Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002263.t1 | XP_003593314.1 | 97.5 | 1258 | 28 | 2 | 1 | 1255 | 1 | 1258 | 0.00E+00 | 2216 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002263.t1 | O60094 | 20.3 | 711 | 465 | 20 | 153 | 847 | 38 | 662 | 1.5e-21 | 107.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002263.t1 | G7ISA4 | 97.5 | 1258 | 28 | 2 | 1 | 1255 | 1 | 1258 | 0.0e+00 | 2216.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene04418 | MS.gene002263 | PPI |
MS.gene05640 | MS.gene002263 | PPI |
MS.gene08109 | MS.gene002263 | PPI |
MS.gene04079 | MS.gene002263 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002263.t1 | MTR_2g010110 | 97.536 | 1258 | 28 | 2 | 1 | 1255 | 1 | 1258 | 0.0 | 2501 |
MS.gene002263.t1 | MTR_2g086320 | 66.964 | 112 | 18 | 2 | 533 | 644 | 1 | 93 | 9.67e-36 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002263.t1 | AT5G64420 | 57.714 | 1251 | 498 | 8 | 33 | 1254 | 57 | 1305 | 0.0 | 1298 |
Find 256 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCCGCATCCTTTCATTAT+TGG | 0.108234 | 2.3:-73111231 | MS.gene002263:CDS |
TGCTGTATTTGGCTTTATTT+TGG | 0.128918 | 2.3:-73110519 | MS.gene002263:CDS |
TCTACAGACAGTTCCATTTA+TGG | 0.143885 | 2.3:-73114904 | MS.gene002263:CDS |
GCATTTGATGTGGGAGATTT+TGG | 0.150780 | 2.3:+73113843 | None:intergenic |
AAATCCAAAAGGAAGAATTT+TGG | 0.171453 | 2.3:+73110699 | None:intergenic |
AAAGGAAATAATGAAGTTTA+TGG | 0.180478 | 2.3:-73113940 | MS.gene002263:CDS |
TAAACTCGTAGTAGATTTAT+TGG | 0.186853 | 2.3:-73115747 | MS.gene002263:CDS |
ATAAATCTACTACGAGTTTA+AGG | 0.201598 | 2.3:+73115750 | None:intergenic |
TGGTAGTAGTTTGCCATAAA+TGG | 0.204218 | 2.3:+73114891 | None:intergenic |
GTTTCATATTGGTGTGTTTA+AGG | 0.207989 | 2.3:-73116963 | MS.gene002263:CDS |
CCCGCATCTGGATGTCTTGC+AGG | 0.208201 | 2.3:+73111551 | None:intergenic |
TTGCCCAAAATTCTTCCTTT+TGG | 0.208711 | 2.3:-73110703 | MS.gene002263:CDS |
TTGAGTTGGACGAGAAATTT+AGG | 0.244796 | 2.3:-73113869 | MS.gene002263:CDS |
CGGAGCTGGAAGTTCGGATT+TGG | 0.249234 | 2.3:+73117048 | None:intergenic |
TGCCTTGAACCGATATAAAA+TGG | 0.254681 | 2.3:-73110735 | MS.gene002263:CDS |
AATGAAGTTTATGGCTGTTC+AGG | 0.254880 | 2.3:-73113931 | MS.gene002263:CDS |
ATTCCTTTGTTTGAAGAAAC+TGG | 0.256200 | 2.3:-73110174 | MS.gene002263:CDS |
TGGATTGGCCATGCTGTATT+TGG | 0.268961 | 2.3:-73110530 | MS.gene002263:CDS |
TTCCTTCAGTTTCTCTCTTC+CGG | 0.279221 | 2.3:-73113674 | MS.gene002263:CDS |
GAGATTCAAGTGTCGATAAT+TGG | 0.285987 | 2.3:+73110837 | None:intergenic |
ACAGACGAAAATTCTGAAAT+AGG | 0.294275 | 2.3:-73114092 | MS.gene002263:CDS |
TCCAATTGTGGAACAGTATT+GGG | 0.296061 | 2.3:+73114647 | None:intergenic |
CGTTGAGCCGCCTAATGATC+TGG | 0.304974 | 2.3:-73113736 | MS.gene002263:CDS |
TTGGTAGAGCTGAACGGATT+TGG | 0.321158 | 2.3:+73114871 | None:intergenic |
AACTAGCATCAAAACCATTT+AGG | 0.324731 | 2.3:-73110796 | MS.gene002263:CDS |
TCCTGAGGCTCAAGCTGCTT+TGG | 0.324924 | 2.3:-73110216 | MS.gene002263:CDS |
AGCTGATTTCTTTGAGGGAT+TGG | 0.334746 | 2.3:+73110757 | None:intergenic |
TTCTTAAACAATTGTCAGAT+TGG | 0.335380 | 2.3:-73114331 | MS.gene002263:CDS |
TTCGGATTTGGATTTGGATT+TGG | 0.336489 | 2.3:+73117060 | None:intergenic |
TCTGAATCATCAGAATCTTC+AGG | 0.341427 | 2.3:+73111371 | None:intergenic |
CTGGTGCTATCGACAAAATC+AGG | 0.343136 | 2.3:-73115784 | MS.gene002263:CDS |
GCTCTTGCAGTGTGCGCGAC+AGG | 0.343666 | 2.3:-73115834 | MS.gene002263:intron |
CCTATTCGCATATGGTGCTT+TGG | 0.344339 | 2.3:-73115586 | MS.gene002263:CDS |
GCTCTTCTTGCCTGTTTGCT+TGG | 0.345913 | 2.3:+73110320 | None:intergenic |
TCTTACTGTGTACTCACATT+TGG | 0.348622 | 2.3:-73110978 | MS.gene002263:CDS |
TCATCTGCACTTCCCGCATC+TGG | 0.348902 | 2.3:+73111539 | None:intergenic |
CTTCCTGAGTAATTGTTTGA+AGG | 0.360884 | 2.3:-73114824 | MS.gene002263:intron |
ACCCAATACTGTTCCACAAT+TGG | 0.365522 | 2.3:-73114648 | MS.gene002263:CDS |
AAAGAATCTCCTAGGACTAA+TGG | 0.365603 | 2.3:-73114056 | MS.gene002263:CDS |
TGGAAGTTCGGATTTGGATT+TGG | 0.366954 | 2.3:+73117054 | None:intergenic |
CGGCGGTGAATGAATCGATT+AGG | 0.368057 | 2.3:-73116934 | MS.gene002263:CDS |
GAAGGACTTGTAAGAGCAAC+TGG | 0.370111 | 2.3:+73112706 | None:intergenic |
CCGACAAATTCTTTGATGTA+TGG | 0.378528 | 2.3:+73115516 | None:intergenic |
GACTCGCCGAAAGTCTGATT+TGG | 0.381818 | 2.3:+73110481 | None:intergenic |
TGCAATGATATCACCGATGA+TGG | 0.384725 | 2.3:-73111614 | MS.gene002263:CDS |
ATCATCTTCTCCAGGGGACT+CGG | 0.388710 | 2.3:+73112605 | None:intergenic |
AGCTCCGGATTCGGCTATAT+TGG | 0.391499 | 2.3:-73117032 | MS.gene002263:CDS |
CTCTTGCAGTGTGCGCGACA+GGG | 0.392256 | 2.3:-73115833 | MS.gene002263:intron |
TCCAAAGCAGCTTGAGCCTC+AGG | 0.392723 | 2.3:+73110215 | None:intergenic |
AAGAATCTCCTAGGACTAAT+GGG | 0.392912 | 2.3:-73114055 | MS.gene002263:CDS |
GGAAGCAAAAGATTGTCTTC+TGG | 0.393079 | 2.3:-73115613 | MS.gene002263:CDS |
ACTTTGTTTGACAGAACAAC+TGG | 0.395748 | 2.3:+73114419 | None:intergenic |
TTCCAATTGTGGAACAGTAT+TGG | 0.400668 | 2.3:+73114646 | None:intergenic |
GTTGTTGGCAAATGCTCATA+AGG | 0.401304 | 2.3:-73113787 | MS.gene002263:CDS |
AGCCTCGTGTTCACAGTGTT+TGG | 0.402114 | 2.3:-73114694 | MS.gene002263:CDS |
GAAGCAAAAGATTGTCTTCT+GGG | 0.403903 | 2.3:-73115612 | MS.gene002263:CDS |
TCTTAAACAATTGTCAGATT+GGG | 0.407131 | 2.3:-73114330 | MS.gene002263:CDS |
TTTATATAGCCATGTGTTGT+TGG | 0.407224 | 2.3:+73114367 | None:intergenic |
CAAGGCAGCTGATTTCTTTG+AGG | 0.408677 | 2.3:+73110751 | None:intergenic |
ATAAGAATATTTATCAAAAC+AGG | 0.410894 | 2.3:+73114671 | None:intergenic |
TAGTGGTGGTGATTCGTTGC+CGG | 0.412588 | 2.3:-73116987 | MS.gene002263:CDS |
TACTTATCTCCCTTGCAAAT+AGG | 0.412858 | 2.3:-73115491 | MS.gene002263:CDS |
GCGAGTCGAAGCACTTGAAT+TGG | 0.414700 | 2.3:-73110465 | MS.gene002263:CDS |
AAAGCAAGGAATAGAGCATC+AGG | 0.414753 | 2.3:+73114946 | None:intergenic |
AATTGGACTTCATCACCCTT+TGG | 0.414789 | 2.3:+73110854 | None:intergenic |
GAGAAGATGATGCAGAGGTT+GGG | 0.415139 | 2.3:-73112593 | MS.gene002263:CDS |
GGCGGTGAATGAATCGATTA+GGG | 0.415824 | 2.3:-73116933 | MS.gene002263:CDS |
GACAAATATGCCAAGCAAAC+AGG | 0.416463 | 2.3:-73110330 | MS.gene002263:CDS |
GGGAGAGGGGCCACGTCCTT+CGG | 0.417055 | 2.3:-73113766 | MS.gene002263:CDS |
GATTCTGATGATTCAGATAG+TGG | 0.417094 | 2.3:-73111365 | MS.gene002263:CDS |
AAGTACGAACCCAGATCATT+AGG | 0.417639 | 2.3:+73113726 | None:intergenic |
ACCTCTGCATCATCTTCTCC+AGG | 0.418263 | 2.3:+73112597 | None:intergenic |
GCAGCTCAGTCAGCGTATAT+CGG | 0.418294 | 2.3:-73110915 | MS.gene002263:CDS |
CTGGGCCGCCTATTCGCATA+TGG | 0.421484 | 2.3:-73115594 | MS.gene002263:CDS |
GGAAGTTCAGAAGGCTTATG+AGG | 0.421556 | 2.3:-73116876 | MS.gene002263:CDS |
TGGGTTATAGAATCTCTTCC+TGG | 0.424403 | 2.3:-73114011 | MS.gene002263:CDS |
AAGGCAGCTGATTTCTTTGA+GGG | 0.429594 | 2.3:+73110752 | None:intergenic |
CCAAAGCACCATATGCGAAT+AGG | 0.434100 | 2.3:+73115586 | None:intergenic |
TCGTTGCCGGAGTTTCATAT+TGG | 0.435279 | 2.3:-73116974 | MS.gene002263:CDS |
ATTGTTGGTTTGGTTGAAGA+TGG | 0.436653 | 2.3:+73117130 | None:intergenic |
ATCGACACTTGAATCTCTCT+TGG | 0.440706 | 2.3:-73110831 | MS.gene002263:CDS |
CCAAAGCATAAATACCTCTC+TGG | 0.441278 | 2.3:+73113590 | None:intergenic |
CAAGCTGAGACTGGTGAAAC+AGG | 0.441508 | 2.3:-73111461 | MS.gene002263:CDS |
TGAACAGCTGCAGTTGTTGT+TGG | 0.442984 | 2.3:-73113802 | MS.gene002263:CDS |
AAATTTGATGAACCTGTTTG+TGG | 0.444596 | 2.3:-73114159 | MS.gene002263:CDS |
AAAGAGAAGAAAAGTCAGTC+TGG | 0.445191 | 2.3:-73111290 | MS.gene002263:CDS |
TGATTCGCTAATGCTTCAAC+AGG | 0.446357 | 2.3:+73115027 | None:intergenic |
GGAAGTAACTTCATCAATGA+AGG | 0.447215 | 2.3:-73115726 | MS.gene002263:CDS |
GTAGTTGAGGCAGATGAAAC+TGG | 0.447442 | 2.3:-73111404 | MS.gene002263:CDS |
CATTATCTTCATCCACAAAC+AGG | 0.448918 | 2.3:+73114147 | None:intergenic |
GGTCTGTTCACTGCATCTCT+TGG | 0.449608 | 2.3:-73113909 | MS.gene002263:CDS |
TCAACTAGCGGCGGCGGTAG+TGG | 0.449628 | 2.3:-73117004 | MS.gene002263:CDS |
TGGGGATGCACCTGAATTGA+TGG | 0.458302 | 2.3:-73112574 | MS.gene002263:CDS |
ACAAGAACATCCATCAATTC+AGG | 0.458388 | 2.3:+73112564 | None:intergenic |
CAGCTCAGTCAGCGTATATC+GGG | 0.458624 | 2.3:-73110914 | MS.gene002263:CDS |
GTTGTTTGACTCTGATCTGA+AGG | 0.458674 | 2.3:+73114113 | None:intergenic |
TGAAGTGACTTCATTTGAGT+TGG | 0.462021 | 2.3:-73113883 | MS.gene002263:CDS |
TATGGTGCTTTGGCTCGATC+AGG | 0.468033 | 2.3:-73115576 | MS.gene002263:CDS |
GAGTTTGAACAGCAAAAGTT+GGG | 0.470843 | 2.3:+73111250 | None:intergenic |
CGAGAAGTTACGAGTTCAAA+AGG | 0.471599 | 2.3:-73113958 | MS.gene002263:CDS |
GGAGTTTGAACAGCAAAAGT+TGG | 0.474644 | 2.3:+73111249 | None:intergenic |
ATTCTTCCCTTCACCACTCT+CGG | 0.476182 | 2.3:+73110415 | None:intergenic |
CAAAAGAGTTGCTGTTATAG+TGG | 0.477088 | 2.3:-73114291 | MS.gene002263:CDS |
TATAAAATTATTGAGACGGC+AGG | 0.477862 | 2.3:+73115450 | None:intergenic |
TGGATGATGATGCAATGTTC+AGG | 0.478667 | 2.3:-73111340 | MS.gene002263:CDS |
TTGAACAATCCTCTGCAGTT+CGG | 0.481594 | 2.3:+73110643 | None:intergenic |
GGCAAATGCTCATAAGGGAG+AGG | 0.486456 | 2.3:-73113781 | MS.gene002263:CDS |
GGTCAAGGGATGGAGATTGA+TGG | 0.487783 | 2.3:-73116851 | MS.gene002263:CDS |
TTTGAATCTGCTGCAGAAGT+TGG | 0.488189 | 2.3:-73114973 | MS.gene002263:CDS |
CATCGAAAGCTAAGTGCTTA+CGG | 0.488573 | 2.3:+73114483 | None:intergenic |
TATGCGGTCTGCTATTGATC+AGG | 0.490512 | 2.3:-73112502 | MS.gene002263:intron |
TCCCAATGGGTAGCAAGAAA+AGG | 0.490679 | 2.3:-73117228 | None:intergenic |
CGAACTTCCAGCTCCGGATT+CGG | 0.490726 | 2.3:-73117041 | MS.gene002263:CDS |
AACACATGGCTATATAAAGT+TGG | 0.490755 | 2.3:-73114362 | MS.gene002263:CDS |
CGAATCCGGAGCTGGAAGTT+CGG | 0.490766 | 2.3:+73117042 | None:intergenic |
ATGAAGTTTATGGCTGTTCA+GGG | 0.491134 | 2.3:-73113930 | MS.gene002263:CDS |
AACTTCATCAATGAAGGGTC+AGG | 0.494749 | 2.3:-73115720 | MS.gene002263:intron |
TAAACAATTGTCAGATTGGG+TGG | 0.495021 | 2.3:-73114327 | MS.gene002263:CDS |
CAAATCCGAACTTCCAGCTC+CGG | 0.497690 | 2.3:-73117047 | MS.gene002263:CDS |
GGAGAAGATGATGCAGAGGT+TGG | 0.500648 | 2.3:-73112594 | MS.gene002263:CDS |
CCATACATCAAAGAATTTGT+CGG | 0.502813 | 2.3:-73115516 | MS.gene002263:CDS |
TCACCAACTCTTTCATAGCA+TGG | 0.505036 | 2.3:+73110351 | None:intergenic |
CTGAATCATCAGAATCTTCA+GGG | 0.505240 | 2.3:+73111372 | None:intergenic |
TCAAACCACTTGTCCAGTCC+AGG | 0.506758 | 2.3:+73114991 | None:intergenic |
TGGTGTGTTTAAGGATTTAG+CGG | 0.508774 | 2.3:-73116954 | MS.gene002263:CDS |
TGTTATTGAAGCTCCTGGAC+TGG | 0.511530 | 2.3:-73115004 | MS.gene002263:CDS |
TGAGGCAGATGAAACTGGTC+AGG | 0.511569 | 2.3:-73111399 | MS.gene002263:CDS |
AACTGAAGGAATATTGCATA+AGG | 0.511631 | 2.3:+73113686 | None:intergenic |
CACCAACTCTTTCATAGCAT+GGG | 0.511792 | 2.3:+73110352 | None:intergenic |
TCTGATATTCCCGAGTCCCC+TGG | 0.513649 | 2.3:-73112615 | MS.gene002263:CDS |
TCATCTTCTCCAGGGGACTC+GGG | 0.515831 | 2.3:+73112606 | None:intergenic |
TCAGAATTCCCATTAGTCCT+AGG | 0.515926 | 2.3:+73114047 | None:intergenic |
CAGGAAGACTTATCCATGAA+TGG | 0.517068 | 2.3:-73115557 | MS.gene002263:CDS |
TTTAAAAGAAGACCATGGAT+TGG | 0.519670 | 2.3:-73110545 | MS.gene002263:CDS |
GAATGAATCGATTAGGGAAG+CGG | 0.520234 | 2.3:-73116927 | MS.gene002263:CDS |
AAGGCTTATGAGGGTGGTCA+AGG | 0.520680 | 2.3:-73116866 | MS.gene002263:CDS |
AATCATGTTATTGAAGCTCC+TGG | 0.521109 | 2.3:-73115009 | MS.gene002263:CDS |
TTTCCAGTTTCTTCAAACAA+AGG | 0.525530 | 2.3:+73110171 | None:intergenic |
TCTACCAATATAGCCGAATC+CGG | 0.527525 | 2.3:+73117028 | None:intergenic |
TTCAAGAATTTCAAAATACC+AGG | 0.527894 | 2.3:+73113993 | None:intergenic |
GTGAAACAGGTGAGAGCGAT+GGG | 0.528108 | 2.3:-73111448 | MS.gene002263:CDS |
TCACTAACTTCAGCAGTGTG+TGG | 0.529673 | 2.3:+73110938 | None:intergenic |
GCTGCTTTGGAAACACAACT+TGG | 0.530870 | 2.3:-73110203 | MS.gene002263:CDS |
TGAATTGATGGATGTTCTTG+TGG | 0.533307 | 2.3:-73112562 | MS.gene002263:CDS |
ATGGAGATTGATGGTGATGG+TGG | 0.533466 | 2.3:-73116842 | MS.gene002263:CDS |
CAAAGTTGTTCAGTGCCTGA+TGG | 0.535223 | 2.3:-73114402 | MS.gene002263:CDS |
GAAATTGATCAAGCTGAGAC+TGG | 0.535955 | 2.3:-73111470 | MS.gene002263:CDS |
TGGTTGATAGTATATCCATC+AGG | 0.537431 | 2.3:+73114387 | None:intergenic |
GAAGTGCCAAATCAGACTTT+CGG | 0.537715 | 2.3:-73110487 | MS.gene002263:CDS |
TTCTGAAATAGGCTCTATTG+AGG | 0.539258 | 2.3:-73114081 | MS.gene002263:CDS |
ATGTTACACAGGTAAGCCTC+AGG | 0.539889 | 2.3:-73111002 | MS.gene002263:intron |
AGGTGTTTCTTCTTCAAGAG+AGG | 0.542309 | 2.3:-73116738 | MS.gene002263:intron |
ACAAATGGTGAATGAGTTGA+AGG | 0.542466 | 2.3:-73116897 | MS.gene002263:CDS |
AATATAGCCGAATCCGGAGC+TGG | 0.542555 | 2.3:+73117034 | None:intergenic |
TTGAGGATAAAGAATCTCCT+AGG | 0.544287 | 2.3:-73114064 | MS.gene002263:CDS |
GCAGCTTCTGAGTACTCGCT+TGG | 0.545003 | 2.3:+73112678 | None:intergenic |
GTTGAGCCGCCTAATGATCT+GGG | 0.545720 | 2.3:-73113735 | MS.gene002263:CDS |
GTAGATTCAACTAGCGGCGG+CGG | 0.546291 | 2.3:-73117010 | MS.gene002263:CDS |
TGAGTTGAAGGAAGTTCAGA+AGG | 0.548314 | 2.3:-73116885 | MS.gene002263:CDS |
CGAAGCACTTGAATTGGTGA+TGG | 0.548587 | 2.3:-73110459 | MS.gene002263:CDS |
CTAGCAACCGAGAGTGGTGA+AGG | 0.552221 | 2.3:-73110422 | MS.gene002263:CDS |
CATCCTCATCATCTAAAGAC+CGG | 0.553770 | 2.3:+73113655 | None:intergenic |
ATCTTCAACCAAACCAACAA+TGG | 0.555287 | 2.3:-73117128 | MS.gene002263:CDS |
GAAGAAAATATTGAAAGCAA+AGG | 0.555883 | 2.3:-73110882 | MS.gene002263:CDS |
GCTGTTCGTAGATTGATTCG+AGG | 0.556442 | 2.3:-73116758 | MS.gene002263:CDS |
CTCCCATGCTATGAAAGAGT+TGG | 0.556719 | 2.3:-73110354 | MS.gene002263:CDS |
ACGACATCAGCCGAAGGACG+TGG | 0.558256 | 2.3:+73113756 | None:intergenic |
AGAAGATGATGCAGAGGTTG+GGG | 0.559328 | 2.3:-73112592 | MS.gene002263:CDS |
AGTAAAAGATTTGCAAGCAA+TGG | 0.559584 | 2.3:-73113625 | MS.gene002263:CDS |
CTTCCGGTCTTTAGATGATG+AGG | 0.560084 | 2.3:-73113658 | MS.gene002263:CDS |
AACACACCAATATGAAACTC+CGG | 0.560688 | 2.3:+73116968 | None:intergenic |
TTGTTGGCAAATGCTCATAA+GGG | 0.564120 | 2.3:-73113786 | MS.gene002263:CDS |
ACTAGCGGCGGCGGTAGTGG+TGG | 0.564350 | 2.3:-73117001 | MS.gene002263:CDS |
GGTCATGAGATGAGAAGAGA+AGG | 0.567102 | 2.3:+73114504 | None:intergenic |
GGAAGCGGCGGTGAAACAAA+TGG | 0.569612 | 2.3:-73116912 | MS.gene002263:CDS |
CATCCGCATCAGCCCATCAT+CGG | 0.572641 | 2.3:+73111601 | None:intergenic |
CCTGCAAGACATCCAGATGC+GGG | 0.573562 | 2.3:-73111551 | MS.gene002263:CDS |
AGTACTCGCTTGGACAAAGA+AGG | 0.573716 | 2.3:+73112688 | None:intergenic |
GTGTGGGTTAACAAAGGCAC+GGG | 0.575582 | 2.3:+73110955 | None:intergenic |
AAGCTCCTGGACTGGACAAG+TGG | 0.579076 | 2.3:-73114996 | MS.gene002263:CDS |
GCAAATGCTCATAAGGGAGA+GGG | 0.579740 | 2.3:-73113780 | MS.gene002263:CDS |
CACTAACTTCAGCAGTGTGT+GGG | 0.580709 | 2.3:+73110939 | None:intergenic |
TACTATCAACCAACAACACA+TGG | 0.581340 | 2.3:-73114376 | MS.gene002263:CDS |
AACAATTACTCAGGAAGGAG+AGG | 0.581483 | 2.3:+73114830 | None:intergenic |
ATACCTTCAAACAATTACTC+AGG | 0.583544 | 2.3:+73114821 | None:intergenic |
CAAGTATAAAATTATTGAGA+CGG | 0.585225 | 2.3:+73115446 | None:intergenic |
AGTACCGCTTCCTATTTGCA+AGG | 0.586680 | 2.3:+73115481 | None:intergenic |
TTGCGGAGTCCGAACTGCAG+AGG | 0.587099 | 2.3:-73110652 | MS.gene002263:CDS |
GGTGAAACAGGTGAGAGCGA+TGG | 0.587248 | 2.3:-73111449 | MS.gene002263:CDS |
GGATGAAGATAATGCCTTGG+AGG | 0.589707 | 2.3:-73114138 | MS.gene002263:CDS |
TTATGAGGGTGGTCAAGGGA+TGG | 0.589760 | 2.3:-73116861 | MS.gene002263:CDS |
CGACTCTGAGTCTGTAGTTG+AGG | 0.592639 | 2.3:-73111417 | MS.gene002263:CDS |
GCTATACAGAAGCACAGCAA+TGG | 0.593564 | 2.3:-73114269 | MS.gene002263:CDS |
TTGCAAAGAGCATTTGATGT+GGG | 0.593810 | 2.3:+73113834 | None:intergenic |
AATACAGCATGGCCAATCCA+TGG | 0.594671 | 2.3:+73110533 | None:intergenic |
ACTCAGGAAGGAGAGGTGAT+CGG | 0.597768 | 2.3:+73114837 | None:intergenic |
AAAGCAAAGGATCATCCAAA+GGG | 0.598470 | 2.3:-73110869 | MS.gene002263:CDS |
GAAAGCAAAGGATCATCCAA+AGG | 0.599025 | 2.3:-73110870 | MS.gene002263:CDS |
ATTCTGATGATTCAGATAGT+GGG | 0.599068 | 2.3:-73111364 | MS.gene002263:CDS |
GATGCCGCATCTTCCAATTG+TGG | 0.601907 | 2.3:+73114635 | None:intergenic |
CTTCAAACAATTACTCAGGA+AGG | 0.602501 | 2.3:+73114825 | None:intergenic |
AAACAATTGTCAGATTGGGT+GGG | 0.602741 | 2.3:-73114326 | MS.gene002263:CDS |
TGTGTGGGTTAACAAAGGCA+CGG | 0.602980 | 2.3:+73110954 | None:intergenic |
TCTCCCTTGCAAATAGGAAG+CGG | 0.604277 | 2.3:-73115485 | MS.gene002263:CDS |
TGGTGCTATCGACAAAATCA+GGG | 0.605594 | 2.3:-73115783 | MS.gene002263:CDS |
GAAGTAACTTCATCAATGAA+GGG | 0.606468 | 2.3:-73115725 | MS.gene002263:CDS |
CCTCTGCATCATCTTCTCCA+GGG | 0.606722 | 2.3:+73112598 | None:intergenic |
CGAACAGCATATCGAACAGA+AGG | 0.607154 | 2.3:+73116773 | None:intergenic |
TTTCCAATAATGAAAGGATG+CGG | 0.608175 | 2.3:+73111228 | None:intergenic |
AAGTCACTAGCAACCGAGAG+TGG | 0.609058 | 2.3:-73110428 | MS.gene002263:CDS |
TGTGGATGAAGATAATGCCT+TGG | 0.609887 | 2.3:-73114141 | MS.gene002263:CDS |
CTCTGCATCATCTTCTCCAG+GGG | 0.613059 | 2.3:+73112599 | None:intergenic |
GGGATGGAGATTGATGGTGA+TGG | 0.613191 | 2.3:-73116845 | MS.gene002263:CDS |
GCAATGATATCACCGATGAT+GGG | 0.613735 | 2.3:-73111613 | MS.gene002263:CDS |
GTACCGCTTCCTATTTGCAA+GGG | 0.614801 | 2.3:+73115482 | None:intergenic |
CTGATCTGAAGGTTCCTCCA+AGG | 0.616326 | 2.3:+73114124 | None:intergenic |
TCTTAAAACATTGACTCCTG+AGG | 0.616364 | 2.3:-73110231 | MS.gene002263:CDS |
ACCTGCAAGACATCCAGATG+CGG | 0.618983 | 2.3:-73111552 | MS.gene002263:CDS |
AGTACGTAAGTTCTGTGTCA+AGG | 0.622191 | 2.3:-73110294 | MS.gene002263:CDS |
TGTTCCACAATTGGAAGATG+CGG | 0.622868 | 2.3:-73114639 | MS.gene002263:CDS |
CCCTGGAGAAGATGATGCAG+AGG | 0.623336 | 2.3:-73112598 | MS.gene002263:CDS |
AGGCTTATGAGGGTGGTCAA+GGG | 0.628293 | 2.3:-73116865 | MS.gene002263:CDS |
AAATATTTAAAAGAAGACCA+TGG | 0.628974 | 2.3:-73110550 | MS.gene002263:CDS |
GTACATCATCACTGCAGTCG+TGG | 0.629610 | 2.3:+73112760 | None:intergenic |
GTTCAGAAGGCTTATGAGGG+TGG | 0.630689 | 2.3:-73116872 | MS.gene002263:CDS |
GAAGTTCAGAAGGCTTATGA+GGG | 0.633937 | 2.3:-73116875 | MS.gene002263:CDS |
TGATGATGCAATGTTCAGGA+TGG | 0.635467 | 2.3:-73111336 | MS.gene002263:CDS |
AAGCACCATATGCGAATAGG+CGG | 0.636479 | 2.3:+73115589 | None:intergenic |
GAACTCGTAACTTCTCGTCG+TGG | 0.643517 | 2.3:+73113964 | None:intergenic |
CTTGCAAAGAGCATTTGATG+TGG | 0.647224 | 2.3:+73113833 | None:intergenic |
GTGAACACGAGGCTGACAGA+AGG | 0.648318 | 2.3:+73114703 | None:intergenic |
GGCTCAACGACATCAGCCGA+AGG | 0.649021 | 2.3:+73113750 | None:intergenic |
TGATCAATAGCAGACCGCAT+AGG | 0.649279 | 2.3:+73112504 | None:intergenic |
CGCATAGGAGCTGATGACTG+TGG | 0.649317 | 2.3:+73112519 | None:intergenic |
CAAATGCTCATAAGGGAGAG+GGG | 0.651139 | 2.3:-73113779 | MS.gene002263:CDS |
AGCAGTGTGTGGGTTAACAA+AGG | 0.656507 | 2.3:+73110949 | None:intergenic |
GACCGGAAGAGAGAAACTGA+AGG | 0.657617 | 2.3:+73113672 | None:intergenic |
TCACAATTCAAAACAGAACC+CGG | 0.659461 | 2.3:-73114200 | MS.gene002263:CDS |
TAGCAACCGAGAGTGGTGAA+GGG | 0.660003 | 2.3:-73110421 | MS.gene002263:CDS |
CACAGTCATCAGCTCCTATG+CGG | 0.663288 | 2.3:-73112518 | MS.gene002263:CDS |
AAATAAAGCCAAATACAGCA+TGG | 0.665895 | 2.3:+73110522 | None:intergenic |
GTCATGAGATGAGAAGAGAA+GGG | 0.666467 | 2.3:+73114505 | None:intergenic |
TCACCGATGATGGGCTGATG+CGG | 0.668428 | 2.3:-73111604 | MS.gene002263:CDS |
TGATGATTCAGATAGTGGGA+TGG | 0.668681 | 2.3:-73111360 | MS.gene002263:CDS |
GGCCAAACACTGTGAACACG+AGG | 0.670920 | 2.3:+73114692 | None:intergenic |
TGAATCGATTAGGGAAGCGG+CGG | 0.676427 | 2.3:-73116924 | MS.gene002263:CDS |
TGTGTTTAAGGATTTAGCGG+CGG | 0.680588 | 2.3:-73116951 | MS.gene002263:CDS |
AGTTGGACGAGAAATTTAGG+TGG | 0.682366 | 2.3:-73113866 | MS.gene002263:CDS |
GAAAATTTGACTGTATCACA+AGG | 0.688705 | 2.3:-73114247 | MS.gene002263:CDS |
CAGGAAGGAGAGGTGATCGG+CGG | 0.689005 | 2.3:+73114840 | None:intergenic |
ATATTGGTAGATTCAACTAG+CGG | 0.689407 | 2.3:-73117016 | MS.gene002263:CDS |
GGAAGCTACATTATCCAGAG+AGG | 0.695301 | 2.3:-73113604 | MS.gene002263:intron |
GAGTACACAGTAAGAACCTG+AGG | 0.695385 | 2.3:+73110986 | None:intergenic |
TACGAACCCAGATCATTAGG+CGG | 0.700755 | 2.3:+73113729 | None:intergenic |
TTGGTAGATTCAACTAGCGG+CGG | 0.715094 | 2.3:-73117013 | MS.gene002263:CDS |
AATCATCAGAATCTTCAGGG+TGG | 0.753774 | 2.3:+73111375 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 73110166 | 73117245 | 73110166 | ID=MS.gene002263 |
chr2.3 | mRNA | 73110166 | 73117245 | 73110166 | ID=MS.gene002263.t1;Parent=MS.gene002263 |
chr2.3 | exon | 73116739 | 73117245 | 73116739 | ID=MS.gene002263.t1.exon1;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73116739 | 73117245 | 73116739 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73115721 | 73115846 | 73115721 | ID=MS.gene002263.t1.exon2;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73115721 | 73115846 | 73115721 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73115437 | 73115634 | 73115437 | ID=MS.gene002263.t1.exon3;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73115437 | 73115634 | 73115437 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73114825 | 73115052 | 73114825 | ID=MS.gene002263.t1.exon4;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73114825 | 73115052 | 73114825 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73113605 | 73114732 | 73113605 | ID=MS.gene002263.t1.exon5;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73113605 | 73114732 | 73113605 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73112503 | 73112790 | 73112503 | ID=MS.gene002263.t1.exon6;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73112503 | 73112790 | 73112503 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73111207 | 73111651 | 73111207 | ID=MS.gene002263.t1.exon7;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73111207 | 73111651 | 73111207 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
chr2.3 | exon | 73110166 | 73111013 | 73110166 | ID=MS.gene002263.t1.exon8;Parent=MS.gene002263.t1 |
chr2.3 | CDS | 73110166 | 73111013 | 73110166 | ID=cds.MS.gene002263.t1;Parent=MS.gene002263.t1 |
Gene Sequence |
Protein sequence |