS.gene29449.t1	AT5G54230	58.491	106	44	0	7	112	12	117	1.74e-38	137
MS.gene29449.t1	AT4G01680	60.000	105	42	0	7	111	12	116	2.06e-38	137
MS.gene29449.t1	AT1G18570	56.881	109	47	0	6	114	12	120	2.27e-38	137
MS.gene29449.t1	AT5G56110	60.000	105	42	0	7	111	12	116	3.02e-38	136
MS.gene29449.t1	AT5G07700	57.009	107	46	0	6	112	11	117	3.56e-38	136
MS.gene29449.t1	AT5G07700	57.009	107	46	0	6	112	11	117	3.56e-38	136
MS.gene29449.t1	AT5G07690	55.963	109	48	0	6	114	11	119	4.13e-38	136
MS.gene29449.t1	AT2G31180	57.547	106	45	0	6	111	11	116	5.72e-38	134
MS.gene29449.t1	AT1G57560	57.407	108	46	0	7	114	12	119	7.77e-38	134
MS.gene29449.t1	AT3G47600	58.491	106	44	0	6	111	11	116	9.40e-38	135
MS.gene29449.t1	AT1G74650	55.357	112	50	0	7	118	12	123	1.26e-37	135
MS.gene29449.t1	AT1G74080	52.679	112	53	0	3	114	8	119	1.48e-37	135
MS.gene29449.t1	AT5G15310	56.075	107	47	0	6	112	11	117	1.79e-37	134
MS.gene29449.t1	AT5G15310	56.075	107	47	0	6	112	11	117	2.01e-37	132
MS.gene29449.t1	AT3G48920	49.194	124	63	0	1	124	12	135	2.09e-37	132
MS.gene29449.t1	AT5G15310	56.075	107	47	0	6	112	11	117	2.22e-37	134
MS.gene29449.t1	AT1G08810	49.219	128	63	1	6	133	11	136	2.59e-37	133
MS.gene29449.t1	AT3G01140	57.009	107	46	0	6	112	11	117	3.21e-37	134
MS.gene29449.t1	AT5G62470	54.783	115	52	0	6	120	11	125	3.65e-37	134
MS.gene29449.t1	AT5G61420	55.140	107	48	0	6	112	11	117	3.69e-37	134
MS.gene29449.t1	AT3G13890	56.604	106	46	0	7	112	12	117	3.78e-37	134
MS.gene29449.t1	AT5G49330	55.660	106	47	0	6	111	11	116	4.01e-37	134
MS.gene29449.t1	AT1G35515	54.717	106	48	0	7	112	12	117	4.18e-37	130
MS.gene29449.t1	AT1G34670	57.944	107	45	0	6	112	11	117	4.65e-37	134
MS.gene29449.t1	AT1G16490	48.819	127	64	1	2	128	10	135	5.54e-37	132
MS.gene29449.t1	AT1G74430	55.046	109	49	0	6	114	11	119	6.31e-37	131
MS.gene29449.t1	AT5G26660	58.095	105	44	0	7	111	12	116	7.95e-37	133
MS.gene29449.t1	AT5G57620	46.528	144	76	1	7	149	12	155	8.97e-37	133
MS.gene29449.t1	AT3G01140	57.009	107	46	0	6	112	54	160	9.42e-37	134
MS.gene29449.t1	AT3G28910	57.547	106	45	0	6	111	11	116	9.67e-37	132
MS.gene29449.t1	AT1G09540	40.698	172	90	1	7	166	12	183	4.19e-36	132
MS.gene29449.t1	AT5G62320	41.143	175	95	3	6	172	12	186	8.37e-36	128
MS.gene29449.t1	AT5G65790	48.819	127	64	1	7	132	12	138	8.80e-36	131
MS.gene29449.t1	AT5G12870	52.294	109	52	0	3	111	14	122	9.67e-36	129
MS.gene29449.t1	AT5G62470	54.783	115	51	1	6	120	11	124	1.39e-35	130
MS.gene29449.t1	AT1G66380	72.093	86	24	0	4	89	5	90	1.62e-35	123
MS.gene29449.t1	AT4G25560	34.800	250	147	5	8	253	11	248	1.74e-35	128
MS.gene29449.t1	AT3G28470	57.576	99	42	0	7	105	12	110	3.79e-35	128
MS.gene29449.t1	AT2G47460	52.830	106	50	0	6	111	11	116	4.43e-35	129
MS.gene29449.t1	AT3G62610	54.717	106	48	0	6	111	11	116	5.24e-35	128
MS.gene29449.t1	AT4G01680	53.846	117	42	1	7	111	12	128	5.53e-35	128
MS.gene29449.t1	AT4G37780	51.351	111	53	1	6	115	11	121	1.71e-34	126
MS.gene29449.t1	AT4G22680	55.140	107	48	0	6	112	11	117	1.75e-34	125
MS.gene29449.t1	AT3G49690	54.545	110	49	1	7	115	12	121	2.72e-34	125
MS.gene29449.t1	AT5G23000	55.357	112	48	2	2	112	8	118	3.72e-34	125
MS.gene29449.t1	AT3G13890	52.174	115	46	1	7	112	12	126	4.35e-34	126
MS.gene29449.t1	AT1G18710	51.376	109	53	0	6	114	11	119	5.17e-34	124
MS.gene29449.t1	AT3G46130	51.304	115	56	0	1	115	3	117	5.45e-34	124
MS.gene29449.t1	AT1G79180	51.429	105	51	0	7	111	14	118	7.21e-34	124
MS.gene29449.t1	AT1G56160	52.336	107	51	0	7	113	14	120	8.72e-34	124
MS.gene29449.t1	AT4G13480	55.085	118	52	1	8	125	7	123	1.35e-33	122
MS.gene29449.t1	AT5G59780	53.704	108	50	0	8	115	9	116	1.74e-33	122
MS.gene29449.t1	AT2G32460	50.943	106	52	0	5	110	16	121	1.93e-33	127
MS.gene29449.t1	AT2G32460	50.943	106	52	0	5	110	4	109	2.02e-33	126
MS.gene29449.t1	AT3G24310	51.200	125	58	1	6	130	17	138	2.82e-33	122
MS.gene29449.t1	AT4G12350	55.660	106	47	0	7	112	12	117	3.04e-33	122
MS.gene29449.t1	AT3G12720	50.000	106	53	0	7	112	22	127	4.90e-33	122
MS.gene29449.t1	AT1G63910	52.381	105	50	0	7	111	12	116	6.42e-33	123
MS.gene29449.t1	AT1G25340	55.769	104	46	0	8	111	19	122	7.43e-33	121
MS.gene29449.t1	AT3G08500	53.333	105	49	0	7	111	30	134	8.27e-33	122
MS.gene29449.t1	AT5G40350	37.430	179	107	3	7	180	17	195	1.74e-32	118
MS.gene29449.t1	AT3G12820	50.000	106	53	0	7	112	14	119	2.03e-32	119
MS.gene29449.t1	AT5G52260	57.282	103	44	0	8	110	13	115	2.21e-32	119
MS.gene29449.t1	AT5G55020	52.427	103	49	0	7	109	26	128	2.76e-32	124
MS.gene29449.t1	AT2G47190	49.091	110	56	0	2	111	15	124	4.07e-32	119
MS.gene29449.t1	AT3G01530	51.429	105	51	0	7	111	25	129	4.75e-32	117
MS.gene29449.t1	AT4G26930	50.485	103	51	0	7	109	19	121	5.33e-32	121
MS.gene29449.t1	AT5G06100	48.571	105	54	0	6	110	31	135	5.63e-32	122
MS.gene29449.t1	AT2G26960	49.524	105	53	0	5	109	18	122	8.91e-32	121
MS.gene29449.t1	AT5G14340	52.830	106	50	0	6	111	23	128	1.26e-31	118
MS.gene29449.t1	AT5G06100	48.571	105	54	0	6	110	31	135	1.43e-31	122
MS.gene29449.t1	AT5G06100	48.571	105	54	0	6	110	31	135	1.43e-31	122
MS.gene29449.t1	AT5G06100	48.571	105	54	0	6	110	31	135	1.43e-31	122
MS.gene29449.t1	AT5G06100	48.571	105	54	0	6	110	31	135	1.43e-31	122
MS.gene29449.t1	AT1G48000	54.369	103	47	0	7	109	32	134	1.57e-31	117
MS.gene29449.t1	AT1G66230	53.774	106	49	0	6	111	11	116	1.71e-31	117
MS.gene29449.t1	AT2G36890	53.271	107	49	1	7	112	12	118	3.08e-31	117
MS.gene29449.t1	AT2G36890	53.271	107	49	1	7	112	53	159	3.24e-31	118
MS.gene29449.t1	AT1G68320	54.286	105	48	0	7	111	19	123	4.66e-31	117
MS.gene29449.t1	AT3G53200	50.909	110	54	0	1	110	3	112	5.07e-31	115
MS.gene29449.t1	AT3G27810	50.476	105	52	0	7	111	20	124	1.44e-30	114
MS.gene29449.t1	AT5G16600	51.887	106	51	0	6	111	11	116	4.66e-30	115
MS.gene29449.t1	AT1G66380	78.667	75	16	0	39	113	7	81	4.99e-30	108
MS.gene29449.t1	AT5G14750	59.770	87	32	1	34	120	12	95	5.21e-30	110
MS.gene29449.t1	AT3G11440	46.154	104	56	0	7	110	41	144	5.43e-30	117
MS.gene29449.t1	AT3G11440	46.154	104	56	0	7	110	41	144	1.03e-29	117
MS.gene29449.t1	AT3G11440	46.154	104	56	0	7	110	41	144	1.03e-29	117
MS.gene29449.t1	AT3G11440	46.154	104	56	0	7	110	41	144	1.03e-29	117
MS.gene29449.t1	AT1G25340	53.846	104	43	1	8	111	19	117	1.31e-29	112
MS.gene29449.t1	AT1G25340	53.846	104	43	1	8	111	19	117	2.07e-29	113
MS.gene29449.t1	AT5G35550	63.415	82	29	1	40	121	50	130	2.90e-29	111
MS.gene29449.t1	AT1G79180	38.462	143	54	2	2	111	10	151	1.54e-27	108
MS.gene29449.t1	AT5G26660	58.442	77	32	0	35	111	9	85	2.38e-26	105
MS.gene29449.t1	AT2G26950	38.406	138	81	2	1	138	12	145	1.12e-25	104
MS.gene29449.t1	AT3G06490	49.541	109	55	0	1	109	13	121	1.27e-25	103
MS.gene29449.t1	AT5G49620	49.541	109	55	0	1	109	20	128	3.15e-25	101
MS.gene29449.t1	AT3G53200	59.740	77	31	0	34	110	3	79	3.32e-25	99.4
MS.gene29449.t1	AT3G47600	63.889	72	26	0	40	111	39	110	4.45e-25	101
MS.gene29449.t1	AT1G69560	35.971	139	82	3	6	144	104	235	8.87e-25	100
MS.gene29449.t1	AT1G69560	35.971	139	82	3	6	144	120	251	1.01e-24	101
MS.gene29449.t1	AT5G59780	58.974	78	32	0	38	115	18	95	1.34e-24	98.2
MS.gene29449.t1	AT3G46130	58.974	78	32	0	38	115	18	95	3.11e-24	97.8
MS.gene29449.t1	AT3G46130	58.442	77	32	0	39	115	9	85	6.11e-24	96.7
MS.gene29449.t1	AT5G11510	43.689	103	57	1	9	111	81	182	6.82e-24	100
MS.gene29449.t1	AT5G11510	28.358	134	88	3	4	136	24	150	2.45e-11	63.9
MS.gene29449.t1	AT5G11510	43.689	103	57	1	9	111	81	182	6.82e-24	100
MS.gene29449.t1	AT5G11510	28.358	134	88	3	4	136	24	150	2.45e-11	63.9
MS.gene29449.t1	AT5G11510	43.689	103	57	1	9	111	81	182	6.82e-24	100
MS.gene29449.t1	AT5G11510	28.358	134	88	3	4	136	24	150	2.45e-11	63.9
MS.gene29449.t1	AT2G39880	47.059	102	53	1	9	110	50	150	8.59e-24	99.0
MS.gene29449.t1	AT5G11510	43.689	103	57	1	9	111	81	182	1.11e-23	100
MS.gene29449.t1	AT5G11510	28.261	138	91	3	4	140	24	154	2.08e-11	64.3
MS.gene29449.t1	AT3G55730	45.283	106	57	1	5	110	52	156	1.16e-23	99.0
MS.gene29449.t1	AT5G11510	43.689	103	57	1	9	111	81	182	1.20e-23	100
MS.gene29449.t1	AT5G11510	28.261	138	91	3	4	140	24	154	1.79e-11	64.3
MS.gene29449.t1	AT4G37260	43.137	102	57	1	9	110	13	113	5.56e-23	95.9
MS.gene29449.t1	AT3G09230	43.269	104	58	1	9	112	55	157	6.05e-23	97.1
MS.gene29449.t1	AT3G12820	54.286	70	32	0	43	112	2	71	6.99e-23	92.8
MS.gene29449.t1	AT5G02320	41.748	103	59	1	9	111	127	228	1.22e-22	97.1
MS.gene29449.t1	AT5G02320	41.748	103	59	1	9	111	127	228	1.22e-22	97.1
MS.gene29449.t1	AT4G18770	41.880	117	59	2	3	115	211	322	1.25e-22	96.3
MS.gene29449.t1	AT5G02320	41.748	103	59	1	9	111	67	168	1.69e-22	96.3
MS.gene29449.t1	AT2G23290	43.137	102	57	1	9	110	13	113	1.75e-22	94.4
MS.gene29449.t1	AT1G71030	60.294	68	27	0	45	112	4	71	1.75e-22	91.7
MS.gene29449.t1	AT2G37630	43.103	116	58	2	12	125	7	116	2.12e-22	95.1
MS.gene29449.t1	AT1G71030	60.294	68	27	0	45	112	18	85	2.30e-22	91.7
MS.gene29449.t1	AT1G26780	42.157	102	58	1	9	110	98	198	3.50e-22	93.2
MS.gene29449.t1	AT3G60460	42.593	108	61	1	3	109	7	114	4.84e-22	93.2
MS.gene29449.t1	AT1G26780	42.157	102	58	1	9	110	98	198	5.13e-22	94.0
MS.gene29449.t1	AT5G49620	43.902	123	55	1	1	109	20	142	1.01e-21	92.4
MS.gene29449.t1	AT5G67300	44.118	102	56	1	9	110	6	106	1.04e-21	92.4
MS.gene29449.t1	AT5G14750	48.148	108	45	3	53	160	1	97	1.14e-21	88.2
MS.gene29449.t1	AT5G14750	48.148	108	45	3	53	160	1	97	1.14e-21	88.2
MS.gene29449.t1	AT5G40350	34.247	146	91	3	40	180	5	150	3.74e-21	87.8
MS.gene29449.t1	AT3G50060	36.719	128	72	2	9	128	6	132	3.83e-21	90.5
MS.gene29449.t1	AT3G09370	41.176	102	59	1	9	110	135	235	4.23e-21	92.4
MS.gene29449.t1	AT3G09370	31.731	104	69	2	9	111	83	185	4.74e-11	62.8
MS.gene29449.t1	AT3G09370	41.176	102	59	1	9	110	130	230	4.64e-21	92.4
MS.gene29449.t1	AT3G09370	31.731	104	69	2	9	111	78	180	5.08e-11	62.8
MS.gene29449.t1	AT1G17950	40.196	102	60	1	9	110	5	105	6.86e-21	89.0
MS.gene29449.t1	AT3G09370	41.176	102	59	1	9	110	143	243	7.17e-21	91.7
MS.gene29449.t1	AT3G09370	31.731	104	69	2	9	111	91	193	5.24e-11	62.8
MS.gene29449.t1	AT3G27785	40.741	108	63	1	3	110	183	289	8.09e-21	91.3
MS.gene29449.t1	AT4G33450	32.886	149	83	3	1	139	1	142	8.58e-21	88.6
MS.gene29449.t1	AT1G73410	42.056	107	53	2	9	111	6	107	1.45e-20	87.8
MS.gene29449.t1	AT1G73410	42.056	107	53	2	9	111	6	107	2.94e-20	86.3
MS.gene29449.t1	AT5G17800	35.897	117	74	1	4	120	88	203	3.76e-20	88.2
MS.gene29449.t1	AT4G32730	37.864	103	63	1	9	111	87	188	6.26e-20	89.4
MS.gene29449.t1	AT1G18960	42.453	106	52	3	9	111	10	109	6.30e-20	87.4
MS.gene29449.t1	AT4G32730	37.864	103	63	1	9	111	87	188	6.93e-20	89.4
MS.gene29449.t1	AT4G32730	37.864	103	63	1	9	111	87	188	6.93e-20	89.4
MS.gene29449.t1	AT4G32730	37.864	103	63	1	9	111	87	188	6.93e-20	89.4
MS.gene29449.t1	AT4G32730	37.864	103	63	1	9	111	87	188	6.93e-20	89.4
MS.gene29449.t1	AT3G27810	51.389	72	35	0	40	111	4	75	9.59e-20	84.3
MS.gene29449.t1	AT3G23250	45.361	97	52	1	53	149	1	96	1.32e-19	85.1
MS.gene29449.t1	AT3G29020	38.532	109	64	2	4	111	60	166	1.67e-19	84.7
MS.gene29449.t1	AT3G29020	38.532	109	64	2	4	111	62	168	2.01e-19	85.9
MS.gene29449.t1	AT5G58850	37.838	111	68	1	9	119	105	214	2.94e-19	86.7
MS.gene29449.t1	AT1G22640	53.226	62	29	0	53	114	1	62	5.26e-19	82.8
MS.gene29449.t1	AT5G40360	40.777	103	60	1	7	109	156	257	6.19e-19	85.5
MS.gene29449.t1	AT5G11050	32.867	143	92	2	5	147	101	239	6.66e-19	85.9
MS.gene29449.t1	AT5G39700	38.596	114	68	2	2	115	49	160	1.90e-17	78.6
MS.gene29449.t1	AT2G25230	38.318	107	65	1	3	109	20	125	4.74e-17	78.2
MS.gene29449.t1	AT4G00540	36.697	109	65	2	6	111	100	207	6.12e-16	77.0
MS.gene29449.t1	AT4G00540	37.037	108	64	2	7	111	99	205	7.81e-16	77.0
MS.gene29449.t1	AT5G40430	36.449	107	66	2	3	109	48	152	3.92e-15	73.2
MS.gene29449.t1	AT2G02820	34.653	101	65	1	11	111	32	131	1.37e-13	69.7
MS.gene29449.t1	AT2G02820	34.653	101	65	1	11	111	32	131	1.53e-13	70.1
MS.gene29449.t1	AT2G02820	34.653	101	65	1	11	111	32	131	1.55e-13	70.1
MS.gene29449.t1	AT1G14350	33.663	101	66	1	11	111	27	126	7.75e-13	68.2
MS.gene29449.t1	AT1G14350	33.663	101	66	1	11	111	27	126	7.75e-13	68.2
MS.gene29449.t1	AT4G25560	29.167	192	120	5	66	253	3	182	5.97e-12	63.9
MS.gene29449.t1	AT1G74650	57.447	47	20	0	72	118	1	47	1.14e-11	63.5
MS.gene29449.t1	AT5G59780	59.091	44	18	0	72	115	8	51	9.42e-11	59.7

Find 54 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGTGCATCACCAATATT+TGG	0.157018	5.3:+64066247	None:intergenic
ACAAATATGGTGAAGGAAAA+TGG	0.248786	5.3:-64067310	MS.gene29449:CDS
GATTGGGATTTCAATTCCTT+TGG	0.296288	5.3:-64066049	MS.gene29449:CDS
ATGAAATTGATATGATTCTA+AGG	0.332329	5.3:-64067006	MS.gene29449:CDS
AAGGCTTGTATCAACAAATA+TGG	0.337725	5.3:-64067323	MS.gene29449:CDS
TCTAAGGCTACACAAACTTC+TGG	0.348121	5.3:-64066990	MS.gene29449:CDS
TTGATTGCTGCAAGGCTTCC+GGG	0.348445	5.3:-64066538	MS.gene29449:CDS
CCAATGATGTGAAGAATTAC+TGG	0.351522	5.3:-64066507	MS.gene29449:CDS
GAAAGAAGTAATGAGAAAAT+TGG	0.354552	5.3:-64066163	MS.gene29449:CDS
ATTGGGATTTCAATTCCTTT+GGG	0.360516	5.3:-64066048	MS.gene29449:CDS
ATTGATTGCTGCAAGGCTTC+CGG	0.362167	5.3:-64066539	MS.gene29449:CDS
CTTTATCAACTCATTCACTA+TGG	0.363243	5.3:-64066366	MS.gene29449:CDS
CCAGTAATTCTTCACATCAT+TGG	0.377602	5.3:+64066507	None:intergenic
AAGACTATACTCCCAAATAT+TGG	0.386984	5.3:-64066259	MS.gene29449:CDS
TACACAAACTTCTGGGGAAC+AGG	0.401830	5.3:-64066982	MS.gene29449:intron
CTAAGGCTACACAAACTTCT+GGG	0.440029	5.3:-64066989	MS.gene29449:CDS
ATAGTCTTGTCACACTCTCT+TGG	0.461855	5.3:+64066274	None:intergenic
TACGCTCAGTGATTCCGATT+GGG	0.463622	5.3:-64066065	MS.gene29449:CDS
GTTGTGCATCACCAATATTT+GGG	0.464776	5.3:+64066248	None:intergenic
GTTGATAAAGTTCGAGGTCG+AGG	0.499120	5.3:+64066379	None:intergenic
GCAAAACTAGTGGGTGAAGA+TGG	0.501577	5.3:-64066304	MS.gene29449:CDS
CTCTTGCTCTTTATTACAAG+AGG	0.514599	5.3:-64066140	MS.gene29449:CDS
CTACGCTCAGTGATTCCGAT+TGG	0.522116	5.3:-64066066	MS.gene29449:CDS
CATTTAGTTCCTAAAAGAGC+AGG	0.524795	5.3:-64067287	MS.gene29449:intron
AAGACCAGAGGCGTGAGAAA+AGG	0.526806	5.3:-64067377	MS.gene29449:CDS
AAAAGGTGCATGGACATATG+AGG	0.529512	5.3:-64067360	MS.gene29449:CDS
TCCCACCACATAGTAGAAAG+TGG	0.533859	5.3:+64066208	None:intergenic
ACATCATTGGCTGTTCTACC+CGG	0.538561	5.3:+64066520	None:intergenic
ATCTCCCACTTTCTACTATG+TGG	0.539694	5.3:-64066213	MS.gene29449:CDS
GAATGAGTTGATAAAGTTCG+AGG	0.542787	5.3:+64066373	None:intergenic
GCCGGAAAAGTTGTAGATTG+AGG	0.555853	5.3:-64067078	MS.gene29449:CDS
AAAGGAATTGAAATCCCAAT+CGG	0.557492	5.3:+64066051	None:intergenic
TCCCACTTTCTACTATGTGG+TGG	0.561350	5.3:-64066210	MS.gene29449:CDS
TTGGGATTTCAATTCCTTTG+GGG	0.564675	5.3:-64066047	MS.gene29449:CDS
TGTATCAACAAATATGGTGA+AGG	0.577319	5.3:-64067317	MS.gene29449:CDS
CCCACTTTCTACTATGTGGT+GGG	0.579986	5.3:-64066209	MS.gene29449:CDS
ACGCAGGTTTGAATAGATGC+CGG	0.599786	5.3:-64067096	MS.gene29449:intron
ACAAGAGGAGAATTTCACTT+CGG	0.607690	5.3:-64066125	MS.gene29449:CDS
TGCTAGTGCAGCAAAACTAG+TGG	0.611174	5.3:-64066314	MS.gene29449:CDS
TGAGGAGGACAATCTACTCA+AGG	0.611389	5.3:-64067342	MS.gene29449:CDS
GTGGGAGAGTTTGTTAAACG+TGG	0.613607	5.3:-64066191	MS.gene29449:CDS
GAGGCGTGAGAAAAGGTGCA+TGG	0.616816	5.3:-64067370	MS.gene29449:CDS
GAAAAGTTGTAGATTGAGGT+GGG	0.628302	5.3:-64067074	MS.gene29449:CDS
CCCACCACATAGTAGAAAGT+GGG	0.628761	5.3:+64066209	None:intergenic
GCTAGTGCAGCAAAACTAGT+GGG	0.641701	5.3:-64066313	MS.gene29449:CDS
GATGGTCATTGATTGCTGCA+AGG	0.644969	5.3:-64066546	MS.gene29449:CDS
CAATCGGAATCACTGAGCGT+AGG	0.649608	5.3:+64066067	None:intergenic
GGAAAAGTTGTAGATTGAGG+TGG	0.655059	5.3:-64067075	MS.gene29449:CDS
CAACTAATTAAAGACCCCAA+AGG	0.667420	5.3:+64066033	None:intergenic
AGGTGCATGGACATATGAGG+AGG	0.682411	5.3:-64067357	MS.gene29449:CDS
TAAGGCTACACAAACTTCTG+GGG	0.683156	5.3:-64066988	MS.gene29449:CDS
GGTGATGCACAACCATGTGT+TGG	0.693947	5.3:-64066238	MS.gene29449:CDS
GTGCATATGGAAAAGACCAG+AGG	0.707799	5.3:-64067389	None:intergenic
AGTGGGAGATTACCAACACA+TGG	0.709814	5.3:+64066226	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTATAATAAATGTATAGA+TGG	-	chr5.3:64066855-64066874	MS.gene29449:intron	10.0%
!!	AGATGAAATATACTATAAAT+TGG	+	chr5.3:64066822-64066841	None:intergenic	15.0%
!!	CACAAATATATATTAAACTA+AGG	+	chr5.3:64066796-64066815	None:intergenic	15.0%
!!!	AATTGTTATTTGTACATATT+AGG	-	chr5.3:64066486-64066505	MS.gene29449:CDS	15.0%
!!!	ATTGTTATTTGTACATATTA+GGG	-	chr5.3:64066487-64066506	MS.gene29449:CDS	15.0%
!!!	TTATATTTAGAATATAAGCA+TGG	+	chr5.3:64066270-64066289	None:intergenic	15.0%
!!	ATGAAATTGATATGATTCTA+AGG	-	chr5.3:64066413-64066432	MS.gene29449:CDS	20.0%
!!!	TCTTCATTTTCTTCTTTTTT+TGG	+	chr5.3:64066965-64066984	None:intergenic	20.0%
!!!	TTGTTATTTGTACATATTAG+GGG	-	chr5.3:64066488-64066507	MS.gene29449:CDS	20.0%
!	AATTATTAAACTGTATACGC+AGG	-	chr5.3:64066307-64066326	MS.gene29449:CDS	25.0%
!	CTACTAGATCTAAATTAACA+AGG	+	chr5.3:64066518-64066537	None:intergenic	25.0%
!	GAAAGAAGTAATGAGAAAAT+TGG	-	chr5.3:64067256-64067275	MS.gene29449:intron	25.0%
!!!	GTGGAGGAATTTTTTAATAA+TGG	-	chr5.3:64067328-64067347	MS.gene29449:CDS	25.0%
	AAAGGAATTGAAATCCCAAT+CGG	+	chr5.3:64067371-64067390	None:intergenic	30.0%
	AAGACTATACTCCCAAATAT+TGG	-	chr5.3:64067160-64067179	MS.gene29449:intron	30.0%
	AAGGCTTGTATCAACAAATA+TGG	-	chr5.3:64066096-64066115	MS.gene29449:CDS	30.0%
	ACAAATATGGTGAAGGAAAA+TGG	-	chr5.3:64066109-64066128	MS.gene29449:CDS	30.0%
	ATTGGGATTTCAATTCCTTT+GGG	-	chr5.3:64067371-64067390	MS.gene29449:CDS	30.0%
	CTTTATCAACTCATTCACTA+TGG	-	chr5.3:64067053-64067072	MS.gene29449:CDS	30.0%
	GATCTACAATTACTTACATG+TGG	-	chr5.3:64066741-64066760	MS.gene29449:intron	30.0%
	TAAGTAATTGTAGATCGTTC+AGG	+	chr5.3:64066737-64066756	None:intergenic	30.0%
	TGTATCAACAAATATGGTGA+AGG	-	chr5.3:64066102-64066121	MS.gene29449:CDS	30.0%
!!	AAACTTTCTCTTTTGATTGC+GGG	+	chr5.3:64066385-64066404	None:intergenic	30.0%
!!	ATTTTTCTATACGCACTGAT+TGG	+	chr5.3:64066694-64066713	None:intergenic	30.0%
!!	GAAACTTTCTCTTTTGATTG+CGG	+	chr5.3:64066386-64066405	None:intergenic	30.0%
!!!	TTTTTCTATACGCACTGATT+GGG	+	chr5.3:64066693-64066712	None:intergenic	30.0%
	ACAAGAGGAGAATTTCACTT+CGG	-	chr5.3:64067294-64067313	MS.gene29449:CDS	35.0%
	CCAATGATGTGAAGAATTAC+TGG	-	chr5.3:64066912-64066931	MS.gene29449:intron	35.0%
	CCAGTAATTCTTCACATCAT+TGG	+	chr5.3:64066915-64066934	None:intergenic	35.0%
	CTCTTGCTCTTTATTACAAG+AGG	-	chr5.3:64067279-64067298	MS.gene29449:intron	35.0%
	GAAAAGTTGTAGATTGAGGT+GGG	-	chr5.3:64066345-64066364	MS.gene29449:CDS	35.0%
	GATTGGGATTTCAATTCCTT+TGG	-	chr5.3:64067370-64067389	MS.gene29449:CDS	35.0%
	GTTGTGCATCACCAATATTT+GGG	+	chr5.3:64067174-64067193	None:intergenic	35.0%
	TATGCTTCCAAATACCAACA+CGG	-	chr5.3:64066612-64066631	MS.gene29449:intron	35.0%
	TTGGGATTTCAATTCCTTTG+GGG	-	chr5.3:64067372-64067391	MS.gene29449:CDS	35.0%
!	ACCTCAATCTACAACTTTTC+CGG	+	chr5.3:64066345-64066364	None:intergenic	35.0%
!	ATACAAGTACCTGCTCTTTT+AGG	+	chr5.3:64066144-64066163	None:intergenic	35.0%
!	CATTTAGTTCCTAAAAGAGC+AGG	-	chr5.3:64066132-64066151	MS.gene29449:CDS	35.0%
!!	AACTTTCTCTTTTGATTGCG+GGG	+	chr5.3:64066384-64066403	None:intergenic	35.0%
!!	GAATGAGTTGATAAAGTTCG+AGG	+	chr5.3:64067049-64067068	None:intergenic	35.0%
!!!	TTTTCTATACGCACTGATTG+GGG	+	chr5.3:64066692-64066711	None:intergenic	35.0%
	ATCTCCCACTTTCTACTATG+TGG	-	chr5.3:64067206-64067225	MS.gene29449:intron	40.0%
	CTAAGGCTACACAAACTTCT+GGG	-	chr5.3:64066430-64066449	MS.gene29449:CDS	40.0%
	GGAAAAGTTGTAGATTGAGG+TGG	-	chr5.3:64066344-64066363	MS.gene29449:CDS	40.0%
	GGTTGTGCATCACCAATATT+TGG	+	chr5.3:64067175-64067194	None:intergenic	40.0%
	TAAGGCTACACAAACTTCTG+GGG	-	chr5.3:64066431-64066450	MS.gene29449:CDS	40.0%
!	AAAAGGTGCATGGACATATG+AGG	-	chr5.3:64066059-64066078	MS.gene29449:CDS	40.0%
!	CACTTCGGAGTTTTCAAATG+TGG	-	chr5.3:64067309-64067328	MS.gene29449:CDS	40.0%
!	TCTAAGGCTACACAAACTTC+TGG	-	chr5.3:64066429-64066448	MS.gene29449:CDS	40.0%
!	TTCGGAGTTTTCAAATGTGG+AGG	-	chr5.3:64067312-64067331	MS.gene29449:CDS	40.0%
!!	ATAGTCTTGTCACACTCTCT+TGG	+	chr5.3:64067148-64067167	None:intergenic	40.0%
	ACGCAGGTTTGAATAGATGC+CGG	-	chr5.3:64066323-64066342	MS.gene29449:CDS	45.0%
	AGTGGGAGATTACCAACACA+TGG	+	chr5.3:64067196-64067215	None:intergenic	45.0%
	ATTGATTGCTGCAAGGCTTC+CGG	-	chr5.3:64066880-64066899	MS.gene29449:intron	45.0%
	CCCACCACATAGTAGAAAGT+GGG	+	chr5.3:64067213-64067232	None:intergenic	45.0%
	CCCACTTTCTACTATGTGGT+GGG	-	chr5.3:64067210-64067229	MS.gene29449:intron	45.0%
	GCCGGAAAAGTTGTAGATTG+AGG	-	chr5.3:64066341-64066360	MS.gene29449:CDS	45.0%
	GCTAGTGCAGCAAAACTAGT+GGG	-	chr5.3:64067106-64067125	MS.gene29449:intron	45.0%
	TACGCTCAGTGATTCCGATT+GGG	-	chr5.3:64067354-64067373	MS.gene29449:CDS	45.0%
	TCCCACCACATAGTAGAAAG+TGG	+	chr5.3:64067214-64067233	None:intergenic	45.0%
	TCCCACTTTCTACTATGTGG+TGG	-	chr5.3:64067209-64067228	MS.gene29449:intron	45.0%
	TGAGGAGGACAATCTACTCA+AGG	-	chr5.3:64066077-64066096	MS.gene29449:CDS	45.0%
	TGCTAGTGCAGCAAAACTAG+TGG	-	chr5.3:64067105-64067124	MS.gene29449:intron	45.0%
	TTCCAAATACCAACACGGTG+TGG	-	chr5.3:64066617-64066636	MS.gene29449:intron	45.0%
!	ACATCATTGGCTGTTCTACC+CGG	+	chr5.3:64066902-64066921	None:intergenic	45.0%
!	GATGGTCATTGATTGCTGCA+AGG	-	chr5.3:64066873-64066892	MS.gene29449:intron	45.0%
!	GCAAAACTAGTGGGTGAAGA+TGG	-	chr5.3:64067115-64067134	MS.gene29449:intron	45.0%
!	GTTGATAAAGTTCGAGGTCG+AGG	+	chr5.3:64067043-64067062	None:intergenic	45.0%
!	TACACAAACTTCTGGGGAAC+AGG	-	chr5.3:64066437-64066456	MS.gene29449:CDS	45.0%
!!	GTGGGAGAGTTTGTTAAACG+TGG	-	chr5.3:64067228-64067247	MS.gene29449:intron	45.0%
	AGGTGCATGGACATATGAGG+AGG	-	chr5.3:64066062-64066081	MS.gene29449:CDS	50.0%
	CAATCGGAATCACTGAGCGT+AGG	+	chr5.3:64067355-64067374	None:intergenic	50.0%
	CCAACACGGTGTGGTGTAAA+CGG	-	chr5.3:64066626-64066645	MS.gene29449:intron	50.0%
	CTACGCTCAGTGATTCCGAT+TGG	-	chr5.3:64067353-64067372	MS.gene29449:CDS	50.0%
	GGTGATGCACAACCATGTGT+TGG	-	chr5.3:64067181-64067200	MS.gene29449:intron	50.0%
	TTGATTGCTGCAAGGCTTCC+GGG	-	chr5.3:64066881-64066900	MS.gene29449:intron	50.0%
!	AAGACCAGAGGCGTGAGAAA+AGG	-	chr5.3:64066042-64066061	MS.gene29449:CDS	50.0%
!	CACCACACCGTGTTGGTATT+TGG	+	chr5.3:64066622-64066641	None:intergenic	50.0%
	CCGTTTACACCACACCGTGT+TGG	+	chr5.3:64066629-64066648	None:intergenic	55.0%
!	GAGGCGTGAGAAAAGGTGCA+TGG	-	chr5.3:64066049-64066068	MS.gene29449:CDS	55.0%
!	TGCACCTTTTCTCACGCCTC+TGG	+	chr5.3:64066049-64066068	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	64066036	64067405	64066036	ID=MS.gene29449
chr5.3	mRNA	64066036	64067405	64066036	ID=MS.gene29449.t1;Parent=MS.gene29449
chr5.3	exon	64067288	64067405	64067288	ID=MS.gene29449.t1.exon1;Parent=MS.gene29449.t1
chr5.3	CDS	64067288	64067405	64067288	ID=cds.MS.gene29449.t1;Parent=MS.gene29449.t1
chr5.3	exon	64066983	64067112	64066983	ID=MS.gene29449.t1.exon2;Parent=MS.gene29449.t1
chr5.3	CDS	64066983	64067112	64066983	ID=cds.MS.gene29449.t1;Parent=MS.gene29449.t1
chr5.3	exon	64066036	64066567	64066036	ID=MS.gene29449.t1.exon3;Parent=MS.gene29449.t1
chr5.3	CDS	64066036	64066567	64066036	ID=cds.MS.gene29449.t1;Parent=MS.gene29449.t1

Gene Sequence

>MS.gene29449

ATGGAAAAGACCAGAGGCGTGAGAAAAGGTGCATGGACATATGAGGAGGACAATCTACTCAAGGCTTGTATCAACAAATATGGTGAAGGAAAATGGCATTTAGTTCCTAAAAGAGCAGGTACTTGTATTTATTTAATTGATTTGTTGATAAGAACATTTTTTTTTTGAGAGAATGATAAGAACATTATACAACTATCTACATATCTATAGTTAGAACTAACTCATGAGAAACCATGCTTATATTCTAAATATAAATATATCTTATGTCAAAAATTATTAAACTGTATACGCAGGTTTGAATAGATGCCGGAAAAGTTGTAGATTGAGGTGGGTGAATTATTTAAACCCCGCAATCAAAAGAGAAAGTTTCTCTCATGATGAAATTGATATGATTCTAAGGCTACACAAACTTCTGGGGAACAGGTATGTTATGAGAGCAAGTTATAATTAAATTGTTATTTGTACATATTAGGGGATATCCTTGTTAATTTAGATCTAGTAGTATATGTAATCTAGAATTAATTAACTAATTAATTAATTAGTTATTCTAGCATATAGTAGTATTTTATTTTCACATATGCTTCCAAATACCAACACGGTGTGGTGTAAACGGTAGATGCTTGAATTTCTTAACTATTTGATACAAATTCAATCCCCAATCAGTGCGTATAGAAAAATATATGTTAAAAAAAGTCTCGCCTGAACGATCTACAATTACTTACATGTGGAGATTTTTATTTTATTTTTGCAAGAGATACCTTAGTTTAATATATATTTGTGCTTCCAATTTATAGTATATTTCATCTCTTTACTCTTATTATTTATAATAAATGTATAGATGGTCATTGATTGCTGCAAGGCTTCCGGGTAGAACAGCCAATGATGTGAAGAATTACTGGCACACAAATTTGCGCAAGAAAGTGATTCCAAAAAAAGAAGAAAATGAAGAAAAAGAGAAATCTAAAGAAAGCATGATAAAAATCAAATCTCATGAAATTATCAAGCCTCGACCTCGAACTTTATCAACTCATTCACTATGGTTGAAGAAGAAACATAATTTAGTGAGTAATGCTAGTGCAGCAAAACTAGTGGGTGAAGATGGCAATGTTCCAAGAGAGTGTGACAAGACTATACTCCCAAATATTGGTGATGCACAACCATGTGTTGGTAATCTCCCACTTTCTACTATGTGGTGGGAGAGTTTGTTAAACGTGGATGAAGAAAGAAGTAATGAGAAAATTGGCTCTTGCTCTTTATTACAAGAGGAGAATTTCACTTCGGAGTTTTCAAATGTGGAGGAATTTTTTAATAATGGTCCTACGCTCAGTGATTCCGATTGGGATTTCAATTCCTTTGGGGTCTTTAATTAG

Protein sequence

>MS.gene29449.t1

MEKTRGVRKGAWTYEEDNLLKACINKYGEGKWHLVPKRAGLNRCRKSCRLRWVNYLNPAIKRESFSHDEIDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTNLRKKVIPKKEENEEKEKSKESMIKIKSHEIIKPRPRTLSTHSLWLKKKHNLVSNASAAKLVGEDGNVPRECDKTILPNIGDAQPCVGNLPLSTMWWESLLNVDEERSNEKIGSCSLLQEENFTSEFSNVEEFFNNGPTLSDSDWDFNSFGVFN