AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038905

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038905.t1 MTR_1g053315 99.140 465 3 1 1 464 1 465 0.0 947
MS.gene038905.t1 MTR_3g098980 35.333 450 263 16 18 459 6 435 8.06e-82 259
MS.gene038905.t1 MTR_7g027175 35.696 395 231 15 41 430 36 412 8.27e-71 231
MS.gene038905.t1 MTR_8g096530 34.507 426 245 15 22 434 3 407 6.69e-67 221
MS.gene038905.t1 MTR_3g112180 35.080 439 245 17 25 452 19 428 5.90e-63 211
MS.gene038905.t1 MTR_5g076700 30.698 430 283 11 31 456 20 438 3.48e-58 199
MS.gene038905.t1 MTR_4g007540 31.891 439 263 18 20 444 2 418 3.70e-57 195
MS.gene038905.t1 MTR_2g064495 31.066 441 265 18 20 445 2 418 5.32e-57 194
MS.gene038905.t1 MTR_8g075610 32.102 433 251 19 26 444 2 405 9.57e-57 194
MS.gene038905.t1 MTR_2g105330 30.839 441 266 18 20 445 2 418 1.46e-55 191
MS.gene038905.t1 MTR_1g081660 30.626 431 280 13 31 456 28 444 2.68e-54 188
MS.gene038905.t1 MTR_3g049150 30.134 448 270 16 18 442 2 429 3.76e-54 187
MS.gene038905.t1 MTR_7g114490 31.891 439 276 14 24 452 8 433 7.31e-54 188
MS.gene038905.t1 MTR_7g114470 29.885 435 288 11 26 456 19 440 8.07e-54 187
MS.gene038905.t1 MTR_7g114520 29.778 450 297 13 12 456 5 440 1.52e-53 186
MS.gene038905.t1 MTR_7g114550 32.481 391 244 13 26 412 18 392 1.21e-50 178
MS.gene038905.t1 MTR_7g114560 30.046 436 284 14 26 456 18 437 1.41e-50 178
MS.gene038905.t1 MTR_1g040175 31.701 388 250 10 26 412 17 390 1.89e-50 178
MS.gene038905.t1 MTR_1g040215 31.714 391 248 11 26 413 17 391 1.83e-49 175
MS.gene038905.t1 MTR_7g084940 29.241 448 285 14 14 452 12 436 2.38e-49 174
MS.gene038905.t1 MTR_4g055170 29.530 447 285 17 26 456 20 452 1.19e-48 173
MS.gene038905.t1 MTR_3g071320 32.391 460 258 23 18 456 5 432 1.51e-48 172
MS.gene038905.t1 MTR_3g026950 28.194 454 275 16 18 442 2 433 4.29e-48 171
MS.gene038905.t1 MTR_4g127650 29.851 469 283 17 18 461 10 457 1.47e-47 170
MS.gene038905.t1 MTR_1g040195 29.638 442 263 14 26 462 17 415 2.15e-47 169
MS.gene038905.t1 MTR_2g015430 29.224 438 277 17 33 456 16 434 5.75e-47 168
MS.gene038905.t1 MTR_4g097090 30.023 443 263 14 47 461 34 457 1.03e-46 168
MS.gene038905.t1 MTR_7g085990 28.879 464 276 15 32 459 11 456 1.48e-45 165
MS.gene038905.t1 MTR_7g085930 28.785 469 270 16 32 459 15 460 3.33e-45 164
MS.gene038905.t1 MTR_1g040320 28.409 440 260 13 26 462 17 404 1.31e-44 161
MS.gene038905.t1 MTR_7g084910 29.909 438 261 17 15 442 14 415 2.10e-41 153
MS.gene038905.t1 MTR_7g056087 26.711 453 299 16 18 457 4 436 1.08e-40 151
MS.gene038905.t1 MTR_3g465930 28.665 457 279 17 30 456 19 458 2.87e-38 145
MS.gene038905.t1 MTR_4g013050 28.172 465 248 22 19 456 5 410 3.18e-37 141
MS.gene038905.t1 MTR_1g040315 27.955 440 254 15 26 462 17 396 4.41e-37 140
MS.gene038905.t1 MTR_3g465990 27.766 461 279 19 26 456 18 454 1.15e-36 140
MS.gene038905.t1 MTR_3g465980 27.983 461 278 19 26 456 18 454 3.41e-36 139
MS.gene038905.t1 MTR_7g086000 27.406 478 300 16 16 464 2 461 9.11e-36 138
MS.gene038905.t1 MTR_3g465910 29.148 446 277 19 34 452 18 451 1.56e-34 135
MS.gene038905.t1 MTR_6g053810 28.348 448 274 21 39 456 29 459 4.93e-33 130
MS.gene038905.t1 MTR_7g114510 29.450 309 198 10 157 456 1 298 1.87e-31 123
MS.gene038905.t1 MTR_3g465950 28.736 435 262 19 26 438 18 426 5.64e-31 124
MS.gene038905.t1 MTR_3g465880 28.602 472 292 25 13 456 7 461 2.67e-30 122
MS.gene038905.t1 MTR_7g110610 27.536 414 222 14 23 423 2 350 4.77e-30 120
MS.gene038905.t1 MTR_0502s0010 30.738 244 157 6 116 356 1 235 2.83e-28 112
MS.gene038905.t1 MTR_5g026320 24.356 427 289 15 35 448 34 439 5.82e-25 107
MS.gene038905.t1 MTR_5g090830 25.185 405 251 15 40 411 29 414 6.06e-25 107
MS.gene038905.t1 MTR_5g090810 25.500 400 256 14 40 411 29 414 8.11e-25 107
MS.gene038905.t1 MTR_3g465870 30.820 305 173 14 14 300 8 292 1.55e-23 102
MS.gene038905.t1 MTR_7g114420 27.536 276 165 9 184 456 3 246 1.11e-22 97.8
MS.gene038905.t1 MTR_3g086020 24.940 417 257 17 14 417 1 374 1.57e-22 99.8
MS.gene038905.t1 MTR_5g090880 25.549 364 223 14 78 409 67 414 1.90e-22 100
MS.gene038905.t1 MTR_0042s0190 27.706 231 162 4 182 412 1 226 4.05e-22 96.7
MS.gene038905.t1 MTR_3g450710 25.916 382 241 15 58 411 46 413 3.68e-21 96.3
MS.gene038905.t1 MTR_3g450690 25.833 360 227 14 78 411 72 417 2.18e-20 94.0
MS.gene038905.t1 MTR_8g079980 24.658 438 266 20 20 432 5 403 3.72e-20 92.8
MS.gene038905.t1 MTR_4g094838 24.528 371 228 14 58 409 45 382 7.24e-19 89.0
MS.gene038905.t1 MTR_0190s0020 24.806 387 247 18 78 445 63 424 7.40e-19 89.0
MS.gene038905.t1 MTR_4g022825 23.601 411 268 18 60 445 33 422 4.60e-18 86.7
MS.gene038905.t1 MTR_4g094835 24.789 355 222 16 78 409 64 396 5.94e-18 86.3
MS.gene038905.t1 MTR_8g467580 24.832 447 270 23 14 431 1 410 1.98e-17 84.7
MS.gene038905.t1 MTR_3g049140 28.505 214 128 8 247 442 20 226 7.04e-17 80.5
MS.gene038905.t1 MTR_4g094842 23.276 348 240 14 78 409 62 398 1.38e-16 82.0
MS.gene038905.t1 MTR_3g088420 25.193 389 244 21 78 446 55 416 6.91e-16 80.1
MS.gene038905.t1 MTR_0042s0190 28.378 148 104 2 265 412 16 161 1.89e-15 75.9
MS.gene038905.t1 MTR_4g094832 24.522 314 197 16 114 409 89 380 4.48e-15 77.4
MS.gene038905.t1 MTR_8g467590 24.201 438 273 23 22 431 4 410 5.70e-15 77.0
MS.gene038905.t1 MTR_6g045553 24.688 401 238 22 51 408 44 423 9.25e-15 76.6
MS.gene038905.t1 MTR_7g114500 33.813 139 82 5 26 163 18 147 1.15e-14 71.6
MS.gene038905.t1 MTR_4g022670 25.352 355 226 17 78 409 55 393 1.44e-14 75.9
MS.gene038905.t1 MTR_2g007880 22.300 426 272 17 16 415 15 407 1.70e-14 75.9
MS.gene038905.t1 MTR_4g022720 23.944 355 225 15 78 409 55 387 2.11e-14 75.5
MS.gene038905.t1 MTR_6g015320 25.168 298 194 13 159 436 143 431 1.46e-13 72.8
MS.gene038905.t1 MTR_7g014200 23.057 386 251 15 58 408 46 420 1.60e-13 72.8
MS.gene038905.t1 MTR_7g085960 28.571 203 106 8 278 464 15 194 2.85e-13 68.9
MS.gene038905.t1 MTR_0042s0230 35.915 142 81 6 26 166 17 149 3.18e-13 67.8
MS.gene038905.t1 MTR_8g039950 40.909 110 58 4 26 135 17 119 7.18e-13 65.9
MS.gene038905.t1 MTR_3g026310 23.423 333 221 12 150 464 129 445 8.17e-13 70.5
MS.gene038905.t1 MTR_1g094790 23.179 453 269 20 18 431 3 415 8.31e-13 70.5
MS.gene038905.t1 MTR_7g114960 22.074 376 252 11 18 380 8 355 1.21e-12 70.1
MS.gene038905.t1 MTR_4g022800 22.626 358 233 15 78 409 55 394 1.25e-12 70.1
MS.gene038905.t1 MTR_7g014160 23.018 391 250 16 58 408 46 425 2.55e-12 68.9
MS.gene038905.t1 MTR_1g046770 30.000 180 96 8 278 456 36 186 4.99e-12 65.5
MS.gene038905.t1 MTR_3g049080 33.333 87 52 2 18 104 2 82 8.92e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038905.t1 AT1G03390 66.449 459 144 6 6 459 5 458 0.0 623
MS.gene038905.t1 AT5G41040 34.910 444 260 15 24 457 15 439 2.96e-73 238
MS.gene038905.t1 AT5G41040 34.521 449 255 17 24 457 31 455 4.14e-73 238
MS.gene038905.t1 AT1G27620 37.176 425 230 18 31 446 19 415 6.54e-73 237
MS.gene038905.t1 AT3G48720 32.251 431 270 14 31 458 19 430 1.82e-66 219
MS.gene038905.t1 AT5G63560 33.638 437 255 18 26 452 9 420 2.02e-64 214
MS.gene038905.t1 AT3G03480 33.864 440 261 16 26 456 27 445 1.08e-57 197
MS.gene038905.t1 AT5G17540 33.258 445 258 17 26 456 17 436 4.83e-55 190
MS.gene038905.t1 AT5G48930 31.034 435 270 15 21 444 3 418 1.62e-54 188
MS.gene038905.t1 AT1G28680 30.044 456 288 18 18 455 4 446 2.39e-52 183
MS.gene038905.t1 AT2G40230 30.805 435 264 15 19 439 3 414 1.51e-51 180
MS.gene038905.t1 AT1G28680 30.728 371 240 13 26 391 12 370 5.25e-45 162
MS.gene038905.t1 AT1G65450 28.450 471 292 18 1 454 1 443 2.28e-44 161
MS.gene038905.t1 AT2G19070 29.759 457 268 19 17 444 3 435 5.00e-44 160
MS.gene038905.t1 AT5G57840 28.478 460 273 15 21 454 3 432 1.83e-39 148
MS.gene038905.t1 AT3G62160 30.155 388 233 15 36 414 20 378 7.60e-39 146
MS.gene038905.t1 AT5G07080 26.452 465 282 13 20 456 13 445 4.66e-38 144
MS.gene038905.t1 AT2G23510 29.670 455 274 20 23 456 18 447 7.83e-37 141
MS.gene038905.t1 AT4G31910 28.571 441 274 19 42 457 32 456 2.87e-35 137
MS.gene038905.t1 AT2G25150 27.617 449 288 19 30 456 16 449 1.69e-31 126
MS.gene038905.t1 AT1G24430 23.678 435 279 18 14 432 1 398 3.19e-25 107
MS.gene038905.t1 AT3G47170 25.413 484 277 22 26 462 20 466 3.59e-25 108
MS.gene038905.t1 AT3G26040 25.917 409 261 15 18 412 3 383 2.54e-24 105
MS.gene038905.t1 AT1G65450 26.621 293 189 11 174 454 1 279 3.84e-22 96.7
MS.gene038905.t1 AT1G31490 23.192 401 275 15 18 408 6 383 7.54e-22 98.2
MS.gene038905.t1 AT5G67160 28.045 353 234 13 70 413 48 389 1.22e-21 97.4
MS.gene038905.t1 AT5G23940 24.171 422 269 18 16 408 1 400 2.78e-19 90.9
MS.gene038905.t1 AT1G78990 24.309 362 235 13 70 412 58 399 5.20e-19 89.7
MS.gene038905.t1 AT1G32910 24.599 374 226 15 70 411 52 401 3.51e-18 87.0
MS.gene038905.t1 AT3G50280 25.000 356 232 13 78 413 59 399 2.56e-17 84.3
MS.gene038905.t1 AT5G47980 23.953 430 253 15 14 412 1 387 1.75e-16 82.0
MS.gene038905.t1 AT5G16410 24.557 395 244 17 70 437 79 446 2.43e-16 81.6
MS.gene038905.t1 AT3G29590 25.187 401 237 16 86 452 69 440 2.82e-16 81.3
MS.gene038905.t1 AT5G38130 25.203 369 238 18 70 415 66 419 3.14e-16 81.3
MS.gene038905.t1 AT3G30280 24.631 406 248 19 30 410 15 387 5.07e-16 80.5
MS.gene038905.t1 AT5G23970 24.171 422 259 17 34 431 11 395 2.75e-15 78.2
MS.gene038905.t1 AT3G29670 23.487 413 266 18 58 444 45 433 6.85e-15 77.0
MS.gene038905.t1 AT3G50300 25.067 371 234 16 70 413 46 399 9.70e-15 76.6
MS.gene038905.t1 AT5G07870 24.678 466 288 22 18 447 8 446 1.26e-14 76.3
MS.gene038905.t1 AT4G15390 22.651 415 281 15 11 410 1 390 1.07e-13 73.2
MS.gene038905.t1 AT4G15390 22.651 415 281 15 11 410 1 390 1.07e-13 73.2
MS.gene038905.t1 AT5G47950 30.198 202 122 10 30 228 15 200 4.43e-13 71.2
MS.gene038905.t1 AT3G50280 26.182 275 172 11 155 413 10 269 7.09e-13 69.7
MS.gene038905.t1 AT1G24420 22.927 410 267 20 18 411 5 381 2.00e-12 69.3
MS.gene038905.t1 AT1G24420 22.927 410 267 20 18 411 5 381 2.00e-12 69.3
MS.gene038905.t1 AT5G61160 23.607 377 259 16 55 411 38 405 4.06e-12 68.6
MS.gene038905.t1 AT5G39090 23.044 473 305 18 14 459 1 441 6.56e-11 64.7

Find 0 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATAATTGTTCTGATTT+TGG - 14687:33694-33713 MS.gene038905:CDS 15.0%
!! TTTGGAAATTTGAATATCAA+TGG + 14687:32929-32948 None:intergenic 20.0%
! ACTTTGTATTGTTCTTCATT+TGG + 14687:32947-32966 None:intergenic 25.0%
! CAAACTTAACAATGAAACTT+TGG - 14687:33221-33240 MS.gene038905:CDS 25.0%
! GATTGATAAAAGTAAACTGT+CGG + 14687:32674-32693 None:intergenic 25.0%
! GTAAACTTACAATTACTCAA+TGG - 14687:33659-33678 MS.gene038905:CDS 25.0%
!! ATAATTGTTCTGATTTTGGA+TGG - 14687:33698-33717 MS.gene038905:CDS 25.0%
!! TAATTGTTCTGATTTTGGAT+GGG - 14687:33699-33718 MS.gene038905:CDS 25.0%
!! TTGATTATGTTGAAGTTGAT+AGG - 14687:33614-33633 MS.gene038905:CDS 25.0%
AAAAATCCACCATTGAAAGA+AGG - 14687:33454-33473 MS.gene038905:CDS 30.0%
AAAATCCACCATTGAAAGAA+GGG - 14687:33455-33474 MS.gene038905:CDS 30.0%
AACAGCAAAAACAGGAAAAT+TGG - 14687:33096-33115 MS.gene038905:CDS 30.0%
AACCTTAATTCGTAATCTTG+CGG + 14687:33403-33422 None:intergenic 30.0%
AAGTACTTCTTTCCAAAAAC+CGG - 14687:32703-32722 MS.gene038905:CDS 30.0%
AGTTGATCTCAAATATTCCT+CGG + 14687:33593-33612 None:intergenic 30.0%
GAATATTCAAAGGATTGAGA+GGG + 14687:32535-32554 None:intergenic 30.0%
GGTAAAAATACACAAACTTG+AGG + 14687:33766-33785 None:intergenic 30.0%
TGAAGAACAATACAAAGTGT+TGG - 14687:32949-32968 MS.gene038905:CDS 30.0%
! AATTGTTCTGATTTTGGATG+GGG - 14687:33700-33719 MS.gene038905:CDS 30.0%
!! AACATAGCTTTATCTGAACT+AGG - 14687:32872-32891 MS.gene038905:CDS 30.0%
!! GTTTGTGTATTTTTACCTGA+AGG - 14687:33769-33788 MS.gene038905:CDS 30.0%
!!! GGTAAACTGGAAGTATTTTT+TGG - 14687:32809-32828 MS.gene038905:CDS 30.0%
!!! TTTTTTGGAGAAGAAGAACA+AGG - 14687:32824-32843 MS.gene038905:CDS 30.0%
AAAATCTCTCTGTTCCAACA+AGG + 14687:33136-33155 None:intergenic 35.0%
AAGGTTTCTGATCTTGTGAA+TGG - 14687:33517-33536 MS.gene038905:CDS 35.0%
AATACACAAACTTGAGGTGT+AGG + 14687:33760-33779 None:intergenic 35.0%
AATATCAATGGTTCCCAAGA+TGG + 14687:32917-32936 None:intergenic 35.0%
AGAAGTGAAATTTCCACACA+TGG - 14687:33174-33193 MS.gene038905:CDS 35.0%
AGGTTAAGAGAGACGAAAAA+CGG - 14687:32788-32807 MS.gene038905:CDS 35.0%
ATGGTGACTGGAATATTCAA+AGG + 14687:32545-32564 None:intergenic 35.0%
ATGTGTGGAAATTTCACTTC+TGG + 14687:33175-33194 None:intergenic 35.0%
CAACACTGAATCAATAAGCA+AGG + 14687:33872-33891 None:intergenic 35.0%
CATCACAGATACAATGACAA+AGG + 14687:33039-33058 None:intergenic 35.0%
CCATAAAACCCTTCTTTCAA+TGG + 14687:33466-33485 None:intergenic 35.0%
CTTTGTCATTGTATCTGTGA+TGG - 14687:33037-33056 MS.gene038905:CDS 35.0%
GAAAGATATAAAGAGTCACC+TGG + 14687:32614-32633 None:intergenic 35.0%
GAGTTCATGAGAATTGATGA+AGG - 14687:33196-33215 MS.gene038905:CDS 35.0%
GGAATATTCAAAGGATTGAG+AGG + 14687:32536-32555 None:intergenic 35.0%
GGTGTAGGTGTTAAATCAAT+AGG + 14687:33745-33764 None:intergenic 35.0%
TAAAACCCTTCTTTCAATGG+TGG + 14687:33463-33482 None:intergenic 35.0%
TATTGCTTGCACAACAAGTA+AGG - 14687:33498-33517 MS.gene038905:CDS 35.0%
TCAATAGGACCAGCATAAAT+TGG + 14687:33730-33749 None:intergenic 35.0%
TGCACATATTTGGAGATCAT+GGG - 14687:33357-33376 MS.gene038905:CDS 35.0%
TTGCACTACATTTGATGCAA+TGG - 14687:33333-33352 MS.gene038905:CDS 35.0%
! AACGGAGAATGTGTTGATAA+TGG + 14687:32564-32583 None:intergenic 35.0%
! AATAGGCTTTGATGGAGTAA+CGG + 14687:32582-32601 None:intergenic 35.0%
! ATTACCAGAGACTACTCTTT+TGG - 14687:33543-33562 MS.gene038905:CDS 35.0%
! CAGGTAACAATTTTCACATG+TGG - 14687:32992-33011 MS.gene038905:CDS 35.0%
! CATTGTATCTGTGATGGAAT+GGG - 14687:33043-33062 MS.gene038905:CDS 35.0%
! CCATTGAAAGAAGGGTTTTA+TGG - 14687:33463-33482 MS.gene038905:CDS 35.0%
! GTAACAATTTTCACATGTGG+TGG - 14687:32995-33014 MS.gene038905:CDS 35.0%
! TCATTGTATCTGTGATGGAA+TGG - 14687:33042-33061 MS.gene038905:CDS 35.0%
!! AATGTGTTGATAATGGTGAC+TGG + 14687:32557-32576 None:intergenic 35.0%
!! AGAAGGGTTTTATGGTAATG+TGG - 14687:33471-33490 MS.gene038905:CDS 35.0%
!! GTATTTTTACCTGAAGGAGA+AGG - 14687:33775-33794 MS.gene038905:CDS 35.0%
AGAGACGAAAAACGGTAAAC+TGG - 14687:32796-32815 MS.gene038905:CDS 40.0%
AGCCGCAAGATTACGAATTA+AGG - 14687:33398-33417 MS.gene038905:CDS 40.0%
ATGCAATGGCTGCACATATT+TGG - 14687:33347-33366 MS.gene038905:CDS 40.0%
ATGCGATAACACTTCTGAAC+AGG + 14687:33256-33275 None:intergenic 40.0%
ATTCTCATGAACTCCATGTG+TGG + 14687:33190-33209 None:intergenic 40.0%
CTGCACATATTTGGAGATCA+TGG - 14687:33356-33375 MS.gene038905:CDS 40.0%
GTTACCTGAGCTATAACAAG+TGG + 14687:32980-32999 None:intergenic 40.0%
GTTGAGCAAGTGATTTCAAG+TGG + 14687:33297-33316 None:intergenic 40.0%
TCAAACCTCGATGATGTGAT+TGG - 14687:32632-32651 MS.gene038905:CDS 40.0%
TGTGGAAATTTCACTTCTGG+TGG + 14687:33172-33191 None:intergenic 40.0%
TTACAGAACCTGAACCTTGT+TGG - 14687:33119-33138 MS.gene038905:CDS 40.0%
! AACTTGTTCGCAGCAAATTC+AGG + 14687:33841-33860 None:intergenic 40.0%
! AATGACAAAGGCGTAAACCA+AGG + 14687:33027-33046 None:intergenic 40.0%
! AATGGTTCCCAAGATGGATT+TGG + 14687:32911-32930 None:intergenic 40.0%
! TATGCAGTTTCTAGGAGCAT+GGG - 14687:33069-33088 MS.gene038905:CDS 40.0%
! TTGACAGGAATAGGCTTTGA+TGG + 14687:32590-32609 None:intergenic 40.0%
!! AATGCCACTTGTTATAGCTC+AGG - 14687:32973-32992 MS.gene038905:CDS 40.0%
!! AGAAGAACAAGGAGCGTTAA+TGG - 14687:32835-32854 MS.gene038905:CDS 40.0%
AAGCCTATTCCTGTCAAACC+AGG - 14687:32593-32612 MS.gene038905:CDS 45.0%
AGGCCAAAGCAACTTGAGTT+TGG - 14687:33634-33653 MS.gene038905:CDS 45.0%
ATGGGAGCTATGCAGTTTCT+AGG - 14687:33061-33080 MS.gene038905:CDS 45.0%
CCAAAGCAACTTGAGTTTGG+TGG - 14687:33637-33656 MS.gene038905:CDS 45.0%
CGAACCAAAAGAGTAGTCTC+TGG + 14687:33550-33569 None:intergenic 45.0%
CTAGAATCACCTTCTCCTTC+AGG + 14687:33787-33806 None:intergenic 45.0%
CTCTTAACCTTCCAGAGAGA+GGG + 14687:32778-32797 None:intergenic 45.0%
CTTCCAGAGAGAGGGTAATA+GGG + 14687:32770-32789 None:intergenic 45.0%
GAAGGAGAAGGTGATTCTAG+TGG - 14687:33787-33806 MS.gene038905:CDS 45.0%
TCTCTGTTCCAACAAGGTTC+AGG + 14687:33130-33149 None:intergenic 45.0%
TCTCTTAACCTTCCAGAGAG+AGG + 14687:32779-32798 None:intergenic 45.0%
TGCTGCTCCAAATCCATCTT+GGG - 14687:32901-32920 MS.gene038905:CDS 45.0%
TGGGGTAAGCCAATTTATGC+TGG - 14687:33718-33737 MS.gene038905:CDS 45.0%
TTCTTTCCAAAAACCGGTCG+CGG - 14687:32709-32728 MS.gene038905:CDS 45.0%
TTGCTGCTCCAAATCCATCT+TGG - 14687:32900-32919 MS.gene038905:CDS 45.0%
! AAAGAGTCACCTGGTTTGAC+AGG + 14687:32605-32624 None:intergenic 45.0%
! CCACCAAACTCAAGTTGCTT+TGG + 14687:33640-33659 None:intergenic 45.0%
! CTATGCAGTTTCTAGGAGCA+TGG - 14687:33068-33087 MS.gene038905:CDS 45.0%
! TCACCTGGTTTGACAGGAAT+AGG + 14687:32599-32618 None:intergenic 45.0%
!! ACATGTGGTGGATTTAGCCT+TGG - 14687:33007-33026 MS.gene038905:CDS 45.0%
AAACCGGTCGCGGAAATACT+TGG - 14687:32719-32738 MS.gene038905:CDS 50.0%
AGAGGGAGTTCTTGAACCCA+TGG + 14687:32518-32537 None:intergenic 50.0%
AGCTCGACAAAGTGTAACCG+AGG - 14687:33573-33592 MS.gene038905:CDS 50.0%
CCAAAACATCAGCTAGAGCG+CGG + 14687:32745-32764 None:intergenic 50.0%
CCTATTACCCTCTCTCTGGA+AGG - 14687:32768-32787 MS.gene038905:CDS 50.0%
CCTTCCAGAGAGAGGGTAAT+AGG + 14687:32771-32790 None:intergenic 50.0%
GCTCAACCATTTGACTCTGC+TGG - 14687:33310-33329 MS.gene038905:CDS 50.0%
GGAGAAGGTGATTCTAGTGG+TGG - 14687:33790-33809 MS.gene038905:CDS 50.0%
GTGCAACCAGCAGAGTCAAA+TGG + 14687:33319-33338 None:intergenic 50.0%
GTTCCCTATTACCCTCTCTC+TGG - 14687:32764-32783 MS.gene038905:CDS 50.0%
TGGGCTGCAACAGCAAAAAC+AGG - 14687:33088-33107 MS.gene038905:CDS 50.0%
! TTCACTTCTGGTGGATCACG+TGG + 14687:33163-33182 None:intergenic 50.0%
!! GTATTTCCGCGACCGGTTTT+TGG + 14687:32718-32737 None:intergenic 50.0%
GCGCTCCAATCACATCATCG+AGG + 14687:32640-32659 None:intergenic 55.0%
GGGAGTTCTTGAACCCATGG+AGG + 14687:32515-32534 None:intergenic 55.0%
! CCGCGCTCTAGCTGATGTTT+TGG - 14687:32742-32761 MS.gene038905:CDS 55.0%
CGGCCAAGTATTTCCGCGAC+CGG + 14687:32725-32744 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
14687 gene 32506 33900 32506 ID=MS.gene038905
14687 mRNA 32506 33900 32506 ID=MS.gene038905.t1;Parent=MS.gene038905
14687 exon 32506 33900 32506 ID=MS.gene038905.t1.exon1;Parent=MS.gene038905.t1
14687 CDS 32506 33900 32506 ID=cds.MS.gene038905.t1;Parent=MS.gene038905.t1
Gene Sequence

>MS.gene038905

ATGGCTCCTCCATGGGTTCAAGAACTCCCTCTCAATCCTTTGAATATTCCAGTCACCATTATCAACACATTCTCCGTTACTCCATCAAAGCCTATTCCTGTCAAACCAGGTGACTCTTTATATCTTTCAAACCTCGATGATGTGATTGGAGCGCGCGTCTTCACACCGACAGTTTACTTTTATCAATCAGACAATTCAAGTACTTCTTTCCAAAAACCGGTCGCGGAAATACTTGGCCGCGCTCTAGCTGATGTTTTGGTTCCCTATTACCCTCTCTCTGGAAGGTTAAGAGAGACGAAAAACGGTAAACTGGAAGTATTTTTTGGAGAAGAAGAACAAGGAGCGTTAATGGTTGAAGCAAGATCAAACATAGCTTTATCTGAACTAGGTGATTTTGCTGCTCCAAATCCATCTTGGGAACCATTGATATTCAAATTTCCAAATGAAGAACAATACAAAGTGTTGGAAATGCCACTTGTTATAGCTCAGGTAACAATTTTCACATGTGGTGGATTTAGCCTTGGTTTACGCCTTTGTCATTGTATCTGTGATGGAATGGGAGCTATGCAGTTTCTAGGAGCATGGGCTGCAACAGCAAAAACAGGAAAATTGGTTACAGAACCTGAACCTTGTTGGAACAGAGAGATTTTCAAGCCACGTGATCCACCAGAAGTGAAATTTCCACACATGGAGTTCATGAGAATTGATGAAGGATCAAACTTAACAATGAAACTTTGGAAAACAAAGCCTGTTCAGAAGTGTTATCGCATAAGACGCGAGTTTCAAAACCACTTGAAATCACTTGCTCAACCATTTGACTCTGCTGGTTGCACTACATTTGATGCAATGGCTGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTTAAGCCGCAAGATTACGAATTAAGGTTAACATTTTCAGTTAATGCTAGACAGAAGCTTAAAAATCCACCATTGAAAGAAGGGTTTTATGGTAATGTGGTTTGTATTGCTTGCACAACAAGTAAGGTTTCTGATCTTGTGAATGGAAAATTACCAGAGACTACTCTTTTGGTTCGTGAAGCTCGACAAAGTGTAACCGAGGAATATTTGAGATCAACTGTTGATTATGTTGAAGTTGATAGGCCAAAGCAACTTGAGTTTGGTGGTAAACTTACAATTACTCAATGGACAAGATTTTCTATTTATAATTGTTCTGATTTTGGATGGGGTAAGCCAATTTATGCTGGTCCTATTGATTTAACACCTACACCTCAAGTTTGTGTATTTTTACCTGAAGGAGAAGGTGATTCTAGTGGTGGTTCTATGATTGTTTGCATTTGCTTGCCTGAATTTGCTGCGAACAAGTTTACACAAGCCTTGCTTATTGATTCAGTGTTGTTGACATAG
Protein sequence

>MS.gene038905.t1

MAPPWVQELPLNPLNIPVTIINTFSVTPSKPIPVKPGDSLYLSNLDDVIGARVFTPTVYFYQSDNSSTSFQKPVAEILGRALADVLVPYYPLSGRLRETKNGKLEVFFGEEEQGALMVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTIFTCGGFSLGLRLCHCICDGMGAMQFLGAWAATAKTGKLVTEPEPCWNREIFKPRDPPEVKFPHMEFMRIDEGSNLTMKLWKTKPVQKCYRIRREFQNHLKSLAQPFDSAGCTTFDAMAAHIWRSWVKALDVKPQDYELRLTFSVNARQKLKNPPLKEGFYGNVVCIACTTSKVSDLVNGKLPETTLLVREARQSVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYNCSDFGWGKPIYAGPIDLTPTPQVCVFLPEGEGDSSGGSMIVCICLPEFAANKFTQALLIDSVLLT