AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003702

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003702.t1 MTR_4g070720 96.460 565 20 0 1 565 1 565 0.0 1144
MS.gene003702.t1 MTR_3g117090 71.577 577 144 12 1 565 1 569 0.0 767
MS.gene003702.t1 MTR_3g117090 71.533 548 139 11 1 539 1 540 0.0 742
MS.gene003702.t1 MTR_6g015645 69.731 446 116 10 133 565 9 448 0.0 595
MS.gene003702.t1 MTR_8g076880 58.813 556 199 11 26 565 13 554 0.0 595
MS.gene003702.t1 MTR_3g117100 53.897 603 215 16 19 565 28 623 0.0 578
MS.gene003702.t1 MTR_1g022480 52.749 582 225 13 24 560 35 611 0.0 556
MS.gene003702.t1 MTR_1g022480 52.568 584 225 13 24 560 35 613 0.0 555
MS.gene003702.t1 MTR_4g070810 53.819 576 207 12 42 565 48 616 0.0 552
MS.gene003702.t1 MTR_1g022480 52.122 589 225 14 24 560 35 618 0.0 548
MS.gene003702.t1 MTR_5g021050 73.874 333 84 3 32 361 10 342 0.0 520
MS.gene003702.t1 MTR_5g021050 42.169 83 47 1 480 561 388 470 1.27e-14 77.0
MS.gene003702.t1 MTR_5g021050 73.874 333 84 3 32 361 10 342 0.0 519
MS.gene003702.t1 MTR_5g021050 42.169 83 47 1 480 561 388 470 1.15e-14 77.0
MS.gene003702.t1 MTR_3g112150 50.086 583 230 10 21 565 13 572 4.83e-175 507
MS.gene003702.t1 MTR_1g022480 52.191 502 195 11 99 560 31 527 3.85e-164 478
MS.gene003702.t1 MTR_7g056587 57.958 333 131 3 12 337 11 341 6.92e-136 407
MS.gene003702.t1 MTR_7g056587 57.958 333 131 3 12 337 19 349 1.07e-135 407
MS.gene003702.t1 MTR_7g056587 57.958 333 131 3 12 337 19 349 1.34e-135 407
MS.gene003702.t1 MTR_7g056587 57.958 333 131 3 12 337 33 363 2.13e-135 407
MS.gene003702.t1 MTR_4g070790 58.333 300 112 3 68 360 49 342 5.71e-125 372
MS.gene003702.t1 MTR_3g010190 43.243 481 241 11 16 465 16 495 4.96e-123 372
MS.gene003702.t1 MTR_8g071000 39.551 579 289 16 38 563 33 603 2.96e-119 365
MS.gene003702.t1 MTR_5g012460 43.750 416 216 6 15 416 28 439 1.20e-111 340
MS.gene003702.t1 MTR_7g056587 65.179 224 78 0 114 337 1 224 1.95e-111 341
MS.gene003702.t1 MTR_4g070780 46.110 347 157 5 74 416 36 356 1.19e-92 290
MS.gene003702.t1 MTR_4g070730 52.985 268 87 4 73 339 41 270 3.32e-90 283
MS.gene003702.t1 MTR_6g034285 53.922 102 47 0 132 233 195 296 2.75e-29 120
MS.gene003702.t1 MTR_3g098530 32.143 224 133 7 89 311 62 267 5.89e-21 93.6
MS.gene003702.t1 MTR_3g060670 29.412 221 125 5 96 303 33 235 3.27e-20 92.8
MS.gene003702.t1 MTR_2g027140 28.745 247 136 7 79 303 13 241 3.37e-20 92.4
MS.gene003702.t1 MTR_8g096170 32.661 248 146 9 61 306 17 245 6.58e-20 90.1
MS.gene003702.t1 MTR_8g096180 32.589 224 132 7 89 306 42 252 8.00e-20 89.7
MS.gene003702.t1 MTR_8g096180 32.420 219 129 7 89 306 42 242 1.29e-19 89.0
MS.gene003702.t1 MTR_7g070480 28.000 225 140 7 96 312 100 310 1.61e-18 88.6
MS.gene003702.t1 MTR_4g013300 28.319 226 139 7 96 312 125 336 1.34e-16 82.8
MS.gene003702.t1 MTR_8g095360 26.754 228 148 6 96 316 181 396 3.01e-15 79.0
MS.gene003702.t1 MTR_2g027140 28.431 204 114 5 114 303 1 186 3.72e-15 76.3
MS.gene003702.t1 MTR_1g032580 30.047 213 130 8 97 306 32 228 7.25e-14 72.0
MS.gene003702.t1 MTR_4g033435 26.606 218 142 6 96 306 271 477 9.94e-14 74.3
MS.gene003702.t1 MTR_1g022185 30.047 213 123 9 99 306 48 239 3.38e-13 70.9
MS.gene003702.t1 MTR_4g033435 26.108 203 133 5 96 292 271 462 6.03e-13 71.6
MS.gene003702.t1 MTR_3g097350 27.511 229 147 7 87 306 238 456 3.50e-11 66.2
MS.gene003702.t1 MTR_2g031610 26.522 230 148 8 86 306 132 349 4.85e-11 65.5
MS.gene003702.t1 MTR_7g087500 26.364 220 135 6 97 311 47 244 8.91e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003702.t1 AT2G21540 62.039 569 187 10 1 563 1 546 0.0 674
MS.gene003702.t1 AT2G21540 62.039 569 187 10 1 563 1 546 0.0 674
MS.gene003702.t1 AT2G21540 62.039 569 187 10 1 563 1 546 0.0 674
MS.gene003702.t1 AT2G21540 62.039 569 187 10 1 563 1 546 0.0 674
MS.gene003702.t1 AT2G21540 61.404 570 183 11 1 563 1 540 0.0 665
MS.gene003702.t1 AT2G21540 61.404 570 183 11 1 563 1 540 0.0 665
MS.gene003702.t1 AT4G36490 60.940 553 185 9 26 565 8 542 0.0 649
MS.gene003702.t1 AT4G39180 58.657 566 198 13 1 554 1 542 0.0 648
MS.gene003702.t1 AT4G39180 58.657 566 197 14 1 554 1 541 0.0 644
MS.gene003702.t1 AT4G39180 58.657 566 197 14 1 554 1 541 0.0 644
MS.gene003702.t1 AT2G18180 61.080 537 182 8 41 565 24 545 0.0 634
MS.gene003702.t1 AT2G18180 60.556 540 180 9 41 565 24 545 0.0 628
MS.gene003702.t1 AT4G34580 59.107 560 199 13 19 563 7 551 0.0 613
MS.gene003702.t1 AT4G34580 59.107 560 199 13 19 563 7 551 0.0 613
MS.gene003702.t1 AT4G39170 55.649 593 207 13 19 563 28 612 0.0 595
MS.gene003702.t1 AT4G39170 55.499 591 209 14 19 563 28 610 0.0 588
MS.gene003702.t1 AT2G21520 53.559 590 223 16 19 558 32 620 0.0 571
MS.gene003702.t1 AT2G21520 53.559 590 223 16 19 558 32 620 0.0 571
MS.gene003702.t1 AT2G21520 53.559 590 223 16 19 558 28 616 0.0 571
MS.gene003702.t1 AT2G18180 60.788 482 158 8 97 565 11 474 0.0 568
MS.gene003702.t1 AT2G18180 60.373 482 160 8 97 565 11 474 0.0 562
MS.gene003702.t1 AT2G16380 51.971 558 235 10 19 563 7 544 0.0 557
MS.gene003702.t1 AT2G16380 51.971 558 235 10 19 563 7 544 0.0 557
MS.gene003702.t1 AT2G18180 60.606 462 157 7 114 565 1 447 0.0 541
MS.gene003702.t1 AT1G19650 48.229 593 252 14 19 565 25 608 1.95e-174 507
MS.gene003702.t1 AT2G16380 51.634 459 193 7 114 563 1 439 3.15e-159 462
MS.gene003702.t1 AT1G19650 68.405 326 99 3 19 341 25 349 6.18e-159 461
MS.gene003702.t1 AT3G24840 46.667 555 244 12 20 549 22 549 2.36e-156 459
MS.gene003702.t1 AT3G24840 46.667 555 244 12 20 549 22 549 2.36e-156 459
MS.gene003702.t1 AT3G24840 46.667 555 244 12 20 549 22 549 2.36e-156 459
MS.gene003702.t1 AT3G24840 46.667 555 244 12 20 549 22 549 2.36e-156 459
MS.gene003702.t1 AT3G24840 46.403 556 245 12 20 549 22 550 1.40e-155 457
MS.gene003702.t1 AT3G24840 46.403 556 245 12 20 549 22 550 1.40e-155 457
MS.gene003702.t1 AT3G24840 46.403 556 245 12 20 549 22 550 1.40e-155 457
MS.gene003702.t1 AT1G19650 48.062 516 217 11 93 565 29 536 2.26e-154 453
MS.gene003702.t1 AT1G75370 68.862 334 96 2 19 344 28 361 3.53e-151 447
MS.gene003702.t1 AT1G75370 68.862 334 96 2 19 344 28 361 2.97e-150 447
MS.gene003702.t1 AT5G56160 38.246 570 311 12 21 561 15 572 1.02e-126 384
MS.gene003702.t1 AT5G56160 38.246 570 311 12 21 561 15 572 1.02e-126 384
MS.gene003702.t1 AT5G56160 54.489 323 142 4 21 338 15 337 7.85e-125 376
MS.gene003702.t1 AT1G55690 56.456 333 138 6 19 344 19 351 4.26e-122 373
MS.gene003702.t1 AT1G55690 56.456 333 138 6 19 344 19 351 8.08e-122 372
MS.gene003702.t1 AT1G55690 56.456 333 138 6 19 344 19 351 8.08e-122 372
MS.gene003702.t1 AT1G55690 56.456 333 138 6 19 344 19 351 8.08e-122 372
MS.gene003702.t1 AT1G55690 56.456 333 138 6 19 344 19 351 8.08e-122 372
MS.gene003702.t1 AT5G47510 51.331 263 128 0 72 334 27 289 4.55e-104 317
MS.gene003702.t1 AT5G47510 51.331 263 128 0 72 334 27 289 9.90e-104 318
MS.gene003702.t1 AT5G47510 51.331 263 128 0 72 334 26 288 1.20e-103 317
MS.gene003702.t1 AT5G47510 53.540 226 105 0 104 329 2 227 1.47e-92 286
MS.gene003702.t1 AT5G47730 28.631 241 157 5 72 303 7 241 1.15e-21 97.1
MS.gene003702.t1 AT5G47730 28.631 241 157 5 72 303 7 241 1.15e-21 97.1
MS.gene003702.t1 AT1G55840 28.230 209 142 3 97 303 12 214 4.84e-19 88.6
MS.gene003702.t1 AT1G55840 28.230 209 142 3 97 303 39 241 5.95e-19 88.6
MS.gene003702.t1 AT1G01630 29.482 251 154 8 57 306 17 245 2.02e-18 85.5
MS.gene003702.t1 AT5G47730 28.646 192 129 3 114 303 1 186 4.26e-17 82.4
MS.gene003702.t1 AT5G47730 28.646 192 129 3 114 303 1 186 4.26e-17 82.4
MS.gene003702.t1 AT1G72160 25.424 236 153 7 87 310 155 379 1.08e-16 83.6
MS.gene003702.t1 AT3G51670 26.271 236 146 8 96 323 84 299 2.80e-13 72.4
MS.gene003702.t1 AT4G09160 25.221 226 146 7 96 310 316 529 1.03e-12 71.2
MS.gene003702.t1 AT4G09160 25.221 226 146 7 96 310 316 529 1.12e-12 71.2
MS.gene003702.t1 AT4G09160 25.221 226 146 7 96 310 341 554 1.32e-12 70.9
MS.gene003702.t1 AT1G14820 26.609 233 154 7 93 323 27 244 8.06e-12 66.2
MS.gene003702.t1 AT1G14820 26.695 236 156 7 90 323 11 231 8.35e-12 65.9
MS.gene003702.t1 AT1G14820 26.695 236 156 7 90 323 11 231 8.35e-12 65.9

Find 122 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTATTGCTACCTTCTTTA+AGG 0.079630 4.1:+32171116 None:intergenic
GAAACTACCTTCAAGATTTC+TGG 0.128425 4.1:+32169620 None:intergenic
CAGAATTATGGCCATGGTTT+TGG 0.149183 4.1:-32168853 MS.gene003702:CDS
ACTATTGATCAACCTGTTAA+AGG 0.167552 4.1:-32171523 MS.gene003702:intron
TCAATGCTGGTTCGGGATTT+AGG 0.174214 4.1:-32170031 MS.gene003702:CDS
TTGAGCAATTCCTCCATTTC+AGG 0.178864 4.1:+32168627 None:intergenic
AGGTCTTGAGATTGAATATT+TGG 0.201747 4.1:-32171166 MS.gene003702:CDS
CTCCAATGGAGGAAGGAATT+TGG 0.285837 4.1:-32170756 MS.gene003702:CDS
CAGTGAACTTCCAGAGTTCT+TGG 0.309109 4.1:-32169708 MS.gene003702:CDS
TTGAGGGTAATAGTTCTTCT+AGG 0.323926 4.1:+32170968 None:intergenic
ACAGGTTGATCAATAGTAAT+AGG 0.325672 4.1:+32171529 None:intergenic
TTCATCATCAATGCTGGTTC+GGG 0.333695 4.1:-32170038 MS.gene003702:CDS
ACCTTCCATGCCACCTGAAA+TGG 0.343417 4.1:-32168640 MS.gene003702:CDS
TAGACTCACTAACCTTTAAC+AGG 0.366985 4.1:+32171511 None:intergenic
GGTATATATTGATGGCAATA+TGG 0.374670 4.1:-32168757 MS.gene003702:CDS
AGAAGGGGCGAAGGCACAAC+AGG 0.395434 4.1:-32171065 MS.gene003702:CDS
TGATGATGAACATACGGTTC+AGG 0.404329 4.1:+32170051 None:intergenic
CCCAACCTTTCTATGTAAAC+AGG 0.413197 4.1:+32170519 None:intergenic
AGTGAACTTCCAGAGTTCTT+GGG 0.420010 4.1:-32169707 MS.gene003702:CDS
TGATCAAAGCACAACTATCT+TGG 0.420976 4.1:-32170367 MS.gene003702:CDS
CACCAAATTCCTTCCTCCAT+TGG 0.428110 4.1:+32170754 None:intergenic
GTTCATCATCAATGCTGGTT+CGG 0.428392 4.1:-32170039 MS.gene003702:CDS
CAACTCCATGTGTTCCTTGA+GGG 0.429365 4.1:+32170556 None:intergenic
TAATTTATTGATCAGGTCCT+AGG 0.431162 4.1:-32169853 MS.gene003702:intron
GGTAATAATGTATGCAAGAC+TGG 0.432081 4.1:-32168897 MS.gene003702:CDS
ACTGATGCAAGTAACGACTA+TGG 0.432973 4.1:-32170478 MS.gene003702:CDS
AATCGATACAGAAGAGTTGC+AGG 0.433152 4.1:-32171019 MS.gene003702:CDS
TTACATAGAAAGGTTGGGTT+TGG 0.438060 4.1:-32170514 MS.gene003702:CDS
ATCAGTACAAAATGATCAAA+AGG 0.448986 4.1:-32169076 MS.gene003702:CDS
TCGAGGTGGTCTTGGGATCA+AGG 0.450087 4.1:+32169982 None:intergenic
GGTAACTCGGTATATATTGA+TGG 0.451076 4.1:-32168765 MS.gene003702:CDS
TCCATTTCAGGTGGCATGGA+AGG 0.453045 4.1:+32168639 None:intergenic
TGATTTCAAGCAACTTGCTC+TGG 0.456669 4.1:+32169821 None:intergenic
CGTTGATGTGCAGATTGCTT+TGG 0.457244 4.1:-32168918 MS.gene003702:intron
GAAGACCTGTTTACATAGAA+AGG 0.458189 4.1:-32170524 MS.gene003702:CDS
ACCTGTTTACATAGAAAGGT+TGG 0.459238 4.1:-32170520 MS.gene003702:CDS
CCTGTTTACATAGAAAGGTT+GGG 0.459264 4.1:-32170519 MS.gene003702:CDS
CAAGGGCTTCAGAAGATTGA+TGG 0.460929 4.1:-32170174 MS.gene003702:CDS
GTTCAAACATTCGTTCAAGA+AGG 0.461666 4.1:-32171082 MS.gene003702:CDS
GTACATGGTACTTAAGATAT+CGG 0.465167 4.1:+32170454 None:intergenic
TTCAAACATTCGTTCAAGAA+GGG 0.478227 4.1:-32171081 MS.gene003702:CDS
GATGAAAAGAAAACAAGGCT+TGG 0.478786 4.1:-32171141 MS.gene003702:CDS
CATCAATCTTCTGAAGCCCT+TGG 0.481135 4.1:+32170175 None:intergenic
ATGACTGCAATTGCATTGTA+TGG 0.483644 4.1:-32168786 MS.gene003702:CDS
TGAATGACAAACAAGCATCT+TGG 0.483911 4.1:-32169104 MS.gene003702:CDS
TTTGCTGCAATTGAACAAGC+AGG 0.492349 4.1:+32170399 None:intergenic
TGCATATCAGTTTGACACCT+TGG 0.493036 4.1:-32169133 MS.gene003702:CDS
ATCATGTGTGACACTATGTC+TGG 0.501849 4.1:-32171553 MS.gene003702:CDS
GATGATGAACATACGGTTCA+GGG 0.502765 4.1:+32170052 None:intergenic
AACCATGGCCATAATTCTGC+CGG 0.506924 4.1:+32168857 None:intergenic
TTCCGGCAGAATTATGGCCA+TGG 0.507474 4.1:-32168859 MS.gene003702:CDS
AAGATTTCTGGATCATTCCA+TGG 0.509508 4.1:+32169632 None:intergenic
TGCTCTGGTATTTGTTACCT+AGG 0.510194 4.1:+32169836 None:intergenic
TGCTTGAAATCATCGATGCC+AGG 0.510523 4.1:-32169810 MS.gene003702:intron
TTCCTCCATTTCAGGTGGCA+TGG 0.511464 4.1:+32168635 None:intergenic
GTTTGTGATTGCAGTTCCAC+TGG 0.517448 4.1:-32168298 MS.gene003702:intron
ACACATGGAGTTGATAAAGA+TGG 0.534479 4.1:-32170546 MS.gene003702:CDS
ATTCACCTTCTCTTCTAGAT+CGG 0.535193 4.1:+32168677 None:intergenic
TCTTGAGATTGAATATTTGG+AGG 0.535896 4.1:-32171163 MS.gene003702:CDS
AGAGTTGGCTACAGCCAAGA+AGG 0.536487 4.1:-32168571 MS.gene003702:intron
GAAATCTTTATCCGATGTTG+AGG 0.544567 4.1:-32169482 MS.gene003702:CDS
ATGATCATCATATGATGCTA+AGG 0.545044 4.1:-32170939 MS.gene003702:intron
ATGAATTAGATGGTTCAAAA+CGG 0.546710 4.1:-32169523 MS.gene003702:intron
CGTATGTTCATCATCAATGC+TGG 0.547791 4.1:-32170044 MS.gene003702:CDS
GTGAACTTCCAGAGTTCTTG+GGG 0.551248 4.1:-32169706 MS.gene003702:CDS
ACAAGCAGGCATCTTAACAT+TGG 0.553424 4.1:+32170413 None:intergenic
TGGTTGCATGCTTTCTGACA+AGG 0.554475 4.1:-32169657 MS.gene003702:CDS
TTTGTCATTCATTGAGACCA+AGG 0.554617 4.1:+32169116 None:intergenic
GTTCTTCTAGGATAAGTGCT+TGG 0.555337 4.1:+32170980 None:intergenic
TCAACTCCATGTGTTCCTTG+AGG 0.555564 4.1:+32170555 None:intergenic
TCTAAACCGTGTCGATACAC+TGG 0.555753 4.1:-32168598 MS.gene003702:CDS
GAATGATCCAGAAATCTTGA+AGG 0.557107 4.1:-32169627 MS.gene003702:intron
CATTTCCGTTGATGATCACA+TGG 0.558838 4.1:-32168718 MS.gene003702:CDS
TCAAACATTCGTTCAAGAAG+GGG 0.560714 4.1:-32171080 MS.gene003702:CDS
TCTTCTCAAACTCTCGTACA+TGG 0.560760 4.1:+32170439 None:intergenic
CGATACACTGGAGCAAGAGT+TGG 0.564279 4.1:-32168586 MS.gene003702:CDS
TGCTTTCTGACAAGGGACCA+TGG 0.567626 4.1:-32169649 MS.gene003702:CDS
TACTACCCTCAAGGAACACA+TGG 0.568354 4.1:-32170561 MS.gene003702:CDS
AATGTAGATTCTTGAGAGCA+AGG 0.568501 4.1:-32170821 MS.gene003702:intron
TTCCATGCCACCTGAAATGG+AGG 0.574584 4.1:-32168637 MS.gene003702:CDS
CAGCATTGATGATGAACATA+CGG 0.574837 4.1:+32170045 None:intergenic
TGATCATCAACGGAAATGAC+AGG 0.575643 4.1:+32168723 None:intergenic
GTTCTAAAATACTACCCTCA+AGG 0.581819 4.1:-32170570 MS.gene003702:CDS
GAAGCTCCACTTGCCTAGCA+AGG 0.584248 4.1:+32168451 None:intergenic
GGTTGCATGCTTTCTGACAA+GGG 0.584666 4.1:-32169656 MS.gene003702:CDS
CATGACCGATCTAGAAGAGA+AGG 0.585875 4.1:-32168682 MS.gene003702:CDS
AGCAATTCCTCCATTTCAGG+TGG 0.586975 4.1:+32168630 None:intergenic
AAGGCTTGGATCCTTAAAGA+AGG 0.587641 4.1:-32171127 MS.gene003702:CDS
CACTTGATGATGCCCTTGCT+AGG 0.595315 4.1:-32168464 MS.gene003702:CDS
AATTGCATTGTATGGTAACT+CGG 0.595923 4.1:-32168778 MS.gene003702:CDS
TGACAAACAAGCATCTTGGA+AGG 0.596415 4.1:-32169100 MS.gene003702:CDS
GGTGGTCTTGGGATCAAGGA+AGG 0.597891 4.1:+32169986 None:intergenic
GCTGCAAGAGATCTCATCCA+AGG 0.597936 4.1:-32170192 MS.gene003702:CDS
CAACAAAGAATATGTTCTCG+AGG 0.598988 4.1:-32169321 MS.gene003702:CDS
TAGAGCCATGTGATCATCAA+CGG 0.599949 4.1:+32168713 None:intergenic
TTGGTATACTCCGTGTCATG+CGG 0.603306 4.1:+32168814 None:intergenic
AAGCTCCACTTGCCTAGCAA+GGG 0.609549 4.1:+32168452 None:intergenic
ACAACTATCTTGGATGTCCA+AGG 0.610723 4.1:-32170357 MS.gene003702:CDS
TGACGTTCATCCGCATGACA+CGG 0.612693 4.1:-32168824 MS.gene003702:CDS
AACTTACTTCTGCAATAGCA+TGG 0.613117 4.1:+32169291 None:intergenic
CTGCAAGAGATCTCATCCAA+GGG 0.614690 4.1:-32170191 MS.gene003702:CDS
TGGTGCTGACACTATCATAG+AGG 0.615880 4.1:-32170736 MS.gene003702:intron
TGTGGGCAGATATGCTCCAA+TGG 0.615883 4.1:-32170770 MS.gene003702:CDS
ATTCGTTCAAGAAGGGGCGA+AGG 0.620764 4.1:-32171074 MS.gene003702:CDS
CCTTAGTAATTAATTACCAG+TGG 0.627692 4.1:+32168282 None:intergenic
ACGGTGAAGCAAAATGCAGA+AGG 0.628053 4.1:-32169504 MS.gene003702:CDS
AGATATGCTCCAATGGAGGA+AGG 0.628811 4.1:-32170763 MS.gene003702:CDS
TGGAGGATGAAAAGAAAACA+AGG 0.629624 4.1:-32171146 MS.gene003702:CDS
AGACGAAGCAGTGTGTCGAA+AGG 0.639350 4.1:-32169443 MS.gene003702:intron
CTTGCTCCAGTGTATCGACA+CGG 0.648033 4.1:+32168592 None:intergenic
TATCTTGGATGTCCAAGGAG+TGG 0.654369 4.1:-32170352 MS.gene003702:intron
ACTTGTACTTGTGCAGACAA+AGG 0.654424 4.1:-32169680 MS.gene003702:CDS
CAAAGAATATGTTCTCGAGG+AGG 0.656459 4.1:-32169318 MS.gene003702:CDS
CGTCATGATTCCCAAAACCA+TGG 0.657898 4.1:+32168842 None:intergenic
TGATGCCCTTGCTAGGCAAG+TGG 0.666904 4.1:-32168457 MS.gene003702:CDS
GAACTTCCAGAGTTCTTGGG+GGG 0.675384 4.1:-32169704 MS.gene003702:CDS
GGGCAGATATGCTCCAATGG+AGG 0.678590 4.1:-32170767 MS.gene003702:CDS
CAGGGTTATATCTGTCATCG+AGG 0.687126 4.1:-32171046 MS.gene003702:CDS
TGAACTTCCAGAGTTCTTGG+GGG 0.688265 4.1:-32169705 MS.gene003702:CDS
TGTACTTGTGCAGACAAAGG+TGG 0.715199 4.1:-32169677 MS.gene003702:CDS
GAAGGGGCGAAGGCACAACA+GGG 0.715484 4.1:-32171064 MS.gene003702:CDS
TGATGGTGACAACTATCCTG+AGG 0.717578 4.1:-32170157 MS.gene003702:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGATGTTCAAATTTA+AGG + chr4.1:32168531-32168550 None:intergenic 15.0%
!! AAAATTGTTGTATAATTAGA+AGG - chr4.1:32170267-32170286 MS.gene003702:intron 15.0%
!! ATATTACTAATTTATTGATC+AGG - chr4.1:32169985-32170004 MS.gene003702:CDS 15.0%
!! TGATCAATAAATTAGTAATA+TGG + chr4.1:32169986-32170005 None:intergenic 15.0%
!!! ATTTATTTGTTCCTTTTTAT+TGG - chr4.1:32171351-32171370 MS.gene003702:intron 15.0%
!!! TTTTAATTTCTGTAAAAAAC+AGG - chr4.1:32168659-32168678 MS.gene003702:CDS 15.0%
!! AAAGAAAAAGAAGAAAAAGT+TGG - chr4.1:32171433-32171452 MS.gene003702:intron 20.0%
!! ATATTTATAGAAACAATGCA+TGG + chr4.1:32171495-32171514 None:intergenic 20.0%
!! GAATATCATAAGAAAAAGAA+AGG + chr4.1:32170488-32170507 None:intergenic 20.0%
!! GTATTAGAATATGAAATTTC+AGG - chr4.1:32168505-32168524 MS.gene003702:intron 20.0%
!! TGAAAAGAAAAATTGAACAA+AGG + chr4.1:32169767-32169786 None:intergenic 20.0%
!! TGACTAACATAAATTTCTTT+CGG - chr4.1:32169215-32169234 MS.gene003702:intron 20.0%
!!! ATTTTTTATGTATGAAGCTA+AGG - chr4.1:32168545-32168564 MS.gene003702:intron 20.0%
!!! TCTTTTTCTTATGATATTCA+GGG - chr4.1:32170489-32170508 MS.gene003702:CDS 20.0%
!!! TTCTTTTTCTTATGATATTC+AGG - chr4.1:32170488-32170507 MS.gene003702:CDS 20.0%
! AACTGTTTAATCAAAGCATA+AGG + chr4.1:32168971-32168990 None:intergenic 25.0%
! ATCAGTACAAAATGATCAAA+AGG - chr4.1:32170769-32170788 MS.gene003702:CDS 25.0%
! ATGAATTAGATGGTTCAAAA+CGG - chr4.1:32170322-32170341 MS.gene003702:intron 25.0%
! ATTTACTATATGAGTCTCAA+GGG + chr4.1:32168935-32168954 None:intergenic 25.0%
! TACAAAATAAAAAGCTTACG+TGG + chr4.1:32169893-32169912 None:intergenic 25.0%
! TATTTACTATATGAGTCTCA+AGG + chr4.1:32168936-32168955 None:intergenic 25.0%
! TGAAAAAACAAAGCAAATGT+GGG - chr4.1:32169058-32169077 MS.gene003702:intron 25.0%
! TGTTAAACAGAAAAACACAA+GGG + chr4.1:32170119-32170138 None:intergenic 25.0%
! TTGAAAAAACAAAGCAAATG+TGG - chr4.1:32169057-32169076 MS.gene003702:intron 25.0%
!! AAAAAGAAGAAAAAGTTGGT+AGG - chr4.1:32171437-32171456 MS.gene003702:intron 25.0%
!! GGATTTAGAAATCAATTTTC+CGG - chr4.1:32170969-32170988 MS.gene003702:CDS 25.0%
!!! AATTTCTTTCGGTTTTGTTA+AGG - chr4.1:32169226-32169245 MS.gene003702:intron 25.0%
!!! TTTTTTCCTGATGAATTAGA+TGG - chr4.1:32170312-32170331 MS.gene003702:intron 25.0%
AAATCTTGAAGGTAGTTTCA+CGG - chr4.1:32170229-32170248 MS.gene003702:intron 30.0%
AAATTGACCATGAAATGCAA+AGG + chr4.1:32168384-32168403 None:intergenic 30.0%
AATTGACCATGAAATGCAAA+GGG + chr4.1:32168383-32168402 None:intergenic 30.0%
AATTGCATTGTATGGTAACT+CGG - chr4.1:32171067-32171086 MS.gene003702:CDS 30.0%
ACTATTGATCAACCTGTTAA+AGG - chr4.1:32168322-32168341 MS.gene003702:intron 30.0%
ACTTATTGCTACCTTCTTTA+AGG + chr4.1:32168732-32168751 None:intergenic 30.0%
AGGTCTTGAGATTGAATATT+TGG - chr4.1:32168679-32168698 MS.gene003702:CDS 30.0%
ATGATCATCATATGATGCTA+AGG - chr4.1:32168906-32168925 MS.gene003702:CDS 30.0%
ATTTCCGATTTCAGTTAAGT+AGG - chr4.1:32169952-32169971 MS.gene003702:intron 30.0%
CTGTTAAACAGAAAAACACA+AGG + chr4.1:32170120-32170139 None:intergenic 30.0%
GAAAGAAGAAAATATAGACC+TGG + chr4.1:32170056-32170075 None:intergenic 30.0%
GTACATGGTACTTAAGATAT+CGG + chr4.1:32169394-32169413 None:intergenic 30.0%
GTTAAACAGAAAAACACAAG+GGG + chr4.1:32170118-32170137 None:intergenic 30.0%
TAAGTACTTACTGTATAGCA+TGG - chr4.1:32169601-32169620 MS.gene003702:intron 30.0%
TAATTTATTGATCAGGTCCT+AGG - chr4.1:32169992-32170011 MS.gene003702:CDS 30.0%
TCTTGAGATTGAATATTTGG+AGG - chr4.1:32168682-32168701 MS.gene003702:CDS 30.0%
TGTTCCTACTTAACTGAAAT+CGG + chr4.1:32169959-32169978 None:intergenic 30.0%
TTCAAACATTCGTTCAAGAA+GGG - chr4.1:32168764-32168783 MS.gene003702:CDS 30.0%
TTCTTTCTCATTGAATAGCA+TGG - chr4.1:32170069-32170088 MS.gene003702:intron 30.0%
TTTGAACCATCTAATTCATC+AGG + chr4.1:32170321-32170340 None:intergenic 30.0%
! ATAGTTTCAAGAGCATAGTT+TGG - chr4.1:32170446-32170465 MS.gene003702:CDS 30.0%
! ATGATGATCATCATGTTTTG+AGG + chr4.1:32168897-32168916 None:intergenic 30.0%
! GGTATATATTGATGGCAATA+TGG - chr4.1:32171088-32171107 MS.gene003702:CDS 30.0%
! TCTTGACTGTGTTGATAAAA+TGG + chr4.1:32170874-32170893 None:intergenic 30.0%
! TGTTAAGGATTTTGAATTCG+AGG - chr4.1:32169241-32169260 MS.gene003702:intron 30.0%
! TGTTCCTTTTTATTGGCATT+AGG - chr4.1:32171358-32171377 MS.gene003702:intron 30.0%
! TTTTACCTACTCAAGCATAT+CGG - chr4.1:32169717-32169736 MS.gene003702:intron 30.0%
! TTTTGATATATACCACTCCT+TGG + chr4.1:32169508-32169527 None:intergenic 30.0%
!! ACAGGTTGATCAATAGTAAT+AGG + chr4.1:32168319-32168338 None:intergenic 30.0%
!! TCATAGAGGTATATTTTCAG+AGG - chr4.1:32169123-32169142 MS.gene003702:CDS 30.0%
!! TGATGATCATCATGTTTTGA+GGG + chr4.1:32168896-32168915 None:intergenic 30.0%
AACTTACTTCTGCAATAGCA+TGG + chr4.1:32170557-32170576 None:intergenic 35.0%
AATGTAGATTCTTGAGAGCA+AGG - chr4.1:32169024-32169043 MS.gene003702:intron 35.0%
ACCTGTTTACATAGAAAGGT+TGG - chr4.1:32169325-32169344 MS.gene003702:CDS 35.0%
AGTGCCTAATGCCAATAAAA+AGG + chr4.1:32171365-32171384 None:intergenic 35.0%
ATGACTGCAATTGCATTGTA+TGG - chr4.1:32171059-32171078 MS.gene003702:CDS 35.0%
ATTCACCTTCTCTTCTAGAT+CGG + chr4.1:32171171-32171190 None:intergenic 35.0%
CAACAAAGAATATGTTCTCG+AGG - chr4.1:32170524-32170543 MS.gene003702:CDS 35.0%
CAACACAGTCAAGAATGAAT+TGG - chr4.1:32170880-32170899 MS.gene003702:intron 35.0%
CAAGAAAAACAGTACCTTCT+TGG + chr4.1:32171291-32171310 None:intergenic 35.0%
CATTATCCCTTTGCATTTCA+TGG - chr4.1:32168374-32168393 MS.gene003702:intron 35.0%
CCTGTTTACATAGAAAGGTT+GGG - chr4.1:32169326-32169345 MS.gene003702:CDS 35.0%
GAAACTACCTTCAAGATTTC+TGG + chr4.1:32170228-32170247 None:intergenic 35.0%
GAAATCTTTATCCGATGTTG+AGG - chr4.1:32170363-32170382 MS.gene003702:CDS 35.0%
GAAGACCTGTTTACATAGAA+AGG - chr4.1:32169321-32169340 MS.gene003702:CDS 35.0%
GAATGATCCAGAAATCTTGA+AGG - chr4.1:32170218-32170237 MS.gene003702:intron 35.0%
GATGAAAAGAAAACAAGGCT+TGG - chr4.1:32168704-32168723 MS.gene003702:CDS 35.0%
GGTAACTCGGTATATATTGA+TGG - chr4.1:32171080-32171099 MS.gene003702:CDS 35.0%
GGTAATAATGTATGCAAGAC+TGG - chr4.1:32170948-32170967 MS.gene003702:CDS 35.0%
GTAGGTAAAAATAGTACCTC+AGG + chr4.1:32169707-32169726 None:intergenic 35.0%
GTTCAAACATTCGTTCAAGA+AGG - chr4.1:32168763-32168782 MS.gene003702:CDS 35.0%
TAGACTCACTAACCTTTAAC+AGG + chr4.1:32168337-32168356 None:intergenic 35.0%
TCAAACATTCGTTCAAGAAG+GGG - chr4.1:32168765-32168784 MS.gene003702:CDS 35.0%
TGAATGACAAACAAGCATCT+TGG - chr4.1:32170741-32170760 MS.gene003702:CDS 35.0%
TGATCAAAGCACAACTATCT+TGG - chr4.1:32169478-32169497 MS.gene003702:CDS 35.0%
TGGAGGATGAAAAGAAAACA+AGG - chr4.1:32168699-32168718 MS.gene003702:CDS 35.0%
TTACATAGAAAGGTTGGGTT+TGG - chr4.1:32169331-32169350 MS.gene003702:CDS 35.0%
TTGAGGGTAATAGTTCTTCT+AGG + chr4.1:32168880-32168899 None:intergenic 35.0%
TTGCTACCTGCAAAATAGAA+GGG + chr4.1:32170682-32170701 None:intergenic 35.0%
TTTGCTACCTGCAAAATAGA+AGG + chr4.1:32170683-32170702 None:intergenic 35.0%
TTTGTCATTCATTGAGACCA+AGG + chr4.1:32170732-32170751 None:intergenic 35.0%
! AAGATTTCTGGATCATTCCA+TGG + chr4.1:32170216-32170235 None:intergenic 35.0%
! AGAATTATGGCCATGGTTTT+GGG - chr4.1:32170993-32171012 MS.gene003702:CDS 35.0%
! GATTGTTTTCTCCTCAACAT+CGG + chr4.1:32170377-32170396 None:intergenic 35.0%
! TCAATTTTCCGGCAGAATTA+TGG - chr4.1:32170980-32170999 MS.gene003702:CDS 35.0%
!! ACACATGGAGTTGATAAAGA+TGG - chr4.1:32169299-32169318 MS.gene003702:CDS 35.0%
!! CAGCATTGATGATGAACATA+CGG + chr4.1:32169803-32169822 None:intergenic 35.0%
!! GTTCTAAAATACTACCCTCA+AGG - chr4.1:32169275-32169294 MS.gene003702:intron 35.0%
AAGGCTTGGATCCTTAAAGA+AGG - chr4.1:32168718-32168737 MS.gene003702:CDS 40.0%
AATCGATACAGAAGAGTTGC+AGG - chr4.1:32168826-32168845 MS.gene003702:CDS 40.0%
ACAACTATCTTGGATGTCCA+AGG - chr4.1:32169488-32169507 MS.gene003702:CDS 40.0%
ACAAGCAGGCATCTTAACAT+TGG + chr4.1:32169435-32169454 None:intergenic 40.0%
ACTGATGCAAGTAACGACTA+TGG - chr4.1:32169367-32169386 MS.gene003702:intron 40.0%
ACTGTATAGCATGGTTGATC+AGG - chr4.1:32169610-32169629 MS.gene003702:intron 40.0%
ACTTGTACTTGTGCAGACAA+AGG - chr4.1:32170165-32170184 MS.gene003702:CDS 40.0%
AGTGAACTTCCAGAGTTCTT+GGG - chr4.1:32170138-32170157 MS.gene003702:intron 40.0%
CAAAGAATATGTTCTCGAGG+AGG - chr4.1:32170527-32170546 MS.gene003702:CDS 40.0%
CAAAGCAATCTGCACATCAA+CGG + chr4.1:32170929-32170948 None:intergenic 40.0%
CCCAACCTTTCTATGTAAAC+AGG + chr4.1:32169329-32169348 None:intergenic 40.0%
CGTATGTTCATCATCAATGC+TGG - chr4.1:32169801-32169820 MS.gene003702:intron 40.0%
CTGTATAGCATGGTTGATCA+GGG - chr4.1:32169611-32169630 MS.gene003702:intron 40.0%
GAAGGGGAATACACAAAAAC+AGG + chr4.1:32170665-32170684 None:intergenic 40.0%
GATGATGAACATACGGTTCA+GGG + chr4.1:32169796-32169815 None:intergenic 40.0%
TAGAGCCATGTGATCATCAA+CGG + chr4.1:32171135-32171154 None:intergenic 40.0%
TCTTCTCAAACTCTCGTACA+TGG + chr4.1:32169409-32169428 None:intergenic 40.0%
TGACAAACAAGCATCTTGGA+AGG - chr4.1:32170745-32170764 MS.gene003702:CDS 40.0%
TGATCATCAACGGAAATGAC+AGG + chr4.1:32171125-32171144 None:intergenic 40.0%
TGCATATCAGTTTGACACCT+TGG - chr4.1:32170712-32170731 MS.gene003702:intron 40.0%
TGCTACCTGCAAAATAGAAG+GGG + chr4.1:32170681-32170700 None:intergenic 40.0%
TTGAACCGATATGCTTGAGT+AGG + chr4.1:32169725-32169744 None:intergenic 40.0%
TTGAGCAATTCCTCCATTTC+AGG + chr4.1:32171221-32171240 None:intergenic 40.0%
TTTGCTGCAATTGAACAAGC+AGG + chr4.1:32169449-32169468 None:intergenic 40.0%
! AAAGCTTACGTGGATTTTCG+AGG + chr4.1:32169883-32169902 None:intergenic 40.0%
! CAGAATTATGGCCATGGTTT+TGG - chr4.1:32170992-32171011 MS.gene003702:CDS 40.0%
! GTATTCCCCTTCTATTTTGC+AGG - chr4.1:32170673-32170692 MS.gene003702:intron 40.0%
! GTTCATCATCAATGCTGGTT+CGG - chr4.1:32169806-32169825 MS.gene003702:intron 40.0%
! TGATGATGAACATACGGTTC+AGG + chr4.1:32169797-32169816 None:intergenic 40.0%
! TGATTTCAAGCAACTTGCTC+TGG + chr4.1:32170027-32170046 None:intergenic 40.0%
! TGCTCTGGTATTTGTTACCT+AGG + chr4.1:32170012-32170031 None:intergenic 40.0%
!! CATTTCCGTTGATGATCACA+TGG - chr4.1:32171127-32171146 MS.gene003702:CDS 40.0%
!! GCAATTGCAGTCATTTTCGT+TGG + chr4.1:32171053-32171072 None:intergenic 40.0%
!! GTTCGGGATTTAGGATTTTG+TGG - chr4.1:32169823-32169842 MS.gene003702:CDS 40.0%
!! GTTCTTCTAGGATAAGTGCT+TGG + chr4.1:32168868-32168887 None:intergenic 40.0%
!! TTCATCATCAATGCTGGTTC+GGG - chr4.1:32169807-32169826 MS.gene003702:intron 40.0%
AACCATGGCCATAATTCTGC+CGG + chr4.1:32170991-32171010 None:intergenic 45.0%
ACGGTGAAGCAAAATGCAGA+AGG - chr4.1:32170341-32170360 MS.gene003702:intron 45.0%
AGATATGCTCCAATGGAGGA+AGG - chr4.1:32169082-32169101 MS.gene003702:CDS 45.0%
AGCAATTCCTCCATTTCAGG+TGG + chr4.1:32171218-32171237 None:intergenic 45.0%
CAACTCCATGTGTTCCTTGA+GGG + chr4.1:32169292-32169311 None:intergenic 45.0%
CAAGGGCTTCAGAAGATTGA+TGG - chr4.1:32169671-32169690 MS.gene003702:CDS 45.0%
CACCAAATTCCTTCCTCCAT+TGG + chr4.1:32169094-32169113 None:intergenic 45.0%
CAGGGTTATATCTGTCATCG+AGG - chr4.1:32168799-32168818 MS.gene003702:CDS 45.0%
CAGTGAACTTCCAGAGTTCT+TGG - chr4.1:32170137-32170156 MS.gene003702:intron 45.0%
CATGACCGATCTAGAAGAGA+AGG - chr4.1:32171163-32171182 MS.gene003702:CDS 45.0%
CGTCATGATTCCCAAAACCA+TGG + chr4.1:32171006-32171025 None:intergenic 45.0%
CGTTGATGTGCAGATTGCTT+TGG - chr4.1:32170927-32170946 MS.gene003702:intron 45.0%
CTCCAATGGAGGAAGGAATT+TGG - chr4.1:32169089-32169108 MS.gene003702:CDS 45.0%
CTGCAAGAGATCTCATCCAA+GGG - chr4.1:32169654-32169673 MS.gene003702:CDS 45.0%
GGTTGCATGCTTTCTGACAA+GGG - chr4.1:32170189-32170208 MS.gene003702:CDS 45.0%
GTGAACTTCCAGAGTTCTTG+GGG - chr4.1:32170139-32170158 MS.gene003702:intron 45.0%
GTTTGTGATTGCAGTTCCAC+TGG - chr4.1:32171547-32171566 MS.gene003702:CDS 45.0%
TACTACCCTCAAGGAACACA+TGG - chr4.1:32169284-32169303 MS.gene003702:intron 45.0%
TATCTTGGATGTCCAAGGAG+TGG - chr4.1:32169493-32169512 MS.gene003702:CDS 45.0%
TCAACTCCATGTGTTCCTTG+AGG + chr4.1:32169293-32169312 None:intergenic 45.0%
TGAACTTCCAGAGTTCTTGG+GGG - chr4.1:32170140-32170159 MS.gene003702:intron 45.0%
TGCTTGAAATCATCGATGCC+AGG - chr4.1:32170035-32170054 MS.gene003702:CDS 45.0%
TGGTTGCATGCTTTCTGACA+AGG - chr4.1:32170188-32170207 MS.gene003702:CDS 45.0%
TGTACTTGTGCAGACAAAGG+TGG - chr4.1:32170168-32170187 MS.gene003702:CDS 45.0%
TTGGTATACTCCGTGTCATG+CGG + chr4.1:32171034-32171053 None:intergenic 45.0%
! TCTAAACCGTGTCGATACAC+TGG - chr4.1:32171247-32171266 MS.gene003702:intron 45.0%
! TGATGGTGACAACTATCCTG+AGG - chr4.1:32169688-32169707 MS.gene003702:CDS 45.0%
!! CATCAATCTTCTGAAGCCCT+TGG + chr4.1:32169673-32169692 None:intergenic 45.0%
!! TCAATGCTGGTTCGGGATTT+AGG - chr4.1:32169814-32169833 MS.gene003702:CDS 45.0%
!! TGGATTTTCGAGGTGGTCTT+GGG + chr4.1:32169873-32169892 None:intergenic 45.0%
!! TGGTGCTGACACTATCATAG+AGG - chr4.1:32169109-32169128 MS.gene003702:CDS 45.0%
AAGCTCCACTTGCCTAGCAA+GGG + chr4.1:32171396-32171415 None:intergenic 50.0%
ACCTTCCATGCCACCTGAAA+TGG - chr4.1:32171205-32171224 MS.gene003702:intron 50.0%
AGACGAAGCAGTGTGTCGAA+AGG - chr4.1:32170402-32170421 MS.gene003702:CDS 50.0%
AGAGTTGGCTACAGCCAAGA+AGG - chr4.1:32171274-32171293 MS.gene003702:intron 50.0%
ATTCGTTCAAGAAGGGGCGA+AGG - chr4.1:32168771-32168790 MS.gene003702:CDS 50.0%
CGATACACTGGAGCAAGAGT+TGG - chr4.1:32171259-32171278 MS.gene003702:intron 50.0%
GAACTTCCAGAGTTCTTGGG+GGG - chr4.1:32170141-32170160 MS.gene003702:intron 50.0%
GCTGCAAGAGATCTCATCCA+AGG - chr4.1:32169653-32169672 MS.gene003702:CDS 50.0%
TGACGTTCATCCGCATGACA+CGG - chr4.1:32171021-32171040 MS.gene003702:CDS 50.0%
TGCTTTCTGACAAGGGACCA+TGG - chr4.1:32170196-32170215 MS.gene003702:CDS 50.0%
TGTGGGCAGATATGCTCCAA+TGG - chr4.1:32169075-32169094 MS.gene003702:CDS 50.0%
TTCCATGCCACCTGAAATGG+AGG - chr4.1:32171208-32171227 MS.gene003702:intron 50.0%
TTCCGGCAGAATTATGGCCA+TGG - chr4.1:32170986-32171005 MS.gene003702:CDS 50.0%
! CTTGCTCCAGTGTATCGACA+CGG + chr4.1:32171256-32171275 None:intergenic 50.0%
! TCCATTTCAGGTGGCATGGA+AGG + chr4.1:32171209-32171228 None:intergenic 50.0%
! TTCCTCCATTTCAGGTGGCA+TGG + chr4.1:32171213-32171232 None:intergenic 50.0%
!! CACTTGATGATGCCCTTGCT+AGG - chr4.1:32171381-32171400 MS.gene003702:intron 50.0%
!! GCTTACGTGGATTTTCGAGG+TGG + chr4.1:32169880-32169899 None:intergenic 50.0%
!! GTGGATTTTCGAGGTGGTCT+TGG + chr4.1:32169874-32169893 None:intergenic 50.0%
CAAGTACCCCCCAAGAACTC+TGG + chr4.1:32170150-32170169 None:intergenic 55.0%
GAAGCTCCACTTGCCTAGCA+AGG + chr4.1:32171397-32171416 None:intergenic 55.0%
GGGCAGATATGCTCCAATGG+AGG - chr4.1:32169078-32169097 MS.gene003702:CDS 55.0%
TGATGCCCTTGCTAGGCAAG+TGG - chr4.1:32171388-32171407 MS.gene003702:intron 55.0%
! GGTGGTCTTGGGATCAAGGA+AGG + chr4.1:32169862-32169881 None:intergenic 55.0%
! TCGAGGTGGTCTTGGGATCA+AGG + chr4.1:32169866-32169885 None:intergenic 55.0%
! AGAAGGGGCGAAGGCACAAC+AGG - chr4.1:32168780-32168799 MS.gene003702:CDS 60.0%
! GAAGGGGCGAAGGCACAACA+GGG - chr4.1:32168781-32168800 MS.gene003702:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 32168295 32171572 32168295 ID=MS.gene003702
chr4.1 mRNA 32168295 32171572 32168295 ID=MS.gene003702.t1;Parent=MS.gene003702
chr4.1 exon 32171524 32171572 32171524 ID=MS.gene003702.t1.exon1;Parent=MS.gene003702.t1
chr4.1 CDS 32171524 32171572 32171524 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32170940 32171186 32170940 ID=MS.gene003702.t1.exon2;Parent=MS.gene003702.t1
chr4.1 CDS 32170940 32171186 32170940 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32170737 32170836 32170737 ID=MS.gene003702.t1.exon3;Parent=MS.gene003702.t1
chr4.1 CDS 32170737 32170836 32170737 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32170353 32170619 32170353 ID=MS.gene003702.t1.exon4;Parent=MS.gene003702.t1
chr4.1 CDS 32170353 32170619 32170353 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32170158 32170235 32170158 ID=MS.gene003702.t1.exon5;Parent=MS.gene003702.t1
chr4.1 CDS 32170158 32170235 32170158 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169974 32170075 32169974 ID=MS.gene003702.t1.exon6;Parent=MS.gene003702.t1
chr4.1 CDS 32169974 32170075 32169974 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169811 32169860 32169811 ID=MS.gene003702.t1.exon7;Parent=MS.gene003702.t1
chr4.1 CDS 32169811 32169860 32169811 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169628 32169727 32169628 ID=MS.gene003702.t1.exon8;Parent=MS.gene003702.t1
chr4.1 CDS 32169628 32169727 32169628 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169444 32169536 32169444 ID=MS.gene003702.t1.exon9;Parent=MS.gene003702.t1
chr4.1 CDS 32169444 32169536 32169444 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169298 32169357 32169298 ID=MS.gene003702.t1.exon10;Parent=MS.gene003702.t1
chr4.1 CDS 32169298 32169357 32169298 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32169064 32169172 32169064 ID=MS.gene003702.t1.exon11;Parent=MS.gene003702.t1
chr4.1 CDS 32169064 32169172 32169064 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32168572 32168927 32168572 ID=MS.gene003702.t1.exon12;Parent=MS.gene003702.t1
chr4.1 CDS 32168572 32168927 32168572 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32168413 32168487 32168413 ID=MS.gene003702.t1.exon13;Parent=MS.gene003702.t1
chr4.1 CDS 32168413 32168487 32168413 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
chr4.1 exon 32168295 32168306 32168295 ID=MS.gene003702.t1.exon14;Parent=MS.gene003702.t1
chr4.1 CDS 32168295 32168306 32168295 ID=cds.MS.gene003702.t1;Parent=MS.gene003702.t1
Gene Sequence

>MS.gene003702

ATGTGTGACACTATGTCTGGACCTATTACTATTGATCAACCTGTTAAAGGTTAGTGAGTCTATGTTATTATTGCAATTTCATTATCCCTTTGCATTTCATGGTCAATTTCTTAAAATTTGTTATTGTTCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTGTATTAGAATATGAAATTTCAGGCCTTAAATTTGAACATCATTTTTTATGTATGAAGCTAAGGAAAATGAAAAAATAGAAAGAAAAAAATTGACACAAAAACAATGTAAATTGAATGCATCTTGTTCAAACTTTTGTTAGTAAGTCTTTTTTTTTTTTAATTTCTGTAAAAAACAGGTCTTGAGATTGAATATTTGGAGGATGAAAAGAAAACAAGGCTTGGATCCTTAAAGAAGGTAGCAATAAGTGCATCTTCTAAGTTCAAACATTCGTTCAAGAAGGGGCGAAGGCACAACAGGGTTATATCTGTCATCGAGGATGAAATCGATACAGAAGAGTTGCAGGCAATTGACGCTTTTCGCCAAGCACTTATCCTAGAAGAACTATTACCCTCAAAACATGATGATCATCATATGATGCTAAGGTAGCCCTTGAGACTCATATAGTAAATAGCTGCAGCATCACCTTATGCTTTGATTAAACAGTTCTTAATGTGCTATTATTAATGTAATTATATGATAATGTAGATTCTTGAGAGCAAGGAAGTTTGACATTGAAAAAACAAAGCAAATGTGGGCAGATATGCTCCAATGGAGGAAGGAATTTGGTGCTGACACTATCATAGAGGTATATTTTCAGAGGAAAATTAAATATAAATTAAGAAAAAACACTAATCATAGTTATATTGTTTTATGCAACATTTTAGTTATGTGACTAACATAAATTTCTTTCGGTTTTGTTAAGGATTTTGAATTCGAGGAGATAGATGAAGTTCTAAAATACTACCCTCAAGGAACACATGGAGTTGATAAAGATGGAAGACCTGTTTACATAGAAAGGTTGGGTTTGGTTGACTCAAACAAACTGATGCAAGTAACGACTATGGACCGATATCTTAAGTACCATGTACGAGAGTTTGAGAAGACATCCAATGTTAAGATGCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATCTTGGATGTCCAAGGAGTGGTATATATCAAAATCATACAACACTAAATAACTTATTATACTTTGTATCATATTATAACTTGTTATATAAGTAAAGAAGTTTCAAATAAGTACTTACTGTATAGCATGGTTGATCAGGGTCTCAAAAGTATGAATAAAGCTGCAAGAGATCTCATCCAAGGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGGTACTATTTTTACCTACTCAAGCATATCGGTTCAAATGTAATCTTCTGACATTACCTTTGTTCAATTTTTCTTTTCATACAGTCCCTGAACCGTATGTTCATCATCAATGCTGGTTCGGGATTTAGGATTTTGTGGAACACTGTTAAGTCCTTCCTTGATCCCAAGACCACCTCGAAAATCCACGTAAGCTTTTTATTTTGTATTTTTTTTTTATATACTTAACAGTTTGAAGTAATGTTGAATTTCCGATTTCAGTTAAGTAGGAACATTAACCATATTACTAATTTATTGATCAGGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATCGATGCCAGGTCTATATTTTCTTCTTTCTCATTGAATAGCATGGCTACTTAGTATTAGTATATTTAACCCCTTGTGTTTTTCTGTTTAACAGTGAACTTCCAGAGTTCTTGGGGGGTACTTGTACTTGTGCAGACAAAGGTGGTTGCATGCTTTCTGACAAGGGACCATGGAATGATCCAGAAATCTTGAAGGTAGTTTCACGGTAGAAAGATAAATAAAAAATTGTTGTATAATTAGAAGGAAAAAAAATAGTGAAGTGTTTTTTTTTTCCTGATGAATTAGATGGTTCAAAACGGTGAAGCAAAATGCAGAAGGAAATCTTTATCCGATGTTGAGGAGAAAACAATCATCGAAGACGAAGCAGTGTGTCGAAAGGTAGTTAACTTCATGCATCTTTATAGTTTCAAGAGCATAGTTTGGTTATGAAACTTGATATCCTTTCTTTTTCTTATGATATTCAGGGATGTGATTCTTTCAACAAAGAATATGTTCTCGAGGAGGCATGCCATGCTATTGCAGAAGTAAGTTCGTAGAACAAGTTTCATTACTTGATGAAATGTAAAACAAATGATGATTTCATATTCATTCGACTCACTTTTAACTGCAAAACTAACCTGTTTTTGTGTATTCCCCTTCTATTTTGCAGGTAGCAAAACAATGTAATGCATATCAGTTTGACACCTTGGTCTCAATGAATGACAAACAAGCATCTTGGAAGGAATCAGTACAAAATGATCAAAAGGCACTTTCTAAAAGTATTTGATACTGTTCTATGATTATTTTTACAGACAAATTTAGTTTGTCAAGCATAATCAGCATACTCCATTTTATCAACACAGTCAAGAATGAATTGGATAAAATACTAAATAGATCATTTCCGTTGATGTGCAGATTGCTTTGGTAATAATGTATGCAAGACTGGATTTAGAAATCAATTTTCCGGCAGAATTATGGCCATGGTTTTGGGAATCATGACGTTCATCCGCATGACACGGAGTATACCAACGAAAATGACTGCAATTGCATTGTATGGTAACTCGGTATATATTGATGGCAATATGGTGAAAGCAGCACCTGTCATTTCCGTTGATGATCACATGGCTCTAATGAAGCGCATGACCGATCTAGAAGAGAAGGTGAATATTCTCAGCATGAGACCTTCCATGCCACCTGAAATGGAGGAATTGCTCAACAGTACTCTAAACCGTGTCGATACACTGGAGCAAGAGTTGGCTACAGCCAAGAAGGTACTGTTTTTCTTGCTACTTCACAATTTTATAATAATTTCAGAACATATTTGTAATTTATTTGTTCCTTTTTATTGGCATTAGGCACTTGATGATGCCCTTGCTAGGCAAGTGGAGCTTCAATCACATATCGACAAAAAGAAAAAGAAGAAAAAGTTGGTAGGTCATTTTAACTTTGACAATGATACATTACTTACCATGCATTGTTTCTATAAATATATACTTTCTTTTTATCTTATACAAGTTTCTGTGTTTGTGATTGCAGTTCCACTGGTAA
Protein sequence

>MS.gene003702.t1

MCDTMSGPITIDQPVKGLEIEYLEDEKKTRLGSLKKVAISASSKFKHSFKKGRRHNRVISVIEDEIDTEELQAIDAFRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLQWRKEFGADTIIEDFEFEEIDEVLKYYPQGTHGVDKDGRPVYIERLGLVDSNKLMQVTTMDRYLKYHVREFEKTSNVKMPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQGLQKIDGDNYPESLNRMFIINAGSGFRILWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEAKCRRKSLSDVEEKTIIEDEAVCRKGCDSFNKEYVLEEACHAIAEVAKQCNAYQFDTLVSMNDKQASWKESVQNDQKALSKNCFGNNVCKTGFRNQFSGRIMAMVLGIMTFIRMTRSIPTKMTAIALYGNSVYIDGNMVKAAPVISVDDHMALMKRMTDLEEKVNILSMRPSMPPEMEELLNSTLNRVDTLEQELATAKKALDDALARQVELQSHIDKKKKKKKLFHW