AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057637

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057637.t1 MTR_4g070720 97.345 565 15 0 1 565 1 565 0.0 1150
MS.gene057637.t1 MTR_3g117090 71.750 577 143 12 1 565 1 569 0.0 768
MS.gene057637.t1 MTR_3g117090 71.715 548 138 11 1 539 1 540 0.0 743
MS.gene057637.t1 MTR_6g015645 70.179 446 114 10 133 565 9 448 0.0 594
MS.gene057637.t1 MTR_8g076880 58.094 556 203 11 26 565 13 554 0.0 590
MS.gene057637.t1 MTR_3g117100 54.500 600 216 16 19 565 28 623 0.0 583
MS.gene057637.t1 MTR_1g022480 52.749 582 225 13 24 560 35 611 0.0 559
MS.gene057637.t1 MTR_1g022480 52.568 584 225 13 24 560 35 613 0.0 558
MS.gene057637.t1 MTR_4g070810 54.196 572 211 13 42 565 48 616 0.0 555
MS.gene057637.t1 MTR_1g022480 52.122 589 225 14 24 560 35 618 0.0 551
MS.gene057637.t1 MTR_5g021050 74.085 328 82 3 32 356 10 337 5.51e-180 516
MS.gene057637.t1 MTR_5g021050 42.169 83 47 1 480 561 388 470 1.44e-14 76.6
MS.gene057637.t1 MTR_5g021050 74.085 328 82 3 32 356 10 337 1.23e-179 515
MS.gene057637.t1 MTR_5g021050 42.169 83 47 1 480 561 388 470 1.41e-14 76.6
MS.gene057637.t1 MTR_3g112150 49.914 583 231 10 21 565 13 572 5.38e-176 509
MS.gene057637.t1 MTR_1g022480 51.992 502 196 11 99 560 31 527 1.86e-164 479
MS.gene057637.t1 MTR_7g056587 57.057 333 134 3 12 337 11 341 8.46e-135 405
MS.gene057637.t1 MTR_7g056587 57.057 333 134 3 12 337 19 349 1.11e-134 405
MS.gene057637.t1 MTR_7g056587 57.057 333 134 3 12 337 19 349 1.75e-134 404
MS.gene057637.t1 MTR_7g056587 57.057 333 134 3 12 337 33 363 2.99e-134 404
MS.gene057637.t1 MTR_4g070790 57.616 302 115 3 68 362 49 344 4.91e-125 373
MS.gene057637.t1 MTR_3g010190 43.918 485 232 13 16 465 16 495 3.24e-124 375
MS.gene057637.t1 MTR_8g071000 39.206 579 291 15 38 563 33 603 1.04e-118 364
MS.gene057637.t1 MTR_5g012460 43.990 416 215 6 15 416 28 439 3.45e-112 342
MS.gene057637.t1 MTR_7g056587 64.732 224 79 0 114 337 1 224 4.97e-111 340
MS.gene057637.t1 MTR_4g070780 46.110 347 157 5 74 416 36 356 1.43e-92 290
MS.gene057637.t1 MTR_4g070730 52.985 268 87 4 73 339 41 270 8.80e-91 285
MS.gene057637.t1 MTR_6g034285 53.922 102 47 0 132 233 195 296 2.94e-29 120
MS.gene057637.t1 MTR_3g098530 31.687 243 146 8 70 311 44 267 6.00e-21 93.2
MS.gene057637.t1 MTR_3g060670 29.412 221 125 5 96 303 33 235 2.74e-20 92.8
MS.gene057637.t1 MTR_2g027140 28.270 237 136 6 83 303 23 241 4.81e-20 92.0
MS.gene057637.t1 MTR_8g096180 32.143 224 133 7 89 306 42 252 1.31e-19 89.4
MS.gene057637.t1 MTR_8g096180 31.963 219 130 7 89 306 42 242 2.16e-19 88.6
MS.gene057637.t1 MTR_8g096170 32.877 219 128 7 89 306 45 245 3.50e-19 87.8
MS.gene057637.t1 MTR_7g070480 24.747 396 220 15 27 389 30 380 1.34e-18 89.0
MS.gene057637.t1 MTR_4g013300 27.876 226 140 7 96 312 125 336 5.22e-16 80.9
MS.gene057637.t1 MTR_8g095360 26.754 228 148 6 96 316 181 396 1.28e-15 80.1
MS.gene057637.t1 MTR_2g027140 29.082 196 123 4 114 303 1 186 3.23e-15 76.6
MS.gene057637.t1 MTR_1g032580 29.577 213 131 8 97 306 32 228 1.91e-13 70.9
MS.gene057637.t1 MTR_1g022185 30.047 213 123 9 99 306 48 239 3.05e-13 70.9
MS.gene057637.t1 MTR_3g097350 27.074 229 148 7 87 306 238 456 5.22e-11 65.9
MS.gene057637.t1 MTR_2g031610 26.087 230 149 8 86 306 132 349 6.77e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057637.t1 AT2G21540 61.863 569 188 10 1 563 1 546 0.0 674
MS.gene057637.t1 AT2G21540 61.863 569 188 10 1 563 1 546 0.0 674
MS.gene057637.t1 AT2G21540 61.863 569 188 10 1 563 1 546 0.0 674
MS.gene057637.t1 AT2G21540 61.863 569 188 10 1 563 1 546 0.0 674
MS.gene057637.t1 AT2G21540 61.796 568 184 11 1 563 1 540 0.0 665
MS.gene057637.t1 AT2G21540 61.796 568 184 11 1 563 1 540 0.0 665
MS.gene057637.t1 AT4G36490 60.940 553 185 9 26 565 8 542 0.0 651
MS.gene057637.t1 AT4G39180 58.304 566 200 13 1 554 1 542 0.0 646
MS.gene057637.t1 AT4G39180 58.304 566 199 14 1 554 1 541 0.0 642
MS.gene057637.t1 AT4G39180 58.304 566 199 14 1 554 1 541 0.0 642
MS.gene057637.t1 AT2G18180 59.528 551 193 9 27 565 13 545 0.0 629
MS.gene057637.t1 AT2G18180 59.165 551 195 9 27 565 13 545 0.0 624
MS.gene057637.t1 AT4G34580 58.750 560 201 13 19 563 7 551 0.0 614
MS.gene057637.t1 AT4G34580 58.750 560 201 13 19 563 7 551 0.0 614
MS.gene057637.t1 AT4G39170 55.143 593 210 13 19 563 28 612 0.0 593
MS.gene057637.t1 AT4G39170 54.975 593 209 14 19 563 28 610 0.0 585
MS.gene057637.t1 AT2G21520 53.130 591 224 15 19 558 32 620 0.0 572
MS.gene057637.t1 AT2G21520 53.130 591 224 15 19 558 32 620 0.0 572
MS.gene057637.t1 AT2G21520 53.130 591 224 15 19 558 28 616 0.0 572
MS.gene057637.t1 AT2G18180 59.959 482 162 8 97 565 11 474 0.0 563
MS.gene057637.t1 AT2G16380 52.737 548 229 10 27 563 16 544 0.0 558
MS.gene057637.t1 AT2G16380 52.737 548 229 10 27 563 16 544 0.0 558
MS.gene057637.t1 AT2G18180 59.544 482 164 8 97 565 11 474 0.0 556
MS.gene057637.t1 AT2G18180 59.740 462 161 7 114 565 1 447 0.0 536
MS.gene057637.t1 AT1G19650 48.229 593 252 13 19 565 25 608 6.72e-175 508
MS.gene057637.t1 AT2G16380 52.183 458 192 8 114 563 1 439 1.33e-159 463
MS.gene057637.t1 AT1G19650 68.405 326 99 3 19 341 25 349 5.30e-159 461
MS.gene057637.t1 AT1G19650 48.256 516 216 10 93 565 29 536 3.07e-155 455
MS.gene057637.t1 AT3G24840 46.126 555 247 12 20 549 22 549 1.76e-154 455
MS.gene057637.t1 AT3G24840 46.126 555 247 12 20 549 22 549 1.76e-154 455
MS.gene057637.t1 AT3G24840 46.126 555 247 12 20 549 22 549 1.76e-154 455
MS.gene057637.t1 AT3G24840 46.126 555 247 12 20 549 22 549 1.76e-154 455
MS.gene057637.t1 AT3G24840 46.043 556 247 12 20 549 22 550 3.45e-154 454
MS.gene057637.t1 AT3G24840 46.043 556 247 12 20 549 22 550 3.45e-154 454
MS.gene057637.t1 AT3G24840 46.043 556 247 12 20 549 22 550 3.45e-154 454
MS.gene057637.t1 AT1G75370 67.964 334 99 2 19 344 28 361 5.28e-150 444
MS.gene057637.t1 AT1G75370 67.964 334 99 2 19 344 28 361 3.80e-149 444
MS.gene057637.t1 AT5G56160 38.544 563 319 10 21 561 15 572 7.74e-127 384
MS.gene057637.t1 AT5G56160 38.544 563 319 10 21 561 15 572 7.74e-127 384
MS.gene057637.t1 AT5G56160 54.180 323 143 4 21 338 15 337 1.39e-124 375
MS.gene057637.t1 AT1G55690 56.156 333 139 6 19 344 19 351 4.95e-122 373
MS.gene057637.t1 AT1G55690 56.156 333 139 6 19 344 19 351 8.35e-122 372
MS.gene057637.t1 AT1G55690 56.156 333 139 6 19 344 19 351 8.35e-122 372
MS.gene057637.t1 AT1G55690 56.156 333 139 6 19 344 19 351 8.35e-122 372
MS.gene057637.t1 AT1G55690 56.156 333 139 6 19 344 19 351 8.35e-122 372
MS.gene057637.t1 AT5G47510 51.331 263 128 0 72 334 27 289 4.31e-104 317
MS.gene057637.t1 AT5G47510 51.331 263 128 0 72 334 27 289 8.24e-104 318
MS.gene057637.t1 AT5G47510 51.331 263 128 0 72 334 26 288 9.59e-104 318
MS.gene057637.t1 AT5G47510 53.540 226 105 0 104 329 2 227 1.16e-92 287
MS.gene057637.t1 AT5G47730 28.631 241 157 5 72 303 7 241 9.39e-22 97.1
MS.gene057637.t1 AT5G47730 28.631 241 157 5 72 303 7 241 9.39e-22 97.1
MS.gene057637.t1 AT1G55840 28.230 209 142 3 97 303 12 214 3.72e-19 88.6
MS.gene057637.t1 AT1G55840 28.230 209 142 3 97 303 39 241 4.29e-19 89.0
MS.gene057637.t1 AT1G01630 29.644 253 151 9 57 306 17 245 3.84e-18 84.7
MS.gene057637.t1 AT5G47730 28.646 192 129 3 114 303 1 186 3.37e-17 82.8
MS.gene057637.t1 AT5G47730 28.646 192 129 3 114 303 1 186 3.37e-17 82.8
MS.gene057637.t1 AT1G72160 25.098 255 164 8 72 310 136 379 1.56e-16 82.8
MS.gene057637.t1 AT3G51670 26.271 236 146 8 96 323 84 299 3.56e-13 72.0
MS.gene057637.t1 AT4G09160 25.221 226 146 7 96 310 316 529 9.50e-13 71.6
MS.gene057637.t1 AT4G09160 25.221 226 146 7 96 310 316 529 1.03e-12 71.2
MS.gene057637.t1 AT4G09160 25.221 226 146 7 96 310 341 554 1.05e-12 71.2
MS.gene057637.t1 AT1G14820 26.923 234 152 7 93 323 27 244 7.91e-12 66.2
MS.gene057637.t1 AT1G14820 27.004 237 154 7 90 323 11 231 9.61e-12 65.9
MS.gene057637.t1 AT1G14820 27.004 237 154 7 90 323 11 231 9.61e-12 65.9

Find 127 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTATTGCTGCCTTCTTTA+AGG 0.090734 4.2:-36483869 None:intergenic
GAAACTACCTTCAAGATTTC+TGG 0.128425 4.2:-36485434 None:intergenic
CAGAATTATGGCCATGGTTT+TGG 0.149183 4.2:+36486152 MS.gene057637:CDS
ACTATTGATCAACCTGTTAA+AGG 0.167552 4.2:+36483455 MS.gene057637:CDS
TCAATGCTGGTTCGGGATTT+AGG 0.174214 4.2:+36484950 MS.gene057637:CDS
TTGAGCAATTCCTCCATTTC+AGG 0.178864 4.2:-36486378 None:intergenic
AGGTCTTGAGATTGAATATT+TGG 0.201747 4.2:+36483819 MS.gene057637:intron
CTCCAATGGAGGAGGGAATT+TGG 0.273143 4.2:+36484229 MS.gene057637:CDS
CAGTGAACTTCCAGAGTTCT+TGG 0.309109 4.2:+36485346 MS.gene057637:intron
TTGAGGGTAATAGTTCTTCT+AGG 0.323926 4.2:-36484017 None:intergenic
ACAGGTTGATCAATAGTAAT+AGG 0.325672 4.2:-36483449 None:intergenic
TTCATCATCAATGCTGGTTC+GGG 0.333695 4.2:+36484943 MS.gene057637:CDS
ACCTTCCATGCCACCTGAAA+TGG 0.343417 4.2:+36486365 MS.gene057637:CDS
TAGATTTACTAACCTTTAAC+AGG 0.345398 4.2:-36483467 None:intergenic
GTGCCTTCGCCCCTTCTTGA+AGG 0.373381 4.2:-36483914 None:intergenic
GGTATATATTGATGGCAATA+TGG 0.374670 4.2:+36486248 MS.gene057637:CDS
TGAATGACAAACAAGTATCT+TGG 0.383285 4.2:+36485901 MS.gene057637:CDS
AGAAGGGGCGAAGGCACAAC+AGG 0.395434 4.2:+36483920 MS.gene057637:CDS
GGTAACAATGTATGCAAGAA+TGG 0.412286 4.2:+36486108 MS.gene057637:CDS
CCCAACCTTTCTATGTAAAC+AGG 0.413197 4.2:-36484462 None:intergenic
AGTGAACTTCCAGAGTTCTT+GGG 0.420010 4.2:+36485347 MS.gene057637:intron
TGATCAAAGCACAACTATCT+TGG 0.420976 4.2:+36484614 MS.gene057637:CDS
GTTCATCATCAATGCTGGTT+CGG 0.428392 4.2:+36484942 MS.gene057637:CDS
CAACTCCATGTGTTCCTTGA+GGG 0.429365 4.2:-36484425 None:intergenic
ACTGATGCAAGTAACGACTA+TGG 0.432973 4.2:+36484503 MS.gene057637:CDS
AATCGATACAGAAGAGTTGC+AGG 0.433152 4.2:+36483966 MS.gene057637:CDS
GTTCAAACATTCCTTCAAGA+AGG 0.436645 4.2:+36483903 MS.gene057637:CDS
TTACATAGAAAGGTTGGGTT+TGG 0.438060 4.2:+36484467 MS.gene057637:CDS
ATCAGTACAAAATGATCAAA+AGG 0.448986 4.2:+36485929 MS.gene057637:CDS
TCGAGGTGGTCTTGGGATCA+AGG 0.450087 4.2:-36484999 None:intergenic
GGTAACTCGGTATATATTGA+TGG 0.451076 4.2:+36486240 MS.gene057637:CDS
TCCATTTCAGGTGGCATGGA+AGG 0.453045 4.2:-36486366 None:intergenic
TGATTTCAAGCAACTTGCTC+TGG 0.456669 4.2:-36485158 None:intergenic
CGTTGATGTGCAGATTGCTT+TGG 0.457244 4.2:+36486087 MS.gene057637:intron
GAAGACCTGTTTACATAGAA+AGG 0.458189 4.2:+36484457 MS.gene057637:CDS
GAATGACAAACAAGTATCTT+GGG 0.458886 4.2:+36485902 MS.gene057637:CDS
ACCTGTTTACATAGAAAGGT+TGG 0.459238 4.2:+36484461 MS.gene057637:CDS
CCTGTTTACATAGAAAGGTT+GGG 0.459264 4.2:+36484462 MS.gene057637:CDS
CAAGGGCTTCAGAAGATTGA+TGG 0.460929 4.2:+36484807 MS.gene057637:CDS
GATGATGAACATACGGTTCA+AGG 0.463960 4.2:-36484929 None:intergenic
GTACATGGTACTTAAGATAT+CGG 0.465167 4.2:-36484527 None:intergenic
CACCAAATTCCCTCCTCCAT+TGG 0.472756 4.2:-36484231 None:intergenic
CATCAATCTTCTGAAGCCCT+TGG 0.481135 4.2:-36484806 None:intergenic
TTCAAACATTCCTTCAAGAA+GGG 0.481510 4.2:+36483904 MS.gene057637:CDS
TAATTGATTGATCAGGTCCT+AGG 0.483244 4.2:+36485126 MS.gene057637:intron
AGGAACACATGGAGTTGATA+AGG 0.483607 4.2:+36484431 MS.gene057637:CDS
TTTGCTGCAATTGAACAAGC+AGG 0.492349 4.2:-36484582 None:intergenic
ATGACTGCAATTGCATTGTA+TGG 0.496484 4.2:+36486219 MS.gene057637:CDS
AACCATGGCCATAATTCTGC+CGG 0.506924 4.2:-36486148 None:intergenic
TTCCGGCAGAATTATGGCCA+TGG 0.507474 4.2:+36486146 MS.gene057637:CDS
AAGATTTCTGGATCATTCCA+TGG 0.509508 4.2:-36485422 None:intergenic
TGCTCTGGTATTTGTTACCT+AGG 0.510194 4.2:-36485143 None:intergenic
TGCTTGAAATCATCGATGCC+AGG 0.510523 4.2:+36485169 MS.gene057637:CDS
TTCCTCCATTTCAGGTGGCA+TGG 0.511464 4.2:-36486370 None:intergenic
GTTTGTGATTGCAGTTCCAC+TGG 0.517448 4.2:+36486707 MS.gene057637:intron
GAAAACTTTATCCGAAGTTG+AGG 0.528688 4.2:+36485573 MS.gene057637:CDS
GATGAAAAGAGAACAAGGCT+TGG 0.532278 4.2:+36483844 MS.gene057637:CDS
ATTCACCTTCTCTTCTAGAT+CGG 0.535193 4.2:-36486328 None:intergenic
TCTTGAGATTGAATATTTGG+AGG 0.535896 4.2:+36483822 MS.gene057637:CDS
AGAGTTGGCTACAGCCAAGA+AGG 0.536487 4.2:+36486434 MS.gene057637:CDS
TGCATATCAGTTCGACACCT+TGG 0.542514 4.2:+36485872 MS.gene057637:CDS
CAGATATGCTCCAATGGAGG+AGG 0.542666 4.2:+36484221 MS.gene057637:CDS
ATCATGTGTGACACTATGTC+TGG 0.544111 4.2:+36483425 None:intergenic
ATGATCATCATATGATGCTA+AGG 0.545044 4.2:+36484046 MS.gene057637:CDS
ATGAATTAGATGGTTCAAAA+CGG 0.546710 4.2:+36485532 MS.gene057637:intron
CGTATGTTCATCATCAATGC+TGG 0.547791 4.2:+36484937 MS.gene057637:CDS
GTGAACTTCCAGAGTTCTTG+GGG 0.551248 4.2:+36485348 MS.gene057637:intron
ACAAGCAGGCATCTTAACAT+TGG 0.553424 4.2:-36484568 None:intergenic
TGGTTGCATGCTTTCTGACA+AGG 0.554475 4.2:+36485397 MS.gene057637:CDS
TTTGTCATTCATTGAGACCA+AGG 0.554617 4.2:-36485889 None:intergenic
TCTAAACCGTGTCGATACAC+TGG 0.555753 4.2:+36486407 MS.gene057637:CDS
ATTTGGTGCCGATACTATCA+TGG 0.556047 4.2:+36484246 MS.gene057637:CDS
GAATGATCCAGAAATCTTGA+AGG 0.557107 4.2:+36485427 MS.gene057637:CDS
CATTTCCGTTGATGATCACA+TGG 0.558838 4.2:+36486287 MS.gene057637:CDS
TCTTCTCAAACTCTCGTACA+TGG 0.560760 4.2:-36484542 None:intergenic
CGATACACTGGAGCAAGAGT+TGG 0.564279 4.2:+36486419 MS.gene057637:CDS
TCAACTCCATGTGTTCCTTG+AGG 0.566578 4.2:-36484426 None:intergenic
TGCTTTCTGACAAGGGACCA+TGG 0.567626 4.2:+36485405 MS.gene057637:CDS
TACTACCCTCAAGGAACACA+TGG 0.568354 4.2:+36484420 MS.gene057637:CDS
AATGTAGATTCTTGAGAGCA+AGG 0.568501 4.2:+36484164 MS.gene057637:intron
TTCCATGCCACCTGAAATGG+AGG 0.574584 4.2:+36486368 MS.gene057637:CDS
CAGCATTGATGATGAACATA+CGG 0.574837 4.2:-36484936 None:intergenic
TGATCATCAACGGAAATGAC+AGG 0.575643 4.2:-36486282 None:intergenic
TCAAACATTCCTTCAAGAAG+GGG 0.577257 4.2:+36483905 MS.gene057637:CDS
GTTCTAAAATACTACCCTCA+AGG 0.581819 4.2:+36484411 MS.gene057637:CDS
GAAGCTCCACTTGCCTAGCA+AGG 0.584248 4.2:-36486554 None:intergenic
GGTTGCATGCTTTCTGACAA+GGG 0.584666 4.2:+36485398 MS.gene057637:CDS
CATGACCGATCTAGAAGAGA+AGG 0.585875 4.2:+36486323 MS.gene057637:CDS
AGCAATTCCTCCATTTCAGG+TGG 0.586975 4.2:-36486375 None:intergenic
AAATACCTCCATGATAGTAT+CGG 0.587094 4.2:-36484254 None:intergenic
ACACATGGAGTTGATAAGGA+TGG 0.589217 4.2:+36484435 MS.gene057637:CDS
AGACGAAGGAGTGTGTCAAA+AGG 0.590474 4.2:+36485612 MS.gene057637:CDS
CACTTGATGATGCCCTTGCT+AGG 0.595315 4.2:+36486541 MS.gene057637:CDS
AATTGCATTGTATGGTAACT+CGG 0.595923 4.2:+36486227 MS.gene057637:CDS
GGTGGTCTTGGGATCAAGGA+AGG 0.597891 4.2:-36484995 None:intergenic
GCTGCAAGAGATCTCATCCA+AGG 0.597936 4.2:+36484789 MS.gene057637:CDS
AAAACAATCGTCGAAGACGA+AGG 0.598967 4.2:+36485598 MS.gene057637:CDS
AAGGCTTGGATCCTTAAAGA+AGG 0.599891 4.2:+36483858 MS.gene057637:CDS
TAGAGCCATGTGATCATCAA+CGG 0.599949 4.2:-36486292 None:intergenic
AACTTACTTCTGCTATAGCA+TGG 0.605936 4.2:-36485764 None:intergenic
AAGCTCCACTTGCCTAGCAA+GGG 0.609549 4.2:-36486553 None:intergenic
ACAACTATCTTGGATGTCCA+AGG 0.610723 4.2:+36484624 MS.gene057637:CDS
TGACGTTCATCCGCATGACA+CGG 0.612693 4.2:+36486181 MS.gene057637:CDS
CTGCAAGAGATCTCATCCAA+GGG 0.614690 4.2:+36484790 MS.gene057637:CDS
ATTCCTTCAAGAAGGGGCGA+AGG 0.615207 4.2:+36483911 MS.gene057637:CDS
TGTGGGCAGATATGCTCCAA+TGG 0.615883 4.2:+36484215 MS.gene057637:CDS
CAACAAAGAATACGTTCTCG+AGG 0.621800 4.2:+36485734 MS.gene057637:CDS
TGGAGGATGAAAAGAGAACA+AGG 0.626518 4.2:+36483839 MS.gene057637:CDS
CCTTAGTAATTAATTACCAG+TGG 0.627692 4.2:-36486723 None:intergenic
ACGGTGAAGCAAAATGCAGA+AGG 0.628053 4.2:+36485551 MS.gene057637:CDS
TTGGTATACTCCGTGTCATG+CGG 0.646880 4.2:-36486191 None:intergenic
CTTGCTCCAGTGTATCGACA+CGG 0.648033 4.2:-36486413 None:intergenic
TATCTTGGATGTCCAAGGAG+TGG 0.654369 4.2:+36484629 MS.gene057637:CDS
ACTTGTACTTGTGCAGACAA+AGG 0.654424 4.2:+36485374 MS.gene057637:CDS
CGTCATGATTCCCAAAACCA+TGG 0.657898 4.2:-36486163 None:intergenic
AGATATGCTCCAATGGAGGA+GGG 0.660017 4.2:+36484222 MS.gene057637:CDS
CAAAGAATACGTTCTCGAGG+AGG 0.660775 4.2:+36485737 MS.gene057637:CDS
TGACAAACAAGTATCTTGGG+AGG 0.664438 4.2:+36485905 MS.gene057637:CDS
TGATGCCCTTGCTAGGCAAG+TGG 0.666904 4.2:+36486548 MS.gene057637:CDS
GAACTTCCAGAGTTCTTGGG+GGG 0.675384 4.2:+36485350 MS.gene057637:CDS
GGGCAGATATGCTCCAATGG+AGG 0.678590 4.2:+36484218 MS.gene057637:CDS
CAGGGTTATATCTGTCATCG+AGG 0.687126 4.2:+36483939 MS.gene057637:CDS
TGAACTTCCAGAGTTCTTGG+GGG 0.688265 4.2:+36485349 MS.gene057637:CDS
TGTACTTGTGCAGACAAAGG+TGG 0.715199 4.2:+36485377 MS.gene057637:CDS
GAAGGGGCGAAGGCACAACA+GGG 0.715484 4.2:+36483921 MS.gene057637:CDS
TGATGGTGACAACTATCCTG+AGG 0.717578 4.2:+36484824 MS.gene057637:CDS
TGGTGCCGATACTATCATGG+AGG 0.741681 4.2:+36484249 MS.gene057637:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATGTTCAAATTTA+AGG - chr4.2:36483655-36483674 None:intergenic 10.0%
!!! ATTTATTTGTTCCTTTTTAT+TGG + chr4.2:36486511-36486530 MS.gene057637:intron 15.0%
!!! TTTTAATTTATGCAAAAAAC+AGG + chr4.2:36483799-36483818 MS.gene057637:intron 15.0%
!! AAAGAAAAAGAAGAAAAAGT+TGG + chr4.2:36486593-36486612 MS.gene057637:CDS 20.0%
!! ATATTACTAATTGATTGATC+AGG + chr4.2:36485119-36485138 MS.gene057637:intron 20.0%
!! ATATTTATAGAAACAATGCA+TGG - chr4.2:36486655-36486674 None:intergenic 20.0%
!! GAATATCATAAGAAAAAGAA+AGG - chr4.2:36485698-36485717 None:intergenic 20.0%
!! GTATTAGAATATGAAATTTC+AGG + chr4.2:36483629-36483648 MS.gene057637:intron 20.0%
!! TGACTAACATAAATTTCTTT+CGG + chr4.2:36484351-36484370 MS.gene057637:intron 20.0%
!! TGATCAATCAATTAGTAATA+TGG - chr4.2:36485120-36485139 None:intergenic 20.0%
!!! TCTTTTTCTTATGATATTCA+GGG + chr4.2:36485699-36485718 MS.gene057637:intron 20.0%
!!! TTCTTTTTCTTATGATATTC+AGG + chr4.2:36485698-36485717 MS.gene057637:intron 20.0%
! ATCAGTACAAAATGATCAAA+AGG + chr4.2:36485929-36485948 MS.gene057637:CDS 25.0%
! ATGAATTAGATGGTTCAAAA+CGG + chr4.2:36485532-36485551 MS.gene057637:intron 25.0%
! TAAAGAAGAAAATATAGACC+TGG - chr4.2:36485190-36485209 None:intergenic 25.0%
! TACAAAATAAAAAGCTTACG+TGG - chr4.2:36485029-36485048 None:intergenic 25.0%
! TAGATTTACTAACCTTTAAC+AGG - chr4.2:36483470-36483489 None:intergenic 25.0%
! TATTCGTATTATGTGACATA+TGG - chr4.2:36485283-36485302 None:intergenic 25.0%
! TCTTGAAACTATAAAGAAGT+AGG - chr4.2:36485648-36485667 None:intergenic 25.0%
! TGAAAAAACAAAGCAAATGT+GGG + chr4.2:36484198-36484217 MS.gene057637:CDS 25.0%
! TTGAAAAAACAAAGCAAATG+TGG + chr4.2:36484197-36484216 MS.gene057637:CDS 25.0%
! TTTAAGAAATTGACCATGAA+AGG - chr4.2:36483519-36483538 None:intergenic 25.0%
!! AAAAAGAAGAAAAAGTTGGT+AGG + chr4.2:36486597-36486616 MS.gene057637:intron 25.0%
!! GGATTTAGAAATCAATTTTC+CGG + chr4.2:36486129-36486148 MS.gene057637:CDS 25.0%
!! TCTTTACTGTGTTGATAAAA+TGG - chr4.2:36486034-36486053 None:intergenic 25.0%
!!! AATTTCTTTCGGTTTTGTTA+AGG + chr4.2:36484362-36484381 MS.gene057637:intron 25.0%
!!! ATTTAACTCCTTGTGTTTTT+TGG + chr4.2:36485318-36485337 MS.gene057637:intron 25.0%
!!! TTTAACTCCTTGTGTTTTTT+GGG + chr4.2:36485319-36485338 MS.gene057637:intron 25.0%
!!! TTTTTTCCTGATGAATTAGA+TGG + chr4.2:36485522-36485541 MS.gene057637:intron 25.0%
!!! TTTTTTTATGTATGAAGCTG+AGG + chr4.2:36483670-36483689 MS.gene057637:intron 25.0%
AAATACCTCCATGATAGTAT+CGG - chr4.2:36484257-36484276 None:intergenic 30.0%
AAATCTTGAAGGTAGTTTCA+CGG + chr4.2:36485438-36485457 MS.gene057637:intron 30.0%
AACTGTCTAATCAAAGCATA+AGG - chr4.2:36484111-36484130 None:intergenic 30.0%
AATTGCATTGTATGGTAACT+CGG + chr4.2:36486227-36486246 MS.gene057637:CDS 30.0%
ACTATTGATCAACCTGTTAA+AGG + chr4.2:36483455-36483474 MS.gene057637:CDS 30.0%
AGGTCTTGAGATTGAATATT+TGG + chr4.2:36483819-36483838 MS.gene057637:intron 30.0%
ATGATCATCATATGATGCTA+AGG + chr4.2:36484046-36484065 MS.gene057637:CDS 30.0%
ATTTACTGTATGAGTCTCAA+GGG - chr4.2:36484075-36484094 None:intergenic 30.0%
GAATGACAAACAAGTATCTT+GGG + chr4.2:36485902-36485921 MS.gene057637:CDS 30.0%
GTACATGGTACTTAAGATAT+CGG - chr4.2:36484530-36484549 None:intergenic 30.0%
TAAGTACTTACTGTATAGCA+TGG + chr4.2:36484737-36484756 MS.gene057637:intron 30.0%
TATTTACTGTATGAGTCTCA+AGG - chr4.2:36484076-36484095 None:intergenic 30.0%
TCTTGAGATTGAATATTTGG+AGG + chr4.2:36483822-36483841 MS.gene057637:CDS 30.0%
TGAAAAGAAAAGTGGAACTA+AGG - chr4.2:36484903-36484922 None:intergenic 30.0%
TGAATGACAAACAAGTATCT+TGG + chr4.2:36485901-36485920 MS.gene057637:CDS 30.0%
TTCAAACATTCCTTCAAGAA+GGG + chr4.2:36483904-36483923 MS.gene057637:CDS 30.0%
TTTGAACCATCTAATTCATC+AGG - chr4.2:36485531-36485550 None:intergenic 30.0%
! ATAGTTTCAAGAGCATAGTT+TGG + chr4.2:36485656-36485675 MS.gene057637:intron 30.0%
! ATGATGATCATCATGTTTTG+AGG - chr4.2:36484037-36484056 None:intergenic 30.0%
! GGTATATATTGATGGCAATA+TGG + chr4.2:36486248-36486267 MS.gene057637:CDS 30.0%
! TGTTAAGGATTTTGAATTCG+AGG + chr4.2:36484377-36484396 MS.gene057637:intron 30.0%
! TGTTCCTTTTTATTGGCATT+AGG + chr4.2:36486518-36486537 MS.gene057637:intron 30.0%
!! ACAGGTTGATCAATAGTAAT+AGG - chr4.2:36483452-36483471 None:intergenic 30.0%
!! TGATGATCATCATGTTTTGA+GGG - chr4.2:36484036-36484055 None:intergenic 30.0%
AAATTGACCATGAAAGGCAA+AGG - chr4.2:36483513-36483532 None:intergenic 35.0%
AACTTACTTCTGCTATAGCA+TGG - chr4.2:36485767-36485786 None:intergenic 35.0%
AATGTAGATTCTTGAGAGCA+AGG + chr4.2:36484164-36484183 MS.gene057637:intron 35.0%
ACCTGTTTACATAGAAAGGT+TGG + chr4.2:36484461-36484480 MS.gene057637:CDS 35.0%
ACTTATTGCTGCCTTCTTTA+AGG - chr4.2:36483872-36483891 None:intergenic 35.0%
AGTGCCTAATGCCAATAAAA+AGG - chr4.2:36486525-36486544 None:intergenic 35.0%
ATGACTGCAATTGCATTGTA+TGG + chr4.2:36486219-36486238 MS.gene057637:CDS 35.0%
ATTCACCTTCTCTTCTAGAT+CGG - chr4.2:36486331-36486350 None:intergenic 35.0%
CAAGAAAAACAGTACCTTCT+TGG - chr4.2:36486451-36486470 None:intergenic 35.0%
CCTGTTTACATAGAAAGGTT+GGG + chr4.2:36484462-36484481 MS.gene057637:CDS 35.0%
CGTATTATGTGACATATGGA+TGG - chr4.2:36485279-36485298 None:intergenic 35.0%
CTGTTAACCCAAAAAACACA+AGG - chr4.2:36485329-36485348 None:intergenic 35.0%
GAAAACTTTATCCGAAGTTG+AGG + chr4.2:36485573-36485592 MS.gene057637:CDS 35.0%
GAAACTACCTTCAAGATTTC+TGG - chr4.2:36485437-36485456 None:intergenic 35.0%
GAAGACCTGTTTACATAGAA+AGG + chr4.2:36484457-36484476 MS.gene057637:CDS 35.0%
GAATGATCCAGAAATCTTGA+AGG + chr4.2:36485427-36485446 MS.gene057637:CDS 35.0%
GGACTGTATGAAAAGAAAAG+TGG - chr4.2:36484911-36484930 None:intergenic 35.0%
GGTAACAATGTATGCAAGAA+TGG + chr4.2:36486108-36486127 MS.gene057637:CDS 35.0%
GGTAACTCGGTATATATTGA+TGG + chr4.2:36486240-36486259 MS.gene057637:CDS 35.0%
GTAGGTAAAAATAGTACCTC+AGG - chr4.2:36484843-36484862 None:intergenic 35.0%
GTTCAAACATTCCTTCAAGA+AGG + chr4.2:36483903-36483922 MS.gene057637:CDS 35.0%
TAATTGATTGATCAGGTCCT+AGG + chr4.2:36485126-36485145 MS.gene057637:intron 35.0%
TCAAACATTCCTTCAAGAAG+GGG + chr4.2:36483905-36483924 MS.gene057637:CDS 35.0%
TGATCAAAGCACAACTATCT+TGG + chr4.2:36484614-36484633 MS.gene057637:CDS 35.0%
TTACATAGAAAGGTTGGGTT+TGG + chr4.2:36484467-36484486 MS.gene057637:CDS 35.0%
TTGAGGGTAATAGTTCTTCT+AGG - chr4.2:36484020-36484039 None:intergenic 35.0%
TTTGTCATTCATTGAGACCA+AGG - chr4.2:36485892-36485911 None:intergenic 35.0%
! AAGATTTCTGGATCATTCCA+TGG - chr4.2:36485425-36485444 None:intergenic 35.0%
! AGAATTATGGCCATGGTTTT+GGG + chr4.2:36486153-36486172 MS.gene057637:CDS 35.0%
! GATTGTTTTCTCCTCAACTT+CGG - chr4.2:36485587-36485606 None:intergenic 35.0%
! TCAATTTTCCGGCAGAATTA+TGG + chr4.2:36486140-36486159 MS.gene057637:CDS 35.0%
! TTTTACCTACTCGAGCATAT+TGG + chr4.2:36484853-36484872 MS.gene057637:intron 35.0%
! TTTTGATACATACCACTCCT+TGG - chr4.2:36484644-36484663 None:intergenic 35.0%
!! CAGCATTGATGATGAACATA+CGG - chr4.2:36484939-36484958 None:intergenic 35.0%
!! GTTCTAAAATACTACCCTCA+AGG + chr4.2:36484411-36484430 MS.gene057637:CDS 35.0%
!!! GCAATTGCAGTCATTTTTGT+TGG - chr4.2:36486213-36486232 None:intergenic 35.0%
AAAACAATCGTCGAAGACGA+AGG + chr4.2:36485598-36485617 MS.gene057637:CDS 40.0%
AAGGCTTGGATCCTTAAAGA+AGG + chr4.2:36483858-36483877 MS.gene057637:CDS 40.0%
AATCGATACAGAAGAGTTGC+AGG + chr4.2:36483966-36483985 MS.gene057637:CDS 40.0%
ACAACTATCTTGGATGTCCA+AGG + chr4.2:36484624-36484643 MS.gene057637:CDS 40.0%
ACAAGCAGGCATCTTAACAT+TGG - chr4.2:36484571-36484590 None:intergenic 40.0%
ACTGATGCAAGTAACGACTA+TGG + chr4.2:36484503-36484522 MS.gene057637:CDS 40.0%
ACTGTATAGCATGGTTGATC+AGG + chr4.2:36484746-36484765 MS.gene057637:intron 40.0%
ACTTGTACTTGTGCAGACAA+AGG + chr4.2:36485374-36485393 MS.gene057637:CDS 40.0%
AGTGAACTTCCAGAGTTCTT+GGG + chr4.2:36485347-36485366 MS.gene057637:intron 40.0%
CAAAGCAATCTGCACATCAA+CGG - chr4.2:36486089-36486108 None:intergenic 40.0%
CAACAAAGAATACGTTCTCG+AGG + chr4.2:36485734-36485753 MS.gene057637:CDS 40.0%
CATTACACCTTTGCCTTTCA+TGG + chr4.2:36483503-36483522 MS.gene057637:intron 40.0%
CCCAACCTTTCTATGTAAAC+AGG - chr4.2:36484465-36484484 None:intergenic 40.0%
CCTGCAAAATTGAAAGTGAG+TGG - chr4.2:36485836-36485855 None:intergenic 40.0%
CGTATGTTCATCATCAATGC+TGG + chr4.2:36484937-36484956 MS.gene057637:CDS 40.0%
CTGTATAGCATGGTTGATCA+GGG + chr4.2:36484747-36484766 MS.gene057637:intron 40.0%
GATGAAAAGAGAACAAGGCT+TGG + chr4.2:36483844-36483863 MS.gene057637:CDS 40.0%
GATGATGAACATACGGTTCA+AGG - chr4.2:36484932-36484951 None:intergenic 40.0%
TAGAGCCATGTGATCATCAA+CGG - chr4.2:36486295-36486314 None:intergenic 40.0%
TCTTCTCAAACTCTCGTACA+TGG - chr4.2:36484545-36484564 None:intergenic 40.0%
TGACAAACAAGTATCTTGGG+AGG + chr4.2:36485905-36485924 MS.gene057637:CDS 40.0%
TGATCATCAACGGAAATGAC+AGG - chr4.2:36486285-36486304 None:intergenic 40.0%
TGGAGGATGAAAAGAGAACA+AGG + chr4.2:36483839-36483858 MS.gene057637:CDS 40.0%
TTGAACCAATATGCTCGAGT+AGG - chr4.2:36484861-36484880 None:intergenic 40.0%
TTGAGCAATTCCTCCATTTC+AGG - chr4.2:36486381-36486400 None:intergenic 40.0%
TTTGCTGCAATTGAACAAGC+AGG - chr4.2:36484585-36484604 None:intergenic 40.0%
! AAAGCTTACGTGGATTTTCG+AGG - chr4.2:36485019-36485038 None:intergenic 40.0%
! CAGAATTATGGCCATGGTTT+TGG + chr4.2:36486152-36486171 MS.gene057637:CDS 40.0%
! CCACTCACTTTCAATTTTGC+AGG + chr4.2:36485833-36485852 MS.gene057637:intron 40.0%
! GTTCATCATCAATGCTGGTT+CGG + chr4.2:36484942-36484961 MS.gene057637:CDS 40.0%
! TGATTTCAAGCAACTTGCTC+TGG - chr4.2:36485161-36485180 None:intergenic 40.0%
! TGCTCTGGTATTTGTTACCT+AGG - chr4.2:36485146-36485165 None:intergenic 40.0%
!! ACACATGGAGTTGATAAGGA+TGG + chr4.2:36484435-36484454 MS.gene057637:CDS 40.0%
!! AGGAACACATGGAGTTGATA+AGG + chr4.2:36484431-36484450 MS.gene057637:CDS 40.0%
!! ATTTGGTGCCGATACTATCA+TGG + chr4.2:36484246-36484265 MS.gene057637:CDS 40.0%
!! CATTTCCGTTGATGATCACA+TGG + chr4.2:36486287-36486306 MS.gene057637:CDS 40.0%
!! GTTCGGGATTTAGGATTTTG+TGG + chr4.2:36484959-36484978 MS.gene057637:CDS 40.0%
!! TTCATCATCAATGCTGGTTC+GGG + chr4.2:36484943-36484962 MS.gene057637:CDS 40.0%
AACCATGGCCATAATTCTGC+CGG - chr4.2:36486151-36486170 None:intergenic 45.0%
ACGGTGAAGCAAAATGCAGA+AGG + chr4.2:36485551-36485570 MS.gene057637:CDS 45.0%
AGATATGCTCCAATGGAGGA+GGG + chr4.2:36484222-36484241 MS.gene057637:CDS 45.0%
AGCAATTCCTCCATTTCAGG+TGG - chr4.2:36486378-36486397 None:intergenic 45.0%
CAAAGAATACGTTCTCGAGG+AGG + chr4.2:36485737-36485756 MS.gene057637:CDS 45.0%
CAACTCCATGTGTTCCTTGA+GGG - chr4.2:36484428-36484447 None:intergenic 45.0%
CAAGGGCTTCAGAAGATTGA+TGG + chr4.2:36484807-36484826 MS.gene057637:CDS 45.0%
CAGGGTTATATCTGTCATCG+AGG + chr4.2:36483939-36483958 MS.gene057637:CDS 45.0%
CAGTGAACTTCCAGAGTTCT+TGG + chr4.2:36485346-36485365 MS.gene057637:intron 45.0%
CATGACCGATCTAGAAGAGA+AGG + chr4.2:36486323-36486342 MS.gene057637:CDS 45.0%
CGTCATGATTCCCAAAACCA+TGG - chr4.2:36486166-36486185 None:intergenic 45.0%
CGTTGATGTGCAGATTGCTT+TGG + chr4.2:36486087-36486106 MS.gene057637:intron 45.0%
CTGCAAGAGATCTCATCCAA+GGG + chr4.2:36484790-36484809 MS.gene057637:CDS 45.0%
GGTTGCATGCTTTCTGACAA+GGG + chr4.2:36485398-36485417 MS.gene057637:CDS 45.0%
GTGAACTTCCAGAGTTCTTG+GGG + chr4.2:36485348-36485367 MS.gene057637:intron 45.0%
GTTTGTGATTGCAGTTCCAC+TGG + chr4.2:36486707-36486726 MS.gene057637:intron 45.0%
TACTACCCTCAAGGAACACA+TGG + chr4.2:36484420-36484439 MS.gene057637:CDS 45.0%
TATCTTGGATGTCCAAGGAG+TGG + chr4.2:36484629-36484648 MS.gene057637:CDS 45.0%
TCAACTCCATGTGTTCCTTG+AGG - chr4.2:36484429-36484448 None:intergenic 45.0%
TGAACTTCCAGAGTTCTTGG+GGG + chr4.2:36485349-36485368 MS.gene057637:CDS 45.0%
TGCATATCAGTTCGACACCT+TGG + chr4.2:36485872-36485891 MS.gene057637:CDS 45.0%
TGCTTGAAATCATCGATGCC+AGG + chr4.2:36485169-36485188 MS.gene057637:CDS 45.0%
TGGTTGCATGCTTTCTGACA+AGG + chr4.2:36485397-36485416 MS.gene057637:CDS 45.0%
TGTACTTGTGCAGACAAAGG+TGG + chr4.2:36485377-36485396 MS.gene057637:CDS 45.0%
TTGGTATACTCCGTGTCATG+CGG - chr4.2:36486194-36486213 None:intergenic 45.0%
! AGACGAAGGAGTGTGTCAAA+AGG + chr4.2:36485612-36485631 MS.gene057637:CDS 45.0%
! TCTAAACCGTGTCGATACAC+TGG + chr4.2:36486407-36486426 MS.gene057637:CDS 45.0%
! TGATGGTGACAACTATCCTG+AGG + chr4.2:36484824-36484843 MS.gene057637:CDS 45.0%
!! CATCAATCTTCTGAAGCCCT+TGG - chr4.2:36484809-36484828 None:intergenic 45.0%
!! TCAATGCTGGTTCGGGATTT+AGG + chr4.2:36484950-36484969 MS.gene057637:CDS 45.0%
!! TGGATTTTCGAGGTGGTCTT+GGG - chr4.2:36485009-36485028 None:intergenic 45.0%
AAGCTCCACTTGCCTAGCAA+GGG - chr4.2:36486556-36486575 None:intergenic 50.0%
ACCTTCCATGCCACCTGAAA+TGG + chr4.2:36486365-36486384 MS.gene057637:CDS 50.0%
AGAGTTGGCTACAGCCAAGA+AGG + chr4.2:36486434-36486453 MS.gene057637:CDS 50.0%
ATTCCTTCAAGAAGGGGCGA+AGG + chr4.2:36483911-36483930 MS.gene057637:CDS 50.0%
CACCAAATTCCCTCCTCCAT+TGG - chr4.2:36484234-36484253 None:intergenic 50.0%
CAGATATGCTCCAATGGAGG+AGG + chr4.2:36484221-36484240 MS.gene057637:CDS 50.0%
CGATACACTGGAGCAAGAGT+TGG + chr4.2:36486419-36486438 MS.gene057637:CDS 50.0%
CTCCAATGGAGGAGGGAATT+TGG + chr4.2:36484229-36484248 MS.gene057637:CDS 50.0%
GAACTTCCAGAGTTCTTGGG+GGG + chr4.2:36485350-36485369 MS.gene057637:CDS 50.0%
GCTGCAAGAGATCTCATCCA+AGG + chr4.2:36484789-36484808 MS.gene057637:CDS 50.0%
TGACGTTCATCCGCATGACA+CGG + chr4.2:36486181-36486200 MS.gene057637:CDS 50.0%
TGCTTTCTGACAAGGGACCA+TGG + chr4.2:36485405-36485424 MS.gene057637:CDS 50.0%
TGTGGGCAGATATGCTCCAA+TGG + chr4.2:36484215-36484234 MS.gene057637:CDS 50.0%
TTCCATGCCACCTGAAATGG+AGG + chr4.2:36486368-36486387 MS.gene057637:CDS 50.0%
TTCCGGCAGAATTATGGCCA+TGG + chr4.2:36486146-36486165 MS.gene057637:CDS 50.0%
! CTTGCTCCAGTGTATCGACA+CGG - chr4.2:36486416-36486435 None:intergenic 50.0%
! TCCATTTCAGGTGGCATGGA+AGG - chr4.2:36486369-36486388 None:intergenic 50.0%
! TTCCTCCATTTCAGGTGGCA+TGG - chr4.2:36486373-36486392 None:intergenic 50.0%
!! CACTTGATGATGCCCTTGCT+AGG + chr4.2:36486541-36486560 MS.gene057637:CDS 50.0%
!! GCTTACGTGGATTTTCGAGG+TGG - chr4.2:36485016-36485035 None:intergenic 50.0%
!! GTGGATTTTCGAGGTGGTCT+TGG - chr4.2:36485010-36485029 None:intergenic 50.0%
!! TGGTGCCGATACTATCATGG+AGG + chr4.2:36484249-36484268 MS.gene057637:CDS 50.0%
CAAGTACCCCCCAAGAACTC+TGG - chr4.2:36485359-36485378 None:intergenic 55.0%
GAAGCTCCACTTGCCTAGCA+AGG - chr4.2:36486557-36486576 None:intergenic 55.0%
GGGCAGATATGCTCCAATGG+AGG + chr4.2:36484218-36484237 MS.gene057637:CDS 55.0%
TGATGCCCTTGCTAGGCAAG+TGG + chr4.2:36486548-36486567 MS.gene057637:CDS 55.0%
! GGTGGTCTTGGGATCAAGGA+AGG - chr4.2:36484998-36485017 None:intergenic 55.0%
! TCGAGGTGGTCTTGGGATCA+AGG - chr4.2:36485002-36485021 None:intergenic 55.0%
GTGCCTTCGCCCCTTCTTGA+AGG - chr4.2:36483917-36483936 None:intergenic 60.0%
! AGAAGGGGCGAAGGCACAAC+AGG + chr4.2:36483920-36483939 MS.gene057637:CDS 60.0%
! GAAGGGGCGAAGGCACAACA+GGG + chr4.2:36483921-36483940 MS.gene057637:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 36483428 36486732 36483428 ID=MS.gene057637
chr4.2 mRNA 36483428 36486732 36483428 ID=MS.gene057637.t1;Parent=MS.gene057637
chr4.2 exon 36483428 36483476 36483428 ID=MS.gene057637.t1.exon1;Parent=MS.gene057637.t1
chr4.2 CDS 36483428 36483476 36483428 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36483821 36484067 36483821 ID=MS.gene057637.t1.exon2;Parent=MS.gene057637.t1
chr4.2 CDS 36483821 36484067 36483821 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36484171 36484270 36484171 ID=MS.gene057637.t1.exon3;Parent=MS.gene057637.t1
chr4.2 CDS 36484171 36484270 36484171 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36484384 36484650 36484384 ID=MS.gene057637.t1.exon4;Parent=MS.gene057637.t1
chr4.2 CDS 36484384 36484650 36484384 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36484768 36484845 36484768 ID=MS.gene057637.t1.exon5;Parent=MS.gene057637.t1
chr4.2 CDS 36484768 36484845 36484768 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36484928 36485029 36484928 ID=MS.gene057637.t1.exon6;Parent=MS.gene057637.t1
chr4.2 CDS 36484928 36485029 36484928 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36485141 36485190 36485141 ID=MS.gene057637.t1.exon7;Parent=MS.gene057637.t1
chr4.2 CDS 36485141 36485190 36485141 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36485349 36485448 36485349 ID=MS.gene057637.t1.exon8;Parent=MS.gene057637.t1
chr4.2 CDS 36485349 36485448 36485349 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36485541 36485633 36485541 ID=MS.gene057637.t1.exon9;Parent=MS.gene057637.t1
chr4.2 CDS 36485541 36485633 36485541 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36485720 36485779 36485720 ID=MS.gene057637.t1.exon10;Parent=MS.gene057637.t1
chr4.2 CDS 36485720 36485779 36485720 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36485855 36485963 36485855 ID=MS.gene057637.t1.exon11;Parent=MS.gene057637.t1
chr4.2 CDS 36485855 36485963 36485855 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36486100 36486455 36486100 ID=MS.gene057637.t1.exon12;Parent=MS.gene057637.t1
chr4.2 CDS 36486100 36486455 36486100 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36486540 36486614 36486540 ID=MS.gene057637.t1.exon13;Parent=MS.gene057637.t1
chr4.2 CDS 36486540 36486614 36486540 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
chr4.2 exon 36486721 36486732 36486721 ID=MS.gene057637.t1.exon14;Parent=MS.gene057637.t1
chr4.2 CDS 36486721 36486732 36486721 ID=cds.MS.gene057637.t1;Parent=MS.gene057637.t1
Gene Sequence

>MS.gene057637

ATGTGTGACACTATGTCTGGACCTATTACTATTGATCAACCTGTTAAAGGTTAGTAAATCTATATTATTGCAATTCATTACACCTTTGCCTTTCATGGTCAATTTCTTAAACTTTGTTATTATTATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATCACGTTTGTATTAGAATATGAAATTTCAGGCCTTAAATTTGAACATAATTTTTTTATGTATGAAGCTGAGGAAAATGAAAAAATAGAAACTTTTTTTTGACACAAAAAAACAATGTAAATTGAATGCATCTTGTTCAAACTTTTGTTAGTAAGTCTTATTTTTTATTTTTTTTATTTTTTTAATTTATGCAAAAAACAGGTCTTGAGATTGAATATTTGGAGGATGAAAAGAGAACAAGGCTTGGATCCTTAAAGAAGGCAGCAATAAGTGCATCTTCTAAGTTCAAACATTCCTTCAAGAAGGGGCGAAGGCACAACAGGGTTATATCTGTCATCGAGGATGAAATCGATACAGAAGAGTTGCAGGCAATTGACGCTTTTCGTCAAACACTTATCCTAGAAGAACTATTACCCTCAAAACATGATGATCATCATATGATGCTAAGGTAGCCCTTGAGACTCATACAGTAAATAGCTGCAGCATCACCTTATGCTTTGATTAGACAGTTCTTAATGTGCTATTATTAATGTAATTATATGATAATGTAGATTCTTGAGAGCAAGGAAGTTTGACATTGAAAAAACAAAGCAAATGTGGGCAGATATGCTCCAATGGAGGAGGGAATTTGGTGCCGATACTATCATGGAGGTATTTTAGAGAAAAACTAAATATAAATTAAGAAAAACACTAATTGTAATTATATTGTTTTATGCAACATTTTAGTTATGTGACTAACATAAATTTCTTTCGGTTTTGTTAAGGATTTTGAATTCGAGGAGATAGACGAAGTTCTAAAATACTACCCTCAAGGAACACATGGAGTTGATAAGGATGGAAGACCTGTTTACATAGAAAGGTTGGGTTTGGTTGACTCAAACAAACTGATGCAAGTAACGACTATGGACCGATATCTTAAGTACCATGTACGAGAGTTTGAGAAGACATCCAATGTTAAGATGCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATCTTGGATGTCCAAGGAGTGGTATGTATCAAAATCATACAACACTAAATAACTTATTATAATTTGTATCATATTATAACTTGTTATATAAGTAAAGAAGTTTCAAATAAGTACTTACTGTATAGCATGGTTGATCAGGGTCTCAAAAGTATGAATAAAGCTGCAAGAGATCTCATCCAAGGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGGTACTATTTTTACCTACTCGAGCATATTGGTTCAAATGTAATCTTCTGACATTACCTTAGTTCCACTTTTCTTTTCATACAGTCCTTGAACCGTATGTTCATCATCAATGCTGGTTCGGGATTTAGGATTTTGTGGAACACAGTTAAGTCCTTCCTTGATCCCAAGACCACCTCGAAAATCCACGTAAGCTTTTTATTTTGTATTTTTTTTATATACTTAACAGTTTGAAGTAATGTTGAATTTCTAATTTCAGTTAAGTAGAAACATTAACCATATTACTAATTGATTGATCAGGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATCGATGCCAGGTCTATATTTTCTTCTTTATCATTGTAGTATTTTTTTTCTCTTTTTCTCATTAATCAAATTGATTAGTAAGCATGCTCTTTCAATCCATCCATATGTCACATAATACGAATAGCATTACTACTTAGTATTTAACTCCTTGTGTTTTTTGGGTTAACAGTGAACTTCCAGAGTTCTTGGGGGGTACTTGTACTTGTGCAGACAAAGGTGGTTGCATGCTTTCTGACAAGGGACCATGGAATGATCCAGAAATCTTGAAGGTAGTTTCACGGTAGAAAGATATAAAAAAAAATTGTTGAATAATTAGAAGAAAAAATAAATAGTGAAGTGTTTTTTTTTCCTGATGAATTAGATGGTTCAAAACGGTGAAGCAAAATGCAGAAGGAAAACTTTATCCGAAGTTGAGGAGAAAACAATCGTCGAAGACGAAGGAGTGTGTCAAAAGGTAGTTATCTTCCTACTTCTTTATAGTTTCAAGAGCATAGTTTGGTTATGAAACTTGATGTCCTTTCTTTTTCTTATGATATTCAGGGATGTGATTCTTTCAACAAAGAATACGTTCTCGAGGAGGCATGCCATGCTATAGCAGAAGTAAGTTTCATTACTTGATAAAATGTAAAACAAATGATGATTTCATATTCATTCCACTCACTTTCAATTTTGCAGGTAGCAAAACAATGTAATGCATATCAGTTCGACACCTTGGTCTCAATGAATGACAAACAAGTATCTTGGGAGGAATCAGTACAAAATGATCAAAAGGCACTTTCTAAAAGTATTTGATACTGTTCTGTGATTATTTTTACAGACAAATTTATTTTGTCAAGCATAATCAGCATACTCCATTTTATCAACACAGTAAAGAATGACTTAGATAAAATACTAAATAGATCATTTCCGTTGATGTGCAGATTGCTTTGGTAACAATGTATGCAAGAATGGATTTAGAAATCAATTTTCCGGCAGAATTATGGCCATGGTTTTGGGAATCATGACGTTCATCCGCATGACACGGAGTATACCAACAAAAATGACTGCAATTGCATTGTATGGTAACTCGGTATATATTGATGGCAATATGGTGAAAGCAGCACCTGTCATTTCCGTTGATGATCACATGGCTCTAATGAAGCGCATGACCGATCTAGAAGAGAAGGTGAATATTCTCAGCATGAGACCTTCCATGCCACCTGAAATGGAGGAATTGCTCAACAGTACTCTAAACCGTGTCGATACACTGGAGCAAGAGTTGGCTACAGCCAAGAAGGTACTGTTTTTCTTGCTACTTCACAATTTTATAATAATTTCAGAACATATTTGTAATTTATTTGTTCCTTTTTATTGGCATTAGGCACTTGATGATGCCCTTGCTAGGCAAGTGGAGCTTCAATCACATATCGACAAAAAGAAAAAGAAGAAAAAGTTGGTAGGTCATTTTAACTTTGACAATGATACATTACTTACCATGCATTGTTTCTATAAATATATACTTTCTTTTTATCTTATACAAGTTTCTGTGTTTGTGATTGCAGTTCCACTGGTAA
Protein sequence

>MS.gene057637.t1

MCDTMSGPITIDQPVKGLEIEYLEDEKRTRLGSLKKAAISASSKFKHSFKKGRRHNRVISVIEDEIDTEELQAIDAFRQTLILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLQWRREFGADTIMEDFEFEEIDEVLKYYPQGTHGVDKDGRPVYIERLGLVDSNKLMQVTTMDRYLKYHVREFEKTSNVKMPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQGLQKIDGDNYPESLNRMFIINAGSGFRILWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEAKCRRKTLSEVEEKTIVEDEGVCQKGCDSFNKEYVLEEACHAIAEVAKQCNAYQFDTLVSMNDKQVSWEESVQNDQKALSKNCFGNNVCKNGFRNQFSGRIMAMVLGIMTFIRMTRSIPTKMTAIALYGNSVYIDGNMVKAAPVISVDDHMALMKRMTDLEEKVNILSMRPSMPPEMEELLNSTLNRVDTLEQELATAKKALDDALARQVELQSHIDKKKKKKKLFHW