Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001914.t1 | XP_013447911.1 | 98.6 | 437 | 6 | 0 | 1 | 437 | 1 | 437 | 2.10E-253 | 884.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001914.t1 | Q94CD1 | 73.1 | 438 | 111 | 4 | 1 | 433 | 17 | 452 | 7.6e-191 | 667.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001914.t1 | A0A072TYM0 | 98.6 | 437 | 6 | 0 | 1 | 437 | 1 | 437 | 1.5e-253 | 884.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene001914 | MS.gene042317 | PPI |
MS.gene038905 | MS.gene001914 | PPI |
MS.gene069436 | MS.gene001914 | PPI |
MS.gene66891 | MS.gene001914 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001914.t1 | MTR_7g027175 | 98.627 | 437 | 6 | 0 | 1 | 437 | 1 | 437 | 0.0 | 896 |
MS.gene001914.t1 | MTR_3g098980 | 66.348 | 419 | 138 | 2 | 20 | 437 | 18 | 434 | 0.0 | 584 |
MS.gene001914.t1 | MTR_8g096530 | 61.449 | 428 | 160 | 3 | 12 | 437 | 4 | 428 | 0.0 | 538 |
MS.gene001914.t1 | MTR_4g007540 | 34.713 | 435 | 265 | 7 | 13 | 435 | 3 | 430 | 5.74e-85 | 267 |
MS.gene001914.t1 | MTR_2g105330 | 34.932 | 438 | 259 | 9 | 13 | 435 | 3 | 429 | 2.09e-84 | 265 |
MS.gene001914.t1 | MTR_2g064495 | 34.703 | 438 | 260 | 9 | 13 | 435 | 3 | 429 | 2.87e-83 | 262 |
MS.gene001914.t1 | MTR_8g075610 | 34.597 | 422 | 262 | 8 | 23 | 435 | 1 | 417 | 3.61e-79 | 251 |
MS.gene001914.t1 | MTR_5g076700 | 35.917 | 387 | 234 | 8 | 20 | 397 | 14 | 395 | 4.00e-77 | 247 |
MS.gene001914.t1 | MTR_1g081660 | 34.419 | 430 | 255 | 11 | 19 | 431 | 21 | 440 | 1.77e-75 | 243 |
MS.gene001914.t1 | MTR_1g053315 | 36.203 | 395 | 230 | 14 | 36 | 412 | 41 | 431 | 2.39e-74 | 240 |
MS.gene001914.t1 | MTR_7g114520 | 32.870 | 432 | 264 | 10 | 20 | 433 | 15 | 438 | 8.07e-73 | 236 |
MS.gene001914.t1 | MTR_7g114470 | 34.367 | 387 | 239 | 8 | 19 | 395 | 14 | 395 | 1.04e-72 | 236 |
MS.gene001914.t1 | MTR_1g040175 | 33.333 | 423 | 264 | 10 | 20 | 429 | 13 | 430 | 5.74e-72 | 234 |
MS.gene001914.t1 | MTR_1g040215 | 33.596 | 381 | 241 | 8 | 23 | 396 | 16 | 391 | 3.32e-71 | 232 |
MS.gene001914.t1 | MTR_7g114550 | 32.637 | 383 | 247 | 5 | 20 | 395 | 14 | 392 | 2.24e-68 | 224 |
MS.gene001914.t1 | MTR_7g084940 | 30.575 | 435 | 284 | 8 | 13 | 435 | 12 | 440 | 2.33e-68 | 224 |
MS.gene001914.t1 | MTR_7g114490 | 33.073 | 384 | 246 | 6 | 19 | 395 | 13 | 392 | 1.04e-67 | 224 |
MS.gene001914.t1 | MTR_7g114560 | 31.854 | 383 | 250 | 6 | 20 | 395 | 14 | 392 | 6.02e-66 | 218 |
MS.gene001914.t1 | MTR_1g040195 | 34.204 | 383 | 221 | 9 | 19 | 397 | 12 | 367 | 6.42e-66 | 218 |
MS.gene001914.t1 | MTR_3g112180 | 32.715 | 431 | 259 | 13 | 22 | 436 | 18 | 433 | 4.04e-65 | 216 |
MS.gene001914.t1 | MTR_3g049150 | 31.579 | 437 | 271 | 10 | 24 | 435 | 10 | 443 | 3.97e-64 | 213 |
MS.gene001914.t1 | MTR_3g026950 | 30.769 | 442 | 266 | 12 | 24 | 432 | 10 | 444 | 8.11e-64 | 212 |
MS.gene001914.t1 | MTR_4g055170 | 32.589 | 448 | 265 | 15 | 18 | 436 | 14 | 453 | 4.37e-62 | 208 |
MS.gene001914.t1 | MTR_1g040320 | 30.024 | 423 | 242 | 10 | 20 | 429 | 13 | 394 | 1.95e-61 | 205 |
MS.gene001914.t1 | MTR_7g056087 | 30.626 | 431 | 281 | 8 | 20 | 435 | 8 | 435 | 4.84e-61 | 205 |
MS.gene001914.t1 | MTR_7g084910 | 30.935 | 417 | 255 | 11 | 22 | 426 | 23 | 418 | 6.66e-61 | 204 |
MS.gene001914.t1 | MTR_4g127650 | 32.840 | 405 | 231 | 10 | 24 | 396 | 18 | 413 | 3.09e-59 | 201 |
MS.gene001914.t1 | MTR_1g040315 | 32.546 | 381 | 210 | 11 | 21 | 396 | 14 | 352 | 2.28e-55 | 189 |
MS.gene001914.t1 | MTR_3g071320 | 31.422 | 436 | 269 | 12 | 20 | 436 | 9 | 433 | 2.44e-55 | 189 |
MS.gene001914.t1 | MTR_4g097090 | 30.049 | 406 | 239 | 10 | 24 | 395 | 17 | 411 | 2.37e-49 | 174 |
MS.gene001914.t1 | MTR_7g086000 | 30.310 | 419 | 240 | 16 | 13 | 391 | 2 | 408 | 1.48e-46 | 167 |
MS.gene001914.t1 | MTR_3g465930 | 32.750 | 400 | 228 | 15 | 23 | 392 | 17 | 405 | 2.77e-45 | 164 |
MS.gene001914.t1 | MTR_3g465910 | 32.500 | 400 | 226 | 15 | 23 | 392 | 17 | 402 | 1.37e-44 | 163 |
MS.gene001914.t1 | MTR_2g015430 | 29.056 | 413 | 274 | 11 | 39 | 437 | 29 | 436 | 1.42e-44 | 161 |
MS.gene001914.t1 | MTR_3g465990 | 31.421 | 401 | 228 | 17 | 23 | 392 | 17 | 401 | 5.68e-44 | 160 |
MS.gene001914.t1 | MTR_3g465980 | 32.170 | 401 | 225 | 19 | 23 | 392 | 17 | 401 | 1.37e-43 | 159 |
MS.gene001914.t1 | MTR_6g053810 | 31.635 | 373 | 229 | 12 | 38 | 392 | 42 | 406 | 1.61e-43 | 159 |
MS.gene001914.t1 | MTR_0502s0010 | 36.250 | 240 | 141 | 6 | 104 | 338 | 1 | 233 | 7.54e-43 | 151 |
MS.gene001914.t1 | MTR_7g114510 | 30.169 | 295 | 192 | 6 | 149 | 433 | 6 | 296 | 6.41e-41 | 148 |
MS.gene001914.t1 | MTR_4g013050 | 24.887 | 442 | 274 | 11 | 14 | 435 | 3 | 406 | 9.16e-41 | 150 |
MS.gene001914.t1 | MTR_7g085990 | 28.906 | 384 | 231 | 10 | 51 | 396 | 37 | 416 | 5.84e-40 | 149 |
MS.gene001914.t1 | MTR_3g465950 | 34.740 | 308 | 183 | 11 | 65 | 360 | 65 | 366 | 3.10e-39 | 147 |
MS.gene001914.t1 | MTR_7g085930 | 28.894 | 398 | 213 | 12 | 51 | 396 | 41 | 420 | 5.04e-39 | 146 |
MS.gene001914.t1 | MTR_3g465880 | 28.222 | 450 | 283 | 16 | 23 | 436 | 17 | 462 | 3.78e-38 | 144 |
MS.gene001914.t1 | MTR_7g110610 | 30.102 | 392 | 192 | 15 | 23 | 397 | 12 | 338 | 9.36e-35 | 133 |
MS.gene001914.t1 | MTR_3g086020 | 26.866 | 402 | 247 | 15 | 23 | 408 | 12 | 382 | 1.36e-34 | 133 |
MS.gene001914.t1 | MTR_0042s0190 | 31.034 | 232 | 149 | 7 | 169 | 395 | 1 | 226 | 2.27e-32 | 124 |
MS.gene001914.t1 | MTR_5g090810 | 27.621 | 391 | 241 | 13 | 37 | 393 | 31 | 413 | 6.52e-32 | 127 |
MS.gene001914.t1 | MTR_5g090830 | 27.366 | 391 | 242 | 13 | 37 | 393 | 31 | 413 | 4.24e-31 | 124 |
MS.gene001914.t1 | MTR_3g101960 | 29.841 | 315 | 195 | 10 | 56 | 356 | 56 | 358 | 2.16e-29 | 119 |
MS.gene001914.t1 | MTR_3g101930 | 26.847 | 406 | 252 | 16 | 55 | 432 | 57 | 445 | 2.09e-27 | 114 |
MS.gene001914.t1 | MTR_4g094828 | 26.980 | 404 | 248 | 17 | 58 | 429 | 49 | 437 | 8.41e-27 | 112 |
MS.gene001914.t1 | MTR_3g465870 | 31.818 | 308 | 186 | 12 | 12 | 302 | 7 | 307 | 2.61e-26 | 110 |
MS.gene001914.t1 | MTR_0190s0020 | 25.450 | 389 | 259 | 10 | 63 | 433 | 58 | 433 | 5.16e-26 | 109 |
MS.gene001914.t1 | MTR_3g102020 | 29.206 | 315 | 197 | 10 | 56 | 356 | 57 | 359 | 7.99e-26 | 109 |
MS.gene001914.t1 | MTR_4g094842 | 26.485 | 404 | 255 | 14 | 54 | 429 | 46 | 435 | 9.34e-26 | 109 |
MS.gene001914.t1 | MTR_3g101900 | 25.248 | 404 | 258 | 13 | 55 | 432 | 53 | 438 | 1.28e-25 | 108 |
MS.gene001914.t1 | MTR_5g090880 | 26.425 | 386 | 235 | 16 | 46 | 393 | 41 | 415 | 2.05e-25 | 108 |
MS.gene001914.t1 | MTR_3g101970 | 29.355 | 310 | 189 | 11 | 56 | 356 | 57 | 345 | 2.25e-25 | 107 |
MS.gene001914.t1 | MTR_3g049140 | 32.692 | 208 | 124 | 3 | 244 | 435 | 33 | 240 | 2.72e-25 | 104 |
MS.gene001914.t1 | MTR_3g088420 | 25.897 | 390 | 266 | 12 | 63 | 437 | 50 | 431 | 3.15e-25 | 107 |
MS.gene001914.t1 | MTR_7g114420 | 30.638 | 235 | 125 | 7 | 169 | 397 | 1 | 203 | 8.53e-25 | 103 |
MS.gene001914.t1 | MTR_4g022670 | 27.132 | 387 | 244 | 13 | 68 | 429 | 55 | 428 | 1.93e-24 | 105 |
MS.gene001914.t1 | MTR_4g022800 | 25.897 | 390 | 256 | 14 | 63 | 429 | 50 | 429 | 2.56e-24 | 105 |
MS.gene001914.t1 | MTR_4g022720 | 25.501 | 349 | 230 | 10 | 63 | 392 | 50 | 387 | 3.02e-24 | 104 |
MS.gene001914.t1 | MTR_4g094835 | 25.570 | 395 | 250 | 16 | 61 | 429 | 57 | 433 | 3.59e-24 | 104 |
MS.gene001914.t1 | MTR_3g450710 | 25.907 | 386 | 237 | 13 | 45 | 394 | 41 | 413 | 9.83e-24 | 103 |
MS.gene001914.t1 | MTR_7g114500 | 35.971 | 139 | 86 | 2 | 20 | 155 | 14 | 152 | 1.07e-23 | 97.1 |
MS.gene001914.t1 | MTR_8g079710 | 26.799 | 403 | 245 | 19 | 58 | 429 | 49 | 432 | 2.14e-23 | 102 |
MS.gene001914.t1 | MTR_4g094838 | 25.281 | 356 | 212 | 11 | 61 | 392 | 57 | 382 | 2.56e-23 | 102 |
MS.gene001914.t1 | MTR_0042s0230 | 40.441 | 136 | 78 | 2 | 19 | 151 | 12 | 147 | 2.98e-23 | 95.9 |
MS.gene001914.t1 | MTR_3g450690 | 25.634 | 355 | 227 | 11 | 68 | 394 | 72 | 417 | 3.14e-23 | 102 |
MS.gene001914.t1 | MTR_6g045553 | 26.834 | 477 | 283 | 22 | 13 | 437 | 12 | 474 | 8.40e-23 | 100 |
MS.gene001914.t1 | MTR_4g022290 | 25.815 | 399 | 253 | 15 | 58 | 429 | 50 | 432 | 1.01e-22 | 100 |
MS.gene001914.t1 | MTR_5g026320 | 24.876 | 402 | 260 | 14 | 37 | 415 | 41 | 423 | 2.26e-22 | 99.4 |
MS.gene001914.t1 | MTR_8g041770 | 26.393 | 341 | 232 | 10 | 63 | 392 | 59 | 391 | 2.59e-22 | 99.0 |
MS.gene001914.t1 | MTR_1g094790 | 25.000 | 376 | 234 | 13 | 68 | 413 | 60 | 417 | 2.78e-22 | 99.0 |
MS.gene001914.t1 | MTR_3g051790 | 37.705 | 122 | 73 | 2 | 20 | 138 | 17 | 138 | 3.49e-22 | 93.6 |
MS.gene001914.t1 | MTR_7g114960 | 25.627 | 359 | 248 | 11 | 12 | 362 | 5 | 352 | 3.56e-22 | 99.0 |
MS.gene001914.t1 | MTR_4g094832 | 26.648 | 349 | 223 | 14 | 98 | 429 | 85 | 417 | 1.74e-21 | 96.7 |
MS.gene001914.t1 | MTR_7g026860 | 24.740 | 384 | 264 | 12 | 63 | 429 | 50 | 425 | 1.76e-21 | 96.7 |
MS.gene001914.t1 | MTR_8g079970 | 25.122 | 410 | 249 | 16 | 13 | 392 | 1 | 382 | 3.25e-21 | 95.9 |
MS.gene001914.t1 | MTR_8g467590 | 24.198 | 405 | 268 | 14 | 7 | 392 | 2 | 386 | 5.13e-21 | 95.5 |
MS.gene001914.t1 | MTR_4g022760 | 28.571 | 273 | 177 | 9 | 68 | 327 | 55 | 322 | 6.35e-21 | 94.7 |
MS.gene001914.t1 | MTR_3g070170 | 24.251 | 367 | 223 | 11 | 68 | 392 | 66 | 419 | 6.70e-21 | 95.1 |
MS.gene001914.t1 | MTR_5g081960 | 23.316 | 386 | 228 | 11 | 67 | 393 | 60 | 436 | 1.01e-20 | 94.7 |
MS.gene001914.t1 | MTR_0042s0190 | 30.303 | 165 | 108 | 4 | 234 | 395 | 1 | 161 | 1.30e-20 | 90.5 |
MS.gene001914.t1 | MTR_4g022825 | 26.410 | 390 | 242 | 17 | 68 | 429 | 55 | 427 | 2.72e-20 | 93.2 |
MS.gene001914.t1 | MTR_8g079950 | 22.667 | 450 | 289 | 16 | 13 | 432 | 1 | 421 | 3.41e-20 | 92.8 |
MS.gene001914.t1 | MTR_5g084870 | 21.995 | 441 | 297 | 14 | 13 | 432 | 1 | 415 | 1.90e-19 | 90.5 |
MS.gene001914.t1 | MTR_7g014330 | 24.148 | 352 | 235 | 10 | 68 | 391 | 62 | 409 | 6.60e-19 | 89.0 |
MS.gene001914.t1 | MTR_8g467580 | 24.225 | 355 | 221 | 11 | 63 | 392 | 55 | 386 | 1.10e-18 | 88.2 |
MS.gene001914.t1 | MTR_3g102010 | 25.123 | 406 | 260 | 15 | 15 | 390 | 7 | 398 | 1.81e-18 | 87.8 |
MS.gene001914.t1 | MTR_7g014160 | 24.155 | 414 | 257 | 16 | 67 | 435 | 68 | 469 | 4.82e-18 | 86.7 |
MS.gene001914.t1 | MTR_7g014200 | 23.833 | 407 | 260 | 14 | 68 | 435 | 69 | 464 | 1.55e-17 | 85.1 |
MS.gene001914.t1 | MTR_2g089735 | 23.333 | 360 | 236 | 12 | 68 | 392 | 62 | 416 | 1.64e-17 | 84.7 |
MS.gene001914.t1 | MTR_7g014230 | 24.716 | 352 | 233 | 10 | 68 | 391 | 64 | 411 | 2.72e-17 | 84.3 |
MS.gene001914.t1 | MTR_5g084900 | 23.421 | 380 | 226 | 13 | 68 | 432 | 9 | 338 | 7.15e-17 | 82.0 |
MS.gene001914.t1 | MTR_2g089650 | 23.741 | 417 | 278 | 12 | 12 | 392 | 6 | 418 | 7.58e-17 | 82.8 |
MS.gene001914.t1 | MTR_4g007460 | 31.159 | 138 | 82 | 3 | 82 | 217 | 1 | 127 | 2.37e-16 | 76.3 |
MS.gene001914.t1 | MTR_3g035000 | 25.758 | 198 | 116 | 6 | 202 | 397 | 43 | 211 | 6.81e-16 | 78.6 |
MS.gene001914.t1 | MTR_7g014610 | 22.837 | 416 | 263 | 15 | 67 | 435 | 67 | 471 | 1.65e-14 | 75.9 |
MS.gene001914.t1 | MTR_6g015815 | 24.286 | 350 | 232 | 12 | 68 | 391 | 70 | 412 | 2.19e-14 | 75.1 |
MS.gene001914.t1 | MTR_2g089765 | 24.138 | 377 | 234 | 14 | 67 | 399 | 74 | 442 | 2.44e-14 | 75.1 |
MS.gene001914.t1 | MTR_8g039950 | 34.906 | 106 | 66 | 2 | 21 | 123 | 14 | 119 | 2.71e-14 | 69.7 |
MS.gene001914.t1 | MTR_6g015320 | 23.134 | 268 | 172 | 8 | 150 | 391 | 147 | 406 | 3.46e-13 | 71.6 |
MS.gene001914.t1 | MTR_2g089670 | 21.703 | 364 | 231 | 11 | 67 | 391 | 81 | 429 | 1.61e-12 | 69.7 |
MS.gene001914.t1 | MTR_1g011660 | 22.189 | 338 | 212 | 12 | 48 | 359 | 39 | 351 | 2.16e-12 | 68.9 |
MS.gene001914.t1 | MTR_7g085960 | 27.451 | 153 | 77 | 3 | 261 | 396 | 11 | 146 | 3.48e-12 | 65.5 |
MS.gene001914.t1 | MTR_6g016815 | 25.941 | 239 | 150 | 9 | 63 | 290 | 64 | 286 | 3.80e-12 | 67.8 |
MS.gene001914.t1 | MTR_8g012750 | 22.520 | 373 | 242 | 11 | 67 | 397 | 61 | 428 | 6.02e-12 | 67.8 |
MS.gene001914.t1 | MTR_3g100150 | 24.051 | 237 | 159 | 7 | 48 | 275 | 46 | 270 | 7.31e-12 | 67.4 |
MS.gene001914.t1 | MTR_2g045550 | 28.947 | 152 | 97 | 5 | 15 | 165 | 4 | 145 | 1.13e-11 | 62.8 |
MS.gene001914.t1 | MTR_3g049080 | 36.986 | 73 | 44 | 1 | 24 | 94 | 10 | 82 | 4.06e-11 | 59.3 |
MS.gene001914.t1 | MTR_7g013850 | 21.163 | 430 | 270 | 17 | 62 | 436 | 62 | 477 | 4.33e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001914.t1 | AT5G41040 | 74.822 | 421 | 103 | 3 | 20 | 437 | 37 | 457 | 0.0 | 673 |
MS.gene001914.t1 | AT5G41040 | 74.822 | 421 | 103 | 3 | 20 | 437 | 21 | 441 | 0.0 | 671 |
MS.gene001914.t1 | AT5G63560 | 61.520 | 421 | 152 | 4 | 20 | 437 | 13 | 426 | 0.0 | 529 |
MS.gene001914.t1 | AT3G48720 | 55.847 | 419 | 181 | 3 | 21 | 437 | 14 | 430 | 1.91e-178 | 505 |
MS.gene001914.t1 | AT5G48930 | 33.945 | 436 | 269 | 7 | 12 | 435 | 2 | 430 | 2.32e-82 | 260 |
MS.gene001914.t1 | AT1G03390 | 35.973 | 442 | 263 | 14 | 13 | 437 | 19 | 457 | 4.82e-78 | 250 |
MS.gene001914.t1 | AT1G65450 | 35.828 | 441 | 256 | 14 | 14 | 436 | 15 | 446 | 1.57e-76 | 245 |
MS.gene001914.t1 | AT1G27620 | 33.724 | 427 | 260 | 9 | 19 | 435 | 12 | 425 | 8.01e-74 | 238 |
MS.gene001914.t1 | AT5G17540 | 32.637 | 383 | 247 | 7 | 20 | 395 | 13 | 391 | 2.15e-64 | 214 |
MS.gene001914.t1 | AT3G03480 | 34.987 | 383 | 231 | 10 | 23 | 395 | 26 | 400 | 1.44e-62 | 209 |
MS.gene001914.t1 | AT5G57840 | 33.416 | 401 | 233 | 10 | 12 | 390 | 2 | 390 | 2.29e-57 | 195 |
MS.gene001914.t1 | AT1G28680 | 32.258 | 434 | 270 | 12 | 20 | 435 | 13 | 440 | 3.97e-57 | 195 |
MS.gene001914.t1 | AT2G19070 | 32.000 | 400 | 238 | 11 | 26 | 396 | 14 | 408 | 5.79e-57 | 194 |
MS.gene001914.t1 | AT2G40230 | 31.019 | 432 | 270 | 11 | 20 | 435 | 9 | 428 | 9.26e-55 | 188 |
MS.gene001914.t1 | AT1G28680 | 32.565 | 347 | 222 | 8 | 20 | 360 | 13 | 353 | 2.00e-50 | 176 |
MS.gene001914.t1 | AT4G31910 | 29.953 | 424 | 260 | 12 | 31 | 423 | 26 | 443 | 9.87e-48 | 170 |
MS.gene001914.t1 | AT5G07080 | 30.000 | 440 | 270 | 16 | 19 | 433 | 17 | 443 | 4.68e-45 | 162 |
MS.gene001914.t1 | AT1G65450 | 32.526 | 289 | 175 | 8 | 161 | 436 | 1 | 282 | 2.59e-44 | 156 |
MS.gene001914.t1 | AT2G25150 | 30.995 | 442 | 264 | 14 | 23 | 435 | 20 | 449 | 6.59e-42 | 154 |
MS.gene001914.t1 | AT3G47170 | 29.018 | 448 | 283 | 13 | 19 | 433 | 15 | 460 | 1.09e-41 | 154 |
MS.gene001914.t1 | AT3G62160 | 29.668 | 391 | 237 | 12 | 22 | 397 | 11 | 378 | 1.82e-41 | 152 |
MS.gene001914.t1 | AT2G23510 | 29.120 | 443 | 271 | 16 | 23 | 436 | 20 | 448 | 8.49e-38 | 143 |
MS.gene001914.t1 | AT1G78990 | 27.228 | 404 | 243 | 15 | 48 | 414 | 46 | 435 | 3.82e-33 | 130 |
MS.gene001914.t1 | AT1G24430 | 28.058 | 417 | 253 | 17 | 35 | 432 | 27 | 415 | 5.41e-31 | 124 |
MS.gene001914.t1 | AT1G32910 | 25.068 | 367 | 246 | 11 | 46 | 393 | 44 | 400 | 7.98e-30 | 121 |
MS.gene001914.t1 | AT1G31490 | 27.366 | 391 | 250 | 14 | 37 | 410 | 29 | 402 | 1.27e-29 | 120 |
MS.gene001914.t1 | AT5G16410 | 26.823 | 384 | 243 | 15 | 37 | 400 | 61 | 426 | 1.11e-27 | 115 |
MS.gene001914.t1 | AT5G07870 | 28.754 | 313 | 196 | 9 | 62 | 356 | 66 | 369 | 1.02e-26 | 112 |
MS.gene001914.t1 | AT5G42830 | 28.902 | 346 | 218 | 10 | 29 | 356 | 22 | 357 | 1.99e-26 | 111 |
MS.gene001914.t1 | AT2G39980 | 26.720 | 378 | 214 | 12 | 68 | 392 | 62 | 429 | 8.18e-26 | 109 |
MS.gene001914.t1 | AT5G23940 | 27.586 | 406 | 258 | 14 | 51 | 429 | 43 | 439 | 5.92e-24 | 104 |
MS.gene001914.t1 | AT5G61160 | 25.634 | 355 | 233 | 12 | 68 | 399 | 64 | 410 | 8.83e-24 | 103 |
MS.gene001914.t1 | AT5G07860 | 27.508 | 309 | 195 | 8 | 62 | 356 | 66 | 359 | 1.06e-23 | 103 |
MS.gene001914.t1 | AT3G29670 | 24.112 | 394 | 271 | 12 | 48 | 419 | 42 | 429 | 1.12e-23 | 103 |
MS.gene001914.t1 | AT3G29635 | 24.548 | 387 | 266 | 11 | 71 | 436 | 70 | 451 | 1.48e-23 | 102 |
MS.gene001914.t1 | AT3G50270 | 26.768 | 396 | 245 | 18 | 68 | 434 | 62 | 441 | 3.17e-23 | 102 |
MS.gene001914.t1 | AT4G15390 | 23.624 | 436 | 286 | 16 | 23 | 432 | 15 | 429 | 1.20e-22 | 100 |
MS.gene001914.t1 | AT4G15390 | 23.624 | 436 | 286 | 16 | 23 | 432 | 15 | 429 | 1.20e-22 | 100 |
MS.gene001914.t1 | AT1G24420 | 24.110 | 365 | 245 | 10 | 79 | 432 | 76 | 419 | 2.36e-22 | 99.4 |
MS.gene001914.t1 | AT1G24420 | 24.110 | 365 | 245 | 10 | 79 | 432 | 76 | 419 | 2.36e-22 | 99.4 |
MS.gene001914.t1 | AT3G30280 | 26.157 | 432 | 263 | 22 | 23 | 424 | 13 | 418 | 2.81e-21 | 96.3 |
MS.gene001914.t1 | AT5G47950 | 24.190 | 401 | 255 | 17 | 48 | 432 | 42 | 409 | 5.45e-20 | 92.0 |
MS.gene001914.t1 | AT3G50280 | 22.680 | 388 | 269 | 14 | 68 | 434 | 59 | 436 | 1.97e-19 | 90.5 |
MS.gene001914.t1 | AT5G23970 | 23.472 | 409 | 259 | 12 | 37 | 421 | 24 | 402 | 1.46e-18 | 87.8 |
MS.gene001914.t1 | AT5G38130 | 24.251 | 367 | 250 | 12 | 71 | 419 | 82 | 438 | 1.51e-18 | 88.2 |
MS.gene001914.t1 | AT3G29590 | 25.220 | 341 | 223 | 13 | 76 | 392 | 69 | 401 | 8.19e-18 | 85.9 |
MS.gene001914.t1 | AT1G65450 | 44.444 | 117 | 59 | 5 | 14 | 125 | 15 | 130 | 1.14e-17 | 80.5 |
MS.gene001914.t1 | AT4G15400 | 24.122 | 427 | 289 | 17 | 23 | 433 | 12 | 419 | 3.61e-17 | 83.6 |
MS.gene001914.t1 | AT3G29680 | 22.739 | 387 | 275 | 8 | 68 | 435 | 62 | 443 | 3.72e-17 | 84.0 |
MS.gene001914.t1 | AT5G67150 | 23.592 | 373 | 232 | 15 | 68 | 407 | 61 | 413 | 8.78e-17 | 82.8 |
MS.gene001914.t1 | AT5G07850 | 25.364 | 343 | 216 | 14 | 20 | 343 | 27 | 348 | 1.59e-16 | 82.0 |
MS.gene001914.t1 | AT3G50300 | 24.064 | 374 | 250 | 13 | 68 | 419 | 59 | 420 | 1.20e-15 | 79.0 |
MS.gene001914.t1 | AT4G29250 | 22.991 | 448 | 297 | 17 | 15 | 433 | 14 | 442 | 2.03e-14 | 75.5 |
MS.gene001914.t1 | AT5G39090 | 23.016 | 378 | 264 | 11 | 78 | 436 | 75 | 444 | 2.42e-14 | 75.1 |
MS.gene001914.t1 | AT1G03495 | 27.778 | 288 | 168 | 15 | 68 | 322 | 66 | 346 | 1.42e-13 | 72.0 |
MS.gene001914.t1 | AT3G50280 | 22.295 | 305 | 217 | 10 | 142 | 434 | 10 | 306 | 3.38e-13 | 70.5 |
MS.gene001914.t1 | AT1G03940 | 24.510 | 408 | 257 | 17 | 68 | 436 | 66 | 461 | 4.50e-12 | 68.2 |
MS.gene001914.t1 | AT3G50290 | 24.906 | 265 | 183 | 7 | 137 | 389 | 9 | 269 | 2.44e-11 | 64.7 |
MS.gene001914.t1 | AT5G39050 | 21.725 | 313 | 219 | 6 | 150 | 436 | 152 | 464 | 4.82e-11 | 65.1 |
MS.gene001914.t1 | AT4G13840 | 25.871 | 201 | 125 | 7 | 84 | 275 | 83 | 268 | 7.42e-11 | 64.3 |
Find 86 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACTTCCAAAAGGGTATTT+TGG | 0.109330 | 7.3:+72787833 | MS.gene001914:CDS |
AGAAGCTTTGTTTCTTGTTC+TGG | 0.223449 | 7.3:-72787776 | None:intergenic |
GTCTGGACCGGTTTCCTTGC+CGG | 0.230469 | 7.3:+72788099 | MS.gene001914:CDS |
CACCATTTCGTCTTCATATA+AGG | 0.238204 | 7.3:-72787603 | None:intergenic |
CTTCAATGTCAGCAAATTCT+TGG | 0.238280 | 7.3:-72787562 | None:intergenic |
GAAAATTCTAATTATCAAAA+TGG | 0.257291 | 7.3:+72786020 | MS.gene001914:CDS |
CCAAGATTTAATGCAGATAT+AGG | 0.271308 | 7.3:+72788213 | MS.gene001914:CDS |
CACTGTATGTTTGATGGAAT+TGG | 0.294988 | 7.3:+72787419 | MS.gene001914:CDS |
CCGTTTCATACCACCGATTT+CGG | 0.298332 | 7.3:+72788058 | MS.gene001914:CDS |
AATTGTTCAATGGAAGAAAT+TGG | 0.299341 | 7.3:+72786347 | MS.gene001914:CDS |
CCTTTCTTTGTTTCTTCAGA+TGG | 0.304433 | 7.3:-72786092 | None:intergenic |
AACAAGAGCTAGGCCATCTT+TGG | 0.319090 | 7.3:+72788000 | MS.gene001914:CDS |
TGGTGCAAATGCTCTATCTT+CGG | 0.344041 | 7.3:-72787542 | None:intergenic |
GTTCATTATTACCCTCTTGC+TGG | 0.346873 | 7.3:+72786245 | MS.gene001914:CDS |
AAGTGCTTTCAGCATTTGTT+TGG | 0.353137 | 7.3:+72787723 | MS.gene001914:CDS |
CCATTCCCAAAATACCCTTT+TGG | 0.354945 | 7.3:-72787839 | None:intergenic |
AGAAGCATTAATGTGCTTCT+TGG | 0.357845 | 7.3:+72788163 | MS.gene001914:CDS |
GGTGCAAATGCTCTATCTTC+GGG | 0.375653 | 7.3:-72787541 | None:intergenic |
CGATTTCGGTTGGGGAGAAC+CGG | 0.379270 | 7.3:+72788072 | MS.gene001914:CDS |
GAATGCTTGTGAAGTGATTA+AGG | 0.383599 | 7.3:+72786202 | MS.gene001914:CDS |
CCTATATCTGCATTAAATCT+TGG | 0.386363 | 7.3:-72788213 | None:intergenic |
TATTCTTCAGATGCCTCCTT+TGG | 0.394177 | 7.3:+72786436 | MS.gene001914:CDS |
TCCTTCTCCGGCAAGGAAAC+CGG | 0.400213 | 7.3:-72788106 | None:intergenic |
GATGCCTCCTTTGGTTGCTC+AGG | 0.401248 | 7.3:+72786445 | MS.gene001914:CDS |
AGTATGCTTCGGTCGAGAAC+TGG | 0.410989 | 7.3:-72787503 | None:intergenic |
TCATACCACCGATTTCGGTT+GGG | 0.412037 | 7.3:+72788063 | MS.gene001914:CDS |
CGGTTCTCCCCAACCGAAAT+CGG | 0.413358 | 7.3:-72788071 | None:intergenic |
TGGGGAGAACCGGTTCTGTC+TGG | 0.419323 | 7.3:+72788082 | MS.gene001914:CDS |
TTCATATAAGGTACTAGTGT+TGG | 0.419653 | 7.3:-72787591 | None:intergenic |
AACAAAATCACTTCCTTCTC+CGG | 0.435908 | 7.3:-72788118 | None:intergenic |
CATACCACCGATTTCGGTTG+GGG | 0.437822 | 7.3:+72788064 | MS.gene001914:CDS |
TCCAAGGACTCTTGGTATGT+TGG | 0.438373 | 7.3:+72786388 | MS.gene001914:CDS |
TTCATACCACCGATTTCGGT+TGG | 0.441418 | 7.3:+72788062 | MS.gene001914:CDS |
TTTGAACCAAAACTTCCAAA+AGG | 0.445633 | 7.3:+72787824 | MS.gene001914:CDS |
TTCTTTGTTTCTTCAGATGG+TGG | 0.446811 | 7.3:-72786089 | None:intergenic |
AACCTTCACCGTATACGAAA+AGG | 0.447710 | 7.3:-72787912 | None:intergenic |
TACCTTATATGAAGACGAAA+TGG | 0.450394 | 7.3:+72787601 | MS.gene001914:CDS |
TGCGCACCTTTAGTATGCTT+CGG | 0.452621 | 7.3:-72787514 | None:intergenic |
TGAAGAATATGTTTAGCATC+AGG | 0.461984 | 7.3:-72786422 | None:intergenic |
AAACCTGATCCAAGGACTCT+TGG | 0.464374 | 7.3:+72786380 | MS.gene001914:CDS |
ATGAATCACTGTATGTTTGA+TGG | 0.464465 | 7.3:+72787413 | MS.gene001914:CDS |
ATACCAAGAGTCCTTGGATC+AGG | 0.478213 | 7.3:-72786383 | None:intergenic |
ACCAACATACCAAGAGTCCT+TGG | 0.479611 | 7.3:-72786389 | None:intergenic |
GGCTGAAGCTAATTGTTCAA+TGG | 0.480046 | 7.3:+72786337 | MS.gene001914:CDS |
TCAGATGGTGGAACAAGTGT+TGG | 0.489688 | 7.3:-72786077 | None:intergenic |
ACCGGTTTCCTTGCCGGAGA+AGG | 0.494266 | 7.3:+72788105 | MS.gene001914:CDS |
CTATGGAGTTTGTGAACTCA+TGG | 0.496901 | 7.3:+72787444 | MS.gene001914:CDS |
AAAACCTCCACATTTGAACT+TGG | 0.504811 | 7.3:-72787375 | None:intergenic |
CTCAGAGGGTAAACTGATTG+TGG | 0.510531 | 7.3:+72786283 | MS.gene001914:CDS |
TTGTGCAAGATTCAAGAATA+CGG | 0.516638 | 7.3:-72787694 | None:intergenic |
ACAAACGCTGTTTGTAAAGC+AGG | 0.525354 | 7.3:+72787872 | MS.gene001914:CDS |
ACCTTCACCGTATACGAAAA+GGG | 0.526148 | 7.3:-72787911 | None:intergenic |
AAGATCTTCATGACAGGAGC+AGG | 0.527288 | 7.3:-72788190 | None:intergenic |
TTGAACCAAAACTTCCAAAA+GGG | 0.529877 | 7.3:+72787825 | MS.gene001914:CDS |
TCCTCTCTTGACCATGTGAA+AGG | 0.539507 | 7.3:-72788141 | None:intergenic |
GTTTGATGGAATTGGAGCTA+TGG | 0.548532 | 7.3:+72787427 | MS.gene001914:CDS |
GAAACCGGTCCAGACAGAAC+CGG | 0.551440 | 7.3:-72788091 | None:intergenic |
CCGAAATCGGTGGTATGAAA+CGG | 0.552192 | 7.3:-72788058 | None:intergenic |
AAAAGTGTACAAGCCAAAGA+TGG | 0.555885 | 7.3:-72788013 | None:intergenic |
AGAACCGGTTCTGTCTGGAC+CGG | 0.557075 | 7.3:+72788087 | MS.gene001914:CDS |
TATTCAAGATGCAATCAAGA+TGG | 0.561804 | 7.3:+72787934 | MS.gene001914:CDS |
AGAACTGGAGGGACAGAAAG+TGG | 0.562779 | 7.3:-72787488 | None:intergenic |
CCATCTGAAGAAACAAAGAA+AGG | 0.565357 | 7.3:+72786092 | MS.gene001914:CDS |
AAACTGATTGTGGATTGTAC+TGG | 0.568236 | 7.3:+72786293 | MS.gene001914:CDS |
TCTTGGAAGATCTTCATGAC+AGG | 0.573252 | 7.3:-72788196 | None:intergenic |
TATGGAGTTTGTGAACTCAT+GGG | 0.576378 | 7.3:+72787445 | MS.gene001914:CDS |
TCCTTTCACATGGTCAAGAG+AGG | 0.581268 | 7.3:+72788140 | MS.gene001914:CDS |
AGATTAAGTATAAGCTCAGA+GGG | 0.587672 | 7.3:+72786269 | MS.gene001914:CDS |
TCTCGACCGAAGCATACTAA+AGG | 0.588752 | 7.3:+72787508 | MS.gene001914:CDS |
CAGCTGACCAAGTTCAAATG+TGG | 0.590914 | 7.3:+72787368 | MS.gene001914:intron |
ATGCTTCGGTCGAGAACTGG+AGG | 0.593369 | 7.3:-72787500 | None:intergenic |
GTGCAAATGCTCTATCTTCG+GGG | 0.597277 | 7.3:-72787540 | None:intergenic |
AATCACTTCCTTCTCCGGCA+AGG | 0.599797 | 7.3:-72788113 | None:intergenic |
CTGACCAAGTTCAAATGTGG+AGG | 0.605830 | 7.3:+72787371 | MS.gene001914:CDS |
ATACTTAATCTACCAGCAAG+AGG | 0.612226 | 7.3:-72786257 | None:intergenic |
TGCAAATGCTCTATCTTCGG+GGG | 0.613923 | 7.3:-72787539 | None:intergenic |
ATATTACAAAACCTGATCCA+AGG | 0.621561 | 7.3:+72786372 | MS.gene001914:CDS |
CATACCTGAGCAACCAAAGG+AGG | 0.626730 | 7.3:-72786449 | None:intergenic |
TACTTAATCTACCAGCAAGA+GGG | 0.630868 | 7.3:-72786256 | None:intergenic |
AAACATACCTGAGCAACCAA+AGG | 0.647608 | 7.3:-72786452 | None:intergenic |
ATGGAGTTTGTGAACTCATG+GGG | 0.648584 | 7.3:+72787446 | MS.gene001914:CDS |
TAGATTAAGTATAAGCTCAG+AGG | 0.659227 | 7.3:+72786268 | MS.gene001914:CDS |
TTCTCCCCAACCGAAATCGG+TGG | 0.671335 | 7.3:-72788068 | None:intergenic |
ATTGTGGATTGTACTGGAGA+AGG | 0.681300 | 7.3:+72786299 | MS.gene001914:CDS |
TCATGGGGAGAACTAGCAAG+AGG | 0.683206 | 7.3:+72787461 | MS.gene001914:CDS |
TGCTTCGGTCGAGAACTGGA+GGG | 0.689029 | 7.3:-72787499 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTAATTTTTTTAGTTAA+GGG | + | chr7.3:72786789-72786808 | MS.gene001914:intron | 10.0% |
!!! | TTGTTTAATTTTTTTAGTTA+AGG | + | chr7.3:72786788-72786807 | MS.gene001914:intron | 10.0% |
!! | CCAAATTATTTAAAAGTTTA+GGG | - | chr7.3:72786679-72786698 | None:intergenic | 15.0% |
!! | GAAAATTCTAATTATCAAAA+TGG | + | chr7.3:72786020-72786039 | MS.gene001914:CDS | 15.0% |
!! | TCCAAATTATTTAAAAGTTT+AGG | - | chr7.3:72786680-72786699 | None:intergenic | 15.0% |
!!! | CTATTTGAGAAATTTTAAAT+AGG | - | chr7.3:72786996-72787015 | None:intergenic | 15.0% |
!!! | CTTTTAAATAATTTGGAATT+TGG | + | chr7.3:72786683-72786702 | MS.gene001914:intron | 15.0% |
!! | AAAAATATTTCTCACATGTT+TGG | - | chr7.3:72786930-72786949 | None:intergenic | 20.0% |
!! | ATTTATGTATGATGAACATA+TGG | + | chr7.3:72787156-72787175 | MS.gene001914:intron | 20.0% |
!!! | ACACTGAACTATTATAATTT+TGG | - | chr7.3:72786883-72786902 | None:intergenic | 20.0% |
!!! | CCCTAAACTTTTAAATAATT+TGG | + | chr7.3:72786676-72786695 | MS.gene001914:intron | 20.0% |
!!! | TTTTTGAAATATAGTTGATG+CGG | + | chr7.3:72787300-72787319 | MS.gene001914:intron | 20.0% |
! | AATTGTTCAATGGAAGAAAT+TGG | + | chr7.3:72786347-72786366 | MS.gene001914:CDS | 25.0% |
! | ACATGATTCAATGTATTCAT+AGG | + | chr7.3:72786581-72786600 | MS.gene001914:intron | 25.0% |
! | CATACATAAATTCCTATGAA+GGG | - | chr7.3:72787147-72787166 | None:intergenic | 25.0% |
! | TAAGAGGTTACTTGTAATTT+GGG | + | chr7.3:72786652-72786671 | MS.gene001914:intron | 25.0% |
! | TCATACATAAATTCCTATGA+AGG | - | chr7.3:72787148-72787167 | None:intergenic | 25.0% |
! | TGTATCTCAACTAACATAAA+AGG | + | chr7.3:72787192-72787211 | MS.gene001914:intron | 25.0% |
! | TTAAGAGGTTACTTGTAATT+TGG | + | chr7.3:72786651-72786670 | MS.gene001914:intron | 25.0% |
!!! | AAAAAAGCTTTAGAAGATGA+TGG | + | chr7.3:72787671-72787690 | MS.gene001914:CDS | 25.0% |
!!! | ATCAGCTATTGATTATTTTG+AGG | + | chr7.3:72787976-72787995 | MS.gene001914:CDS | 25.0% |
!!! | CTTCAATTCTTTTAGTTTCT+CGG | - | chr7.3:72787651-72787670 | None:intergenic | 25.0% |
!!! | TTCAATTCTTTTAGTTTCTC+GGG | - | chr7.3:72787650-72787669 | None:intergenic | 25.0% |
ACTTCAGTGACAAAAACTAA+AGG | - | chr7.3:72787041-72787060 | None:intergenic | 30.0% | |
AGATTAAGTATAAGCTCAGA+GGG | + | chr7.3:72786269-72786288 | MS.gene001914:CDS | 30.0% | |
ATATTACAAAACCTGATCCA+AGG | + | chr7.3:72786372-72786391 | MS.gene001914:CDS | 30.0% | |
ATGAATCACTGTATGTTTGA+TGG | + | chr7.3:72787413-72787432 | MS.gene001914:CDS | 30.0% | |
TACCTTATATGAAGACGAAA+TGG | + | chr7.3:72787601-72787620 | MS.gene001914:CDS | 30.0% | |
TAGATTAAGTATAAGCTCAG+AGG | + | chr7.3:72786268-72786287 | MS.gene001914:CDS | 30.0% | |
TATTCAAGATGCAATCAAGA+TGG | + | chr7.3:72787934-72787953 | MS.gene001914:CDS | 30.0% | |
TCATGTTGCAACTATAATTG+TGG | - | chr7.3:72787326-72787345 | None:intergenic | 30.0% | |
TCTCAAATTATTATCCGTGT+CGG | - | chr7.3:72786556-72786575 | None:intergenic | 30.0% | |
TGAAGAATATGTTTAGCATC+AGG | - | chr7.3:72786425-72786444 | None:intergenic | 30.0% | |
TGCTTCAAAAATGAAGAGAA+GGG | + | chr7.3:72786173-72786192 | MS.gene001914:CDS | 30.0% | |
TTGAACCAAAACTTCCAAAA+GGG | + | chr7.3:72787825-72787844 | MS.gene001914:CDS | 30.0% | |
TTGCTTCAAAAATGAAGAGA+AGG | + | chr7.3:72786172-72786191 | MS.gene001914:CDS | 30.0% | |
TTGTGCAAGATTCAAGAATA+CGG | - | chr7.3:72787697-72787716 | None:intergenic | 30.0% | |
TTTGAACCAAAACTTCCAAA+AGG | + | chr7.3:72787824-72787843 | MS.gene001914:CDS | 30.0% | |
! | TTCATATAAGGTACTAGTGT+TGG | - | chr7.3:72787594-72787613 | None:intergenic | 30.0% |
!! | AAATACCCTTTTGGAAGTTT+TGG | - | chr7.3:72787833-72787852 | None:intergenic | 30.0% |
!!! | AAACTTCCAAAAGGGTATTT+TGG | + | chr7.3:72787833-72787852 | MS.gene001914:CDS | 30.0% |
!!! | AACTTCCAAAAGGGTATTTT+GGG | + | chr7.3:72787834-72787853 | MS.gene001914:CDS | 30.0% |
!!! | TGTTTTGATCAAGGTTTGAT+AGG | - | chr7.3:72786127-72786146 | None:intergenic | 30.0% |
AAAACCTCCACATTTGAACT+TGG | - | chr7.3:72787378-72787397 | None:intergenic | 35.0% | |
AACAAAATCACTTCCTTCTC+CGG | - | chr7.3:72788121-72788140 | None:intergenic | 35.0% | |
AAGTGCTTTCAGCATTTGTT+TGG | + | chr7.3:72787723-72787742 | MS.gene001914:CDS | 35.0% | |
ATACTTAATCTACCAGCAAG+AGG | - | chr7.3:72786260-72786279 | None:intergenic | 35.0% | |
CACCATTTCGTCTTCATATA+AGG | - | chr7.3:72787606-72787625 | None:intergenic | 35.0% | |
CACTGTATGTTTGATGGAAT+TGG | + | chr7.3:72787419-72787438 | MS.gene001914:CDS | 35.0% | |
CCATCTGAAGAAACAAAGAA+AGG | + | chr7.3:72786092-72786111 | MS.gene001914:CDS | 35.0% | |
CTTCAATGTCAGCAAATTCT+TGG | - | chr7.3:72787565-72787584 | None:intergenic | 35.0% | |
GAATGCTTGTGAAGTGATTA+AGG | + | chr7.3:72786202-72786221 | MS.gene001914:CDS | 35.0% | |
TACAAGTAACCTCTTAAGCA+CGG | - | chr7.3:72786648-72786667 | None:intergenic | 35.0% | |
TACTTAATCTACCAGCAAGA+GGG | - | chr7.3:72786259-72786278 | None:intergenic | 35.0% | |
TATGGAGTTTGTGAACTCAT+GGG | + | chr7.3:72787445-72787464 | MS.gene001914:CDS | 35.0% | |
TCAAGTGTATCTTTGATGAG+CGG | + | chr7.3:72786818-72786837 | MS.gene001914:intron | 35.0% | |
! | AAAAGTGTACAAGCCAAAGA+TGG | - | chr7.3:72788016-72788035 | None:intergenic | 35.0% |
! | AAACTGATTGTGGATTGTAC+TGG | + | chr7.3:72786293-72786312 | MS.gene001914:CDS | 35.0% |
! | AAATGTGGAGGTTTTTCTCT+TGG | + | chr7.3:72787383-72787402 | MS.gene001914:CDS | 35.0% |
! | CCTTTCTTTGTTTCTTCAGA+TGG | - | chr7.3:72786095-72786114 | None:intergenic | 35.0% |
! | GTACACTTTTGATCACAACT+TGG | + | chr7.3:72788026-72788045 | MS.gene001914:CDS | 35.0% |
! | GTGATTTTGTTCCTTTCACA+TGG | + | chr7.3:72788130-72788149 | MS.gene001914:CDS | 35.0% |
! | TTCTTTGTTTCTTCAGATGG+TGG | - | chr7.3:72786092-72786111 | None:intergenic | 35.0% |
! | TTTTGATCACAACTTGGTCT+AGG | + | chr7.3:72788032-72788051 | MS.gene001914:CDS | 35.0% |
!! | AGAAGCATTAATGTGCTTCT+TGG | + | chr7.3:72788163-72788182 | MS.gene001914:CDS | 35.0% |
!! | AGAAGCTTTGTTTCTTGTTC+TGG | - | chr7.3:72787779-72787798 | None:intergenic | 35.0% |
!! | TAGTTACTTGCTATGAACCA+CGG | + | chr7.3:72786513-72786532 | MS.gene001914:intron | 35.0% |
!!! | AAGCTTCTTTTTGCTGTTGA+TGG | + | chr7.3:72787791-72787810 | MS.gene001914:CDS | 35.0% |
!!! | ATTTTGAGGTAACAAGAGCT+AGG | + | chr7.3:72787990-72788009 | MS.gene001914:CDS | 35.0% |
!!! | TCACAGCAATGTTTTGATCA+AGG | - | chr7.3:72786136-72786155 | None:intergenic | 35.0% |
!!! | TCTTTTTGCTGTTGATGGAA+GGG | + | chr7.3:72787796-72787815 | MS.gene001914:CDS | 35.0% |
!!! | TTCTTTTTGCTGTTGATGGA+AGG | + | chr7.3:72787795-72787814 | MS.gene001914:CDS | 35.0% |
AAACATACCTGAGCAACCAA+AGG | - | chr7.3:72786455-72786474 | None:intergenic | 40.0% | |
AACCTTCACCGTATACGAAA+AGG | - | chr7.3:72787915-72787934 | None:intergenic | 40.0% | |
ACAAACGCTGTTTGTAAAGC+AGG | + | chr7.3:72787872-72787891 | MS.gene001914:CDS | 40.0% | |
ACCTTCACCGTATACGAAAA+GGG | - | chr7.3:72787914-72787933 | None:intergenic | 40.0% | |
ATGGAGTTTGTGAACTCATG+GGG | + | chr7.3:72787446-72787465 | MS.gene001914:CDS | 40.0% | |
CTATGGAGTTTGTGAACTCA+TGG | + | chr7.3:72787444-72787463 | MS.gene001914:CDS | 40.0% | |
GGCTGAAGCTAATTGTTCAA+TGG | + | chr7.3:72786337-72786356 | MS.gene001914:CDS | 40.0% | |
GTTCATTATTACCCTCTTGC+TGG | + | chr7.3:72786245-72786264 | MS.gene001914:CDS | 40.0% | |
GTTTGATGGAATTGGAGCTA+TGG | + | chr7.3:72787427-72787446 | MS.gene001914:CDS | 40.0% | |
TATTCTTCAGATGCCTCCTT+TGG | + | chr7.3:72786436-72786455 | MS.gene001914:CDS | 40.0% | |
TCTTGGAAGATCTTCATGAC+AGG | - | chr7.3:72788199-72788218 | None:intergenic | 40.0% | |
TGGTGCAAATGCTCTATCTT+CGG | - | chr7.3:72787545-72787564 | None:intergenic | 40.0% | |
! | ATTGTGGATTGTACTGGAGA+AGG | + | chr7.3:72786299-72786318 | MS.gene001914:CDS | 40.0% |
! | CCATTCCCAAAATACCCTTT+TGG | - | chr7.3:72787842-72787861 | None:intergenic | 40.0% |
! | GAACAAGCCCTTTTCGTATA+CGG | + | chr7.3:72787904-72787923 | MS.gene001914:CDS | 40.0% |
! | TGTATTCATAGGTGTCGTGT+CGG | + | chr7.3:72786592-72786611 | MS.gene001914:intron | 40.0% |
!!! | AGAAGGTGCTCTTTTTGTTG+AGG | + | chr7.3:72786316-72786335 | MS.gene001914:CDS | 40.0% |
!!! | CCAAAAGGGTATTTTGGGAA+TGG | + | chr7.3:72787839-72787858 | MS.gene001914:CDS | 40.0% |
AAACCTGATCCAAGGACTCT+TGG | + | chr7.3:72786380-72786399 | MS.gene001914:CDS | 45.0% | |
AACAAGAGCTAGGCCATCTT+TGG | + | chr7.3:72788000-72788019 | MS.gene001914:CDS | 45.0% | |
AAGATCTTCATGACAGGAGC+AGG | - | chr7.3:72788193-72788212 | None:intergenic | 45.0% | |
ACCAACATACCAAGAGTCCT+TGG | - | chr7.3:72786392-72786411 | None:intergenic | 45.0% | |
ATACCAAGAGTCCTTGGATC+AGG | - | chr7.3:72786386-72786405 | None:intergenic | 45.0% | |
CAGCTGACCAAGTTCAAATG+TGG | + | chr7.3:72787368-72787387 | MS.gene001914:intron | 45.0% | |
CCGAAATCGGTGGTATGAAA+CGG | - | chr7.3:72788061-72788080 | None:intergenic | 45.0% | |
CTCAGAGGGTAAACTGATTG+TGG | + | chr7.3:72786283-72786302 | MS.gene001914:CDS | 45.0% | |
CTGACCAAGTTCAAATGTGG+AGG | + | chr7.3:72787371-72787390 | MS.gene001914:CDS | 45.0% | |
GCATTTCTCAAGCCCTTCAT+AGG | + | chr7.3:72787132-72787151 | MS.gene001914:intron | 45.0% | |
GGTGCAAATGCTCTATCTTC+GGG | - | chr7.3:72787544-72787563 | None:intergenic | 45.0% | |
GTGCAAATGCTCTATCTTCG+GGG | - | chr7.3:72787543-72787562 | None:intergenic | 45.0% | |
TCCAAGGACTCTTGGTATGT+TGG | + | chr7.3:72786388-72786407 | MS.gene001914:CDS | 45.0% | |
TCCTCTCTTGACCATGTGAA+AGG | - | chr7.3:72788144-72788163 | None:intergenic | 45.0% | |
TCCTTTCACATGGTCAAGAG+AGG | + | chr7.3:72788140-72788159 | MS.gene001914:CDS | 45.0% | |
TCTCGACCGAAGCATACTAA+AGG | + | chr7.3:72787508-72787527 | MS.gene001914:CDS | 45.0% | |
TGCAAATGCTCTATCTTCGG+GGG | - | chr7.3:72787542-72787561 | None:intergenic | 45.0% | |
TGCGCACCTTTAGTATGCTT+CGG | - | chr7.3:72787517-72787536 | None:intergenic | 45.0% | |
! | TCCTCATATTTGAGGTGTCC+CGG | - | chr7.3:72786621-72786640 | None:intergenic | 45.0% |
!! | CCGTTTCATACCACCGATTT+CGG | + | chr7.3:72788058-72788077 | MS.gene001914:CDS | 45.0% |
!! | TCAGATGGTGGAACAAGTGT+TGG | - | chr7.3:72786080-72786099 | None:intergenic | 45.0% |
!! | TCATACCACCGATTTCGGTT+GGG | + | chr7.3:72788063-72788082 | MS.gene001914:CDS | 45.0% |
!! | TTCATACCACCGATTTCGGT+TGG | + | chr7.3:72788062-72788081 | MS.gene001914:CDS | 45.0% |
AATCACTTCCTTCTCCGGCA+AGG | - | chr7.3:72788116-72788135 | None:intergenic | 50.0% | |
ACGGACGCTCCTCATATTTG+AGG | - | chr7.3:72786629-72786648 | None:intergenic | 50.0% | |
AGAACTGGAGGGACAGAAAG+TGG | - | chr7.3:72787491-72787510 | None:intergenic | 50.0% | |
AGTATGCTTCGGTCGAGAAC+TGG | - | chr7.3:72787506-72787525 | None:intergenic | 50.0% | |
CATACCTGAGCAACCAAAGG+AGG | - | chr7.3:72786452-72786471 | None:intergenic | 50.0% | |
TCATGGGGAGAACTAGCAAG+AGG | + | chr7.3:72787461-72787480 | MS.gene001914:CDS | 50.0% | |
TCCGGGACACCTCAAATATG+AGG | + | chr7.3:72786617-72786636 | MS.gene001914:intron | 50.0% | |
TTGCTATGAACCACGGACAC+CGG | + | chr7.3:72786520-72786539 | MS.gene001914:intron | 50.0% | |
! | GCCCTTTTCGTATACGGTGA+AGG | + | chr7.3:72787910-72787929 | MS.gene001914:CDS | 50.0% |
!! | CATACCACCGATTTCGGTTG+GGG | + | chr7.3:72788064-72788083 | MS.gene001914:CDS | 50.0% |
ATGCTTCGGTCGAGAACTGG+AGG | - | chr7.3:72787503-72787522 | None:intergenic | 55.0% | |
CGATTTCGGTTGGGGAGAAC+CGG | + | chr7.3:72788072-72788091 | MS.gene001914:CDS | 55.0% | |
CGGTTCTCCCCAACCGAAAT+CGG | - | chr7.3:72788074-72788093 | None:intergenic | 55.0% | |
GAAACCGGTCCAGACAGAAC+CGG | - | chr7.3:72788094-72788113 | None:intergenic | 55.0% | |
GATGCCTCCTTTGGTTGCTC+AGG | + | chr7.3:72786445-72786464 | MS.gene001914:CDS | 55.0% | |
TCCTTCTCCGGCAAGGAAAC+CGG | - | chr7.3:72788109-72788128 | None:intergenic | 55.0% | |
TGCTTCGGTCGAGAACTGGA+GGG | - | chr7.3:72787502-72787521 | None:intergenic | 55.0% | |
TTCTCCCCAACCGAAATCGG+TGG | - | chr7.3:72788071-72788090 | None:intergenic | 55.0% | |
! | AGAACCGGTTCTGTCTGGAC+CGG | + | chr7.3:72788087-72788106 | MS.gene001914:CDS | 55.0% |
! | ATAGGTGTCGTGTCGGTGTC+CGG | + | chr7.3:72786599-72786618 | MS.gene001914:intron | 55.0% |
! | ACCGGTTTCCTTGCCGGAGA+AGG | + | chr7.3:72788105-72788124 | MS.gene001914:CDS | 60.0% |
! | GTCTGGACCGGTTTCCTTGC+CGG | + | chr7.3:72788099-72788118 | MS.gene001914:CDS | 60.0% |
! | TAGGTGTCGTGTCGGTGTCC+GGG | + | chr7.3:72786600-72786619 | MS.gene001914:intron | 60.0% |
! | TGGGGAGAACCGGTTCTGTC+TGG | + | chr7.3:72788082-72788101 | MS.gene001914:CDS | 60.0% |
!! | GAGGAGCGTCCGTGCTTAAG+AGG | + | chr7.3:72786636-72786655 | MS.gene001914:intron | 60.0% |
CCACGGACACCGGACACGAC+AGG | + | chr7.3:72786530-72786549 | MS.gene001914:intron | 70.0% | |
CCGGACACGACAGGCCGACA+CGG | + | chr7.3:72786539-72786558 | MS.gene001914:intron | 70.0% | |
CCTGTCGTGTCCGGTGTCCG+TGG | - | chr7.3:72786533-72786552 | None:intergenic | 70.0% | |
! | CCGTGTCGGCCTGTCGTGTC+CGG | - | chr7.3:72786542-72786561 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 72786017 | 72788234 | 72786017 | ID=MS.gene001914 |
chr7.3 | mRNA | 72786017 | 72788234 | 72786017 | ID=MS.gene001914.t1;Parent=MS.gene001914 |
chr7.3 | exon | 72786017 | 72786466 | 72786017 | ID=MS.gene001914.t1.exon1;Parent=MS.gene001914.t1 |
chr7.3 | CDS | 72786017 | 72786466 | 72786017 | ID=cds.MS.gene001914.t1;Parent=MS.gene001914.t1 |
chr7.3 | exon | 72787371 | 72788234 | 72787371 | ID=MS.gene001914.t1.exon2;Parent=MS.gene001914.t1 |
chr7.3 | CDS | 72787371 | 72788234 | 72787371 | ID=cds.MS.gene001914.t1;Parent=MS.gene001914.t1 |
Gene Sequence |
Protein sequence |