AlfalfaGEDB | MS.gene04418

M. sativa cultivar XinJiangDaYe / MS.gene04418

KEGG: K04802
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006275 GO:0008150 GO:0009889 GO:0010556 GO:0019222 GO:0030234 GO:0030337 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0060255 GO:0065007 GO:0097159 GO:0098772 GO:1901363 GO:2000112
PFAM: PF00705.21 PF02747.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04418.t1	XP_013460113.1	99.6	266	1	0	1	266	1	266	4.60E-142	513.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04418.t1	O82134	96.2	265	10	0	1	265	1	265	8.3e-140	497.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04418.t1	A0A072UWC3	99.6	266	1	0	1	266	1	266	3.3e-142	513.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene04418	MS.gene47284	PPI
MS.gene04418	MS.gene79893	PPI
MS.gene04418	MS.gene067802	PPI
MS.gene04418	MS.gene63395	PPI
MS.gene04418	MS.gene34478	PPI
MS.gene04501	MS.gene04418	PPI
MS.gene04418	MS.gene058795	PPI
MS.gene20956	MS.gene04418	PPI
MS.gene003482	MS.gene04418	PPI
MS.gene04418	MS.gene063067	PPI
MS.gene79799	MS.gene04418	PPI
MS.gene04418	MS.gene04620	PPI
MS.gene043645	MS.gene04418	PPI
MS.gene04418	MS.gene52850	PPI
MS.gene04418	MS.gene46262	PPI
MS.gene04418	MS.gene015179	PPI
MS.gene04418	MS.gene043595	PPI
MS.gene04418	MS.gene002263	PPI
MS.gene04418	MS.gene060219	PPI
MS.gene04079	MS.gene04418	PPI
MS.gene04418	MS.gene011421	PPI
MS.gene04418	MS.gene01240	PPI
MS.gene04418	MS.gene040755	PPI
MS.gene04418	MS.gene65249	PPI
MS.gene04418	MS.gene49075	PPI
MS.gene04418	MS.gene04400	PPI
MS.gene043593	MS.gene04418	PPI
MS.gene049768	MS.gene04418	PPI
MS.gene04418	MS.gene038750	PPI
MS.gene04418	MS.gene77531	PPI
MS.gene035484	MS.gene04418	PPI
MS.gene04418	MS.gene033505	PPI
MS.gene04418	MS.gene62799	PPI
MS.gene04418	MS.gene049767	PPI
MS.gene04418	MS.gene042871	PPI
MS.gene007737	MS.gene04418	PPI
MS.gene064353	MS.gene04418	PPI
MS.gene04418	MS.gene28806	PPI
MS.gene04418	MS.gene72993	PPI
MS.gene04418	MS.gene93335	PPI
MS.gene08109	MS.gene04418	PPI
MS.gene03199	MS.gene04418	PPI
MS.gene014498	MS.gene04418	PPI
MS.gene04418	MS.gene75670	PPI
MS.gene04418	MS.gene066960	PPI
MS.gene04418	MS.gene52112	PPI
MS.gene041054	MS.gene04418	PPI
MS.gene21089	MS.gene04418	PPI
MS.gene004126	MS.gene04418	PPI
MS.gene04418	MS.gene007196	PPI
MS.gene04418	MS.gene060573	PPI
MS.gene84977	MS.gene04418	PPI
MS.gene04418	MS.gene52656	PPI
MS.gene04418	MS.gene64653	PPI
MS.gene04418	MS.gene09124	PPI
MS.gene04418	MS.gene045358	PPI
MS.gene75426	MS.gene04418	PPI
MS.gene04418	MS.gene09125	PPI
MS.gene04418	MS.gene049824	PPI
MS.gene03698	MS.gene04418	PPI
MS.gene073732	MS.gene04418	PPI
MS.gene04541	MS.gene04418	PPI
MS.gene04418	MS.gene033382	PPI
MS.gene04418	MS.gene72840	PPI
MS.gene84978	MS.gene04418	PPI
MS.gene057670	MS.gene04418	PPI
MS.gene04418	MS.gene08084	PPI
MS.gene004127	MS.gene04418	PPI
MS.gene04418	MS.gene014181	PPI
MS.gene04418	MS.gene005611	PPI
MS.gene04418	MS.gene04020	PPI
MS.gene04418	MS.gene020348	PPI
MS.gene04418	MS.gene49838	PPI
MS.gene04418	MS.gene013784	PPI
MS.gene41343	MS.gene04418	PPI
MS.gene68113	MS.gene04418	PPI
MS.gene04418	MS.gene96593	PPI
MS.gene63718	MS.gene04418	PPI
MS.gene87898	MS.gene04418	PPI
MS.gene04094	MS.gene04418	PPI
MS.gene04418	MS.gene005383	PPI
MS.gene04418	MS.gene55120	PPI
MS.gene04418	MS.gene070094	PPI
MS.gene043643	MS.gene04418	PPI
MS.gene04418	MS.gene06380	PPI
MS.gene035826	MS.gene04418	PPI
MS.gene04418	MS.gene42324	PPI
MS.gene000365	MS.gene04418	PPI
MS.gene04418	MS.gene02570	PPI
MS.gene013784	MS.gene04418	PPI
MS.gene07741	MS.gene04418	PPI
MS.gene04418	MS.gene04079	PPI
MS.gene04418	MS.gene007738	PPI
MS.gene006309	MS.gene04418	PPI
MS.gene04418	MS.gene73093	PPI
MS.gene064351	MS.gene04418	PPI
MS.gene035828	MS.gene04418	PPI
MS.gene51874	MS.gene04418	PPI
MS.gene08211	MS.gene04418	PPI
MS.gene04418	MS.gene013296	PPI
MS.gene04418	MS.gene050408	PPI
MS.gene04418	MS.gene026877	PPI
MS.gene04418	MS.gene41722	PPI
MS.gene044567	MS.gene04418	PPI
MS.gene04418	MS.gene24697	PPI
MS.gene04418	MS.gene035825	PPI
MS.gene04418	MS.gene55626	PPI
MS.gene04418	MS.gene82109	PPI
MS.gene04418	MS.gene024064	PPI
MS.gene04418	MS.gene072703	PPI
MS.gene04418	MS.gene84545	PPI
MS.gene04418	MS.gene049822	PPI
MS.gene04418	MS.gene43369	PPI
MS.gene99872	MS.gene04418	PPI
MS.gene04418	MS.gene23508	PPI
MS.gene04418	MS.gene014499	PPI
MS.gene04418	MS.gene017982	PPI
MS.gene04418	MS.gene047599	PPI
MS.gene04418	MS.gene028064	PPI
MS.gene04418	MS.gene018731	PPI
MS.gene04418	MS.gene064682	PPI
MS.gene04418	MS.gene20720	PPI
MS.gene04418	MS.gene050299	PPI
MS.gene04418	MS.gene045065	PPI
MS.gene04418	MS.gene070092	PPI
MS.gene04418	MS.gene97025	PPI
MS.gene04418	MS.gene69196	PPI
MS.gene028066	MS.gene04418	PPI
MS.gene04418	MS.gene02221	PPI
MS.gene04418	MS.gene40912	PPI
MS.gene05640	MS.gene04418	PPI
MS.gene072401	MS.gene04418	PPI
MS.gene04418	MS.gene010320	PPI
MS.gene04418	MS.gene02591	PPI
MS.gene53708	MS.gene04418	PPI
MS.gene52605	MS.gene04418	PPI
MS.gene049266	MS.gene04418	PPI
MS.gene04418	MS.gene68716	PPI
MS.gene013822	MS.gene04418	PPI
MS.gene07047	MS.gene04418	PPI
MS.gene04418	MS.gene03699	PPI
MS.gene04418	MS.gene07203	PPI
MS.gene04418	MS.gene026875	PPI
MS.gene04418	MS.gene41419	PPI
MS.gene04418	MS.gene037044	PPI
MS.gene04418	MS.gene009300	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04418.t1	MTR_3g462130	99.624	266	1	0	1	266	1	266	0.0	545

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04418.t1	AT2G29570	89.057	265	28	1	1	265	1	264	5.97e-179	493
MS.gene04418.t1	AT1G07370	90.152	264	25	1	1	264	1	263	1.59e-178	491

Find 60 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCACTTCTCAAGAAGGTTT+TGG	0.265918	3.4:-57697098	MS.gene04418:CDS
CTGTGACCGGAATCTTTCTA+TGG	0.269865	3.4:-57696942	MS.gene04418:CDS
TGATGATATCATTACTATTA+AGG	0.286022	3.4:-57696873	MS.gene04418:CDS
TAGTGAGCACCTTGGAATTC+CGG	0.342488	3.4:-57695664	MS.gene04418:CDS
TTGCTGAGATGGGTTATGTT+AGG	0.359199	3.4:-57695041	MS.gene04418:CDS
GGGTTATGTTAGGTTCTATC+TGG	0.362548	3.4:-57695031	MS.gene04418:CDS
CATCTATATCCAACTAAACT+TGG	0.367153	3.4:+57694971	None:intergenic
TGTATCTTAATGCAAATTGC+AGG	0.376288	3.4:+57695151	None:intergenic
TGGTTTCTCCCTTCAAGCTA+TGG	0.380238	3.4:-57697026	MS.gene04418:CDS
TTAGAACTCCGTCTAGTTCA+AGG	0.383436	3.4:-57697121	MS.gene04418:CDS
GGGTATGAATCTGAACAATA+TGG	0.386205	3.4:-57696921	MS.gene04418:CDS
AAAATCAGAAATCTTGTCTT+GGG	0.388430	3.4:+57695710	None:intergenic
GAGCTGCAAACATAGTTTGC+AGG	0.393234	3.4:-57695403	MS.gene04418:CDS
CAAAATCAGAAATCTTGTCT+TGG	0.404879	3.4:+57695709	None:intergenic
GCGCTTCTGCTTCGTTCTGA+AGG	0.415834	3.4:-57696980	MS.gene04418:CDS
TCATACCCATAGAAAGATTC+CGG	0.424128	3.4:+57696936	None:intergenic
ATCCAACTAAACTTGGGGCT+TGG	0.430031	3.4:+57694978	None:intergenic
AATTTCGATTGTTCCTCTAC+TGG	0.431335	3.4:-57697046	MS.gene04418:CDS
CGCTTCTGCTTCGTTCTGAA+GGG	0.435644	3.4:-57696979	MS.gene04418:CDS
ATCTTGTACTCAACAACAAC+TGG	0.435854	3.4:+57695063	None:intergenic
CTGAATATGATGCCATTGTT+AGG	0.450696	3.4:-57695638	MS.gene04418:CDS
TGTAAAGATCTTAGTAGCAT+TGG	0.452246	3.4:-57695588	MS.gene04418:CDS
GGCTAGAATCCATAGCTTGA+AGG	0.455099	3.4:+57697017	None:intergenic
TGCAGCTCCAATGTCACCCT+TGG	0.455509	3.4:+57695418	None:intergenic
ATTACTATTAAGGCTGATGA+TGG	0.460832	3.4:-57696863	MS.gene04418:CDS
ATCTATATCCAACTAAACTT+GGG	0.465021	3.4:+57694972	None:intergenic
TCAAGGTTCACTTCTCAAGA+AGG	0.468437	3.4:-57697104	MS.gene04418:CDS
AGTTGTCATCTCGGTTACTA+AGG	0.478522	3.4:-57695459	MS.gene04418:CDS
TTGTGTTGCAGTTGTCATCT+CGG	0.495202	3.4:-57695468	MS.gene04418:intron
TTGAGCATTATCGCTGTGAC+CGG	0.503477	3.4:-57696955	MS.gene04418:CDS
TCTATGACAGTAGCATCATC+AGG	0.509310	3.4:+57695192	None:intergenic
TGCCATCTGCTGAGTTTGCT+AGG	0.512820	3.4:-57695614	MS.gene04418:CDS
ATGGCATCATATTCAGCCTC+CGG	0.535879	3.4:+57695645	None:intergenic
TGAGTACAAGATTGCTGAGA+TGG	0.541644	3.4:-57695052	MS.gene04418:CDS
CTTAGTAGCATTGGTGACAC+TGG	0.547229	3.4:-57695579	MS.gene04418:intron
GCTAGAATCCATAGCTTGAA+GGG	0.562764	3.4:+57697018	None:intergenic
ACTAGGGCTTTCGAACATGA+AGG	0.573205	3.4:+57696826	None:intergenic
AATGCAAATTGCAGGGACAC+AGG	0.574686	3.4:+57695159	None:intergenic
TGTCATCTCGGTTACTAAGG+AGG	0.575341	3.4:-57695456	MS.gene04418:CDS
GTCATCTCGGTTACTAAGGA+GGG	0.577137	3.4:-57695455	MS.gene04418:CDS
TGTGACCGGAATCTTTCTAT+GGG	0.581805	3.4:-57696941	MS.gene04418:CDS
GCGAAGATGTTGAAGTGTGC+TGG	0.584665	3.4:-57696899	MS.gene04418:CDS
CAGACTGATAGTAACTGTGC+TGG	0.590689	3.4:+57695098	None:intergenic
ATCCTAGCAAACTCAGCAGA+TGG	0.593618	3.4:+57695612	None:intergenic
ATAGTAACTGTGCTGGACAA+AGG	0.595033	3.4:+57695105	None:intergenic
GCTGGACAAAGGAGTTGCCT+TGG	0.607604	3.4:+57695116	None:intergenic
TTACTATTAAGGCTGATGAT+GGG	0.610804	3.4:-57696862	MS.gene04418:CDS
GTATCTTAATGCAAATTGCA+GGG	0.611980	3.4:+57695152	None:intergenic
ATTCAGCCTCCGGAATTCCA+AGG	0.619118	3.4:+57695655	None:intergenic
TCTATATCCAACTAAACTTG+GGG	0.620329	3.4:+57694973	None:intergenic
GAGTACAAGATTGCTGAGAT+GGG	0.631104	3.4:-57695051	MS.gene04418:CDS
GCAGAACACTACTGTGGACA+AGG	0.634025	3.4:-57695381	MS.gene04418:intron
AACTAGACGGAGTTCTAACA+TGG	0.638008	3.4:+57697126	None:intergenic
AGCAGATGGCATCCTAACAA+TGG	0.641376	3.4:+57695626	None:intergenic
GACATCGATAGTGAGCACCT+TGG	0.657990	3.4:-57695672	MS.gene04418:CDS
TTGAAGGGAGAAACCAGTAG+AGG	0.670541	3.4:+57697033	None:intergenic
GAAGCGCGACAAGAGCAACA+TGG	0.673728	3.4:+57696996	None:intergenic
TGAGCACCTTGGAATTCCGG+AGG	0.683837	3.4:-57695661	MS.gene04418:CDS
GAAGTGAACCTTGAACTAGA+CGG	0.688677	3.4:+57697113	None:intergenic
TTGCAGGCAGAACACTACTG+TGG	0.709888	3.4:-57695387	MS.gene04418:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGATTAATATTTGTAATT+CGG	-	chr3.4:57696615-57696634	MS.gene04418:intron	10.0%
!!	GATGTATTTGATAAATTTAA+GGG	-	chr3.4:57696205-57696224	MS.gene04418:intron	15.0%
!!	TGATGTATTTGATAAATTTA+AGG	-	chr3.4:57696204-57696223	MS.gene04418:intron	15.0%
!!!	AGATTTTAATTTGAAATGTT+AGG	-	chr3.4:57695468-57695487	MS.gene04418:intron	15.0%
!!!	GATTTTAATTTGAAATGTTA+GGG	-	chr3.4:57695469-57695488	MS.gene04418:intron	15.0%
!!!	TGTTAAATTTTGTATGATTT+GGG	-	chr3.4:57696087-57696106	MS.gene04418:intron	15.0%
!!!	TTTAGTTTTAGTGTTAATTT+GGG	-	chr3.4:57695329-57695348	MS.gene04418:intron	15.0%
!!!	TTTTAATTGACATTTTTACA+TGG	-	chr3.4:57696868-57696887	MS.gene04418:CDS	15.0%
!!	GATATATTTGATCAATTTCA+GGG	-	chr3.4:57695897-57695916	MS.gene04418:intron	20.0%
!!	TAACACTAAAACTAAAGAAT+TGG	+	chr3.4:57695325-57695344	None:intergenic	20.0%
!!	TGATATATTTGATCAATTTC+AGG	-	chr3.4:57695896-57695915	MS.gene04418:intron	20.0%
!!	TGATGATATCATTACTATTA+AGG	-	chr3.4:57695235-57695254	MS.gene04418:intron	20.0%
!!!	AACTTTTTTTGCTAAAGAAT+GGG	-	chr3.4:57695774-57695793	MS.gene04418:intron	20.0%
!!!	AATGCTAATTTTGTGTTATT+TGG	-	chr3.4:57695510-57695529	MS.gene04418:intron	20.0%
!!!	AGATCTATGATTTGAATTTT+AGG	-	chr3.4:57695816-57695835	MS.gene04418:intron	20.0%
!!!	ATGATTATTTTGGTGTTAAT+TGG	-	chr3.4:57695391-57695410	MS.gene04418:CDS	20.0%
!!!	ATGCTAATTTTGTGTTATTT+GGG	-	chr3.4:57695511-57695530	MS.gene04418:intron	20.0%
!!!	ATTTTAGTTTGAAACCTATA+AGG	-	chr3.4:57695608-57695627	MS.gene04418:CDS	20.0%
!!!	CTTTAGTTTTAGTGTTAATT+TGG	-	chr3.4:57695328-57695347	MS.gene04418:intron	20.0%
!!!	GATCTATGATTTGAATTTTA+GGG	-	chr3.4:57695817-57695836	MS.gene04418:intron	20.0%
!!!	GTGTTAAATTTTGTATGATT+TGG	-	chr3.4:57696086-57696105	MS.gene04418:intron	20.0%
!!!	TAACTTTTTTTGCTAAAGAA+TGG	-	chr3.4:57695773-57695792	MS.gene04418:intron	20.0%
!!!	TCATTGTTGTATGATTATTT+TGG	-	chr3.4:57695381-57695400	MS.gene04418:intron	20.0%
!!!	TCTCATTTCTAAAAATGTTT+TGG	-	chr3.4:57695708-57695727	MS.gene04418:CDS	20.0%
!!!	TGATTATTTTGGTGTTAATT+GGG	-	chr3.4:57695392-57695411	MS.gene04418:CDS	20.0%
!!!	TGTTAATTGATTGAATGTTT+TGG	-	chr3.4:57695437-57695456	MS.gene04418:CDS	20.0%
!!!	TGTTAATTTGGGTTTTAATT+GGG	-	chr3.4:57695340-57695359	MS.gene04418:intron	20.0%
!!!	TTTTAGTTTGAAACCTATAA+GGG	-	chr3.4:57695609-57695628	MS.gene04418:CDS	20.0%
!	AAAATCAGAAATCTTGTCTT+GGG	+	chr3.4:57696401-57696420	None:intergenic	25.0%
!	AAAGAAAACGAAACTTACTA+GGG	+	chr3.4:57695301-57695320	None:intergenic	25.0%
!	ACACATAACTTTAACTACAA+AGG	+	chr3.4:57696172-57696191	None:intergenic	25.0%
!	ATTCAAATCATAGATCTGTT+AGG	+	chr3.4:57695813-57695832	None:intergenic	25.0%
!	CTATTAAAAATGACCCTTAT+AGG	+	chr3.4:57695625-57695644	None:intergenic	25.0%
!	GGTCTATTTGATAAATTTCA+GGG	-	chr3.4:57696058-57696077	MS.gene04418:intron	25.0%
!	GTGTTAATTGATTGAATCTT+TGG	-	chr3.4:57695575-57695594	MS.gene04418:intron	25.0%
!	TAAAAACATATGAACCACAA+TGG	+	chr3.4:57696334-57696353	None:intergenic	25.0%
!	TAAAGAAAACGAAACTTACT+AGG	+	chr3.4:57695302-57695321	None:intergenic	25.0%
!	TGGTCTATTTGATAAATTTC+AGG	-	chr3.4:57696057-57696076	MS.gene04418:intron	25.0%
!!	ATACATGAATTCTTTTACCA+AGG	-	chr3.4:57696975-57696994	MS.gene04418:CDS	25.0%
!!!	ATGTTTTGGTATCATATTTG+TGG	-	chr3.4:57696269-57696288	MS.gene04418:intron	25.0%
!!!	CTATAAGGGTCATTTTTAAT+AGG	-	chr3.4:57695623-57695642	MS.gene04418:CDS	25.0%
!!!	GACTTATTTTCTGACTTATT+GGG	-	chr3.4:57696305-57696324	MS.gene04418:intron	25.0%
!!!	GATTATTTTGGTGTTAATTG+GGG	-	chr3.4:57695393-57695412	MS.gene04418:CDS	25.0%
!!!	GGTTTTAATTGGGTTAATTA+GGG	-	chr3.4:57695350-57695369	MS.gene04418:intron	25.0%
!!!	GTGTTAATTTGGGTTTTAAT+TGG	-	chr3.4:57695339-57695358	MS.gene04418:intron	25.0%
!!!	TGACTTATTTTCTGACTTAT+TGG	-	chr3.4:57696304-57696323	MS.gene04418:intron	25.0%
!!!	TGCTAATTTTGTGTTATTTG+GGG	-	chr3.4:57695512-57695531	MS.gene04418:intron	25.0%
!!!	TGGTTCATATGTTTTTATAG+TGG	-	chr3.4:57696337-57696356	MS.gene04418:intron	25.0%
	ATAGATACCAAAACATGAAC+CGG	+	chr3.4:57695957-57695976	None:intergenic	30.0%
	ATTACTATTAAGGCTGATGA+TGG	-	chr3.4:57695245-57695264	MS.gene04418:intron	30.0%
	ATTTCAGGGTTACATGTTAT+CGG	-	chr3.4:57696021-57696040	MS.gene04418:intron	30.0%
	CAAAATCAGAAATCTTGTCT+TGG	+	chr3.4:57696402-57696421	None:intergenic	30.0%
	GTATCTTAATGCAAATTGCA+GGG	+	chr3.4:57696959-57696978	None:intergenic	30.0%
	GTTCAATGTTAATTCTGCAT+GGG	-	chr3.4:57695549-57695568	MS.gene04418:intron	30.0%
	TGTAAAGATCTTAGTAGCAT+TGG	-	chr3.4:57696520-57696539	MS.gene04418:intron	30.0%
	TGTATCTTAATGCAAATTGC+AGG	+	chr3.4:57696960-57696979	None:intergenic	30.0%
	TGTTCAATGTTAATTCTGCA+TGG	-	chr3.4:57695548-57695567	MS.gene04418:intron	30.0%
	TTACTATTAAGGCTGATGAT+GGG	-	chr3.4:57695246-57695265	MS.gene04418:intron	30.0%
!	AATTGGGTTAATTAGGGTTT+TGG	-	chr3.4:57695356-57695375	MS.gene04418:intron	30.0%
!	ATTGGGTTAATTAGGGTTTT+GGG	-	chr3.4:57695357-57695376	MS.gene04418:intron	30.0%
!	CACTTTTGTTCATCTGTTAT+AGG	-	chr3.4:57696556-57696575	MS.gene04418:intron	30.0%
!	TCATCATCTTCCTCTATTTT+TGG	+	chr3.4:57697105-57697124	None:intergenic	30.0%
!	TTTTGGTATCTATTTTGCTG+CGG	-	chr3.4:57695964-57695983	MS.gene04418:intron	30.0%
!!	GTTTTAGTGTTCAATTCTGT+AGG	-	chr3.4:57695919-57695938	MS.gene04418:intron	30.0%
!!	TTTGTGTTATTTGGGGATTA+GGG	-	chr3.4:57695519-57695538	MS.gene04418:intron	30.0%
!!!	GGGTTTTAATTGGGTTAATT+AGG	-	chr3.4:57695349-57695368	MS.gene04418:intron	30.0%
!!!	TGTTTTGGTAACTCTTCTTT+CGG	-	chr3.4:57695723-57695742	MS.gene04418:intron	30.0%
!!!	TTTTGTGTTATTTGGGGATT+AGG	-	chr3.4:57695518-57695537	MS.gene04418:intron	30.0%
	AATTTCGATTGTTCCTCTAC+TGG	-	chr3.4:57695062-57695081	MS.gene04418:CDS	35.0%
	ATCTTGTACTCAACAACAAC+TGG	+	chr3.4:57697048-57697067	None:intergenic	35.0%
	CTGAATATGATGCCATTGTT+AGG	-	chr3.4:57696470-57696489	MS.gene04418:intron	35.0%
	GATGTTTATGTGCTTGATCT+TGG	-	chr3.4:57695669-57695688	MS.gene04418:CDS	35.0%
	GGGTATGAATCTGAACAATA+TGG	-	chr3.4:57695187-57695206	MS.gene04418:CDS	35.0%
	TAACCACACAAAAACAAGTC+AGG	+	chr3.4:57696368-57696387	None:intergenic	35.0%
	TAGATACCAAAACATGAACC+GGG	+	chr3.4:57695956-57695975	None:intergenic	35.0%
	TCATACCCATAGAAAGATTC+CGG	+	chr3.4:57695175-57695194	None:intergenic	35.0%
	TTGTTTGGGTATCATACTTG+TGG	-	chr3.4:57696122-57696141	MS.gene04418:intron	35.0%
!	GGACTTTTTATAAGCGTTAC+AGG	-	chr3.4:57696792-57696811	MS.gene04418:intron	35.0%
!	TTCACTTCTCAAGAAGGTTT+TGG	-	chr3.4:57695010-57695029	MS.gene04418:CDS	35.0%
!!	TTTGGTGTTAATTGGGGTTA+GGG	-	chr3.4:57695399-57695418	MS.gene04418:CDS	35.0%
!!!	TGATTTTGAGATGAAGCTGA+TGG	-	chr3.4:57696414-57696433	MS.gene04418:intron	35.0%
!!!	TTTTACATGGCTGTTTTTGC+TGG	-	chr3.4:57696881-57696900	MS.gene04418:CDS	35.0%
!!!	TTTTGGTGTTAATTGGGGTT+AGG	-	chr3.4:57695398-57695417	MS.gene04418:CDS	35.0%
	AACGCTTATAAAAAGTCCCC+AGG	+	chr3.4:57696790-57696809	None:intergenic	40.0%
	ACGCTTATAAAAAGTCCCCA+GGG	+	chr3.4:57696789-57696808	None:intergenic	40.0%
	AGTTGTCATCTCGGTTACTA+AGG	-	chr3.4:57696649-57696668	MS.gene04418:intron	40.0%
	ATAGTAACTGTGCTGGACAA+AGG	+	chr3.4:57697006-57697025	None:intergenic	40.0%
	GAAGTGAACCTTGAACTAGA+CGG	+	chr3.4:57694998-57695017	None:intergenic	40.0%
	GAGTACAAGATTGCTGAGAT+GGG	-	chr3.4:57697057-57697076	MS.gene04418:CDS	40.0%
	GCTAGAATCCATAGCTTGAA+GGG	+	chr3.4:57695093-57695112	None:intergenic	40.0%
	GGGTTATGTTAGGTTCTATC+TGG	-	chr3.4:57697077-57697096	MS.gene04418:CDS	40.0%
	GTAACCCTGAAATTGACCAA+GGG	+	chr3.4:57696014-57696033	None:intergenic	40.0%
	GTTAATTGGGGTTAGGGTTT+GGG	-	chr3.4:57695405-57695424	MS.gene04418:CDS	40.0%
	TAGATGCTTGTATGCTGAGT+AGG	-	chr3.4:57695750-57695769	MS.gene04418:intron	40.0%
	TCAAGGTTCACTTCTCAAGA+AGG	-	chr3.4:57695004-57695023	MS.gene04418:CDS	40.0%
	TCTATGACAGTAGCATCATC+AGG	+	chr3.4:57696919-57696938	None:intergenic	40.0%
	TGAGTACAAGATTGCTGAGA+TGG	-	chr3.4:57697056-57697075	MS.gene04418:CDS	40.0%
	TGATACCCAAACAAGAACAG+AGG	+	chr3.4:57696116-57696135	None:intergenic	40.0%
	TGTAACCCTGAAATTGACCA+AGG	+	chr3.4:57696015-57696034	None:intergenic	40.0%
	TGTGACCGGAATCTTTCTAT+GGG	-	chr3.4:57695167-57695186	MS.gene04418:CDS	40.0%
	TGTTAATTGGGGTTAGGGTT+TGG	-	chr3.4:57695404-57695423	MS.gene04418:CDS	40.0%
	TTATAAAAAGTCCCCAGGGT+TGG	+	chr3.4:57696785-57696804	None:intergenic	40.0%
	TTATCACATGTTCCAACCCT+GGG	-	chr3.4:57696770-57696789	MS.gene04418:intron	40.0%
	TTATTTGGGGATTAGGGCTT+TGG	-	chr3.4:57695525-57695544	MS.gene04418:intron	40.0%
	TTGTGTTGCAGTTGTCATCT+CGG	-	chr3.4:57696640-57696659	MS.gene04418:intron	40.0%
	TTTATCACATGTTCCAACCC+TGG	-	chr3.4:57696769-57696788	MS.gene04418:intron	40.0%
!	CTATCTGGCTCCAAAAATAG+AGG	-	chr3.4:57697092-57697111	MS.gene04418:CDS	40.0%
!	GGTATCCTCTGTTCTTGTTT+GGG	-	chr3.4:57696108-57696127	MS.gene04418:intron	40.0%
!	GGTGTGAAGTTTTCAACCAA+GGG	-	chr3.4:57696674-57696693	MS.gene04418:intron	40.0%
!	TGTCTGCTCTGTTCATGTTT+TGG	-	chr3.4:57696255-57696274	MS.gene04418:intron	40.0%
!	TTAGAACTCCGTCTAGTTCA+AGG	-	chr3.4:57694987-57695006	MS.gene04418:CDS	40.0%
!	TTATCGGTTGCATGCTTAAC+TGG	-	chr3.4:57696037-57696056	MS.gene04418:intron	40.0%
!	TTTTCAACCAAGGGTGACAT+TGG	-	chr3.4:57696683-57696702	MS.gene04418:intron	40.0%
!!	TTGCTGAGATGGGTTATGTT+AGG	-	chr3.4:57697067-57697086	MS.gene04418:CDS	40.0%
!!!	GAAGGTTTTGGAATCGATCA+AGG	-	chr3.4:57695022-57695041	MS.gene04418:CDS	40.0%
!!!	GATCCTGACTTGTTTTTGTG+TGG	-	chr3.4:57696362-57696381	MS.gene04418:intron	40.0%
	AATGCAAATTGCAGGGACAC+AGG	+	chr3.4:57696952-57696971	None:intergenic	45.0%
	ACTAGGGCTTTCGAACATGA+AGG	+	chr3.4:57695285-57695304	None:intergenic	45.0%
	AGCAGATGGCATCCTAACAA+TGG	+	chr3.4:57696485-57696504	None:intergenic	45.0%
	ATCCTAGCAAACTCAGCAGA+TGG	+	chr3.4:57696499-57696518	None:intergenic	45.0%
	ATCTTGTATGTGCCCTGTGT+GGG	-	chr3.4:57695861-57695880	MS.gene04418:intron	45.0%
	ATGGCATCATATTCAGCCTC+CGG	+	chr3.4:57696466-57696485	None:intergenic	45.0%
	CAGACTGATAGTAACTGTGC+TGG	+	chr3.4:57697013-57697032	None:intergenic	45.0%
	CTAGCCCTTGGTCAATTTCA+GGG	-	chr3.4:57696007-57696026	MS.gene04418:intron	45.0%
	CTGTGACCGGAATCTTTCTA+TGG	-	chr3.4:57695166-57695185	MS.gene04418:CDS	45.0%
	GACTTATTGGGTAGCCATTG+TGG	-	chr3.4:57696317-57696336	MS.gene04418:intron	45.0%
	GGCTAGAATCCATAGCTTGA+AGG	+	chr3.4:57695094-57695113	None:intergenic	45.0%
	GGGTATCCTCTGTTCTTGTT+TGG	-	chr3.4:57696107-57696126	MS.gene04418:intron	45.0%
	GTCATCTCGGTTACTAAGGA+GGG	-	chr3.4:57696653-57696672	MS.gene04418:intron	45.0%
	TAGTGAGCACCTTGGAATTC+CGG	-	chr3.4:57696444-57696463	MS.gene04418:intron	45.0%
	TATCACATGTTCCAACCCTG+GGG	-	chr3.4:57696771-57696790	MS.gene04418:intron	45.0%
	TATCTTGTATGTGCCCTGTG+TGG	-	chr3.4:57695860-57695879	MS.gene04418:intron	45.0%
	TGGTTTCTCCCTTCAAGCTA+TGG	-	chr3.4:57695082-57695101	MS.gene04418:CDS	45.0%
	TGTCATCTCGGTTACTAAGG+AGG	-	chr3.4:57696652-57696671	MS.gene04418:intron	45.0%
	TTGAAGGGAGAAACCAGTAG+AGG	+	chr3.4:57695078-57695097	None:intergenic	45.0%
	TTGAGCATTATCGCTGTGAC+CGG	-	chr3.4:57695153-57695172	MS.gene04418:CDS	45.0%
!	GAGCTGCAAACATAGTTTGC+AGG	-	chr3.4:57696705-57696724	MS.gene04418:intron	45.0%
!	GGGTGTGAAGTTTTCAACCA+AGG	-	chr3.4:57696673-57696692	MS.gene04418:intron	45.0%
!!	CTTAGTAGCATTGGTGACAC+TGG	-	chr3.4:57696529-57696548	MS.gene04418:intron	45.0%
	AGTTAAGCATGCACCCACAC+AGG	+	chr3.4:57695877-57695896	None:intergenic	50.0%
	ATTCAGCCTCCGGAATTCCA+AGG	+	chr3.4:57696456-57696475	None:intergenic	50.0%
	ATTGGGGTTAGGGTTTGGGT+TGG	-	chr3.4:57695409-57695428	MS.gene04418:CDS	50.0%
	CTGTAGGATTTGTGTGTGCC+CGG	-	chr3.4:57695935-57695954	MS.gene04418:intron	50.0%
	GACATCGATAGTGAGCACCT+TGG	-	chr3.4:57696436-57696455	MS.gene04418:intron	50.0%
	GCAGAACACTACTGTGGACA+AGG	-	chr3.4:57696727-57696746	MS.gene04418:intron	50.0%
	GCGAAGATGTTGAAGTGTGC+TGG	-	chr3.4:57695209-57695228	MS.gene04418:intron	50.0%
	GCTAGCCCTTGGTCAATTTC+AGG	-	chr3.4:57696006-57696025	MS.gene04418:intron	50.0%
	GTTAAGCATGCACCCACACA+GGG	+	chr3.4:57695876-57695895	None:intergenic	50.0%
	TTGCAGGCAGAACACTACTG+TGG	-	chr3.4:57696721-57696740	MS.gene04418:intron	50.0%
!	CGCTTCTGCTTCGTTCTGAA+GGG	-	chr3.4:57695129-57695148	MS.gene04418:CDS	50.0%
!	TGCCATCTGCTGAGTTTGCT+AGG	-	chr3.4:57696494-57696513	MS.gene04418:intron	50.0%
!	TGTGTGCCCGGTTCATGTTT+TGG	-	chr3.4:57695947-57695966	MS.gene04418:intron	50.0%
!	TTGGGGTTAGGGTTTGGGTT+GGG	-	chr3.4:57695410-57695429	MS.gene04418:CDS	50.0%
	ATGACCTGTGAGCTAGCCCT+TGG	-	chr3.4:57695995-57696014	MS.gene04418:intron	55.0%
	GAAGCGCGACAAGAGCAACA+TGG	+	chr3.4:57695115-57695134	None:intergenic	55.0%
	GCGCTTCTGCTTCGTTCTGA+AGG	-	chr3.4:57695128-57695147	MS.gene04418:CDS	55.0%
	GCTGGACAAAGGAGTTGCCT+TGG	+	chr3.4:57696995-57697014	None:intergenic	55.0%
	TGAGCACCTTGGAATTCCGG+AGG	-	chr3.4:57696447-57696466	MS.gene04418:intron	55.0%
	TGCAGCTCCAATGTCACCCT+TGG	+	chr3.4:57696693-57696712	None:intergenic	55.0%
!!	TGGGGTTAGGGTTTGGGTTG+GGG	-	chr3.4:57695411-57695430	MS.gene04418:CDS	55.0%
!!	TTGACCAAGGGCTAGCTCAC+AGG	+	chr3.4:57696002-57696021	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	57694984	57697146	57694984	ID=MS.gene04418
chr3.4	mRNA	57694984	57697146	57694984	ID=MS.gene04418.t1;Parent=MS.gene04418
chr3.4	exon	57696828	57697146	57696828	ID=MS.gene04418.t1.exon1;Parent=MS.gene04418.t1
chr3.4	CDS	57696828	57697146	57696828	ID=cds.MS.gene04418.t1;Parent=MS.gene04418.t1
chr3.4	exon	57695580	57695732	57695580	ID=MS.gene04418.t1.exon2;Parent=MS.gene04418.t1
chr3.4	CDS	57695580	57695732	57695580	ID=cds.MS.gene04418.t1;Parent=MS.gene04418.t1
chr3.4	exon	57695382	57695479	57695382	ID=MS.gene04418.t1.exon3;Parent=MS.gene04418.t1
chr3.4	CDS	57695382	57695479	57695382	ID=cds.MS.gene04418.t1;Parent=MS.gene04418.t1
chr3.4	exon	57694984	57695214	57694984	ID=MS.gene04418.t1.exon4;Parent=MS.gene04418.t1
chr3.4	CDS	57694984	57695214	57694984	ID=cds.MS.gene04418.t1;Parent=MS.gene04418.t1

Gene Sequence

>MS.gene04418

ATGTTAGAACTCCGTCTAGTTCAAGGTTCACTTCTCAAGAAGGTTTTGGAATCGATCAAGGAACTCGTCAACGATGCAAATTTCGATTGTTCCTCTACTGGTTTCTCCCTTCAAGCTATGGATTCTAGCCATGTTGCTCTTGTCGCGCTTCTGCTTCGTTCTGAAGGGTTTGAGCATTATCGCTGTGACCGGAATCTTTCTATGGGTATGAATCTGAACAATATGGCGAAGATGTTGAAGTGTGCTGGTAATGATGATATCATTACTATTAAGGCTGATGATGGGAGTGATACTGTTACCTTCATGTTCGAAAGCCCTAGTAAGTTTCGTTTTCTTTACCAATTCTTTAGTTTTAGTGTTAATTTGGGTTTTAATTGGGTTAATTAGGGTTTTGGGTTCATTGTTGTATGATTATTTTGGTGTTAATTGGGGTTAGGGTTTGGGTTGGGGTTGTGTTAATTGATTGAATGTTTTGGTTTCTGTCAGATTTTAATTTGAAATGTTAGGGTTTAGTGTTAATTGATTGAATGCTAATTTTGTGTTATTTGGGGATTAGGGCTTTGGTGTTCAATGTTAATTCTGCATGGGATTGTGTTAATTGATTGAATCTTTGGTTTATGTTTGATTTTAGTTTGAAACCTATAAGGGTCATTTTTAATAGGTTTAGTGTCGAAATTTTATATCTGATGTTTATGTGCTTGATCTTGGAGTAGTTATTCTTTGTTCTCATTTCTAAAAATGTTTTGGTAACTCTTCTTTCGGATTTTAGATGCTTGTATGCTGAGTAGGTAACTTTTTTTGCTAAAGAATGGGTTTTTGATTTATGCCTAACAGATCTATGATTTGAATTTTAGGGTTTATTGTTTAATTCTGTAATATCTTGTATGTGCCCTGTGTGGGTGCATGCTTAACTGATATATTTGATCAATTTCAGGGTTTTAGTGTTCAATTCTGTAGGATTTGTGTGTGCCCGGTTCATGTTTTGGTATCTATTTTGCTGCGGTGTCACTTATGACCTGTGAGCTAGCCCTTGGTCAATTTCAGGGTTACATGTTATCGGTTGCATGCTTAACTGGTCTATTTGATAAATTTCAGGGTTTTAGTGTTAAATTTTGTATGATTTGGGTATCCTCTGTTCTTGTTTGGGTATCATACTTGTGGTGTCACTTATGACTTAAGAGTTAGCCTTTGTAGTTAAAGTTATGTGTTGTATGCTTAACTGATGTATTTGATAAATTTAAGGGTTTTAGTGTTTAATTCTGTAAAATTTATGTCTGCTCTGTTCATGTTTTGGTATCATATTTGTGGTCATATCACTTCTGACTTATTTTCTGACTTATTGGGTAGCCATTGTGGTTCATATGTTTTTATAGTGGAAGATCCTGACTTGTTTTTGTGTGGTTATGTGATGAAGCCCAAGACAAGATTTCTGATTTTGAGATGAAGCTGATGGACATCGATAGTGAGCACCTTGGAATTCCGGAGGCTGAATATGATGCCATTGTTAGGATGCCATCTGCTGAGTTTGCTAGGATTTGTAAAGATCTTAGTAGCATTGGTGACACTGGTAATCACTTTTGTTCATCTGTTATAGGATTTTCTTCTAATGCTTGACTGTTCTTGAGTGTAATTTTGATTAATATTTGTAATTCGGTGTTGTGTTGCAGTTGTCATCTCGGTTACTAAGGAGGGTGTGAAGTTTTCAACCAAGGGTGACATTGGAGCTGCAAACATAGTTTGCAGGCAGAACACTACTGTGGACAAGGTGAGATATTGATTCATTTTTTTATCACATGTTCCAACCCTGGGGACTTTTTATAAGCGTTACAGGCTTGTAGCTAAAATGTTAAATGTGTTTTATTTGTGTTTGATTGTTGAATTTGATTTTAATTGACATTTTTACATGGCTGTTTTTGCTGGTTGATGTTGCAGCCTGATGATGCTACTGTCATAGAGATGAAAGAGCCTGTGTCCCTGCAATTTGCATTAAGATACATGAATTCTTTTACCAAGGCAACTCCTTTGTCCAGCACAGTTACTATCAGTCTGTCGAATGAACTACCAGTTGTTGTTGAGTACAAGATTGCTGAGATGGGTTATGTTAGGTTCTATCTGGCTCCAAAAATAGAGGAAGATGATGAAGAAACCAAGCCCCAAGTTTAG

Protein sequence

>MS.gene04418.t1

MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLGIPEAEYDAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGAANIVCRQNTTVDKPDDATVIEMKEPVSLQFALRYMNSFTKATPLSSTVTISLSNELPVVVEYKIAEMGYVRFYLAPKIEEDDEETKPQV