Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063146.t1 | XP_003603966.1 | 97.7 | 569 | 12 | 1 | 1 | 568 | 1 | 569 | 0.00E+00 | 1095.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063146.t1 | Q93ZE9 | 62.5 | 568 | 191 | 6 | 1 | 566 | 1 | 548 | 1.4e-192 | 674.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063146.t1 | G7J768 | 97.7 | 569 | 12 | 1 | 1 | 568 | 1 | 569 | 0.0e+00 | 1095.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050170 | MS.gene063146 | -0.820023 | 8.54E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene063146 | 0.8117 | 6.14E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene063146 | -0.811379 | 7.21E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene063146 | -0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene050871 | MS.gene063146 | -0.802202 | 6.27E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene063146 | 0.824362 | 8.41E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene063146 | -0.800118 | 1.67E-48 | -1.69E-46 |
| MS.gene053826 | MS.gene063146 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene063146 | -0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene063146 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene063146 | 0.80449 | 2.11E-49 | -1.69E-46 |
| MS.gene056313 | MS.gene063146 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene063146 | -0.804652 | 1.95E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene063146 | 0.827985 | 1.16E-54 | -1.69E-46 |
| MS.gene05726 | MS.gene063146 | 0.824308 | 8.66E-54 | -1.69E-46 |
| MS.gene057499 | MS.gene063146 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene063146 | -0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene063146 | 0.811158 | 8.05E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene063146 | 0.80895 | 2.41E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene063146 | 0.811752 | 5.98E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene063146 | -0.822062 | 2.90E-53 | -1.69E-46 |
| MS.gene059223 | MS.gene063146 | 0.808245 | 3.40E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene063146 | -0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene060187 | MS.gene063146 | 0.842036 | 3.30E-58 | -1.69E-46 |
| MS.gene060593 | MS.gene063146 | 0.817785 | 2.75E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene063146 | 0.829251 | 5.71E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene063146 | -0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene063146 | -0.803426 | 3.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68201 | MS.gene063146 | PPI |
| MS.gene057635 | MS.gene063146 | PPI |
| MS.gene003702 | MS.gene063146 | PPI |
| MS.gene014260 | MS.gene063146 | PPI |
| MS.gene063146 | MS.gene50751 | PPI |
| MS.gene063146 | MS.gene057637 | PPI |
| MS.gene063146 | MS.gene68794 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063146.t1 | MTR_3g117090 | 97.891 | 569 | 11 | 1 | 1 | 568 | 1 | 569 | 0.0 | 1158 |
| MS.gene063146.t1 | MTR_3g117090 | 98.148 | 540 | 10 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1109 |
| MS.gene063146.t1 | MTR_6g015645 | 94.773 | 440 | 18 | 2 | 134 | 568 | 9 | 448 | 0.0 | 855 |
| MS.gene063146.t1 | MTR_4g070720 | 71.701 | 576 | 144 | 12 | 1 | 568 | 1 | 565 | 0.0 | 779 |
| MS.gene063146.t1 | MTR_8g076880 | 58.082 | 563 | 196 | 11 | 25 | 568 | 13 | 554 | 0.0 | 601 |
| MS.gene063146.t1 | MTR_3g117100 | 53.135 | 606 | 219 | 14 | 18 | 568 | 28 | 623 | 0.0 | 592 |
| MS.gene063146.t1 | MTR_4g070810 | 51.262 | 634 | 221 | 14 | 5 | 568 | 1 | 616 | 0.0 | 563 |
| MS.gene063146.t1 | MTR_1g022480 | 51.667 | 600 | 231 | 13 | 18 | 566 | 29 | 620 | 0.0 | 561 |
| MS.gene063146.t1 | MTR_1g022480 | 51.495 | 602 | 231 | 13 | 18 | 566 | 29 | 622 | 0.0 | 560 |
| MS.gene063146.t1 | MTR_1g022480 | 51.071 | 607 | 231 | 14 | 18 | 566 | 29 | 627 | 0.0 | 554 |
| MS.gene063146.t1 | MTR_5g021050 | 72.810 | 331 | 89 | 1 | 31 | 360 | 10 | 340 | 0.0 | 524 |
| MS.gene063146.t1 | MTR_5g021050 | 49.398 | 83 | 41 | 1 | 481 | 562 | 388 | 470 | 1.39e-16 | 83.2 |
| MS.gene063146.t1 | MTR_5g021050 | 72.810 | 331 | 89 | 1 | 31 | 360 | 10 | 340 | 0.0 | 523 |
| MS.gene063146.t1 | MTR_5g021050 | 50.000 | 88 | 42 | 2 | 481 | 566 | 388 | 475 | 6.29e-17 | 84.0 |
| MS.gene063146.t1 | MTR_3g112150 | 48.370 | 583 | 244 | 9 | 20 | 568 | 13 | 572 | 1.52e-174 | 506 |
| MS.gene063146.t1 | MTR_1g022480 | 51.556 | 514 | 194 | 11 | 100 | 566 | 31 | 536 | 2.20e-166 | 484 |
| MS.gene063146.t1 | MTR_7g056587 | 41.017 | 590 | 274 | 11 | 18 | 561 | 18 | 579 | 4.60e-141 | 421 |
| MS.gene063146.t1 | MTR_7g056587 | 40.678 | 590 | 276 | 10 | 18 | 561 | 26 | 587 | 6.41e-141 | 421 |
| MS.gene063146.t1 | MTR_7g056587 | 41.017 | 590 | 274 | 11 | 18 | 561 | 26 | 587 | 1.04e-140 | 421 |
| MS.gene063146.t1 | MTR_7g056587 | 41.017 | 590 | 274 | 11 | 18 | 561 | 40 | 601 | 1.31e-140 | 421 |
| MS.gene063146.t1 | MTR_4g070790 | 59.044 | 293 | 111 | 2 | 69 | 354 | 49 | 339 | 4.30e-125 | 373 |
| MS.gene063146.t1 | MTR_3g010190 | 44.568 | 451 | 229 | 8 | 18 | 447 | 19 | 469 | 1.97e-122 | 371 |
| MS.gene063146.t1 | MTR_8g071000 | 37.847 | 576 | 305 | 12 | 37 | 564 | 33 | 603 | 6.55e-116 | 357 |
| MS.gene063146.t1 | MTR_7g056587 | 65.753 | 219 | 75 | 0 | 115 | 333 | 1 | 219 | 1.05e-110 | 339 |
| MS.gene063146.t1 | MTR_5g012460 | 51.815 | 303 | 144 | 1 | 34 | 336 | 54 | 354 | 5.30e-110 | 336 |
| MS.gene063146.t1 | MTR_4g070780 | 53.214 | 280 | 100 | 4 | 54 | 333 | 20 | 268 | 1.60e-93 | 292 |
| MS.gene063146.t1 | MTR_4g070730 | 52.281 | 285 | 92 | 5 | 57 | 340 | 29 | 270 | 1.72e-92 | 289 |
| MS.gene063146.t1 | MTR_6g034285 | 49.565 | 115 | 50 | 1 | 133 | 239 | 195 | 309 | 2.27e-28 | 117 |
| MS.gene063146.t1 | MTR_3g098530 | 31.984 | 247 | 147 | 9 | 62 | 307 | 36 | 262 | 9.47e-21 | 92.8 |
| MS.gene063146.t1 | MTR_2g027140 | 30.516 | 213 | 132 | 4 | 98 | 304 | 39 | 241 | 7.40e-20 | 91.3 |
| MS.gene063146.t1 | MTR_8g096180 | 33.482 | 224 | 130 | 7 | 90 | 307 | 42 | 252 | 1.89e-19 | 89.0 |
| MS.gene063146.t1 | MTR_3g060670 | 30.144 | 209 | 139 | 3 | 97 | 304 | 33 | 235 | 4.52e-19 | 89.4 |
| MS.gene063146.t1 | MTR_8g096180 | 33.790 | 219 | 126 | 5 | 90 | 307 | 42 | 242 | 4.97e-19 | 87.4 |
| MS.gene063146.t1 | MTR_8g096170 | 32.420 | 219 | 129 | 7 | 90 | 307 | 45 | 245 | 6.00e-18 | 84.3 |
| MS.gene063146.t1 | MTR_7g070480 | 28.444 | 225 | 139 | 7 | 97 | 313 | 100 | 310 | 1.12e-17 | 86.3 |
| MS.gene063146.t1 | MTR_4g013300 | 29.204 | 226 | 137 | 8 | 97 | 313 | 125 | 336 | 6.01e-17 | 84.0 |
| MS.gene063146.t1 | MTR_2g027140 | 30.102 | 196 | 121 | 4 | 115 | 304 | 1 | 186 | 4.31e-15 | 76.3 |
| MS.gene063146.t1 | MTR_8g095360 | 27.064 | 218 | 140 | 6 | 97 | 307 | 181 | 386 | 1.39e-14 | 77.0 |
| MS.gene063146.t1 | MTR_1g032580 | 29.224 | 219 | 135 | 9 | 92 | 307 | 27 | 228 | 5.97e-13 | 69.3 |
| MS.gene063146.t1 | MTR_3g097350 | 29.333 | 225 | 128 | 11 | 97 | 307 | 249 | 456 | 1.97e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063146.t1 | AT2G21540 | 62.676 | 568 | 190 | 6 | 1 | 566 | 1 | 548 | 0.0 | 702 |
| MS.gene063146.t1 | AT2G21540 | 62.676 | 568 | 190 | 6 | 1 | 566 | 1 | 548 | 0.0 | 702 |
| MS.gene063146.t1 | AT2G21540 | 62.676 | 568 | 190 | 6 | 1 | 566 | 1 | 548 | 0.0 | 702 |
| MS.gene063146.t1 | AT2G21540 | 62.676 | 568 | 190 | 6 | 1 | 566 | 1 | 548 | 0.0 | 702 |
| MS.gene063146.t1 | AT2G21540 | 62.148 | 568 | 187 | 5 | 1 | 566 | 1 | 542 | 0.0 | 699 |
| MS.gene063146.t1 | AT2G21540 | 62.148 | 568 | 187 | 5 | 1 | 566 | 1 | 542 | 0.0 | 699 |
| MS.gene063146.t1 | AT4G39180 | 58.645 | 561 | 206 | 9 | 1 | 555 | 1 | 541 | 0.0 | 656 |
| MS.gene063146.t1 | AT4G39180 | 58.645 | 561 | 206 | 9 | 1 | 555 | 1 | 541 | 0.0 | 656 |
| MS.gene063146.t1 | AT4G39180 | 58.467 | 561 | 208 | 9 | 1 | 555 | 1 | 542 | 0.0 | 655 |
| MS.gene063146.t1 | AT4G36490 | 62.230 | 556 | 175 | 13 | 25 | 566 | 8 | 542 | 0.0 | 650 |
| MS.gene063146.t1 | AT4G34580 | 60.823 | 559 | 193 | 11 | 18 | 564 | 7 | 551 | 0.0 | 646 |
| MS.gene063146.t1 | AT4G34580 | 60.823 | 559 | 193 | 11 | 18 | 564 | 7 | 551 | 0.0 | 646 |
| MS.gene063146.t1 | AT2G18180 | 60.323 | 557 | 183 | 12 | 26 | 567 | 13 | 546 | 0.0 | 635 |
| MS.gene063146.t1 | AT2G18180 | 60.252 | 556 | 183 | 12 | 26 | 566 | 13 | 545 | 0.0 | 633 |
| MS.gene063146.t1 | AT4G39170 | 53.445 | 595 | 223 | 11 | 18 | 566 | 28 | 614 | 0.0 | 594 |
| MS.gene063146.t1 | AT4G39170 | 53.367 | 594 | 223 | 12 | 18 | 566 | 28 | 612 | 0.0 | 589 |
| MS.gene063146.t1 | AT2G16380 | 54.145 | 567 | 218 | 11 | 17 | 566 | 6 | 547 | 0.0 | 583 |
| MS.gene063146.t1 | AT2G16380 | 54.145 | 567 | 218 | 11 | 17 | 566 | 6 | 547 | 0.0 | 583 |
| MS.gene063146.t1 | AT2G21520 | 51.071 | 607 | 238 | 14 | 18 | 566 | 32 | 637 | 0.0 | 576 |
| MS.gene063146.t1 | AT2G21520 | 51.071 | 607 | 238 | 14 | 18 | 566 | 32 | 637 | 0.0 | 576 |
| MS.gene063146.t1 | AT2G21520 | 51.071 | 607 | 238 | 14 | 18 | 566 | 28 | 633 | 0.0 | 576 |
| MS.gene063146.t1 | AT2G21520 | 50.729 | 617 | 241 | 14 | 5 | 559 | 1 | 616 | 0.0 | 573 |
| MS.gene063146.t1 | AT2G18180 | 60.331 | 484 | 159 | 9 | 98 | 567 | 11 | 475 | 0.0 | 566 |
| MS.gene063146.t1 | AT2G18180 | 60.248 | 483 | 159 | 9 | 98 | 566 | 11 | 474 | 0.0 | 565 |
| MS.gene063146.t1 | AT2G18180 | 60.086 | 466 | 153 | 9 | 115 | 566 | 1 | 447 | 0.0 | 538 |
| MS.gene063146.t1 | AT1G19650 | 47.973 | 592 | 259 | 12 | 18 | 568 | 25 | 608 | 7.71e-174 | 505 |
| MS.gene063146.t1 | AT2G16380 | 54.390 | 467 | 173 | 9 | 115 | 566 | 1 | 442 | 4.09e-166 | 479 |
| MS.gene063146.t1 | AT1G75370 | 49.663 | 594 | 243 | 14 | 18 | 567 | 28 | 609 | 1.47e-164 | 484 |
| MS.gene063146.t1 | AT1G75370 | 50.084 | 595 | 236 | 15 | 18 | 563 | 28 | 610 | 1.63e-164 | 482 |
| MS.gene063146.t1 | AT1G19650 | 68.224 | 321 | 100 | 2 | 18 | 337 | 25 | 344 | 4.57e-159 | 462 |
| MS.gene063146.t1 | AT3G24840 | 45.931 | 553 | 253 | 11 | 19 | 550 | 22 | 549 | 4.14e-157 | 462 |
| MS.gene063146.t1 | AT3G24840 | 45.931 | 553 | 253 | 11 | 19 | 550 | 22 | 549 | 4.14e-157 | 462 |
| MS.gene063146.t1 | AT3G24840 | 45.931 | 553 | 253 | 11 | 19 | 550 | 22 | 549 | 4.14e-157 | 462 |
| MS.gene063146.t1 | AT3G24840 | 45.931 | 553 | 253 | 11 | 19 | 550 | 22 | 549 | 4.14e-157 | 462 |
| MS.gene063146.t1 | AT3G24840 | 46.029 | 554 | 252 | 10 | 19 | 550 | 22 | 550 | 7.67e-157 | 461 |
| MS.gene063146.t1 | AT3G24840 | 46.029 | 554 | 252 | 10 | 19 | 550 | 22 | 550 | 7.67e-157 | 461 |
| MS.gene063146.t1 | AT3G24840 | 46.029 | 554 | 252 | 10 | 19 | 550 | 22 | 550 | 7.67e-157 | 461 |
| MS.gene063146.t1 | AT1G19650 | 47.554 | 511 | 221 | 10 | 98 | 568 | 33 | 536 | 2.82e-151 | 445 |
| MS.gene063146.t1 | AT5G56160 | 38.732 | 568 | 306 | 15 | 23 | 562 | 19 | 572 | 1.88e-127 | 385 |
| MS.gene063146.t1 | AT5G56160 | 38.732 | 568 | 306 | 15 | 23 | 562 | 19 | 572 | 1.88e-127 | 385 |
| MS.gene063146.t1 | AT1G55690 | 37.439 | 617 | 305 | 13 | 18 | 564 | 19 | 624 | 1.24e-123 | 377 |
| MS.gene063146.t1 | AT1G55690 | 37.439 | 617 | 305 | 13 | 18 | 564 | 19 | 624 | 1.24e-123 | 377 |
| MS.gene063146.t1 | AT1G55690 | 37.439 | 617 | 305 | 13 | 18 | 564 | 19 | 624 | 1.24e-123 | 377 |
| MS.gene063146.t1 | AT1G55690 | 37.439 | 617 | 305 | 13 | 18 | 564 | 19 | 624 | 1.24e-123 | 377 |
| MS.gene063146.t1 | AT1G55690 | 38.294 | 598 | 293 | 12 | 18 | 550 | 19 | 605 | 1.93e-123 | 377 |
| MS.gene063146.t1 | AT5G56160 | 52.848 | 316 | 147 | 2 | 23 | 336 | 19 | 334 | 2.34e-120 | 364 |
| MS.gene063146.t1 | AT5G47510 | 51.685 | 267 | 127 | 1 | 64 | 330 | 20 | 284 | 5.15e-103 | 315 |
| MS.gene063146.t1 | AT5G47510 | 51.685 | 267 | 127 | 1 | 64 | 330 | 19 | 283 | 1.27e-102 | 315 |
| MS.gene063146.t1 | AT5G47510 | 51.685 | 267 | 127 | 1 | 64 | 330 | 20 | 284 | 1.33e-102 | 315 |
| MS.gene063146.t1 | AT5G47510 | 53.097 | 226 | 106 | 0 | 105 | 330 | 2 | 227 | 1.53e-92 | 287 |
| MS.gene063146.t1 | AT5G47730 | 28.631 | 241 | 157 | 5 | 73 | 304 | 7 | 241 | 4.29e-21 | 95.1 |
| MS.gene063146.t1 | AT5G47730 | 28.631 | 241 | 157 | 5 | 73 | 304 | 7 | 241 | 4.29e-21 | 95.1 |
| MS.gene063146.t1 | AT1G55840 | 28.708 | 209 | 141 | 3 | 98 | 304 | 12 | 214 | 4.62e-18 | 85.5 |
| MS.gene063146.t1 | AT1G55840 | 28.708 | 209 | 141 | 3 | 98 | 304 | 39 | 241 | 6.61e-18 | 85.5 |
| MS.gene063146.t1 | AT5G47730 | 29.167 | 192 | 128 | 3 | 115 | 304 | 1 | 186 | 1.45e-16 | 80.9 |
| MS.gene063146.t1 | AT5G47730 | 29.167 | 192 | 128 | 3 | 115 | 304 | 1 | 186 | 1.45e-16 | 80.9 |
| MS.gene063146.t1 | AT1G72160 | 25.309 | 324 | 204 | 10 | 12 | 311 | 70 | 379 | 3.87e-16 | 81.6 |
| MS.gene063146.t1 | AT1G01630 | 30.137 | 219 | 134 | 5 | 90 | 307 | 45 | 245 | 7.51e-16 | 78.2 |
| MS.gene063146.t1 | AT1G75170 | 30.841 | 214 | 120 | 9 | 100 | 307 | 49 | 240 | 3.33e-13 | 70.9 |
| MS.gene063146.t1 | AT1G75170 | 30.841 | 214 | 120 | 9 | 100 | 307 | 49 | 240 | 3.33e-13 | 70.9 |
| MS.gene063146.t1 | AT3G51670 | 26.695 | 236 | 145 | 9 | 97 | 324 | 84 | 299 | 4.31e-12 | 68.6 |
| MS.gene063146.t1 | AT4G09160 | 24.779 | 226 | 147 | 8 | 97 | 311 | 316 | 529 | 1.50e-11 | 67.8 |
| MS.gene063146.t1 | AT4G09160 | 24.779 | 226 | 147 | 8 | 97 | 311 | 316 | 529 | 1.80e-11 | 67.4 |
| MS.gene063146.t1 | AT4G09160 | 24.779 | 226 | 147 | 8 | 97 | 311 | 341 | 554 | 1.98e-11 | 67.4 |
| MS.gene063146.t1 | AT4G36640 | 28.311 | 219 | 131 | 9 | 98 | 311 | 44 | 241 | 6.55e-11 | 63.9 |
| MS.gene063146.t1 | AT4G36640 | 28.311 | 219 | 131 | 9 | 98 | 311 | 44 | 241 | 6.55e-11 | 63.9 |
Find 116 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAAAGCACAACTATTT+TGG | 0.160946 | 3.4:+99567712 | MS.gene063146:CDS |
| TCAATGCTGGTTCTGGATTT+AGG | 0.204254 | 3.4:+99568505 | MS.gene063146:CDS |
| ACAATTTGTTGGTGGAATTA+TGG | 0.206593 | 3.4:+99569907 | MS.gene063146:CDS |
| ATCACAGAAGCAGCACTTTA+TGG | 0.247624 | 3.4:+99569986 | MS.gene063146:CDS |
| CTTAAGTGGAGGAAGGAATT+TGG | 0.250834 | 3.4:+99567292 | MS.gene063146:CDS |
| AAAACTTACACCATAGGATT+TGG | 0.251608 | 3.4:-99569230 | None:intergenic |
| TTCATCATCAATGCTGGTTC+TGG | 0.265601 | 3.4:+99568498 | MS.gene063146:CDS |
| CTTGACCGACCTGTCAAAAT+TGG | 0.280566 | 3.4:+99565782 | MS.gene063146:CDS |
| GACACTTGATGTTCATTGTT+TGG | 0.296140 | 3.4:+99569201 | MS.gene063146:CDS |
| TTGAGGTGGTCTTGGGATCT+AGG | 0.297103 | 3.4:-99568554 | None:intergenic |
| TACTCATTGTTTGAAATTGC+AGG | 0.299234 | 3.4:-99570049 | None:intergenic |
| TGGAATTATGGCACTTGTTA+TGG | 0.309546 | 3.4:+99569919 | MS.gene063146:CDS |
| CAGTGAACTTCCAGAGTTCT+TGG | 0.325219 | 3.4:+99568882 | MS.gene063146:intron |
| ACCTGTTTACATTGAAAGAT+TGG | 0.335171 | 3.4:+99567559 | MS.gene063146:CDS |
| GCTACTTGTCATGCGAATTA+TGG | 0.337136 | 3.4:-99569951 | None:intergenic |
| GATTGTTACTCCAACAATAA+TGG | 0.338457 | 3.4:+99569860 | MS.gene063146:intron |
| AACAATAATGGAATGAATTC+TGG | 0.350361 | 3.4:+99569872 | MS.gene063146:CDS |
| CAAGTTCTACTTGTCGAGTA+AGG | 0.352182 | 3.4:-99570627 | None:intergenic |
| AATTTCAAACAATGAGTATA+TGG | 0.354504 | 3.4:+99570054 | MS.gene063146:CDS |
| TTTCGATGCAGAAGAGTTGC+AGG | 0.364104 | 3.4:+99566353 | MS.gene063146:CDS |
| CCCAATCTTTCAATGTAAAC+AGG | 0.377140 | 3.4:-99567560 | None:intergenic |
| TACACAATAAAAGCTTTATC+CGG | 0.383318 | 3.4:+99569109 | MS.gene063146:CDS |
| AAACTTACACCATAGGATTT+GGG | 0.384470 | 3.4:-99569229 | None:intergenic |
| CAATGAACATCAAGTGTCTC+TGG | 0.400837 | 3.4:-99569196 | None:intergenic |
| TGATGATGAACATACGGTTC+AGG | 0.404329 | 3.4:-99568485 | None:intergenic |
| AGAATTCATTCCATTATTGT+TGG | 0.414930 | 3.4:-99569870 | None:intergenic |
| ATGAATTAGATGGCTCAAAA+TGG | 0.425006 | 3.4:+99569076 | MS.gene063146:intron |
| GGAATTATGGCACTTGTTAT+GGG | 0.425311 | 3.4:+99569920 | MS.gene063146:CDS |
| AGAGTTGGGTGCAACCAAAA+AGG | 0.425560 | 3.4:+99570201 | MS.gene063146:CDS |
| ACTTGTACTTGTGCTGATAA+AGG | 0.426503 | 3.4:+99568910 | MS.gene063146:CDS |
| CCTGTTTACATTGAAAGATT+GGG | 0.431538 | 3.4:+99567560 | MS.gene063146:CDS |
| AAAACTACCTTCAAGATCTC+TGG | 0.441339 | 3.4:-99568970 | None:intergenic |
| CATCCAAAATAGTTGTGCTT+TGG | 0.441578 | 3.4:-99567715 | None:intergenic |
| GTTCTGGATTTAGGCTATTG+TGG | 0.444798 | 3.4:+99568514 | MS.gene063146:CDS |
| CAGAGGCTTCAGAAGATTGA+TGG | 0.450399 | 3.4:+99568076 | MS.gene063146:CDS |
| ACAAAGCAGTTGATTCTTCG+TGG | 0.451912 | 3.4:+99569470 | MS.gene063146:CDS |
| CATCAATCTTCTGAAGCCTC+TGG | 0.457843 | 3.4:-99568075 | None:intergenic |
| CAGTACTCTTGAACAAGAGT+TGG | 0.466343 | 3.4:+99570186 | MS.gene063146:CDS |
| CTAATTGGACTTTAGGCACT+AGG | 0.474315 | 3.4:+99570598 | MS.gene063146:intron |
| TGATTCATTGACCAGGTCCT+AGG | 0.474555 | 3.4:+99568664 | MS.gene063146:intron |
| TACTATCCACAAGGACATCA+TGG | 0.474884 | 3.4:+99567518 | MS.gene063146:CDS |
| AAAAGCTTTATCCGGGGTTG+AGG | 0.482536 | 3.4:+99569117 | MS.gene063146:CDS |
| TGCTTGAAGTCATTGATGCC+AGG | 0.484512 | 3.4:+99568707 | MS.gene063146:CDS |
| TCAACTGCTTTGTCAAGTAC+TGG | 0.487930 | 3.4:-99569460 | None:intergenic |
| TTTGCTGCAATTGAACATGC+AGG | 0.488698 | 3.4:-99567680 | None:intergenic |
| AGGACATCATGGAGTTGATA+AGG | 0.489174 | 3.4:+99567529 | MS.gene063146:CDS |
| AGTGAACTTCCAGAGTTCTT+GGG | 0.490368 | 3.4:+99568883 | MS.gene063146:intron |
| TGACTTCAAGCAACTTGCTC+TGG | 0.490990 | 3.4:-99568696 | None:intergenic |
| TGCTATCTGACAAGGGTCCA+TGG | 0.491415 | 3.4:+99568941 | MS.gene063146:CDS |
| ACTCGACAAGTAGAACTTGA+AGG | 0.493504 | 3.4:+99570631 | MS.gene063146:CDS |
| ATGAGGATCATCATGCTTTG+AGG | 0.497087 | 3.4:-99566421 | None:intergenic |
| ACACAATAAAAGCTTTATCC+GGG | 0.498005 | 3.4:+99569110 | MS.gene063146:CDS |
| GATGATGAACATACGGTTCA+GGG | 0.502765 | 3.4:-99568484 | None:intergenic |
| GGATTTAGCAAACAATTTGT+TGG | 0.503430 | 3.4:+99569896 | MS.gene063146:CDS |
| GCTTACAGTTCCGCTTCCAC+TGG | 0.506676 | 3.4:+99570784 | MS.gene063146:intron |
| TGCTCTGGTATTTGTTACCT+AGG | 0.510194 | 3.4:-99568681 | None:intergenic |
| TTGGATCAACCCAAATCCTA+TGG | 0.511616 | 3.4:+99569220 | MS.gene063146:CDS |
| AATTGCAGGTGCTTTCATCA+TGG | 0.511679 | 3.4:-99570035 | None:intergenic |
| ATTTGGTGCTGACACTATCA+TGG | 0.514322 | 3.4:+99567309 | MS.gene063146:CDS |
| TTTCCTAAAACTTACACCAT+AGG | 0.515333 | 3.4:-99569236 | None:intergenic |
| TTTAGCAAACAATTTGTTGG+TGG | 0.520699 | 3.4:+99569899 | MS.gene063146:CDS |
| ACAGGTCGGTCAAGAGGTGC+GGG | 0.532165 | 3.4:-99565773 | None:intergenic |
| CAAGTACCACCCAAGAACTC+TGG | 0.533812 | 3.4:-99568892 | None:intergenic |
| TGCTTAATAATGCTCTAACC+AGG | 0.535342 | 3.4:+99570161 | MS.gene063146:CDS |
| CCCTCTCAAACTCTCGTACA+TGG | 0.536103 | 3.4:-99567640 | None:intergenic |
| TGAGGATCATCATGCTTTGA+GGG | 0.539591 | 3.4:-99566420 | None:intergenic |
| TGTGGACAGATATGCTTAAG+TGG | 0.542108 | 3.4:+99567278 | MS.gene063146:CDS |
| AAGATCTCTGGATCATTCCA+TGG | 0.542169 | 3.4:-99568958 | None:intergenic |
| TTCAGCCATGCGCTTCATCA+TGG | 0.544493 | 3.4:-99570077 | None:intergenic |
| TGTTACCTTAGCATCATATG+AGG | 0.545245 | 3.4:-99566438 | None:intergenic |
| AAGTTCTACTTGTCGAGTAA+GGG | 0.546049 | 3.4:-99570626 | None:intergenic |
| CGTATGTTCATCATCAATGC+TGG | 0.547791 | 3.4:+99568492 | MS.gene063146:CDS |
| GACAAATACGTGCTTTCGAA+AGG | 0.549204 | 3.4:+99569511 | MS.gene063146:CDS |
| TATCACTTCACCAGTGGAAG+CGG | 0.549222 | 3.4:-99570794 | None:intergenic |
| AGTACTCTTGAACAAGAGTT+GGG | 0.549587 | 3.4:+99570187 | MS.gene063146:CDS |
| GACAGGTCGGTCAAGAGGTG+CGG | 0.549720 | 3.4:-99565774 | None:intergenic |
| AAGGGTTGGGTCTATAAAGA+AGG | 0.550214 | 3.4:+99566239 | MS.gene063146:CDS |
| TTTGTCAAGTACTGGAACAA+AGG | 0.552073 | 3.4:-99569452 | None:intergenic |
| ATGATCCTCATATGATGCTA+AGG | 0.554588 | 3.4:+99566433 | MS.gene063146:CDS |
| AGAAGAAACTGCATATCAGA+AGG | 0.555317 | 3.4:+99569156 | MS.gene063146:CDS |
| AGTTATGTCTATCTGTATTG+AGG | 0.566228 | 3.4:+99566326 | MS.gene063146:CDS |
| CATCATGGAGTTGATAAGGA+TGG | 0.566925 | 3.4:+99567533 | MS.gene063146:CDS |
| AAGTATGAACAAAGCTGCAA+GGG | 0.567227 | 3.4:+99568045 | MS.gene063146:CDS |
| CAGCATTGATGATGAACATA+CGG | 0.574837 | 3.4:-99568491 | None:intergenic |
| GAATGATCCAGAGATCTTGA+AGG | 0.575374 | 3.4:+99568963 | MS.gene063146:CDS |
| GAAGTATGAACAAAGCTGCA+AGG | 0.578601 | 3.4:+99568044 | MS.gene063146:CDS |
| TAGATGGCTCAAAATGGTGT+TGG | 0.582857 | 3.4:+99569082 | MS.gene063146:intron |
| GGCAACTCAGTGTATTATGA+TGG | 0.587600 | 3.4:+99570010 | MS.gene063146:CDS |
| TGTAAACAAAGGTCATGAGA+TGG | 0.590589 | 3.4:+99566191 | MS.gene063146:intron |
| TCAACTCCATGATGTCCTTG+TGG | 0.593727 | 3.4:-99567524 | None:intergenic |
| GCTTAATAATGCTCTAACCA+GGG | 0.597448 | 3.4:+99570162 | MS.gene063146:CDS |
| CGTAATTATCACTTCACCAG+TGG | 0.606803 | 3.4:-99570800 | None:intergenic |
| AATAATGGAATGAATTCTGG+TGG | 0.608682 | 3.4:+99569875 | MS.gene063146:CDS |
| CAATCTTCTGAAGCCTCTGG+AGG | 0.609585 | 3.4:-99568072 | None:intergenic |
| ACCATGTACGAGAGTTTGAG+AGG | 0.609926 | 3.4:+99567639 | MS.gene063146:CDS |
| TAGAGAAAACAAAACAAATG+TGG | 0.610144 | 3.4:+99567260 | MS.gene063146:CDS |
| CACAATAAAAGCTTTATCCG+GGG | 0.611558 | 3.4:+99569111 | MS.gene063146:CDS |
| AGATATGCTTAAGTGGAGGA+AGG | 0.618590 | 3.4:+99567285 | MS.gene063146:CDS |
| TCATGAGATGGAACATTCCG+AGG | 0.620868 | 3.4:+99566203 | MS.gene063146:CDS |
| GAAGAAACTGCATATCAGAA+GGG | 0.622435 | 3.4:+99569157 | MS.gene063146:CDS |
| TGGATGCATGCTATCTGACA+AGG | 0.622907 | 3.4:+99568933 | MS.gene063146:CDS |
| CTGCAAGGGATCTCCTCCAG+AGG | 0.649316 | 3.4:+99568059 | MS.gene063146:CDS |
| TGTACTTGTGCTGATAAAGG+TGG | 0.649664 | 3.4:+99568913 | MS.gene063146:CDS |
| GCATGACAAGTAGCATGCCA+AGG | 0.652880 | 3.4:+99569960 | MS.gene063146:CDS |
| GAACTTCCAGAGTTCTTGGG+TGG | 0.657539 | 3.4:+99568886 | MS.gene063146:CDS |
| GGTTGGGTCTATAAAGAAGG+TGG | 0.673399 | 3.4:+99566242 | MS.gene063146:CDS |
| CCATGTACGAGAGTTTGAGA+GGG | 0.676404 | 3.4:+99567640 | MS.gene063146:CDS |
| GTTGTTGCAAGTAACATCAG+TGG | 0.679229 | 3.4:+99567601 | MS.gene063146:CDS |
| ACAGAAGCAGCACTTTATGG+TGG | 0.688016 | 3.4:+99569989 | MS.gene063146:CDS |
| TTGTTCAAGAGTACTGACCC+TGG | 0.690391 | 3.4:-99570179 | None:intergenic |
| GGACAGATATGCTTAAGTGG+AGG | 0.704066 | 3.4:+99567281 | MS.gene063146:CDS |
| GTTCTAAAATACTATCCACA+AGG | 0.704171 | 3.4:+99567509 | MS.gene063146:CDS |
| GGATGCATGCTATCTGACAA+GGG | 0.704740 | 3.4:+99568934 | MS.gene063146:CDS |
| TGATGGTGACAACTATCCTG+AGG | 0.705159 | 3.4:+99568093 | MS.gene063146:CDS |
| TATGGCCATGATGAAGCGCA+TGG | 0.713241 | 3.4:+99570072 | MS.gene063146:CDS |
| TGGTGCTGACACTATCATGG+AGG | 0.730519 | 3.4:+99567312 | MS.gene063146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTATTTTATTTTTT+TGG | - | chr3.4:99566137-99566156 | None:intergenic | 0.0% |
| !!! | ATTTTTTATTTATTTTTTTT+AGG | + | chr3.4:99567368-99567387 | MS.gene063146:intron | 0.0% |
| !!! | TTTTTATTTATTTTTAATAA+TGG | - | chr3.4:99569826-99569845 | None:intergenic | 0.0% |
| !!! | TTTTTTATTTATTTTTTTTA+GGG | + | chr3.4:99567369-99567388 | MS.gene063146:intron | 0.0% |
| !! | TTTATTACAAGTTATTATTA+CGG | + | chr3.4:99567940-99567959 | MS.gene063146:intron | 10.0% |
| !!! | AAAAATCAATGAATTTTATA+AGG | - | chr3.4:99568801-99568820 | None:intergenic | 10.0% |
| !!! | ATGATTTATTTATTTTTCAT+TGG | - | chr3.4:99567344-99567363 | None:intergenic | 10.0% |
| !! | AGCTTATAAGTATATAAAAA+TGG | - | chr3.4:99569644-99569663 | None:intergenic | 15.0% |
| !! | TTAAAAATATTATGTCACAA+AGG | - | chr3.4:99569016-99569035 | None:intergenic | 15.0% |
| !! | TTTCATTAACTAATGAAATT+TGG | - | chr3.4:99569358-99569377 | None:intergenic | 15.0% |
| !!! | AAATAGTTTTTTCTTCTAAT+TGG | - | chr3.4:99567808-99567827 | None:intergenic | 15.0% |
| !!! | AAATTTAAGATAAACAAACA+AGG | - | chr3.4:99569269-99569288 | None:intergenic | 15.0% |
| !!! | AACACACAATATTTTAAAAA+AGG | - | chr3.4:99569412-99569431 | None:intergenic | 15.0% |
| !!! | ATTGCTTCTTTATTTTATTT+TGG | + | chr3.4:99570231-99570250 | MS.gene063146:intron | 15.0% |
| !!! | TGATTTTGTAAAATAGATTT+TGG | - | chr3.4:99567045-99567064 | None:intergenic | 15.0% |
| !!! | TTCTATGTTATTTATTGATA+AGG | + | chr3.4:99566099-99566118 | MS.gene063146:intron | 15.0% |
| !!! | TTGCTTCTTTATTTTATTTT+GGG | + | chr3.4:99570232-99570251 | MS.gene063146:intron | 15.0% |
| !!! | TTTTTTTATCAATTGATGTT+TGG | - | chr3.4:99566893-99566912 | None:intergenic | 15.0% |
| !! | AAAAATTCATTCACCAAAAA+GGG | + | chr3.4:99566288-99566307 | MS.gene063146:CDS | 20.0% |
| !! | AATTTACTAATTAGCATGAT+TGG | + | chr3.4:99568007-99568026 | MS.gene063146:intron | 20.0% |
| !! | AATTTCAAACAATGAGTATA+TGG | + | chr3.4:99570054-99570073 | MS.gene063146:CDS | 20.0% |
| !! | ATAAGGTAATTATATTTCCT+TGG | + | chr3.4:99569053-99569072 | MS.gene063146:intron | 20.0% |
| !! | ATAGTTAGTTAATGAATATC+AGG | + | chr3.4:99568204-99568223 | MS.gene063146:intron | 20.0% |
| !! | GAAACTTGAATCAATTATAA+AGG | - | chr3.4:99566542-99566561 | None:intergenic | 20.0% |
| !! | GAATCAATTCTCAAATTTAT+TGG | + | chr3.4:99566579-99566598 | MS.gene063146:intron | 20.0% |
| !! | TAAAGCAAAGAAAAACAATA+AGG | + | chr3.4:99569036-99569055 | MS.gene063146:intron | 20.0% |
| !! | TAATCATGAACTATTCTATA+TGG | + | chr3.4:99565895-99565914 | MS.gene063146:intron | 20.0% |
| !! | TGAAATGTTAATGTTATGAT+TGG | + | chr3.4:99565942-99565961 | MS.gene063146:intron | 20.0% |
| !! | TTAACACCTAATAAAAACTA+TGG | + | chr3.4:99568320-99568339 | MS.gene063146:intron | 20.0% |
| !! | TTCACAAACTTTACTTTATT+TGG | + | chr3.4:99570756-99570775 | MS.gene063146:intron | 20.0% |
| !! | TTCTAATTGTTATGTTCATA+TGG | + | chr3.4:99567969-99567988 | MS.gene063146:intron | 20.0% |
| !! | TTTATGGTAACTATCATTTA+AGG | - | chr3.4:99567836-99567855 | None:intergenic | 20.0% |
| !! | TTTATTGATAAGGTAAAAGT+TGG | + | chr3.4:99566109-99566128 | MS.gene063146:intron | 20.0% |
| !!! | AAATCGATTCTCAAATTTAT+TGG | + | chr3.4:99566857-99566876 | MS.gene063146:intron | 20.0% |
| !!! | ATTTGATTTCAATGGTATAA+TGG | + | chr3.4:99567182-99567201 | MS.gene063146:intron | 20.0% |
| !!! | GATATAATTGATTTTGAAAC+TGG | - | chr3.4:99566804-99566823 | None:intergenic | 20.0% |
| !!! | TAGCTTTTGCAAAATAAAAT+TGG | + | chr3.4:99570415-99570434 | MS.gene063146:intron | 20.0% |
| !!! | TATTTTAAAAAAGGTAGCAA+TGG | - | chr3.4:99569403-99569422 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTCTTGTAAACAA+AGG | + | chr3.4:99566180-99566199 | MS.gene063146:intron | 20.0% |
| !!! | TTTTGCAAAATAAAATTGGT+TGG | + | chr3.4:99570419-99570438 | MS.gene063146:intron | 20.0% |
| !!! | TTTTGGTTTAAATCAAATCA+AGG | - | chr3.4:99567028-99567047 | None:intergenic | 20.0% |
| ! | AAAATTCATTCACCAAAAAG+GGG | + | chr3.4:99566289-99566308 | MS.gene063146:CDS | 25.0% |
| ! | AAACTACTTACACATTTCTA+TGG | + | chr3.4:99568597-99568616 | MS.gene063146:intron | 25.0% |
| ! | AAAGAAAAAGAAGAAGAAGT+TGG | + | chr3.4:99570666-99570685 | MS.gene063146:CDS | 25.0% |
| ! | AAGCCAAACATAACAATTTA+CGG | - | chr3.4:99566763-99566782 | None:intergenic | 25.0% |
| ! | AATAAACATTATTGCCTTGT+TGG | - | chr3.4:99567926-99567945 | None:intergenic | 25.0% |
| ! | AATAAGATGAAAACAGCTTA+TGG | + | chr3.4:99569696-99569715 | MS.gene063146:intron | 25.0% |
| ! | AATCATTTCTCTTCTATCTT+AGG | + | chr3.4:99568399-99568418 | MS.gene063146:intron | 25.0% |
| ! | ACTTTCATGAAAACGTAAAT+TGG | - | chr3.4:99568356-99568375 | None:intergenic | 25.0% |
| ! | AGAATTCATTCCATTATTGT+TGG | - | chr3.4:99569873-99569892 | None:intergenic | 25.0% |
| ! | AGATGAATGCTTAAGATATA+TGG | + | chr3.4:99569299-99569318 | MS.gene063146:intron | 25.0% |
| ! | ATAAGCATTTATGCTATAAG+TGG | - | chr3.4:99569565-99569584 | None:intergenic | 25.0% |
| ! | ATACCATTGAAATCAAATCA+AGG | - | chr3.4:99567180-99567199 | None:intergenic | 25.0% |
| ! | ATCCAATTTGGTTAGATTTA+TGG | - | chr3.4:99567852-99567871 | None:intergenic | 25.0% |
| ! | ATGAAAAAAAGAAAAGGGTT+GGG | + | chr3.4:99566226-99566245 | MS.gene063146:CDS | 25.0% |
| ! | ATTTGAACACATGATAATTG+TGG | - | chr3.4:99568289-99568308 | None:intergenic | 25.0% |
| ! | CAAAAATTCATTCACCAAAA+AGG | + | chr3.4:99566287-99566306 | MS.gene063146:CDS | 25.0% |
| ! | CAATTTGAAGACTAAATTGA+TGG | - | chr3.4:99570273-99570292 | None:intergenic | 25.0% |
| ! | CTTCTAATTGGTTATTCTTT+AGG | - | chr3.4:99567796-99567815 | None:intergenic | 25.0% |
| ! | GCCTATTATAAAAATGTACT+GGG | + | chr3.4:99566051-99566070 | MS.gene063146:intron | 25.0% |
| ! | TAAGGAAGAATTAAGTTTAC+CGG | - | chr3.4:99568783-99568802 | None:intergenic | 25.0% |
| ! | TACCATAAATCTAACCAAAT+TGG | + | chr3.4:99567847-99567866 | MS.gene063146:intron | 25.0% |
| ! | TAGAGAAAACAAAACAAATG+TGG | + | chr3.4:99567260-99567279 | MS.gene063146:CDS | 25.0% |
| ! | TCTAGCAACGAAAAATAAAT+TGG | - | chr3.4:99570307-99570326 | None:intergenic | 25.0% |
| ! | TGCCTATTATAAAAATGTAC+TGG | + | chr3.4:99566050-99566069 | MS.gene063146:intron | 25.0% |
| ! | TGGAAAGAAAAGTTCAATTA+GGG | - | chr3.4:99568458-99568477 | None:intergenic | 25.0% |
| ! | TTAAGATAAACAAACAAGGA+AGG | - | chr3.4:99569265-99569284 | None:intergenic | 25.0% |
| ! | TTTATGTCTGAATAGTAGTT+TGG | - | chr3.4:99566635-99566654 | None:intergenic | 25.0% |
| !! | AACAATAATGGAATGAATTC+TGG | + | chr3.4:99569872-99569891 | MS.gene063146:CDS | 25.0% |
| !! | AATTAGCATGATTGGTAATT+AGG | + | chr3.4:99568015-99568034 | MS.gene063146:intron | 25.0% |
| !! | AGTCAACCATAGTTTTTATT+AGG | - | chr3.4:99568329-99568348 | None:intergenic | 25.0% |
| !! | ATACCTTGATTTGATTTCAA+TGG | + | chr3.4:99567174-99567193 | MS.gene063146:intron | 25.0% |
| !! | ATTAGCATGATTGGTAATTA+GGG | + | chr3.4:99568016-99568035 | MS.gene063146:intron | 25.0% |
| !! | TACACAATAAAAGCTTTATC+CGG | + | chr3.4:99569109-99569128 | MS.gene063146:CDS | 25.0% |
| !! | TCCCAGTACATTTTTATAAT+AGG | - | chr3.4:99566055-99566074 | None:intergenic | 25.0% |
| !! | TTTAAAATATTGTGTGTTGC+AGG | + | chr3.4:99569414-99569433 | MS.gene063146:intron | 25.0% |
| !! | TTTTAGATACTAAGCACATA+GGG | + | chr3.4:99570352-99570371 | MS.gene063146:intron | 25.0% |
| !! | TTTTTAGATACTAAGCACAT+AGG | + | chr3.4:99570351-99570370 | MS.gene063146:intron | 25.0% |
| !!! | GCTTGTTTTGTTTTTCTATA+AGG | + | chr3.4:99567460-99567479 | MS.gene063146:intron | 25.0% |
| !!! | TTTAGTTAACTTGTTAAGCA+AGG | + | chr3.4:99568626-99568645 | MS.gene063146:intron | 25.0% |
| !!! | TTTGTTTTGTACTAGCTAAA+AGG | + | chr3.4:99565919-99565938 | MS.gene063146:intron | 25.0% |
| AAAACTTACACCATAGGATT+TGG | - | chr3.4:99569233-99569252 | None:intergenic | 30.0% | |
| AAACTTACACCATAGGATTT+GGG | - | chr3.4:99569232-99569251 | None:intergenic | 30.0% | |
| AAGTTCAATTAGGGTGAATT+TGG | - | chr3.4:99568449-99568468 | None:intergenic | 30.0% | |
| AATAACATAGAATGCAAGAC+AGG | - | chr3.4:99566091-99566110 | None:intergenic | 30.0% | |
| AATGAATTTGACTCCCTAAT+TGG | + | chr3.4:99570583-99570602 | MS.gene063146:intron | 30.0% | |
| ACATTAATGATTCATTGACC+AGG | + | chr3.4:99568657-99568676 | MS.gene063146:intron | 30.0% | |
| ACCTGTTTACATTGAAAGAT+TGG | + | chr3.4:99567559-99567578 | MS.gene063146:CDS | 30.0% | |
| AGTTATGTCTATCTGTATTG+AGG | + | chr3.4:99566326-99566345 | MS.gene063146:CDS | 30.0% | |
| ATGAATTAGATGGCTCAAAA+TGG | + | chr3.4:99569076-99569095 | MS.gene063146:intron | 30.0% | |
| ATTAGGTGTTAAACTACATG+TGG | - | chr3.4:99568312-99568331 | None:intergenic | 30.0% | |
| ATTTCCTTGGATGAATTAGA+TGG | + | chr3.4:99569066-99569085 | MS.gene063146:intron | 30.0% | |
| CAAATCTCATCAACCATTAA+TGG | + | chr3.4:99568230-99568249 | MS.gene063146:intron | 30.0% | |
| CATGAAAGTTGTCAAAAACA+AGG | + | chr3.4:99568367-99568386 | MS.gene063146:intron | 30.0% | |
| CCTGTTTACATTGAAAGATT+GGG | + | chr3.4:99567560-99567579 | MS.gene063146:CDS | 30.0% | |
| CGAGGATGAAAAAAAGAAAA+GGG | + | chr3.4:99566221-99566240 | MS.gene063146:CDS | 30.0% | |
| CTTAAGATATATGGCACAAT+TGG | + | chr3.4:99569308-99569327 | MS.gene063146:intron | 30.0% | |
| GATGAAAAAAAGAAAAGGGT+TGG | + | chr3.4:99566225-99566244 | MS.gene063146:CDS | 30.0% | |
| GATTGTTACTCCAACAATAA+TGG | + | chr3.4:99569860-99569879 | MS.gene063146:intron | 30.0% | |
| GGATTTAGCAAACAATTTGT+TGG | + | chr3.4:99569896-99569915 | MS.gene063146:CDS | 30.0% | |
| GTAGAAATGAAAGAACGAAA+TGG | - | chr3.4:99569804-99569823 | None:intergenic | 30.0% | |
| GTAGTTTGAAAATGCTTACA+TGG | - | chr3.4:99568584-99568603 | None:intergenic | 30.0% | |
| GTGGAAAGAAAAGTTCAATT+AGG | - | chr3.4:99568459-99568478 | None:intergenic | 30.0% | |
| TCATACTTGACCAATTCTAA+AGG | - | chr3.4:99566488-99566507 | None:intergenic | 30.0% | |
| TCTAATTCTGCTTGAAAAGA+AGG | - | chr3.4:99569335-99569354 | None:intergenic | 30.0% | |
| TGGATAAATCAATATACCTC+AGG | - | chr3.4:99568112-99568131 | None:intergenic | 30.0% | |
| TGTCCGTAAATTGTTATGTT+TGG | + | chr3.4:99566757-99566776 | MS.gene063146:intron | 30.0% | |
| TGTTCTTATAACACAACTGA+TGG | - | chr3.4:99568132-99568151 | None:intergenic | 30.0% | |
| TTTCCTAAAACTTACACCAT+AGG | - | chr3.4:99569239-99569258 | None:intergenic | 30.0% | |
| ! | AAGCAATACTAGTACCTTTT+TGG | - | chr3.4:99570218-99570237 | None:intergenic | 30.0% |
| ! | AATAATGGAATGAATTCTGG+TGG | + | chr3.4:99569875-99569894 | MS.gene063146:CDS | 30.0% |
| ! | AATCCTATGGTGTAAGTTTT+AGG | + | chr3.4:99569233-99569252 | MS.gene063146:intron | 30.0% |
| ! | AATGCTTACATGGATTTTTG+AGG | - | chr3.4:99568574-99568593 | None:intergenic | 30.0% |
| ! | ACACAATAAAAGCTTTATCC+GGG | + | chr3.4:99569110-99569129 | MS.gene063146:CDS | 30.0% |
| ! | ACGCTAATTTTCAATGAGAA+AGG | - | chr3.4:99568745-99568764 | None:intergenic | 30.0% |
| ! | ACTTAAACGCAAACACTTTT+AGG | - | chr3.4:99569588-99569607 | None:intergenic | 30.0% |
| ! | CTATAAGGATTTTGAATTCG+AGG | + | chr3.4:99567475-99567494 | MS.gene063146:intron | 30.0% |
| ! | GAAAGGAGATAAATTTTACC+TGG | - | chr3.4:99568728-99568747 | None:intergenic | 30.0% |
| ! | TACTCATTGTTTGAAATTGC+AGG | - | chr3.4:99570052-99570071 | None:intergenic | 30.0% |
| ! | TTAAGCATTTCCTCTTTTTC+AGG | - | chr3.4:99570148-99570167 | None:intergenic | 30.0% |
| !! | ACAATTTGTTGGTGGAATTA+TGG | + | chr3.4:99569907-99569926 | MS.gene063146:CDS | 30.0% |
| !! | CATGTTTGTACCTTTAGAAT+TGG | + | chr3.4:99566475-99566494 | MS.gene063146:intron | 30.0% |
| !! | CCTTTTCTTTTTTTCATCCT+CGG | - | chr3.4:99566223-99566242 | None:intergenic | 30.0% |
| !! | GTTCTAAAATACTATCCACA+AGG | + | chr3.4:99567509-99567528 | MS.gene063146:CDS | 30.0% |
| !! | TTTAGCAAACAATTTGTTGG+TGG | + | chr3.4:99569899-99569918 | MS.gene063146:CDS | 30.0% |
| AAAAAAGGTAGCAATGGAGT+TGG | - | chr3.4:99569397-99569416 | None:intergenic | 35.0% | |
| AAAACTACCTTCAAGATCTC+TGG | - | chr3.4:99568973-99568992 | None:intergenic | 35.0% | |
| AAATGCATACTATACTCTGC+AGG | + | chr3.4:99565848-99565867 | MS.gene063146:intron | 35.0% | |
| AAGTATGAACAAAGCTGCAA+GGG | + | chr3.4:99568045-99568064 | MS.gene063146:CDS | 35.0% | |
| AAGTTCTACTTGTCGAGTAA+GGG | - | chr3.4:99570629-99570648 | None:intergenic | 35.0% | |
| ACATAATCGAACAAGAGGAT+AGG | + | chr3.4:99567098-99567117 | MS.gene063146:intron | 35.0% | |
| AGAAGAAACTGCATATCAGA+AGG | + | chr3.4:99569156-99569175 | MS.gene063146:CDS | 35.0% | |
| AGGCATGGCAATAGTTTAAA+TGG | + | chr3.4:99568419-99568438 | MS.gene063146:intron | 35.0% | |
| AGTACTCTTGAACAAGAGTT+GGG | + | chr3.4:99570187-99570206 | MS.gene063146:CDS | 35.0% | |
| ATGATCCTCATATGATGCTA+AGG | + | chr3.4:99566433-99566452 | MS.gene063146:CDS | 35.0% | |
| CATAATCGAACAAGAGGATA+GGG | + | chr3.4:99567099-99567118 | MS.gene063146:intron | 35.0% | |
| CATCCAAAATAGTTGTGCTT+TGG | - | chr3.4:99567718-99567737 | None:intergenic | 35.0% | |
| CCCAATCTTTCAATGTAAAC+AGG | - | chr3.4:99567563-99567582 | None:intergenic | 35.0% | |
| CCGAGGATGAAAAAAAGAAA+AGG | + | chr3.4:99566220-99566239 | MS.gene063146:CDS | 35.0% | |
| GAAGAAACTGCATATCAGAA+GGG | + | chr3.4:99569157-99569176 | MS.gene063146:CDS | 35.0% | |
| GACACTTGATGTTCATTGTT+TGG | + | chr3.4:99569201-99569220 | MS.gene063146:CDS | 35.0% | |
| GCTAAGGTAACATTTGTGTT+TGG | + | chr3.4:99566449-99566468 | MS.gene063146:intron | 35.0% | |
| GCTTAATAATGCTCTAACCA+GGG | + | chr3.4:99570162-99570181 | MS.gene063146:CDS | 35.0% | |
| TAACTCAAACGCGATTCTAA+AGG | - | chr3.4:99566724-99566743 | None:intergenic | 35.0% | |
| TAGTGCCTAAAGTCCAATTA+GGG | - | chr3.4:99570599-99570618 | None:intergenic | 35.0% | |
| TCATCACATAATCGAACAAG+AGG | + | chr3.4:99567093-99567112 | MS.gene063146:intron | 35.0% | |
| TGCTTAATAATGCTCTAACC+AGG | + | chr3.4:99570161-99570180 | MS.gene063146:CDS | 35.0% | |
| TGTAAACAAAGGTCATGAGA+TGG | + | chr3.4:99566191-99566210 | MS.gene063146:intron | 35.0% | |
| TGTTACCTTAGCATCATATG+AGG | - | chr3.4:99566441-99566460 | None:intergenic | 35.0% | |
| TTCTGTGACAACAATCTAAG+TGG | + | chr3.4:99568167-99568186 | MS.gene063146:intron | 35.0% | |
| TTTCTCTTCTATCTTAGGCA+TGG | + | chr3.4:99568404-99568423 | MS.gene063146:intron | 35.0% | |
| ! | AATTGATTCCATCACCACAT+TGG | - | chr3.4:99566568-99566587 | None:intergenic | 35.0% |
| ! | ACCATGGTCTAGATTTTTGA+GGG | + | chr3.4:99567222-99567241 | MS.gene063146:intron | 35.0% |
| ! | ACTTGTACTTGTGCTGATAA+AGG | + | chr3.4:99568910-99568929 | MS.gene063146:CDS | 35.0% |
| ! | ATTCAAGTTTCCAACCAATG+TGG | + | chr3.4:99566551-99566570 | MS.gene063146:intron | 35.0% |
| ! | CACAATAAAAGCTTTATCCG+GGG | + | chr3.4:99569111-99569130 | MS.gene063146:CDS | 35.0% |
| ! | TACCATGGTCTAGATTTTTG+AGG | + | chr3.4:99567221-99567240 | MS.gene063146:intron | 35.0% |
| ! | TGACCAAAGCACAACTATTT+TGG | + | chr3.4:99567712-99567731 | MS.gene063146:CDS | 35.0% |
| ! | TGGAATTATGGCACTTGTTA+TGG | + | chr3.4:99569919-99569938 | MS.gene063146:CDS | 35.0% |
| !! | ACAACTATTTTGGATGTGCA+AGG | + | chr3.4:99567722-99567741 | MS.gene063146:CDS | 35.0% |
| !! | CAGCATTGATGATGAACATA+CGG | - | chr3.4:99568494-99568513 | None:intergenic | 35.0% |
| !! | GCTGTTTTCGTAAGTTATCA+TGG | + | chr3.4:99569661-99569680 | MS.gene063146:intron | 35.0% |
| !! | GGAATTATGGCACTTGTTAT+GGG | + | chr3.4:99569920-99569939 | MS.gene063146:CDS | 35.0% |
| !! | TGAATTTTTGAACTTGCTCG+AGG | - | chr3.4:99566277-99566296 | None:intergenic | 35.0% |
| !! | TTTGTCAAGTACTGGAACAA+AGG | - | chr3.4:99569455-99569474 | None:intergenic | 35.0% |
| AAGATCTCTGGATCATTCCA+TGG | - | chr3.4:99568961-99568980 | None:intergenic | 40.0% | |
| AAGGGTTGGGTCTATAAAGA+AGG | + | chr3.4:99566239-99566258 | MS.gene063146:CDS | 40.0% | |
| AAGTCAAACCTAACAGCTCA+CGG | - | chr3.4:99566516-99566535 | None:intergenic | 40.0% | |
| AATACGTGCTTTCGAAAGGT+AGG | + | chr3.4:99569515-99569534 | MS.gene063146:intron | 40.0% | |
| AATTGCAGGTGCTTTCATCA+TGG | - | chr3.4:99570038-99570057 | None:intergenic | 40.0% | |
| ACTCGACAAGTAGAACTTGA+AGG | + | chr3.4:99570631-99570650 | MS.gene063146:CDS | 40.0% | |
| AGATATGCTTAAGTGGAGGA+AGG | + | chr3.4:99567285-99567304 | MS.gene063146:CDS | 40.0% | |
| AGTGAACTTCCAGAGTTCTT+GGG | + | chr3.4:99568883-99568902 | MS.gene063146:intron | 40.0% | |
| ATCACAGAAGCAGCACTTTA+TGG | + | chr3.4:99569986-99570005 | MS.gene063146:CDS | 40.0% | |
| ATCCAGGTTCAAATCCAACA+AGG | + | chr3.4:99567909-99567928 | MS.gene063146:intron | 40.0% | |
| ATGAGGATCATCATGCTTTG+AGG | - | chr3.4:99566424-99566443 | None:intergenic | 40.0% | |
| ATTCATTCACCAAAAAGGGG+AGG | + | chr3.4:99566292-99566311 | MS.gene063146:CDS | 40.0% | |
| CAAGTTCTACTTGTCGAGTA+AGG | - | chr3.4:99570630-99570649 | None:intergenic | 40.0% | |
| CAATGAACATCAAGTGTCTC+TGG | - | chr3.4:99569199-99569218 | None:intergenic | 40.0% | |
| CAATGGTAGAGGATCCAATT+TGG | - | chr3.4:99567864-99567883 | None:intergenic | 40.0% | |
| CACATACGTACATGAGCTTT+GGG | + | chr3.4:99566951-99566970 | MS.gene063146:intron | 40.0% | |
| CAGTACTCTTGAACAAGAGT+TGG | + | chr3.4:99570186-99570205 | MS.gene063146:CDS | 40.0% | |
| CCATGGTACATTAACGTTAC+AGG | - | chr3.4:99567209-99567228 | None:intergenic | 40.0% | |
| CCTGTAACGTTAATGTACCA+TGG | + | chr3.4:99567206-99567225 | MS.gene063146:intron | 40.0% | |
| CGTATGTTCATCATCAATGC+TGG | + | chr3.4:99568492-99568511 | MS.gene063146:CDS | 40.0% | |
| CTAATTGGACTTTAGGCACT+AGG | + | chr3.4:99570598-99570617 | MS.gene063146:intron | 40.0% | |
| CTAGTGCCTAAAGTCCAATT+AGG | - | chr3.4:99570600-99570619 | None:intergenic | 40.0% | |
| CTTAAGTGGAGGAAGGAATT+TGG | + | chr3.4:99567292-99567311 | MS.gene063146:CDS | 40.0% | |
| GAAGTATGAACAAAGCTGCA+AGG | + | chr3.4:99568044-99568063 | MS.gene063146:CDS | 40.0% | |
| GAATGATCCAGAGATCTTGA+AGG | + | chr3.4:99568963-99568982 | MS.gene063146:CDS | 40.0% | |
| GACAAATACGTGCTTTCGAA+AGG | + | chr3.4:99569511-99569530 | MS.gene063146:CDS | 40.0% | |
| GAGTAACAATCTGCAGCATA+AGG | - | chr3.4:99569851-99569870 | None:intergenic | 40.0% | |
| GATGATGAACATACGGTTCA+GGG | - | chr3.4:99568487-99568506 | None:intergenic | 40.0% | |
| GCGTGACTTAATTAAGAAGC+CGG | + | chr3.4:99568761-99568780 | MS.gene063146:intron | 40.0% | |
| GCTACTTGTCATGCGAATTA+TGG | - | chr3.4:99569954-99569973 | None:intergenic | 40.0% | |
| GGCAACTCAGTGTATTATGA+TGG | + | chr3.4:99570010-99570029 | MS.gene063146:CDS | 40.0% | |
| GTTGTTGCAAGTAACATCAG+TGG | + | chr3.4:99567601-99567620 | MS.gene063146:CDS | 40.0% | |
| TACTATCCACAAGGACATCA+TGG | + | chr3.4:99567518-99567537 | MS.gene063146:CDS | 40.0% | |
| TAGATGGCTCAAAATGGTGT+TGG | + | chr3.4:99569082-99569101 | MS.gene063146:intron | 40.0% | |
| TCAACTGCTTTGTCAAGTAC+TGG | - | chr3.4:99569463-99569482 | None:intergenic | 40.0% | |
| TGACTCCCTAATTGGACTTT+AGG | + | chr3.4:99570591-99570610 | MS.gene063146:intron | 40.0% | |
| TGAGCCATCTAATTCATCCA+AGG | - | chr3.4:99569073-99569092 | None:intergenic | 40.0% | |
| TGAGGATCATCATGCTTTGA+GGG | - | chr3.4:99566423-99566442 | None:intergenic | 40.0% | |
| TGTGGACAGATATGCTTAAG+TGG | + | chr3.4:99567278-99567297 | MS.gene063146:CDS | 40.0% | |
| TTGGATCAACCCAAATCCTA+TGG | + | chr3.4:99569220-99569239 | MS.gene063146:CDS | 40.0% | |
| TTTGCTGCAATTGAACATGC+AGG | - | chr3.4:99567683-99567702 | None:intergenic | 40.0% | |
| ! | ACAAAGCAGTTGATTCTTCG+TGG | + | chr3.4:99569470-99569489 | MS.gene063146:CDS | 40.0% |
| ! | CGCTAATGAAGCACCATTAA+TGG | - | chr3.4:99568246-99568265 | None:intergenic | 40.0% |
| ! | GTTCTGGATTTAGGCTATTG+TGG | + | chr3.4:99568514-99568533 | MS.gene063146:CDS | 40.0% |
| ! | TGATGATGAACATACGGTTC+AGG | - | chr3.4:99568488-99568507 | None:intergenic | 40.0% |
| ! | TGCTCTGGTATTTGTTACCT+AGG | - | chr3.4:99568684-99568703 | None:intergenic | 40.0% |
| ! | TGTACTTGTGCTGATAAAGG+TGG | + | chr3.4:99568913-99568932 | MS.gene063146:CDS | 40.0% |
| !! | ACTCACCAATTTTGACAGGT+CGG | - | chr3.4:99565790-99565809 | None:intergenic | 40.0% |
| !! | AGGACATCATGGAGTTGATA+AGG | + | chr3.4:99567529-99567548 | MS.gene063146:CDS | 40.0% |
| !! | ATTTGGTGCTGACACTATCA+TGG | + | chr3.4:99567309-99567328 | MS.gene063146:CDS | 40.0% |
| !! | CATCATGGAGTTGATAAGGA+TGG | + | chr3.4:99567533-99567552 | MS.gene063146:CDS | 40.0% |
| !! | GACTACTCACCAATTTTGAC+AGG | - | chr3.4:99565794-99565813 | None:intergenic | 40.0% |
| !! | GCTTACATGGATTTTTGAGG+TGG | - | chr3.4:99568571-99568590 | None:intergenic | 40.0% |
| !! | TATTTTGGATGTGCAAGGAG+TGG | + | chr3.4:99567727-99567746 | MS.gene063146:CDS | 40.0% |
| !! | TCAATGCTGGTTCTGGATTT+AGG | + | chr3.4:99568505-99568524 | MS.gene063146:CDS | 40.0% |
| !! | TTCATCATCAATGCTGGTTC+TGG | + | chr3.4:99568498-99568517 | MS.gene063146:CDS | 40.0% |
| !!! | AGCATTTCCTCTTTTTCAGG+AGG | - | chr3.4:99570145-99570164 | None:intergenic | 40.0% |
| !!! | ATGGATTTTTGAGGTGGTCT+TGG | - | chr3.4:99568565-99568584 | None:intergenic | 40.0% |
| !!! | TGGATTTTTGAGGTGGTCTT+GGG | - | chr3.4:99568564-99568583 | None:intergenic | 40.0% |
| ACAGAAGCAGCACTTTATGG+TGG | + | chr3.4:99569989-99570008 | MS.gene063146:CDS | 45.0% | |
| ACCATGTACGAGAGTTTGAG+AGG | + | chr3.4:99567639-99567658 | MS.gene063146:CDS | 45.0% | |
| AGAGTTGGGTGCAACCAAAA+AGG | + | chr3.4:99570201-99570220 | MS.gene063146:CDS | 45.0% | |
| ATTGCAGTATGATGCTGCAG+CGG | + | chr3.4:99567880-99567899 | MS.gene063146:intron | 45.0% | |
| CAGAGGCTTCAGAAGATTGA+TGG | + | chr3.4:99568076-99568095 | MS.gene063146:CDS | 45.0% | |
| CAGTGAACTTCCAGAGTTCT+TGG | + | chr3.4:99568882-99568901 | MS.gene063146:intron | 45.0% | |
| CCAAAGCTCATGTACGTATG+TGG | - | chr3.4:99566953-99566972 | None:intergenic | 45.0% | |
| CCACATACGTACATGAGCTT+TGG | + | chr3.4:99566950-99566969 | MS.gene063146:intron | 45.0% | |
| CCATGTACGAGAGTTTGAGA+GGG | + | chr3.4:99567640-99567659 | MS.gene063146:CDS | 45.0% | |
| CTTGACCGACCTGTCAAAAT+TGG | + | chr3.4:99565782-99565801 | MS.gene063146:CDS | 45.0% | |
| GATTCCATCACCACATTGGT+TGG | - | chr3.4:99566564-99566583 | None:intergenic | 45.0% | |
| GCATCATACTGCAATGGTAG+AGG | - | chr3.4:99567875-99567894 | None:intergenic | 45.0% | |
| GCCCTCAAAAATCTAGACCA+TGG | - | chr3.4:99567226-99567245 | None:intergenic | 45.0% | |
| GGACAGATATGCTTAAGTGG+AGG | + | chr3.4:99567281-99567300 | MS.gene063146:CDS | 45.0% | |
| GGATGCATGCTATCTGACAA+GGG | + | chr3.4:99568934-99568953 | MS.gene063146:CDS | 45.0% | |
| GGTTGGGTCTATAAAGAAGG+TGG | + | chr3.4:99566242-99566261 | MS.gene063146:CDS | 45.0% | |
| GTTTCCAACCAATGTGGTGA+TGG | + | chr3.4:99566557-99566576 | MS.gene063146:intron | 45.0% | |
| TCAACTCCATGATGTCCTTG+TGG | - | chr3.4:99567527-99567546 | None:intergenic | 45.0% | |
| TCATGAGATGGAACATTCCG+AGG | + | chr3.4:99566203-99566222 | MS.gene063146:CDS | 45.0% | |
| TGATTCATTGACCAGGTCCT+AGG | + | chr3.4:99568664-99568683 | MS.gene063146:intron | 45.0% | |
| TGATTTGACCGTGAGCTGTT+AGG | + | chr3.4:99566505-99566524 | MS.gene063146:intron | 45.0% | |
| TGCTTGAAGTCATTGATGCC+AGG | + | chr3.4:99568707-99568726 | MS.gene063146:CDS | 45.0% | |
| TGGATGCATGCTATCTGACA+AGG | + | chr3.4:99568933-99568952 | MS.gene063146:CDS | 45.0% | |
| TGTCATGCCTCCTGAAAAAG+AGG | + | chr3.4:99570135-99570154 | MS.gene063146:CDS | 45.0% | |
| TTTCGATGCAGAAGAGTTGC+AGG | + | chr3.4:99566353-99566372 | MS.gene063146:CDS | 45.0% | |
| ! | AAAAGCTTTATCCGGGGTTG+AGG | + | chr3.4:99569117-99569136 | MS.gene063146:CDS | 45.0% |
| ! | CAAGAACTCTGGAAGTTCAC+TGG | - | chr3.4:99568884-99568903 | None:intergenic | 45.0% |
| ! | GATTGTTTTCTCCTCAACCC+CGG | - | chr3.4:99569131-99569150 | None:intergenic | 45.0% |
| ! | GCTGCTTCTGTGATTTTCCT+TGG | - | chr3.4:99569980-99569999 | None:intergenic | 45.0% |
| ! | GGTATTTGTTACCTAGGACC+TGG | - | chr3.4:99568678-99568697 | None:intergenic | 45.0% |
| ! | TGACTTCAAGCAACTTGCTC+TGG | - | chr3.4:99568699-99568718 | None:intergenic | 45.0% |
| ! | TGATGGTGACAACTATCCTG+AGG | + | chr3.4:99568093-99568112 | MS.gene063146:CDS | 45.0% |
| ! | TGCCTTGTTGGATTTGAACC+TGG | - | chr3.4:99567914-99567933 | None:intergenic | 45.0% |
| !! | ATTTTGACAGGTCGGTCAAG+AGG | - | chr3.4:99565782-99565801 | None:intergenic | 45.0% |
| !! | CATCAATCTTCTGAAGCCTC+TGG | - | chr3.4:99568078-99568097 | None:intergenic | 45.0% |
| !! | TTGTTCAAGAGTACTGACCC+TGG | - | chr3.4:99570182-99570201 | None:intergenic | 45.0% |
| !!! | TCTTTTTCAGGAGGCATGAC+AGG | - | chr3.4:99570136-99570155 | None:intergenic | 45.0% |
| CAAGTACCACCCAAGAACTC+TGG | - | chr3.4:99568895-99568914 | None:intergenic | 50.0% | |
| CCCTCTCAAACTCTCGTACA+TGG | - | chr3.4:99567643-99567662 | None:intergenic | 50.0% | |
| GAACTTCCAGAGTTCTTGGG+TGG | + | chr3.4:99568886-99568905 | MS.gene063146:CDS | 50.0% | |
| GCATGACAAGTAGCATGCCA+AGG | + | chr3.4:99569960-99569979 | MS.gene063146:CDS | 50.0% | |
| GCTGCAGCATCATACTGCAA+TGG | - | chr3.4:99567881-99567900 | None:intergenic | 50.0% | |
| TATGGCCATGATGAAGCGCA+TGG | + | chr3.4:99570072-99570091 | MS.gene063146:CDS | 50.0% | |
| TGCTATCTGACAAGGGTCCA+TGG | + | chr3.4:99568941-99568960 | MS.gene063146:CDS | 50.0% | |
| TTCAGCCATGCGCTTCATCA+TGG | - | chr3.4:99570080-99570099 | None:intergenic | 50.0% | |
| ! | TTGAGGTGGTCTTGGGATCT+AGG | - | chr3.4:99568557-99568576 | None:intergenic | 50.0% |
| !! | CAATCTTCTGAAGCCTCTGG+AGG | - | chr3.4:99568075-99568094 | None:intergenic | 50.0% |
| !! | TGGTGCTGACACTATCATGG+AGG | + | chr3.4:99567312-99567331 | MS.gene063146:CDS | 50.0% |
| CATACGGTTCAGGGACTGTG+TGG | - | chr3.4:99568478-99568497 | None:intergenic | 55.0% | |
| GCTTACAGTTCCGCTTCCAC+TGG | + | chr3.4:99570784-99570803 | MS.gene063146:intron | 55.0% | |
| GTATGATGCTGCAGCGGTAG+AGG | + | chr3.4:99567886-99567905 | MS.gene063146:intron | 55.0% | |
| ! | GCTGTGCTTCCTCCCCTTTT+TGG | - | chr3.4:99566304-99566323 | None:intergenic | 55.0% |
| CTGCAAGGGATCTCCTCCAG+AGG | + | chr3.4:99568059-99568078 | MS.gene063146:CDS | 60.0% | |
| GACAGGTCGGTCAAGAGGTG+CGG | - | chr3.4:99565777-99565796 | None:intergenic | 60.0% | |
| ! | ACAGGTCGGTCAAGAGGTGC+GGG | - | chr3.4:99565776-99565795 | None:intergenic | 60.0% |
| GCTGCAGCGGTAGAGGATCC+AGG | + | chr3.4:99567893-99567912 | MS.gene063146:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 99565758 | 99570809 | 99565758 | ID=MS.gene063146 |
| chr3.4 | mRNA | 99565758 | 99570809 | 99565758 | ID=MS.gene063146.t1;Parent=MS.gene063146 |
| chr3.4 | exon | 99565758 | 99565803 | 99565758 | ID=MS.gene063146.t1.exon1;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99565758 | 99565803 | 99565758 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99566202 | 99566454 | 99566202 | ID=MS.gene063146.t1.exon2;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99566202 | 99566454 | 99566202 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99567234 | 99567333 | 99567234 | ID=MS.gene063146.t1.exon3;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99567234 | 99567333 | 99567234 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99567482 | 99567748 | 99567482 | ID=MS.gene063146.t1.exon4;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99567482 | 99567748 | 99567482 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99568037 | 99568114 | 99568037 | ID=MS.gene063146.t1.exon5;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99568037 | 99568114 | 99568037 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99568483 | 99568584 | 99568483 | ID=MS.gene063146.t1.exon6;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99568483 | 99568584 | 99568483 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99568679 | 99568728 | 99568679 | ID=MS.gene063146.t1.exon7;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99568679 | 99568728 | 99568679 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99568885 | 99568984 | 99568885 | ID=MS.gene063146.t1.exon8;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99568885 | 99568984 | 99568885 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99569085 | 99569243 | 99569085 | ID=MS.gene063146.t1.exon9;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99569085 | 99569243 | 99569085 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99569436 | 99569532 | 99569436 | ID=MS.gene063146.t1.exon10;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99569436 | 99569532 | 99569436 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99569861 | 99570222 | 99569861 | ID=MS.gene063146.t1.exon11;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99569861 | 99570222 | 99569861 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99570613 | 99570687 | 99570613 | ID=MS.gene063146.t1.exon12;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99570613 | 99570687 | 99570613 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| chr3.4 | exon | 99570792 | 99570809 | 99570792 | ID=MS.gene063146.t1.exon13;Parent=MS.gene063146.t1 |
| chr3.4 | CDS | 99570792 | 99570809 | 99570792 | ID=cds.MS.gene063146.t1;Parent=MS.gene063146.t1 |
| Gene Sequence |
| Protein sequence |
