AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004015

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004015.t1 MTR_4g064350 96.654 807 27 0 1 807 1 807 0.0 1609
MS.gene004015.t1 MTR_7g096060 73.217 687 135 7 117 766 14 688 0.0 986
MS.gene004015.t1 MTR_7g078570 72.377 648 144 9 126 766 23 642 0.0 916
MS.gene004015.t1 MTR_6g059690 68.996 687 155 9 126 794 28 674 0.0 911
MS.gene004015.t1 MTR_1g044600 63.986 572 115 7 126 696 23 504 0.0 693
MS.gene004015.t1 MTR_0376s0020 76.404 445 86 4 320 761 1 429 0.0 686
MS.gene004015.t1 MTR_3g115110 48.673 452 214 6 320 757 249 696 7.31e-141 432
MS.gene004015.t1 MTR_2g438140 47.505 461 225 9 320 770 226 679 5.91e-133 411
MS.gene004015.t1 MTR_4g094662 48.230 452 216 9 320 759 229 674 2.75e-131 407
MS.gene004015.t1 MTR_7g010800 46.596 470 232 10 302 759 189 651 5.40e-131 405
MS.gene004015.t1 MTR_8g107160 54.430 395 68 6 402 794 49 333 2.86e-121 371
MS.gene004015.t1 MTR_2g438140 54.085 355 155 6 320 671 286 635 5.08e-121 380
MS.gene004015.t1 MTR_5g069780 45.175 456 228 10 293 728 284 737 8.28e-112 359
MS.gene004015.t1 MTR_3g104470 42.516 461 243 9 311 761 215 663 1.12e-111 356
MS.gene004015.t1 MTR_3g104480 42.333 463 243 9 312 767 218 663 1.54e-109 350
MS.gene004015.t1 MTR_1g028390 40.900 511 277 9 254 757 262 754 2.77e-109 352
MS.gene004015.t1 MTR_3g462930 44.651 430 218 6 320 731 304 731 5.19e-106 343
MS.gene004015.t1 MTR_5g075340 40.541 481 257 10 275 748 194 652 2.35e-102 336
MS.gene004015.t1 MTR_5g075360 39.111 450 253 9 307 748 3 439 2.39e-92 298
MS.gene004015.t1 MTR_5g075360 39.238 446 250 9 311 748 57 489 3.07e-91 297
MS.gene004015.t1 MTR_3g104490 36.383 470 259 8 304 767 191 626 6.97e-91 300
MS.gene004015.t1 MTR_5g075360 39.111 450 253 9 307 748 179 615 9.13e-91 299
MS.gene004015.t1 MTR_5g075360 39.238 446 250 9 311 748 233 665 8.85e-90 298
MS.gene004015.t1 MTR_8g469460 36.809 470 249 8 304 767 191 618 1.80e-89 296
MS.gene004015.t1 MTR_8g099605 34.861 502 274 11 302 761 148 638 1.81e-81 275
MS.gene004015.t1 MTR_8g099605 34.861 502 274 11 302 761 389 879 4.32e-80 276
MS.gene004015.t1 MTR_6g016600 50.000 272 132 1 311 582 308 575 2.18e-78 265
MS.gene004015.t1 MTR_2g101290 39.732 448 242 11 320 757 415 844 2.22e-78 271
MS.gene004015.t1 MTR_2g101290 46.711 304 156 4 320 622 415 713 4.85e-71 248
MS.gene004015.t1 MTR_3g096000 34.227 485 282 11 303 768 279 745 3.02e-69 245
MS.gene004015.t1 MTR_5g074850 35.022 454 255 13 312 748 494 924 1.00e-64 233
MS.gene004015.t1 MTR_4g094270 40.078 257 151 2 325 580 161 415 6.43e-55 195
MS.gene004015.t1 MTR_1g069105 43.725 247 135 3 322 567 190 433 9.77e-55 196
MS.gene004015.t1 MTR_7g099640 43.725 247 135 3 322 567 189 432 4.19e-54 194
MS.gene004015.t1 MTR_3g062510 38.824 255 152 3 307 560 146 397 1.37e-51 186
MS.gene004015.t1 MTR_7g099640 45.175 228 121 3 322 548 189 413 1.99e-51 186
MS.gene004015.t1 MTR_1g095660 38.376 271 157 4 309 572 107 374 3.66e-51 184
MS.gene004015.t1 MTR_1g083330 40.329 243 141 3 322 563 169 408 4.99e-51 185
MS.gene004015.t1 MTR_4g033235 40.329 243 141 3 322 563 170 409 6.73e-51 184
MS.gene004015.t1 MTR_8g056860 29.006 493 278 15 337 778 487 958 5.49e-50 190
MS.gene004015.t1 MTR_7g089040 41.434 251 140 4 319 566 684 930 4.49e-49 187
MS.gene004015.t1 MTR_7g089040 40.092 217 123 3 351 566 416 626 4.78e-31 131
MS.gene004015.t1 MTR_7g088830 39.764 254 140 5 319 566 657 903 5.34e-48 184
MS.gene004015.t1 MTR_7g088830 40.513 195 107 5 358 551 432 618 2.53e-29 125
MS.gene004015.t1 MTR_3g062510 43.137 204 114 2 305 507 144 346 1.49e-47 173
MS.gene004015.t1 MTR_7g088850 41.558 231 131 3 319 548 281 508 8.43e-47 176
MS.gene004015.t1 MTR_7g088850 30.317 221 135 5 339 548 29 241 7.17e-19 91.7
MS.gene004015.t1 MTR_1g063380 42.424 231 127 4 320 548 478 704 1.35e-46 179
MS.gene004015.t1 MTR_1g063380 42.149 242 131 4 309 548 194 428 5.76e-46 177
MS.gene004015.t1 MTR_3g117230 39.113 248 147 3 320 566 139 383 1.81e-46 171
MS.gene004015.t1 MTR_7g101870 42.358 229 126 4 322 548 481 705 2.18e-46 178
MS.gene004015.t1 MTR_7g101870 41.494 241 134 4 309 548 195 429 1.15e-45 176
MS.gene004015.t1 MTR_2g095210 42.735 234 122 5 320 548 406 632 2.21e-46 177
MS.gene004015.t1 MTR_2g095210 41.758 91 52 1 309 398 196 286 1.41e-13 75.1
MS.gene004015.t1 MTR_3g112260 39.113 248 147 3 320 566 136 380 2.62e-46 171
MS.gene004015.t1 MTR_1g069105 48.128 187 95 2 322 507 190 375 1.48e-45 169
MS.gene004015.t1 MTR_2g095320 41.909 241 129 4 309 548 142 372 1.76e-45 175
MS.gene004015.t1 MTR_2g095320 40.171 234 115 7 320 548 421 634 1.46e-37 150
MS.gene004015.t1 MTR_8g023550 35.849 265 151 4 309 572 154 400 1.63e-42 160
MS.gene004015.t1 MTR_7g088980 38.462 247 146 4 319 562 135 378 7.29e-41 155
MS.gene004015.t1 MTR_7g088980 38.393 112 58 3 459 562 9 117 1.81e-11 67.4
MS.gene004015.t1 MTR_2g007010 41.880 234 120 4 322 548 240 464 1.00e-40 161
MS.gene004015.t1 MTR_2g007010 39.035 228 134 3 320 546 528 751 1.52e-40 160
MS.gene004015.t1 MTR_7g088980 38.462 247 146 4 319 562 217 460 3.82e-40 155
MS.gene004015.t1 MTR_7g088980 35.593 177 85 7 404 562 34 199 1.01e-14 78.2
MS.gene004015.t1 MTR_7g088980 38.462 247 146 4 319 562 285 528 1.06e-39 155
MS.gene004015.t1 MTR_7g088980 35.000 260 133 9 325 562 22 267 1.31e-26 115
MS.gene004015.t1 MTR_7g088980 38.462 247 146 4 319 562 311 554 1.11e-39 155
MS.gene004015.t1 MTR_7g088980 36.123 227 116 7 354 562 78 293 1.84e-24 109
MS.gene004015.t1 MTR_7g089290 36.797 231 141 4 320 548 667 894 7.20e-39 156
MS.gene004015.t1 MTR_7g089290 36.797 231 141 4 320 548 639 866 8.40e-39 155
MS.gene004015.t1 MTR_2g086160 41.410 227 119 8 317 539 129 345 1.94e-37 144
MS.gene004015.t1 MTR_2g086160 41.410 227 119 8 317 539 129 345 1.71e-36 143
MS.gene004015.t1 MTR_4g053350 41.410 227 119 8 317 539 124 340 2.90e-36 142
MS.gene004015.t1 MTR_4g053350 41.410 227 119 8 317 539 124 340 3.36e-36 142
MS.gene004015.t1 MTR_8g099065 36.207 232 138 5 320 548 534 758 6.97e-36 146
MS.gene004015.t1 MTR_4g067100 32.951 349 206 9 235 566 292 629 7.92e-36 147
MS.gene004015.t1 MTR_4g067100 32.951 349 206 9 235 566 292 629 7.93e-36 147
MS.gene004015.t1 MTR_1g080430 33.594 256 147 3 270 503 606 860 5.31e-35 144
MS.gene004015.t1 MTR_1g080430 22.807 570 354 9 270 756 606 1172 7.22e-35 144
MS.gene004015.t1 MTR_3g023900 34.812 293 156 8 320 581 531 819 4.83e-34 140
MS.gene004015.t1 MTR_3g023900 36.475 244 136 4 315 546 229 465 1.29e-33 139
MS.gene004015.t1 MTR_3g023890 34.146 287 151 7 320 575 385 664 5.95e-34 139
MS.gene004015.t1 MTR_3g023890 35.841 226 123 5 322 535 94 309 1.93e-31 131
MS.gene004015.t1 MTR_6g033740 36.638 232 136 6 320 548 500 723 7.97e-34 139
MS.gene004015.t1 MTR_4g011810 33.535 331 184 11 290 593 208 529 1.22e-33 136
MS.gene004015.t1 MTR_5g009840 35.345 232 140 5 320 548 516 740 6.74e-33 137
MS.gene004015.t1 MTR_2g078630 32.946 258 160 5 299 548 43 295 4.43e-32 135
MS.gene004015.t1 MTR_1g101870 36.752 234 136 7 319 548 556 781 9.37e-32 133
MS.gene004015.t1 MTR_4g096870 37.975 237 138 7 320 554 119 348 9.46e-32 129
MS.gene004015.t1 MTR_2g078630 32.946 258 160 5 299 548 571 823 1.03e-31 134
MS.gene004015.t1 MTR_1g101870 36.752 234 136 7 319 548 504 729 1.08e-31 133
MS.gene004015.t1 MTR_1g099470 36.957 230 128 8 320 543 434 652 1.44e-31 132
MS.gene004015.t1 MTR_1g088730 36.052 233 138 6 320 548 932 1157 3.97e-31 132
MS.gene004015.t1 MTR_3g092070 36.402 239 128 9 320 548 81 305 5.30e-31 125
MS.gene004015.t1 MTR_3g092080 34.728 239 132 9 320 548 84 308 7.43e-31 125
MS.gene004015.t1 MTR_3g092070 36.402 239 128 9 320 548 81 305 7.86e-31 125
MS.gene004015.t1 MTR_3g092080 34.728 239 132 9 320 548 84 308 9.32e-31 125
MS.gene004015.t1 MTR_1g099480 35.371 229 136 6 319 543 467 687 1.02e-30 130
MS.gene004015.t1 MTR_1g088750 35.622 233 139 6 320 548 889 1114 1.16e-30 130
MS.gene004015.t1 MTR_1g088750 35.622 233 139 6 320 548 938 1163 1.20e-30 130
MS.gene004015.t1 MTR_3g089100 35.526 228 136 6 320 543 902 1122 9.88e-30 127
MS.gene004015.t1 MTR_3g089100 35.526 228 136 6 320 543 931 1151 9.89e-30 127
MS.gene004015.t1 MTR_3g089100 35.526 228 136 6 320 543 897 1117 9.94e-30 127
MS.gene004015.t1 MTR_4g088885 36.546 249 128 7 345 567 249 493 1.01e-29 126
MS.gene004015.t1 MTR_6g023855 33.205 259 161 7 292 544 215 467 1.45e-28 121
MS.gene004015.t1 MTR_7g075520 33.333 243 129 8 320 548 212 435 5.75e-28 119
MS.gene004015.t1 MTR_6g023875 35.391 243 141 7 308 544 370 602 5.80e-28 120
MS.gene004015.t1 MTR_3g104475 29.268 287 188 7 482 767 192 464 8.98e-28 118
MS.gene004015.t1 MTR_7g088980 35.000 260 133 9 325 562 22 267 7.65e-27 115
MS.gene004015.t1 MTR_7g088980 31.579 247 120 4 319 562 285 485 9.61e-24 106
MS.gene004015.t1 MTR_3g115110 34.375 192 110 5 580 757 300 489 1.44e-25 112
MS.gene004015.t1 MTR_3g115110 65.278 72 25 0 310 381 239 310 9.59e-21 97.1
MS.gene004015.t1 MTR_7g088980 36.123 227 116 7 354 562 78 293 1.18e-24 109
MS.gene004015.t1 MTR_7g088980 31.579 247 120 4 319 562 311 511 8.80e-24 106
MS.gene004015.t1 MTR_8g099065 37.427 171 99 4 320 487 534 699 8.58e-24 107
MS.gene004015.t1 MTR_2g024440 32.510 243 131 8 316 542 210 435 2.58e-23 104
MS.gene004015.t1 MTR_2g024440 32.510 243 131 8 316 542 293 518 2.97e-23 105
MS.gene004015.t1 MTR_2g024440 32.510 243 131 8 316 542 292 517 2.98e-23 105
MS.gene004015.t1 MTR_1g099480 37.572 173 99 5 319 487 467 634 1.70e-22 103
MS.gene004015.t1 MTR_6g023865 30.797 276 158 9 292 544 127 392 2.14e-22 102
MS.gene004015.t1 MTR_4g074920 30.303 231 126 7 320 543 669 871 3.55e-21 99.8
MS.gene004015.t1 MTR_8g469440 57.534 73 27 1 312 384 203 271 1.34e-19 90.9
MS.gene004015.t1 MTR_5g075370 31.004 229 123 7 495 715 482 683 1.05e-17 88.6
MS.gene004015.t1 MTR_4g083460 32.065 184 94 6 322 482 839 1014 1.46e-16 85.1
MS.gene004015.t1 MTR_4g112600 42.308 78 43 2 323 398 3 80 1.94e-13 66.6
MS.gene004015.t1 MTR_6g023845 27.099 262 145 10 292 544 85 309 2.91e-13 72.8
MS.gene004015.t1 MTR_3g103150 32.955 176 91 7 329 491 50 211 2.84e-12 68.6
MS.gene004015.t1 MTR_2g076970 29.843 191 121 5 322 507 199 381 4.10e-12 69.7
MS.gene004015.t1 MTR_5g020980 32.292 192 111 8 315 498 209 389 2.45e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004015.t1 AT1G07510 73.659 820 196 8 1 807 1 813 0.0 1182
MS.gene004015.t1 AT2G29080 73.049 820 194 13 1 807 4 809 0.0 1137
MS.gene004015.t1 AT1G50250 48.894 452 213 7 320 757 259 706 1.76e-140 432
MS.gene004015.t1 AT5G42270 48.009 452 217 6 320 757 247 694 9.74e-137 422
MS.gene004015.t1 AT1G06430 48.156 461 220 10 320 769 217 669 2.24e-132 410
MS.gene004015.t1 AT1G06430 48.156 461 220 10 320 769 217 669 2.24e-132 410
MS.gene004015.t1 AT1G06430 48.156 461 220 10 320 769 217 669 2.24e-132 410
MS.gene004015.t1 AT2G30950 47.722 461 222 10 320 769 228 680 1.89e-131 408
MS.gene004015.t1 AT2G30950 47.722 461 222 10 320 769 224 676 2.37e-131 407
MS.gene004015.t1 AT2G30950 47.722 461 222 10 320 769 224 676 2.37e-131 407
MS.gene004015.t1 AT2G30950 47.722 461 222 10 320 769 224 676 2.37e-131 407
MS.gene004015.t1 AT5G15250 47.095 482 233 12 302 771 204 675 1.00e-130 405
MS.gene004015.t1 AT2G26140 44.796 442 224 8 312 748 220 646 1.78e-113 361
MS.gene004015.t1 AT5G53170 42.315 501 270 9 261 757 299 784 6.29e-113 362
MS.gene004015.t1 AT5G58870 46.512 430 213 6 320 733 326 754 1.26e-112 362
MS.gene004015.t1 AT3G47060 46.279 430 214 7 320 733 322 750 6.66e-111 357
MS.gene004015.t1 AT5G15250 51.266 316 126 5 302 594 204 514 2.97e-98 315
MS.gene004015.t1 AT3G02450 51.724 261 121 2 314 573 324 580 1.10e-78 266
MS.gene004015.t1 AT4G23940 34.200 500 280 10 302 761 412 902 2.34e-76 266
MS.gene004015.t1 AT3G16290 37.778 450 253 10 320 758 407 840 1.06e-73 258
MS.gene004015.t1 AT5G64580 30.243 701 421 19 109 768 90 763 4.78e-70 248
MS.gene004015.t1 AT5G19990 40.467 257 150 2 325 580 105 359 6.76e-55 194
MS.gene004015.t1 AT5G19990 40.467 257 150 2 325 580 163 417 1.24e-54 195
MS.gene004015.t1 AT5G19990 40.467 257 150 2 325 580 163 417 1.24e-54 195
MS.gene004015.t1 AT1G53750 40.377 265 154 3 309 572 154 415 1.34e-54 195
MS.gene004015.t1 AT4G29040 43.725 247 135 3 322 567 187 430 1.34e-54 195
MS.gene004015.t1 AT5G20000 40.467 257 150 2 325 580 163 417 1.72e-54 194
MS.gene004015.t1 AT2G20140 43.725 247 135 3 322 567 187 430 6.75e-54 193
MS.gene004015.t1 AT1G53780 39.623 265 156 3 309 572 326 587 5.85e-53 194
MS.gene004015.t1 AT1G53780 39.623 265 156 3 309 572 326 587 5.85e-53 194
MS.gene004015.t1 AT1G53780 39.623 265 156 3 309 572 325 586 6.22e-53 194
MS.gene004015.t1 AT1G53780 39.623 265 156 3 309 572 347 608 6.71e-53 195
MS.gene004015.t1 AT5G58290 38.911 257 153 3 305 560 137 390 4.27e-52 187
MS.gene004015.t1 AT3G05530 41.152 243 139 3 322 563 170 409 4.35e-52 187
MS.gene004015.t1 AT1G09100 40.741 243 140 3 322 563 169 408 4.43e-52 187
MS.gene004015.t1 AT1G79560 27.728 559 347 14 268 781 439 985 1.75e-51 195
MS.gene004015.t1 AT1G79560 27.536 552 347 13 268 778 439 978 2.59e-51 194
MS.gene004015.t1 AT3G56690 40.637 251 142 4 319 566 720 966 4.12e-50 191
MS.gene004015.t1 AT3G56690 41.206 199 110 3 351 548 413 605 1.04e-34 143
MS.gene004015.t1 AT1G79560 28.261 506 317 12 268 739 439 932 5.16e-50 190
MS.gene004015.t1 AT5G03340 41.991 231 128 4 320 548 477 703 6.00e-47 180
MS.gene004015.t1 AT5G03340 41.085 258 141 5 309 564 193 441 8.16e-46 177
MS.gene004015.t1 AT3G53230 42.424 231 127 4 320 548 478 704 7.32e-47 180
MS.gene004015.t1 AT3G53230 40.316 253 144 4 309 560 194 440 2.14e-45 175
MS.gene004015.t1 AT5G43010 38.710 248 148 3 320 566 136 380 1.64e-46 171
MS.gene004015.t1 AT1G45000 38.710 248 148 3 320 566 136 380 2.20e-46 171
MS.gene004015.t1 AT3G09840 41.085 258 141 5 309 564 193 441 1.08e-45 176
MS.gene004015.t1 AT3G09840 41.304 230 132 2 320 548 477 704 1.43e-45 176
MS.gene004015.t1 AT3G01610 41.810 232 112 6 322 539 232 454 8.46e-40 158
MS.gene004015.t1 AT3G01610 34.828 290 165 7 303 575 508 790 1.69e-34 142
MS.gene004015.t1 AT3G01610 41.810 232 112 6 322 539 232 454 9.38e-40 158
MS.gene004015.t1 AT3G01610 34.828 290 165 7 303 575 508 790 1.60e-34 142
MS.gene004015.t1 AT2G03670 36.032 247 153 3 319 562 282 526 3.98e-38 151
MS.gene004015.t1 AT2G03670 30.719 306 186 8 324 612 23 319 3.61e-31 130
MS.gene004015.t1 AT1G03000 37.069 232 139 5 320 548 655 882 1.53e-37 152
MS.gene004015.t1 AT1G05910 34.459 296 179 6 288 576 348 635 1.64e-37 152
MS.gene004015.t1 AT1G64110 34.843 287 172 7 320 598 516 795 8.61e-37 149
MS.gene004015.t1 AT1G64110 34.843 287 172 7 320 598 516 795 8.61e-37 149
MS.gene004015.t1 AT1G64110 34.843 287 172 7 320 598 518 797 9.39e-37 149
MS.gene004015.t1 AT1G64110 34.843 287 172 7 320 598 518 797 9.39e-37 149
MS.gene004015.t1 AT1G64110 34.843 287 172 7 320 598 513 792 1.05e-36 149
MS.gene004015.t1 AT5G08470 36.481 233 127 6 322 546 843 1062 3.96e-35 144
MS.gene004015.t1 AT5G08470 36.481 233 127 6 322 546 834 1053 4.18e-35 144
MS.gene004015.t1 AT4G28000 35.776 232 138 5 320 548 517 740 8.08e-35 143
MS.gene004015.t1 AT4G28000 35.776 232 138 5 320 548 517 740 8.40e-35 142
MS.gene004015.t1 AT4G28000 35.776 232 138 5 320 548 515 738 8.86e-35 142
MS.gene004015.t1 AT3G04340 40.415 193 112 3 314 504 774 965 1.92e-34 142
MS.gene004015.t1 AT2G27600 39.474 228 122 9 317 539 126 342 9.47e-34 135
MS.gene004015.t1 AT5G52882 35.776 232 138 5 320 548 514 737 1.33e-33 139
MS.gene004015.t1 AT3G15120 36.910 233 132 5 322 546 728 953 3.74e-33 139
MS.gene004015.t1 AT3G15120 36.910 233 132 5 322 546 718 943 3.90e-33 139
MS.gene004015.t1 AT4G02480 31.126 302 171 7 320 591 960 1254 8.43e-33 137
MS.gene004015.t1 AT1G80350 36.364 275 138 10 320 566 236 501 3.54e-32 132
MS.gene004015.t1 AT2G03670 30.719 306 186 8 324 612 23 319 8.18e-32 129
MS.gene004015.t1 AT2G03670 39.286 140 84 1 319 457 282 421 2.12e-19 92.4
MS.gene004015.t1 AT5G53540 36.864 236 131 8 320 548 84 308 1.03e-31 129
MS.gene004015.t1 AT1G50140 35.931 231 131 7 320 543 689 909 1.11e-30 130
MS.gene004015.t1 AT1G50140 35.931 231 131 7 320 543 689 909 1.11e-30 130
MS.gene004015.t1 AT1G50140 35.931 231 131 7 320 543 711 931 1.30e-30 130
MS.gene004015.t1 AT1G50140 35.931 231 131 7 320 543 711 931 1.30e-30 130
MS.gene004015.t1 AT1G50140 35.931 231 131 7 320 543 711 931 1.30e-30 130
MS.gene004015.t1 AT2G45500 34.000 250 140 9 308 548 70 303 1.65e-30 124
MS.gene004015.t1 AT2G45500 34.000 250 140 9 308 548 70 303 1.65e-30 124
MS.gene004015.t1 AT1G02890 29.801 302 175 7 320 591 941 1235 2.56e-30 129
MS.gene004015.t1 AT3G19740 35.965 228 135 7 320 543 701 921 6.89e-30 127
MS.gene004015.t1 AT2G45500 34.000 250 140 9 308 548 203 436 7.21e-30 124
MS.gene004015.t1 AT4G27680 36.017 236 133 8 320 548 81 305 8.25e-30 123
MS.gene004015.t1 AT2G45500 34.000 250 140 9 308 548 207 440 8.99e-30 124
MS.gene004015.t1 AT2G45500 34.000 250 140 9 308 548 213 446 1.02e-29 124
MS.gene004015.t1 AT2G34560 37.662 231 136 7 320 548 100 324 2.27e-29 121
MS.gene004015.t1 AT2G34560 37.662 231 136 7 320 548 109 333 3.15e-29 121
MS.gene004015.t1 AT4G04910 37.288 236 122 8 345 564 239 464 9.38e-29 123
MS.gene004015.t1 AT3G27120 34.979 243 142 7 308 544 388 620 1.85e-27 119
MS.gene004015.t1 AT4G24860 34.211 228 139 6 320 543 815 1035 3.46e-27 119
MS.gene004015.t1 AT4G24860 34.211 228 139 6 320 543 790 1010 3.64e-27 119
MS.gene004015.t1 AT4G24860 34.211 228 139 6 320 543 817 1037 3.71e-27 119
MS.gene004015.t1 AT4G24860 34.211 228 139 6 320 543 813 1033 3.83e-27 119
MS.gene004015.t1 AT4G04180 29.316 307 169 10 261 542 249 532 9.17e-26 113
MS.gene004015.t1 AT4G04180 29.316 307 169 10 261 542 254 537 9.93e-26 113
MS.gene004015.t1 AT1G62130 32.035 231 128 7 320 543 750 958 1.27e-23 107
MS.gene004015.t1 AT1G62130 32.035 231 128 7 320 543 743 951 1.37e-23 107
MS.gene004015.t1 AT1G45000 40.288 139 81 2 320 457 136 273 8.22e-23 100
MS.gene004015.t1 AT5G08470 35.526 152 87 4 322 469 843 987 1.70e-19 94.7
MS.gene004015.t1 AT1G02890 26.490 302 157 8 320 591 941 1207 2.17e-19 94.4
MS.gene004015.t1 AT5G17760 31.148 183 96 7 322 489 218 385 1.58e-11 68.2

Find 209 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGGAACTCTCTGGTTTA+TGG 0.154517 4.3:+39504024 MS.gene004015:CDS
GCAAGATTGGGAACGCTTTA+TGG 0.172434 4.3:+39501459 MS.gene004015:CDS
TGCGCCAGCCCTGTTGATTT+TGG 0.182881 4.3:+39504006 MS.gene004015:CDS
GTGCCATTTCTTTCCATATC+TGG 0.205745 4.3:+39504535 MS.gene004015:CDS
CAGGGTGAGAAACTTGTTTC+TGG 0.216719 4.3:+39504597 MS.gene004015:CDS
TTTAAATATGTAATCAATAT+TGG 0.218480 4.3:+39503860 MS.gene004015:CDS
TGAAACCATAGATGGCTATT+TGG 0.222849 4.3:-39506149 None:intergenic
CCAAGCTCTTCGTATTTCTT+AGG 0.226217 4.3:-39504424 None:intergenic
TATTGATTACATATTTAAAT+TGG 0.233644 4.3:-39503856 None:intergenic
CATATCTGGTTCTGATTTCA+TGG 0.234533 4.3:+39504549 MS.gene004015:CDS
CTTCGCTGTCTGCTTGATTA+AGG 0.241757 4.3:-39503799 None:intergenic
CTCATCAATAAATACTATAC+TGG 0.248136 4.3:-39504638 None:intergenic
TGCTGTTGCAGGTTGGTTCT+TGG 0.252343 4.3:+39505636 MS.gene004015:CDS
CAGGACAAAGGAGCAGCTTT+TGG 0.256747 4.3:+39505750 MS.gene004015:CDS
TTCTCTGCAGATTAGTTTCC+AGG 0.261767 4.3:+39503685 MS.gene004015:intron
TTTATCGATGATGTTGAAAA+TGG 0.267533 4.3:+39501501 MS.gene004015:CDS
AGAGTTCCTCACATATATTT+TGG 0.268782 4.3:-39503774 None:intergenic
CTCAAAATGACGACGCGTTT+GGG 0.272158 4.3:+39506199 MS.gene004015:CDS
CCTCAAAATGACGACGCGTT+TGG 0.275529 4.3:+39506198 MS.gene004015:CDS
GATGATGTTGAAAATGGATT+AGG 0.287741 4.3:+39501507 MS.gene004015:CDS
TCAAATAAATCTGAAATATC+TGG 0.292729 4.3:-39504891 None:intergenic
AGATGACTTGGTTCGAATCT+TGG 0.302830 4.3:+39506377 MS.gene004015:CDS
ATTGATGTACCTGACATTAA+AGG 0.319955 4.3:+39504862 MS.gene004015:CDS
CGAGGCAAAGCAAGAAATTA+TGG 0.326964 4.3:+39504378 MS.gene004015:CDS
AGGAAAGTGCAAGGTGGATT+TGG 0.333587 4.3:+39504049 MS.gene004015:CDS
CATGAAATCAGAACCAGATA+TGG 0.334227 4.3:-39504548 None:intergenic
ATGATGTTGAAAATGGATTA+GGG 0.334363 4.3:+39501508 MS.gene004015:CDS
TTGGGAACTCTCTGGTTTAT+GGG 0.337589 4.3:+39504025 MS.gene004015:CDS
AAATCAATTGTTGGTGGAAA+TGG 0.339562 4.3:+39504732 MS.gene004015:CDS
AATTCCAAAAGGTGCTCTTC+TGG 0.340894 4.3:+39504453 MS.gene004015:CDS
TGGTGGTCGGGCTGCCGAGC+AGG 0.341124 4.3:+39505792 MS.gene004015:CDS
GCCCTTACTCCAGGATTTGC+TGG 0.341796 4.3:+39504964 MS.gene004015:CDS
CCTTTGCAGGAAGGGTTCCT+TGG 0.342572 4.3:-39503823 None:intergenic
TGTGGGTTCTGCACTCTTGA+AGG 0.349056 4.3:-39506409 None:intergenic
TCTGCCATAGCTCGTAATAA+TGG 0.355581 4.3:+39501552 MS.gene004015:CDS
CGATAGGATCATTGGTGGTT+TGG 0.356353 4.3:+39505080 MS.gene004015:CDS
GAAACCATAGATGGCTATTT+GGG 0.358295 4.3:-39506148 None:intergenic
CTGCCATAGCTCGTAATAAT+GGG 0.361252 4.3:+39501553 MS.gene004015:CDS
GATGACTTGGTTCGAATCTT+GGG 0.367294 4.3:+39506378 MS.gene004015:CDS
TTGATCAGGAAGTGCGAGAT+TGG 0.371100 4.3:+39506253 MS.gene004015:CDS
CAACAGCATGGCCTGCTTCA+TGG 0.372235 4.3:-39505621 None:intergenic
TGGCCACCAGATCCCTTTGC+AGG 0.378325 4.3:-39503836 None:intergenic
CCTCGCGGCACAGCAGCACT+TGG 0.379585 4.3:+39505694 MS.gene004015:CDS
TTTCTTTCATCCCTTTCTCT+TGG 0.380958 4.3:+39502305 MS.gene004015:CDS
TGTTATATATTCTTCTGAAA+TGG 0.383217 4.3:+39503958 MS.gene004015:CDS
GTTGCACGGTGAAGCAAGAT+TGG 0.387025 4.3:+39501446 MS.gene004015:CDS
GGTTCTCACTAGGAACATAT+TGG 0.390805 4.3:-39505723 None:intergenic
TATATTCTTCTGAAATGGTT+TGG 0.391866 4.3:+39503963 MS.gene004015:CDS
TTCGCTGTCTGCTTGATTAA+GGG 0.399007 4.3:-39503798 None:intergenic
AAAGCAACTGCAGGGGAGTC+TGG 0.399715 4.3:+39504511 MS.gene004015:CDS
ACCCTTCCTGCAAAGGGATC+TGG 0.404556 4.3:+39503830 MS.gene004015:CDS
TATGCCCAAATAGCCATCTA+TGG 0.410083 4.3:+39506144 MS.gene004015:CDS
TTGATGCAATTGGTCGGAAA+AGG 0.411767 4.3:+39504662 MS.gene004015:CDS
CCCACCAGAAGAGCACCTTT+TGG 0.413587 4.3:-39504457 None:intergenic
AGGGGTCGTGGAGGTTTCTC+TGG 0.415439 4.3:+39504682 MS.gene004015:CDS
AGAGAGTTCCCAAAATCAAC+AGG 0.415902 4.3:-39504015 None:intergenic
AAACTATCTCACCCCATTGT+TGG 0.420910 4.3:+39502271 MS.gene004015:CDS
GTGTTCTTCTATAAGCTGTA+TGG 0.421606 4.3:-39506298 None:intergenic
AAACCATACAGCGGCGATAC+TGG 0.423477 4.3:+39506222 MS.gene004015:CDS
AACTATGTGGGAACAACCTC+AGG 0.425530 4.3:-39506531 None:intergenic
TTGTATGACCCTTGGTGGTC+GGG 0.425818 4.3:+39505780 MS.gene004015:CDS
TTCTGAAATGGTTTGGTACC+AGG 0.426278 4.3:+39503970 MS.gene004015:CDS
GGTGGATTTGGTGTTGGTGG+TGG 0.427309 4.3:+39504061 MS.gene004015:CDS
CAAGGTGGATTTGGTGTTGG+TGG 0.428799 4.3:+39504058 MS.gene004015:CDS
GAAGCAGGCCATGCTGTTGC+AGG 0.430567 4.3:+39505625 MS.gene004015:CDS
CTTAAATCTATCGTAATTTG+TGG 0.441735 4.3:-39506427 None:intergenic
ATGTCTGCTCCAGCAAATCC+TGG 0.444210 4.3:-39504973 None:intergenic
GTGGTTTGGAGAAGAAGAAC+AGG 0.451185 4.3:+39505094 MS.gene004015:CDS
GAACCAGATATGGAAAGAAA+TGG 0.451853 4.3:-39504538 None:intergenic
GGTGTTGGTGGTGGCTCCAC+TGG 0.453849 4.3:+39504070 MS.gene004015:CDS
CTCCAGCAAATCCTGGAGTA+AGG 0.456693 4.3:-39504966 None:intergenic
ATTTGTTGGAGACAACAATA+TGG 0.457579 4.3:-39503745 None:intergenic
AAGTACTTTAAATCAATTGT+TGG 0.458092 4.3:+39504723 MS.gene004015:CDS
ATTTCAGAAGAATATATAAC+AGG 0.458585 4.3:-39503956 None:intergenic
TTAAATCTATCGTAATTTGT+GGG 0.460225 4.3:-39506426 None:intergenic
TTACCAGTATCGCCGCTGTA+TGG 0.460948 4.3:-39506225 None:intergenic
GTTCTCACTAGGAACATATT+GGG 0.461038 4.3:-39505722 None:intergenic
ATTGATGAGATTGATGCAAT+TGG 0.464604 4.3:+39504652 MS.gene004015:CDS
TACTGGTAACATCATTGATC+AGG 0.465960 4.3:+39506239 MS.gene004015:CDS
TCTCACCCCATTGTTGGTGG+TGG 0.465963 4.3:+39502277 MS.gene004015:CDS
ATGGAAATGTTTGTCGGTGT+TGG 0.466679 4.3:+39504568 MS.gene004015:CDS
CACTGGAGCACAAAATGACT+TGG 0.469816 4.3:+39506101 MS.gene004015:CDS
ATAGTCCCACCACCAACAAT+GGG 0.471876 4.3:-39502283 None:intergenic
GAAGGAAGTGCCAAAGGGAG+AGG 0.474904 4.3:+39501798 MS.gene004015:CDS
ACCAGATCCCTTTGCAGGAA+GGG 0.475185 4.3:-39503831 None:intergenic
GTGGGTTCTGCACTCTTGAA+GGG 0.475380 4.3:-39506408 None:intergenic
GATTTCATGGAAATGTTTGT+CGG 0.475383 4.3:+39504562 MS.gene004015:CDS
CTCATTGGAGCAATCTCCAC+TGG 0.475680 4.3:+39506084 MS.gene004015:CDS
TTGCACGGTGAAGCAAGATT+GGG 0.476061 4.3:+39501447 MS.gene004015:CDS
TGATGCAATTGGTCGGAAAA+GGG 0.476507 4.3:+39504663 MS.gene004015:CDS
ATTACGATAGATTTAAGCTA+GGG 0.479014 4.3:+39506433 MS.gene004015:CDS
TTGGTGGAAATGGATGGTTT+TGG 0.480220 4.3:+39504742 MS.gene004015:CDS
TTGTCGGTGTTGGACCATCC+AGG 0.481495 4.3:+39504578 MS.gene004015:CDS
TATTTGGGCATATGTCATCT+TGG 0.483350 4.3:-39506133 None:intergenic
TGAAGACCCACCACCCTCCT+TGG 0.483888 4.3:-39506499 None:intergenic
CTCGCGGCACAGCAGCACTT+GGG 0.487871 4.3:+39505695 MS.gene004015:CDS
GCTGGAGTTGTTGTGCTAGC+AGG 0.490258 4.3:+39504772 MS.gene004015:CDS
GATGAAGCCAAGGAGGGTGG+TGG 0.491766 4.3:+39506492 MS.gene004015:CDS
TGCCTAGGTAATAAGTAAGC+TGG 0.491812 4.3:+39505579 MS.gene004015:intron
AGCCTTCATATTATTCTCAA+AGG 0.492433 4.3:+39504935 MS.gene004015:CDS
GCAGCTATCGATAGGATCAT+TGG 0.493752 4.3:+39505072 MS.gene004015:CDS
TTCCTAGTGAGAACCTTCTC+AGG 0.496104 4.3:+39505731 MS.gene004015:CDS
GATCACGAGGACCAAGAGAA+AGG 0.498134 4.3:-39502316 None:intergenic
ACCCTCCTTGGCTTCATCGA+CGG 0.499935 4.3:-39506487 None:intergenic
GACAACGCCTTACTTAGGCC+TGG 0.501131 4.3:+39504817 MS.gene004015:CDS
GGAAAAGAAGGAAGTGCCAA+AGG 0.503043 4.3:+39501792 MS.gene004015:CDS
TACTTTAAATCAATTGTTGG+TGG 0.503402 4.3:+39504726 MS.gene004015:CDS
GATATGACTTGTATGACCCT+TGG 0.505273 4.3:+39505772 MS.gene004015:CDS
AGATTCGAACCAAGTCATCT+TGG 0.507271 4.3:-39506374 None:intergenic
CAAGGAACCCTTCCTGCAAA+GGG 0.510654 4.3:+39503824 MS.gene004015:CDS
TGATCAGGAAGTGCGAGATT+GGG 0.511795 4.3:+39506254 MS.gene004015:CDS
GAAAACATGCGATGAAGCCT+AGG 0.512524 4.3:-39501618 None:intergenic
AATCAATTGCTGCAAACCCT+AGG 0.513115 4.3:+39501601 MS.gene004015:CDS
ACAATATGGTCTACTAATCC+TGG 0.514715 4.3:-39503731 None:intergenic
TCCAAAAGGTGCTCTTCTGG+TGG 0.519532 4.3:+39504456 MS.gene004015:CDS
CTTGTATGACCCTTGGTGGT+CGG 0.520582 4.3:+39505779 MS.gene004015:CDS
AAACCCATTATTACGAGCTA+TGG 0.521150 4.3:-39501556 None:intergenic
CCAAGGAACCCTTCCTGCAA+AGG 0.522628 4.3:+39503823 MS.gene004015:CDS
AGGCTTGCAGCCCTTACTCC+AGG 0.523091 4.3:+39504955 MS.gene004015:CDS
AATAGTCCCACCACCAACAA+TGG 0.523458 4.3:-39502284 None:intergenic
AAAACGCCCAGGCCTAAGTA+AGG 0.525242 4.3:-39504824 None:intergenic
CAAACATAAACTTAACTATG+TGG 0.526794 4.3:-39506544 None:intergenic
TCGCTGTCTGCTTGATTAAG+GGG 0.530649 4.3:-39503797 None:intergenic
ACCGTTGCTTACCATGAAGC+AGG 0.531277 4.3:+39505610 MS.gene004015:CDS
CTCCTTGGCTTCATCGACGG+TGG 0.532013 4.3:-39506484 None:intergenic
ATCACGAGGACCAAGAGAAA+GGG 0.533495 4.3:-39502315 None:intergenic
AATTACGATAGATTTAAGCT+AGG 0.533611 4.3:+39506432 MS.gene004015:CDS
ATTGGTCGGAAAAGGGGTCG+TGG 0.536073 4.3:+39504670 MS.gene004015:CDS
CACCAGATCCCTTTGCAGGA+AGG 0.536420 4.3:-39503832 None:intergenic
CTCGGCAGCCCGACCACCAA+GGG 0.536999 4.3:-39505788 None:intergenic
GGTCGTGGAATATTTAACAT+TGG 0.540391 4.3:+39504100 MS.gene004015:CDS
CCTAAGAAATACGAAGAGCT+TGG 0.541178 4.3:+39504424 MS.gene004015:CDS
CGTATTTCTTAGGATTCTTG+AGG 0.544887 4.3:-39504414 None:intergenic
TCAAAGTCAAACACAGAGGA+TGG 0.545037 4.3:+39502212 MS.gene004015:CDS
GTGCAAGGTGGATTTGGTGT+TGG 0.545995 4.3:+39504055 MS.gene004015:CDS
TGGTCACGACCTTTAATGTC+AGG 0.547707 4.3:-39504871 None:intergenic
TGGTCCTCGTGATCAGCAGC+AGG 0.548339 4.3:+39502325 MS.gene004015:CDS
AGCCTTTGAGAATAATATGA+AGG 0.549153 4.3:-39504937 None:intergenic
GTTCCCAAAATCAACAGGGC+TGG 0.550216 4.3:-39504010 None:intergenic
CTCACCCCATTGTTGGTGGT+GGG 0.551716 4.3:+39502278 MS.gene004015:CDS
CTTGGTGCCAAAATTCCAAA+AGG 0.552017 4.3:+39504442 MS.gene004015:CDS
TATTAGACAACGCCTTACTT+AGG 0.552358 4.3:+39504812 MS.gene004015:CDS
AAACATAAACTTAACTATGT+GGG 0.552385 4.3:-39506543 None:intergenic
GCGCAAATCTCATTAACTCC+TGG 0.554538 4.3:-39503988 None:intergenic
CTATCTCACCCCATTGTTGG+TGG 0.556416 4.3:+39502274 MS.gene004015:CDS
TAAGCTAGGGTTTCAAGATG+AGG 0.556661 4.3:+39506446 MS.gene004015:CDS
CAGGCCATGCTGTTGCAGGT+TGG 0.560076 4.3:+39505629 MS.gene004015:CDS
GCTGCTCCTTTGTCCTGAGA+AGG 0.560952 4.3:-39505744 None:intergenic
ACAACGCCTTACTTAGGCCT+GGG 0.561103 4.3:+39504818 MS.gene004015:CDS
GAACTCTCTGGTTTATGGGA+AGG 0.561814 4.3:+39504029 MS.gene004015:CDS
AACAAGTTTCTCACCCTGGA+TGG 0.565612 4.3:-39504592 None:intergenic
AGGTAATAAGTAAGCTGGAA+AGG 0.566130 4.3:+39505584 MS.gene004015:intron
TCCACTGGTAAGAATGGTCG+TGG 0.570992 4.3:+39504085 MS.gene004015:CDS
TCATCAATAAATACTATACT+GGG 0.572453 4.3:-39504637 None:intergenic
AGTACTTCACCAAGATGACT+TGG 0.572458 4.3:+39506365 MS.gene004015:CDS
GAAACTTGTTTCTGGAAGCA+AGG 0.572866 4.3:+39504605 MS.gene004015:CDS
GAGGAAGCGCAAGAAGCACT+AGG 0.572888 4.3:+39503911 MS.gene004015:CDS
GAAAAGAAGGAAGTGCCAAA+GGG 0.575045 4.3:+39501793 MS.gene004015:CDS
GCTCGGCAGCCCGACCACCA+AGG 0.576079 4.3:-39505789 None:intergenic
TCCACGACCATTCTTACCAG+TGG 0.580385 4.3:-39504086 None:intergenic
TCCAGCAAATCCTGGAGTAA+GGG 0.580747 4.3:-39504965 None:intergenic
CCAAAAGGTGCTCTTCTGGT+GGG 0.582841 4.3:+39504457 MS.gene004015:CDS
ATCGTGCGGTCAAAACGCCC+AGG 0.591416 4.3:-39504835 None:intergenic
CAGAAACAAGTTTCTCACCC+TGG 0.591544 4.3:-39504596 None:intergenic
GTCTTCACCTCTAGAACCTG+AGG 0.592909 4.3:+39506515 MS.gene004015:CDS
ACAATAGTTACTTTCAACAA+TGG 0.594322 4.3:-39505670 None:intergenic
GGTGGCTCCACTGGTAAGAA+TGG 0.599960 4.3:+39504079 MS.gene004015:CDS
ATGACTTGTATGACCCTTGG+TGG 0.602845 4.3:+39505775 MS.gene004015:CDS
AACCACCGTCGATGAAGCCA+AGG 0.603186 4.3:+39506482 MS.gene004015:CDS
TGGTTTGGAGAAGAAGAACA+GGG 0.606026 4.3:+39505095 MS.gene004015:CDS
AAAACATGCGATGAAGCCTA+GGG 0.607666 4.3:-39501617 None:intergenic
GCCTGCTTCATGGTAAGCAA+CGG 0.609319 4.3:-39505611 None:intergenic
CTTCCTGCAAAGGGATCTGG+TGG 0.609552 4.3:+39503833 MS.gene004015:CDS
GATGCAATTGGTCGGAAAAG+GGG 0.610099 4.3:+39504664 MS.gene004015:CDS
GTCGATGAAGCCAAGGAGGG+TGG 0.610117 4.3:+39506489 MS.gene004015:CDS
AAATGATGAAACAACCTGCT+CGG 0.612044 4.3:-39505806 None:intergenic
TGTCGGTGTTGGACCATCCA+GGG 0.613071 4.3:+39504579 MS.gene004015:CDS
CACCGTCGATGAAGCCAAGG+AGG 0.615453 4.3:+39506485 MS.gene004015:CDS
GTCCTGAGAAGGTTCTCACT+AGG 0.616189 4.3:-39505733 None:intergenic
GCTATCGATAGGATCATTGG+TGG 0.616670 4.3:+39505075 MS.gene004015:CDS
ATGAAGCCAAGGAGGGTGGT+GGG 0.619072 4.3:+39506493 MS.gene004015:CDS
CAAGCAGACAGCGAAGTCCA+AGG 0.624939 4.3:+39503806 MS.gene004015:CDS
CAATTGTTGGTGGAAATGGA+TGG 0.625755 4.3:+39504736 MS.gene004015:CDS
GAGAATAATATGAAGGCTCG+TGG 0.628614 4.3:-39504930 None:intergenic
ATGAGATTGATGCAATTGGT+CGG 0.631846 4.3:+39504656 MS.gene004015:CDS
CTTACCTGCTGCTGATCACG+AGG 0.632040 4.3:-39502329 None:intergenic
GGAACAACCTCAGGTTCTAG+AGG 0.634295 4.3:-39506522 None:intergenic
AAGCTGCTCTGATTGCTGCA+AGG 0.638573 4.3:+39505013 MS.gene004015:CDS
TGATGAATCACAAGTCACAA+TGG 0.642219 4.3:+39505038 MS.gene004015:CDS
GGTCGGAAAAGGGGTCGTGG+AGG 0.642405 4.3:+39504673 MS.gene004015:CDS
TAGCACAACAACTCCAGCAG+TGG 0.652358 4.3:-39504767 None:intergenic
AGAACCAACCTGCAACAGCA+TGG 0.654487 4.3:-39505633 None:intergenic
GTCATGTAGAATTTGTTGCA+CGG 0.655486 4.3:+39501432 MS.gene004015:intron
ACCGTCGATGAAGCCAAGGA+GGG 0.657299 4.3:+39506486 MS.gene004015:CDS
ATGGGAAGGAAAGTGCAAGG+TGG 0.659337 4.3:+39504043 MS.gene004015:CDS
TGAGAACCTTCTCAGGACAA+AGG 0.663177 4.3:+39505738 MS.gene004015:CDS
AAGTCAAACACAGAGGATGG+AGG 0.663945 4.3:+39502215 MS.gene004015:CDS
CCAAGTGCTGCTGTGCCGCG+AGG 0.668668 4.3:-39505694 None:intergenic
TTTAGCAAAAGCAACTGCAG+GGG 0.671935 4.3:+39504504 MS.gene004015:CDS
GTACATCAATTGATATCGTG+CGG 0.677345 4.3:-39504849 None:intergenic
CAGTTGCCAAAATATATGTG+AGG 0.694454 4.3:+39503768 MS.gene004015:CDS
AAAGTAACTATTGTTCCTCG+CGG 0.694758 4.3:+39505679 MS.gene004015:CDS
ACAGCTTATAGAAGAACACA+AGG 0.695122 4.3:+39506302 MS.gene004015:CDS
TTTATGGGAAGGAAAGTGCA+AGG 0.696455 4.3:+39504040 MS.gene004015:CDS
AGATGTTGCTGGCTGTGACG+AGG 0.714294 4.3:+39504360 MS.gene004015:CDS
GAGAGTTCCCAAAATCAACA+GGG 0.722016 4.3:-39504014 None:intergenic
TAGTCCCACCACCAACAATG+GGG 0.742812 4.3:-39502282 None:intergenic
TGAGTCAAAGTCAAACACAG+AGG 0.760960 4.3:+39502208 MS.gene004015:CDS
GCGTTTGGGAAACCATACAG+CGG 0.791210 4.3:+39506213 MS.gene004015:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATAAAAAACAAAC+AGG - chr4.3:39505135-39505154 None:intergenic 10.0%
!! TTTAAATATGTAATCAATAT+TGG + chr4.3:39503860-39503879 MS.gene004015:CDS 10.0%
!!! CTTTATTAATGATTTTTAAT+TGG + chr4.3:39501409-39501428 MS.gene004015:intron 10.0%
!!! TATTGATTACATATTTAAAT+TGG - chr4.3:39503859-39503878 None:intergenic 10.0%
!!! TTAAAATATAAAATGTTTTC+TGG + chr4.3:39505167-39505186 MS.gene004015:intron 10.0%
!!! TTATTTTAATTTTCTTATGT+GGG + chr4.3:39502384-39502403 MS.gene004015:intron 10.0%
!! AAGAAAATTAAAATAACAAC+CGG - chr4.3:39502380-39502399 None:intergenic 15.0%
!! ATAAGCTAATTTATTCAAAA+TGG - chr4.3:39503253-39503272 None:intergenic 15.0%
!! ATTACAAAAAAATAATTCTG+TGG - chr4.3:39505370-39505389 None:intergenic 15.0%
!! TGAAATAATTCATTATATCT+TGG + chr4.3:39505886-39505905 MS.gene004015:intron 15.0%
!!! GTTATTTTAATTTTCTTATG+TGG + chr4.3:39502383-39502402 MS.gene004015:intron 15.0%
!!! TATTTTAATTTTCTTATGTG+GGG + chr4.3:39502385-39502404 MS.gene004015:intron 15.0%
!!! TGAAAATCATGTTTTTTTAT+GGG - chr4.3:39503308-39503327 None:intergenic 15.0%
!!! TTGAAAATCATGTTTTTTTA+TGG - chr4.3:39503309-39503328 None:intergenic 15.0%
!! AAGTACTTTAAATCAATTGT+TGG + chr4.3:39504723-39504742 MS.gene004015:CDS 20.0%
!! AATTAACGAATCAAATTGAT+GGG - chr4.3:39501374-39501393 None:intergenic 20.0%
!! ACAATTATCTGAAGATTATA+TGG + chr4.3:39505497-39505516 MS.gene004015:intron 20.0%
!! ATAACTTCAAATATATTGCA+AGG + chr4.3:39502353-39502372 MS.gene004015:intron 20.0%
!! ATGTGAAACAAAATAAGTAA+TGG - chr4.3:39505913-39505932 None:intergenic 20.0%
!! ATTTCAGAAGAATATATAAC+AGG - chr4.3:39503959-39503978 None:intergenic 20.0%
!! TATTATCAGTAGTTGAAAAA+AGG - chr4.3:39505535-39505554 None:intergenic 20.0%
!! TATTATCATATTGCTAATGT+GGG + chr4.3:39503651-39503670 MS.gene004015:intron 20.0%
!! TCATCAATAAATACTATACT+GGG - chr4.3:39504640-39504659 None:intergenic 20.0%
!! TTATTATCATATTGCTAATG+TGG + chr4.3:39503650-39503669 MS.gene004015:intron 20.0%
!! TTATTTGAATTCATTTGTTC+AGG + chr4.3:39504327-39504346 MS.gene004015:intron 20.0%
!! TTTGTTGATATCTTAACATA+GGG - chr4.3:39503168-39503187 None:intergenic 20.0%
!!! ATTTTAATTTTCTTATGTGG+GGG + chr4.3:39502386-39502405 MS.gene004015:intron 20.0%
!!! GTCTTAATTTTGATGAAATT+GGG + chr4.3:39501693-39501712 MS.gene004015:intron 20.0%
!!! TCAAATAAATCTGAAATATC+TGG - chr4.3:39504894-39504913 None:intergenic 20.0%
!!! TGTCTTAATTTTGATGAAAT+TGG + chr4.3:39501692-39501711 MS.gene004015:intron 20.0%
!!! TGTTATATATTCTTCTGAAA+TGG + chr4.3:39503958-39503977 MS.gene004015:CDS 20.0%
!!! TTAAATCTATCGTAATTTGT+GGG - chr4.3:39506429-39506448 None:intergenic 20.0%
!!! TTTTGTTGATATCTTAACAT+AGG - chr4.3:39503169-39503188 None:intergenic 20.0%
! AAAAATACCAAAAACAAGGT+TGG + chr4.3:39504148-39504167 MS.gene004015:intron 25.0%
! AAAACAGTTCAAGATAATGT+TGG - chr4.3:39503372-39503391 None:intergenic 25.0%
! AAACATAAGTTTACAAGTCA+GGG + chr4.3:39502506-39502525 MS.gene004015:intron 25.0%
! AAGATATGTATCTGCATATT+TGG + chr4.3:39503452-39503471 MS.gene004015:intron 25.0%
! AATATGCAGATACATATCTT+AGG - chr4.3:39503452-39503471 None:intergenic 25.0%
! AATTACGATAGATTTAAGCT+AGG + chr4.3:39506432-39506451 MS.gene004015:CDS 25.0%
! AATTACTCTCAATTAGTGTT+GGG + chr4.3:39501964-39501983 MS.gene004015:intron 25.0%
! AGACAAAAATACCAAAAACA+AGG + chr4.3:39504144-39504163 MS.gene004015:CDS 25.0%
! AGATATGTATCTGCATATTT+GGG + chr4.3:39503453-39503472 MS.gene004015:intron 25.0%
! AGCAATGAATAAAAGAAAAG+AGG - chr4.3:39505849-39505868 None:intergenic 25.0%
! ATCTCATGACTTACAATATT+GGG - chr4.3:39506028-39506047 None:intergenic 25.0%
! ATTACGATAGATTTAAGCTA+GGG + chr4.3:39506433-39506452 MS.gene004015:CDS 25.0%
! CAAAGAAAAAGAGTAAGTTA+GGG + chr4.3:39501652-39501671 MS.gene004015:intron 25.0%
! CTAATAGTATTCTTGTGTAA+TGG - chr4.3:39502919-39502938 None:intergenic 25.0%
! CTCATCAATAAATACTATAC+TGG - chr4.3:39504641-39504660 None:intergenic 25.0%
! CTGATACTATCTTAGAATTT+GGG - chr4.3:39502579-39502598 None:intergenic 25.0%
! CTTAAATCTATCGTAATTTG+TGG - chr4.3:39506430-39506449 None:intergenic 25.0%
! GAACATAAGTTTATAAGTGA+GGG + chr4.3:39502736-39502755 MS.gene004015:intron 25.0%
! GAATTAACGAATCAAATTGA+TGG - chr4.3:39501375-39501394 None:intergenic 25.0%
! GACTTGTAAACTTATGTTTA+AGG - chr4.3:39502505-39502524 None:intergenic 25.0%
! GTGATTTATTCTTCATGAAT+TGG + chr4.3:39504170-39504189 MS.gene004015:intron 25.0%
! TAAACATAAGTTTACAAGTC+AGG + chr4.3:39502505-39502524 MS.gene004015:intron 25.0%
! TAAAGCTCGAATATGTAATA+CGG + chr4.3:39502999-39503018 MS.gene004015:intron 25.0%
! TACTTTAAATCAATTGTTGG+TGG + chr4.3:39504726-39504745 MS.gene004015:CDS 25.0%
! TATCTGAAGATTATATGGAT+TGG + chr4.3:39505502-39505521 MS.gene004015:intron 25.0%
! TCTGATACTATCTTAGAATT+TGG - chr4.3:39502580-39502599 None:intergenic 25.0%
! TGAACATAAGTTTATAAGTG+AGG + chr4.3:39502735-39502754 MS.gene004015:intron 25.0%
! TTTATCGATGATGTTGAAAA+TGG + chr4.3:39501501-39501520 MS.gene004015:CDS 25.0%
! TTTGATGAAATTGGGAAAAT+GGG + chr4.3:39501701-39501720 MS.gene004015:intron 25.0%
!! AAAAACAAACAGGCTTTTAA+AGG - chr4.3:39505125-39505144 None:intergenic 25.0%
!! ACAATAGTTACTTTCAACAA+TGG - chr4.3:39505673-39505692 None:intergenic 25.0%
!! ATCGATGTTCAATTTTCAAT+CGG - chr4.3:39502851-39502870 None:intergenic 25.0%
!! ATTACATATTCGAGCTTTAT+AGG - chr4.3:39502998-39503017 None:intergenic 25.0%
!! CTAACTTACTCTTTTTCTTT+GGG - chr4.3:39501653-39501672 None:intergenic 25.0%
!! GGAGTTTAAAAATAAGCTTT+TGG + chr4.3:39503706-39503725 MS.gene004015:CDS 25.0%
!! TAACTTACTCTTTTTCTTTG+GGG - chr4.3:39501652-39501671 None:intergenic 25.0%
!! TAATTTAAGACATCATGATG+AGG + chr4.3:39505461-39505480 MS.gene004015:intron 25.0%
!! TTCTCTCAATCATATGATTT+TGG + chr4.3:39502057-39502076 MS.gene004015:intron 25.0%
!! TTTGAGGTATTTATATGTGT+GGG + chr4.3:39502096-39502115 MS.gene004015:intron 25.0%
!! TTTTGATGAAATTGGGAAAA+TGG + chr4.3:39501700-39501719 MS.gene004015:intron 25.0%
!!! AAAAACATGATTTTCAAGTC+TGG + chr4.3:39503312-39503331 MS.gene004015:intron 25.0%
!!! AAAATGGATTAGGGTTTTTA+AGG + chr4.3:39501517-39501536 MS.gene004015:CDS 25.0%
!!! AAAGCTTATTTTTAAACTCC+TGG - chr4.3:39503706-39503725 None:intergenic 25.0%
!!! AAATGGATTAGGGTTTTTAA+GGG + chr4.3:39501518-39501537 MS.gene004015:CDS 25.0%
!!! ATAACAATTTTGATACGTCT+AGG + chr4.3:39503504-39503523 MS.gene004015:intron 25.0%
!!! ATGATGTTGAAAATGGATTA+GGG + chr4.3:39501508-39501527 MS.gene004015:CDS 25.0%
!!! GTTTATTTTAAAGATGTTGC+TGG + chr4.3:39504349-39504368 MS.gene004015:CDS 25.0%
!!! TATAAAATGTTTTCTGGCTT+TGG + chr4.3:39505173-39505192 MS.gene004015:intron 25.0%
!!! TATATTCTTCTGAAATGGTT+TGG + chr4.3:39503963-39503982 MS.gene004015:CDS 25.0%
!!! TGTATATCAGTGTTTTTTTG+TGG - chr4.3:39505982-39506001 None:intergenic 25.0%
!!! TTATGAAAAGTTTTATCCCA+AGG + chr4.3:39501771-39501790 MS.gene004015:CDS 25.0%
!!! TTTTAATTTTCTTATGTGGG+GGG + chr4.3:39502387-39502406 MS.gene004015:intron 25.0%
!!! TTTTGAGGTATTTATATGTG+TGG + chr4.3:39502095-39502114 MS.gene004015:intron 25.0%
AAACTTCATCTCATTCAATG+TGG - chr4.3:39502716-39502735 None:intergenic 30.0%
AACTTCATCTCATTCAATGT+GGG - chr4.3:39502715-39502734 None:intergenic 30.0%
AAGAGGTGAGTAAACAAAAT+TGG - chr4.3:39505832-39505851 None:intergenic 30.0%
ACATATCTTAGGAAAGATGA+AGG - chr4.3:39503441-39503460 None:intergenic 30.0%
AGCCTTCATATTATTCTCAA+AGG + chr4.3:39504935-39504954 MS.gene004015:CDS 30.0%
ATTGAGAGAAAACATGTTGT+TGG - chr4.3:39502047-39502066 None:intergenic 30.0%
ATTGATGAGATTGATGCAAT+TGG + chr4.3:39504652-39504671 MS.gene004015:CDS 30.0%
ATTGATGTACCTGACATTAA+AGG + chr4.3:39504862-39504881 MS.gene004015:CDS 30.0%
CATATCTTAGGAAAGATGAA+GGG - chr4.3:39503440-39503459 None:intergenic 30.0%
CATCTCATGACTTACAATAT+TGG - chr4.3:39506029-39506048 None:intergenic 30.0%
CCAAAGAAAAAGAGTAAGTT+AGG + chr4.3:39501651-39501670 MS.gene004015:intron 30.0%
GAATTACTCTCAATTAGTGT+TGG + chr4.3:39501963-39501982 MS.gene004015:intron 30.0%
GAGAAAAAATCTGAGTCTAA+AGG + chr4.3:39501820-39501839 MS.gene004015:CDS 30.0%
GATCTATAAATATCCGTGTT+CGG + chr4.3:39502439-39502458 MS.gene004015:intron 30.0%
GATTTCATGGAAATGTTTGT+CGG + chr4.3:39504562-39504581 MS.gene004015:CDS 30.0%
TAATGTTGGACTTCTTGAAT+TGG - chr4.3:39503358-39503377 None:intergenic 30.0%
TACTATCTTAGAATTTGGGT+TGG - chr4.3:39502575-39502594 None:intergenic 30.0%
TATGGTTTCAGTGAAAAAGT+GGG + chr4.3:39506162-39506181 MS.gene004015:CDS 30.0%
TCAAAATGGTTGTGAATTGT+TGG - chr4.3:39503239-39503258 None:intergenic 30.0%
TTAAAATGTGAGACAGTTGT+AGG - chr4.3:39503415-39503434 None:intergenic 30.0%
TTAACTCATCCTTACAAAAC+TGG - chr4.3:39502780-39502799 None:intergenic 30.0%
TTCAAATATATTGCAAGGTC+CGG + chr4.3:39502358-39502377 MS.gene004015:intron 30.0%
TTGAGAGAAAACATGTTGTT+GGG - chr4.3:39502046-39502065 None:intergenic 30.0%
! AAATCAATTGTTGGTGGAAA+TGG + chr4.3:39504732-39504751 MS.gene004015:CDS 30.0%
! ACTATCTTAGAATTTGGGTT+GGG - chr4.3:39502574-39502593 None:intergenic 30.0%
! AGAGTTCCTCACATATATTT+TGG - chr4.3:39503777-39503796 None:intergenic 30.0%
! AGCCTTTGAGAATAATATGA+AGG - chr4.3:39504940-39504959 None:intergenic 30.0%
! ATTTGTTGGAGACAACAATA+TGG - chr4.3:39503748-39503767 None:intergenic 30.0%
! CCTAACTTACTCTTTTTCTT+TGG - chr4.3:39501654-39501673 None:intergenic 30.0%
! GATGATGTTGAAAATGGATT+AGG + chr4.3:39501507-39501526 MS.gene004015:CDS 30.0%
! GTTAAGCTGTTTAAAACAGT+CGG + chr4.3:39505199-39505218 MS.gene004015:intron 30.0%
! TCTTGTGTTATTGTTAGTTG+TGG + chr4.3:39501878-39501897 MS.gene004015:intron 30.0%
! TTGAGGTATTTATATGTGTG+GGG + chr4.3:39502097-39502116 MS.gene004015:intron 30.0%
! TTTTTCACTGAAACCATAGA+TGG - chr4.3:39506160-39506179 None:intergenic 30.0%
!! AACATCTAGCCTTAGAATAT+GGG - chr4.3:39502809-39502828 None:intergenic 30.0%
!! TAACATCTAGCCTTAGAATA+TGG - chr4.3:39502810-39502829 None:intergenic 30.0%
!!! AAAAATAAGCTTTTGGAACC+AGG + chr4.3:39503713-39503732 MS.gene004015:CDS 30.0%
!!! AATGGATTAGGGTTTTTAAG+GGG + chr4.3:39501519-39501538 MS.gene004015:CDS 30.0%
!!! TAAATCACCAACCTTGTTTT+TGG - chr4.3:39504158-39504177 None:intergenic 30.0%
!!! TATTTTGGCAACTGATTTGT+TGG - chr4.3:39503762-39503781 None:intergenic 30.0%
!!! TCATGTTTTTTTATGGGTGA+TGG - chr4.3:39503302-39503321 None:intergenic 30.0%
!!! TCTGTACTGGTTTAATTTTG+AGG + chr4.3:39502080-39502099 MS.gene004015:intron 30.0%
AAACCCATTATTACGAGCTA+TGG - chr4.3:39501559-39501578 None:intergenic 35.0%
AAAGTAACTATTGTTCCTCG+CGG + chr4.3:39505679-39505698 MS.gene004015:CDS 35.0%
AAATGATGAAACAACCTGCT+CGG - chr4.3:39505809-39505828 None:intergenic 35.0%
AAGTCATGAGATGAGTATGA+TGG + chr4.3:39506036-39506055 MS.gene004015:intron 35.0%
AATACTCATGTTTCTTGCCT+AGG + chr4.3:39505564-39505583 MS.gene004015:intron 35.0%
ACAACTCCCTAAAGAAAAAG+TGG - chr4.3:39504260-39504279 None:intergenic 35.0%
ACAATATGGTCTACTAATCC+TGG - chr4.3:39503734-39503753 None:intergenic 35.0%
ACAGCTTATAGAAGAACACA+AGG + chr4.3:39506302-39506321 MS.gene004015:CDS 35.0%
ACTTCATCTCATTCAATGTG+GGG - chr4.3:39502714-39502733 None:intergenic 35.0%
AGTTTGTCTTGCGATAAATG+GGG + chr4.3:39502144-39502163 MS.gene004015:intron 35.0%
ATACCAAGCAAGCAAAAACA+TGG - chr4.3:39502965-39502984 None:intergenic 35.0%
ATGAGATTGATGCAATTGGT+CGG + chr4.3:39504656-39504675 MS.gene004015:CDS 35.0%
CAGTTGCCAAAATATATGTG+AGG + chr4.3:39503768-39503787 MS.gene004015:CDS 35.0%
CAGTTTGTCTTGCGATAAAT+GGG + chr4.3:39502143-39502162 MS.gene004015:intron 35.0%
CATGAAATCAGAACCAGATA+TGG - chr4.3:39504551-39504570 None:intergenic 35.0%
CCTAAAGAAAAAGTGGACAT+GGG - chr4.3:39504253-39504272 None:intergenic 35.0%
CGTATTTCTTAGGATTCTTG+AGG - chr4.3:39504417-39504436 None:intergenic 35.0%
CTATGGTTTCAGTGAAAAAG+TGG + chr4.3:39506161-39506180 MS.gene004015:CDS 35.0%
GAAACCATAGATGGCTATTT+GGG - chr4.3:39506151-39506170 None:intergenic 35.0%
GAACCAGATATGGAAAGAAA+TGG - chr4.3:39504541-39504560 None:intergenic 35.0%
GGTCGTGGAATATTTAACAT+TGG + chr4.3:39504100-39504119 MS.gene004015:CDS 35.0%
GTACATCAATTGATATCGTG+CGG - chr4.3:39504852-39504871 None:intergenic 35.0%
GTGTTCTTCTATAAGCTGTA+TGG - chr4.3:39506301-39506320 None:intergenic 35.0%
GTTCTCACTAGGAACATATT+GGG - chr4.3:39505725-39505744 None:intergenic 35.0%
TAAACCCAACCCATATTCTA+AGG + chr4.3:39502797-39502816 MS.gene004015:intron 35.0%
TACTGGTAACATCATTGATC+AGG + chr4.3:39506239-39506258 MS.gene004015:CDS 35.0%
TATTAGACAACGCCTTACTT+AGG + chr4.3:39504812-39504831 MS.gene004015:CDS 35.0%
TATTTGGGCATATGTCATCT+TGG - chr4.3:39506136-39506155 None:intergenic 35.0%
TGAAACCATAGATGGCTATT+TGG - chr4.3:39506152-39506171 None:intergenic 35.0%
TGATGAATCACAAGTCACAA+TGG + chr4.3:39505038-39505057 MS.gene004015:CDS 35.0%
TTAACACACTCACACCTTTA+CGG - chr4.3:39502687-39502706 None:intergenic 35.0%
TTCCAGCTTACTTATTACCT+AGG - chr4.3:39505584-39505603 None:intergenic 35.0%
TTTCTTTCATCCCTTTCTCT+TGG + chr4.3:39502305-39502324 MS.gene004015:CDS 35.0%
! AGTCACAATGGATCATTTTG+AGG + chr4.3:39505050-39505069 MS.gene004015:CDS 35.0%
! ATGGTTTCTGTCCCTTTTTA+CGG + chr4.3:39506055-39506074 MS.gene004015:intron 35.0%
! GAAGTGTTAAAAATTGCTGC+TGG - chr4.3:39502172-39502191 None:intergenic 35.0%
! GTTTTATCCCAAGGAAAAGA+AGG + chr4.3:39501780-39501799 MS.gene004015:CDS 35.0%
! TAAAGGTGTGAGTGTGTTAA+GGG + chr4.3:39502687-39502706 MS.gene004015:intron 35.0%
! TGAGGTATTTATATGTGTGG+GGG + chr4.3:39502098-39502117 MS.gene004015:intron 35.0%
! TTTTAGCAAAAGCAACTGCA+GGG + chr4.3:39504503-39504522 MS.gene004015:CDS 35.0%
!! ACTTACTGACCAGTTTTGTA+AGG + chr4.3:39502768-39502787 MS.gene004015:intron 35.0%
!! ACTTTTTCTTTAGGGAGTTG+TGG + chr4.3:39504259-39504278 MS.gene004015:intron 35.0%
!! CATATCTGGTTCTGATTTCA+TGG + chr4.3:39504549-39504568 MS.gene004015:CDS 35.0%
!! CATATGATTTTGGTCTGTAC+TGG + chr4.3:39502067-39502086 MS.gene004015:intron 35.0%
!! GTCATGTAGAATTTGTTGCA+CGG + chr4.3:39501432-39501451 MS.gene004015:intron 35.0%
!! TACAATATTGGGAAGCATCA+AGG - chr4.3:39506017-39506036 None:intergenic 35.0%
!! TTTCCATGTTTTTGCTTGCT+TGG + chr4.3:39502959-39502978 MS.gene004015:intron 35.0%
!!! AAGAGCACCTTTTGGAATTT+TGG - chr4.3:39504452-39504471 None:intergenic 35.0%
!!! CCATGTCCACTTTTTCTTTA+GGG + chr4.3:39504251-39504270 MS.gene004015:intron 35.0%
!!! TGCAGTTGCTTTTGCTAAAA+GGG - chr4.3:39504503-39504522 None:intergenic 35.0%
AAAACATGCGATGAAGCCTA+GGG - chr4.3:39501620-39501639 None:intergenic 40.0%
AAACTATCTCACCCCATTGT+TGG + chr4.3:39502271-39502290 MS.gene004015:CDS 40.0%
AACTCAAACAATGCCGAACA+CGG - chr4.3:39502455-39502474 None:intergenic 40.0%
AATCAATTGCTGCAAACCCT+AGG + chr4.3:39501601-39501620 MS.gene004015:CDS 40.0%
AATGAGAACCTGCCGTAAAA+AGG - chr4.3:39506070-39506089 None:intergenic 40.0%
AATGGTTGTGAATTGTTGGC+TGG - chr4.3:39503235-39503254 None:intergenic 40.0%
AGAAAAAGTGGACATGGGAA+AGG - chr4.3:39504248-39504267 None:intergenic 40.0%
AGACGTGTGGTTCAATTCAA+AGG - chr4.3:39503577-39503596 None:intergenic 40.0%
AGAGAGTTCCCAAAATCAAC+AGG - chr4.3:39504018-39504037 None:intergenic 40.0%
AGATTCGAACCAAGTCATCT+TGG - chr4.3:39506377-39506396 None:intergenic 40.0%
AGTACTTCACCAAGATGACT+TGG + chr4.3:39506365-39506384 MS.gene004015:CDS 40.0%
ATGAGAACCTGCCGTAAAAA+GGG - chr4.3:39506069-39506088 None:intergenic 40.0%
ATGGAAATGTTTGTCGGTGT+TGG + chr4.3:39504568-39504587 MS.gene004015:CDS 40.0%
CAATACTTCGAGGTTACACA+TGG - chr4.3:39503538-39503557 None:intergenic 40.0%
CAATTCAAAGGCTCGCATAT+CGG - chr4.3:39503565-39503584 None:intergenic 40.0%
CATGTGTAACCTCGAAGTAT+TGG + chr4.3:39503536-39503555 MS.gene004015:intron 40.0%
CCAAGCTCTTCGTATTTCTT+AGG - chr4.3:39504427-39504446 None:intergenic 40.0%
CCAGTTTGTCTTGCGATAAA+TGG + chr4.3:39502142-39502161 MS.gene004015:intron 40.0%
CCATTTATCGCAAGACAAAC+TGG - chr4.3:39502145-39502164 None:intergenic 40.0%
CCCTAAAGAAAAAGTGGACA+TGG - chr4.3:39504254-39504273 None:intergenic 40.0%
CCTAAGAAATACGAAGAGCT+TGG + chr4.3:39504424-39504443 MS.gene004015:CDS 40.0%
CCTTACAAAACTGTCTAGTG+AGG - chr4.3:39502541-39502560 None:intergenic 40.0%
CGAGGCAAAGCAAGAAATTA+TGG + chr4.3:39504378-39504397 MS.gene004015:CDS 40.0%
CTGCCATAGCTCGTAATAAT+GGG + chr4.3:39501553-39501572 MS.gene004015:CDS 40.0%
GAGAATAATATGAAGGCTCG+TGG - chr4.3:39504933-39504952 None:intergenic 40.0%
GAGAGTTCCCAAAATCAACA+GGG - chr4.3:39504017-39504036 None:intergenic 40.0%
GATGACTCTACATCTTTGTC+TGG + chr4.3:39503608-39503627 MS.gene004015:intron 40.0%
GGAAAGGCAATGATCAACTA+GGG - chr4.3:39504232-39504251 None:intergenic 40.0%
GGTTCTCACTAGGAACATAT+TGG - chr4.3:39505726-39505745 None:intergenic 40.0%
TAAGCTAGGGTTTCAAGATG+AGG + chr4.3:39506446-39506465 MS.gene004015:CDS 40.0%
TATCGGATACCAATACTTCG+AGG - chr4.3:39503548-39503567 None:intergenic 40.0%
TATGCCCAAATAGCCATCTA+TGG + chr4.3:39506144-39506163 MS.gene004015:CDS 40.0%
TCAAAGTCAAACACAGAGGA+TGG + chr4.3:39502212-39502231 MS.gene004015:CDS 40.0%
TCTGCCATAGCTCGTAATAA+TGG + chr4.3:39501552-39501571 MS.gene004015:CDS 40.0%
TGAGTCAAAGTCAAACACAG+AGG + chr4.3:39502208-39502227 MS.gene004015:CDS 40.0%
TGATGCAATTGGTCGGAAAA+GGG + chr4.3:39504663-39504682 MS.gene004015:CDS 40.0%
TGCCTAGGTAATAAGTAAGC+TGG + chr4.3:39505579-39505598 MS.gene004015:intron 40.0%
TTCGCTGTCTGCTTGATTAA+GGG - chr4.3:39503801-39503820 None:intergenic 40.0%
TTGAGTTAAGAGTCCTACAC+TGG + chr4.3:39502468-39502487 MS.gene004015:intron 40.0%
TTGATGCAATTGGTCGGAAA+AGG + chr4.3:39504662-39504681 MS.gene004015:CDS 40.0%
TTTAGCAAAAGCAACTGCAG+GGG + chr4.3:39504504-39504523 MS.gene004015:CDS 40.0%
! AAAGGTGTGAGTGTGTTAAG+GGG + chr4.3:39502688-39502707 MS.gene004015:intron 40.0%
! AATTTTCTTATGTGGGGGGA+GGG + chr4.3:39502391-39502410 MS.gene004015:intron 40.0%
! CAATTGTTGGTGGAAATGGA+TGG + chr4.3:39504736-39504755 MS.gene004015:CDS 40.0%
! CTTTTAGCAAAAGCAACTGC+AGG + chr4.3:39504502-39504521 MS.gene004015:CDS 40.0%
! GATATGACTTGTATGACCCT+TGG + chr4.3:39505772-39505791 MS.gene004015:CDS 40.0%
! GTAAAGGTGTGAGTGTGTTA+AGG + chr4.3:39502686-39502705 MS.gene004015:intron 40.0%
! GTCCTACACTGGATTAGATA+AGG + chr4.3:39502479-39502498 MS.gene004015:intron 40.0%
! TAATTTTCTTATGTGGGGGG+AGG + chr4.3:39502390-39502409 MS.gene004015:intron 40.0%
! TGGTTTGGAGAAGAAGAACA+GGG + chr4.3:39505095-39505114 MS.gene004015:CDS 40.0%
! TTATGGGTGATGGTAATGTG+AGG - chr4.3:39503292-39503311 None:intergenic 40.0%
! TTGGGAACTCTCTGGTTTAT+GGG + chr4.3:39504025-39504044 MS.gene004015:CDS 40.0%
! TTGGTGGAAATGGATGGTTT+TGG + chr4.3:39504742-39504761 MS.gene004015:CDS 40.0%
! TTTATGGGAAGGAAAGTGCA+AGG + chr4.3:39504040-39504059 MS.gene004015:CDS 40.0%
! TTTGGGAACTCTCTGGTTTA+TGG + chr4.3:39504024-39504043 MS.gene004015:CDS 40.0%
! TTTTTACGGCAGGTTCTCAT+TGG + chr4.3:39506069-39506088 MS.gene004015:intron 40.0%
!! AATTCCAAAAGGTGCTCTTC+TGG + chr4.3:39504453-39504472 MS.gene004015:CDS 40.0%
!! AGATGACTTGGTTCGAATCT+TGG + chr4.3:39506377-39506396 MS.gene004015:CDS 40.0%
!! CCTCACTAGACAGTTTTGTA+AGG + chr4.3:39502538-39502557 MS.gene004015:intron 40.0%
!! CTAGCCTTAGAATATGGGTT+GGG - chr4.3:39502804-39502823 None:intergenic 40.0%
!! CTTGGTGCCAAAATTCCAAA+AGG + chr4.3:39504442-39504461 MS.gene004015:CDS 40.0%
!! GAAAAGAAGGAAGTGCCAAA+GGG + chr4.3:39501793-39501812 MS.gene004015:CDS 40.0%
!! GAAACTTGTTTCTGGAAGCA+AGG + chr4.3:39504605-39504624 MS.gene004015:CDS 40.0%
!! GATGACTTGGTTCGAATCTT+GGG + chr4.3:39506378-39506397 MS.gene004015:CDS 40.0%
!! GTCTTTTGAGGAGAAGTTAG+AGG + chr4.3:39503892-39503911 MS.gene004015:CDS 40.0%
!! GTGCCATTTCTTTCCATATC+TGG + chr4.3:39504535-39504554 MS.gene004015:CDS 40.0%
!! TCTAGCCTTAGAATATGGGT+TGG - chr4.3:39502805-39502824 None:intergenic 40.0%
!! TTCTCTGCAGATTAGTTTCC+AGG + chr4.3:39503685-39503704 MS.gene004015:intron 40.0%
!! TTCTGAAATGGTTTGGTACC+AGG + chr4.3:39503970-39503989 MS.gene004015:CDS 40.0%
!!! ATTTTGAGGCAGCTATCGAT+AGG + chr4.3:39505064-39505083 MS.gene004015:CDS 40.0%
!!! CCCATGTCCACTTTTTCTTT+AGG + chr4.3:39504250-39504269 MS.gene004015:intron 40.0%
!!! CTGCAGTTGCTTTTGCTAAA+AGG - chr4.3:39504504-39504523 None:intergenic 40.0%
!!! GATTTTTTCTCCTCTCCCTT+TGG - chr4.3:39501811-39501830 None:intergenic 40.0%
!!! TGGAAGTGTTGAGTCTTTTG+AGG + chr4.3:39503880-39503899 MS.gene004015:CDS 40.0%
!!! TGTTGATTTTGGGAACTCTC+TGG + chr4.3:39504017-39504036 MS.gene004015:CDS 40.0%
AACAAGTTTCTCACCCTGGA+TGG - chr4.3:39504595-39504614 None:intergenic 45.0%
AAGTCAAACACAGAGGATGG+AGG + chr4.3:39502215-39502234 MS.gene004015:CDS 45.0%
AATAGTCCCACCACCAACAA+TGG - chr4.3:39502287-39502306 None:intergenic 45.0%
AGACAGTTGTAGGACATCAG+TGG - chr4.3:39503405-39503424 None:intergenic 45.0%
ATAGTCCCACCACCAACAAT+GGG - chr4.3:39502286-39502305 None:intergenic 45.0%
ATCACGAGGACCAAGAGAAA+GGG - chr4.3:39502318-39502337 None:intergenic 45.0%
CACTGGAGCACAAAATGACT+TGG + chr4.3:39506101-39506120 MS.gene004015:CDS 45.0%
CAGAAACAAGTTTCTCACCC+TGG - chr4.3:39504599-39504618 None:intergenic 45.0%
CTCAAAATGACGACGCGTTT+GGG + chr4.3:39506199-39506218 MS.gene004015:CDS 45.0%
CTTCGCTGTCTGCTTGATTA+AGG - chr4.3:39503802-39503821 None:intergenic 45.0%
GAAAACATGCGATGAAGCCT+AGG - chr4.3:39501621-39501640 None:intergenic 45.0%
GATGCAATTGGTCGGAAAAG+GGG + chr4.3:39504664-39504683 MS.gene004015:CDS 45.0%
GCAAGATTGGGAACGCTTTA+TGG + chr4.3:39501459-39501478 MS.gene004015:CDS 45.0%
GCAGCTATCGATAGGATCAT+TGG + chr4.3:39505072-39505091 MS.gene004015:CDS 45.0%
GCGCAAATCTCATTAACTCC+TGG - chr4.3:39503991-39504010 None:intergenic 45.0%
GCTATCGATAGGATCATTGG+TGG + chr4.3:39505075-39505094 MS.gene004015:CDS 45.0%
GGGAAAGGCAATGATCAACT+AGG - chr4.3:39504233-39504252 None:intergenic 45.0%
TCCAGCAAATCCTGGAGTAA+GGG - chr4.3:39504968-39504987 None:intergenic 45.0%
TCGCTGTCTGCTTGATTAAG+GGG - chr4.3:39503800-39503819 None:intergenic 45.0%
TCTCATTGCTAAGAGACGTG+TGG - chr4.3:39503590-39503609 None:intergenic 45.0%
TGAGAACCTTCTCAGGACAA+AGG + chr4.3:39505738-39505757 MS.gene004015:CDS 45.0%
TGGTCACGACCTTTAATGTC+AGG - chr4.3:39504874-39504893 None:intergenic 45.0%
TTCCTAGTGAGAACCTTCTC+AGG + chr4.3:39505731-39505750 MS.gene004015:CDS 45.0%
TTGCACGGTGAAGCAAGATT+GGG + chr4.3:39501447-39501466 MS.gene004015:CDS 45.0%
TTGGAGAAGAAGAACAGGGT+AGG + chr4.3:39505099-39505118 MS.gene004015:intron 45.0%
! AAAAGGGTTTTTCCTGTGCC+TGG - chr4.3:39504487-39504506 None:intergenic 45.0%
! AAAGGGTTTTTCCTGTGCCT+GGG - chr4.3:39504486-39504505 None:intergenic 45.0%
! AGGAAAGTGCAAGGTGGATT+TGG + chr4.3:39504049-39504068 MS.gene004015:CDS 45.0%
! ATGACTTGTATGACCCTTGG+TGG + chr4.3:39505775-39505794 MS.gene004015:CDS 45.0%
! ATTTTCTTATGTGGGGGGAG+GGG + chr4.3:39502392-39502411 MS.gene004015:intron 45.0%
! CAGGGTGAGAAACTTGTTTC+TGG + chr4.3:39504597-39504616 MS.gene004015:CDS 45.0%
! CGATAGGATCATTGGTGGTT+TGG + chr4.3:39505080-39505099 MS.gene004015:CDS 45.0%
! GAACTCTCTGGTTTATGGGA+AGG + chr4.3:39504029-39504048 MS.gene004015:CDS 45.0%
! GGCACTTCCTTCTTTTCCTT+GGG - chr4.3:39501790-39501809 None:intergenic 45.0%
! GGCCTTATCTAATCCAGTGT+AGG - chr4.3:39502484-39502503 None:intergenic 45.0%
! GTGGTTTGGAGAAGAAGAAC+AGG + chr4.3:39505094-39505113 MS.gene004015:CDS 45.0%
! TGATCAGGAAGTGCGAGATT+GGG + chr4.3:39506254-39506273 MS.gene004015:CDS 45.0%
! TGGCACTTCCTTCTTTTCCT+TGG - chr4.3:39501791-39501810 None:intergenic 45.0%
! TTGATCAGGAAGTGCGAGAT+TGG + chr4.3:39506253-39506272 MS.gene004015:CDS 45.0%
! TTTCTGTCCCTTTTTACGGC+AGG + chr4.3:39506059-39506078 MS.gene004015:intron 45.0%
!! CAAACGCGTCGTCATTTTGA+GGG - chr4.3:39506200-39506219 None:intergenic 45.0%
!! CAAGTCATTTTGTGCTCCAG+TGG - chr4.3:39506103-39506122 None:intergenic 45.0%
!! CATTTTGAGGGAAAGAGAGG+AGG - chr4.3:39506188-39506207 None:intergenic 45.0%
!! CGTCATTTTGAGGGAAAGAG+AGG - chr4.3:39506191-39506210 None:intergenic 45.0%
!! GGAAAAGAAGGAAGTGCCAA+AGG + chr4.3:39501792-39501811 MS.gene004015:CDS 45.0%
!!! AAACATTTTATATTTTAAAA+AGG - chr4.3:39505165-39505184 None:intergenic 5.0%
!!! TTTATTAATGATTTTTAATT+GGG + chr4.3:39501410-39501429 MS.gene004015:intron 5.0%
AAAACGCCCAGGCCTAAGTA+AGG - chr4.3:39504827-39504846 None:intergenic 50.0%
AAACCATACAGCGGCGATAC+TGG + chr4.3:39506222-39506241 MS.gene004015:CDS 50.0%
AAGCTGCTCTGATTGCTGCA+AGG + chr4.3:39505013-39505032 MS.gene004015:CDS 50.0%
ACAACGCCTTACTTAGGCCT+GGG + chr4.3:39504818-39504837 MS.gene004015:CDS 50.0%
ACCAGATCCCTTTGCAGGAA+GGG - chr4.3:39503834-39503853 None:intergenic 50.0%
ACCGTTGCTTACCATGAAGC+AGG + chr4.3:39505610-39505629 MS.gene004015:CDS 50.0%
AGAACCAACCTGCAACAGCA+TGG - chr4.3:39505636-39505655 None:intergenic 50.0%
AGAGTCTATCCAAGATCCGC+GGG + chr4.3:39502597-39502616 MS.gene004015:intron 50.0%
ATGTCTGCTCCAGCAAATCC+TGG - chr4.3:39504976-39504995 None:intergenic 50.0%
CAAGGAACCCTTCCTGCAAA+GGG + chr4.3:39503824-39503843 MS.gene004015:CDS 50.0%
CAGAGTCTATCCAAGATCCG+CGG + chr4.3:39502596-39502615 MS.gene004015:intron 50.0%
CCTCAAAATGACGACGCGTT+TGG + chr4.3:39506198-39506217 MS.gene004015:CDS 50.0%
CGCTCCAGATGTTTAGTCGT+AGG + chr4.3:39502659-39502678 MS.gene004015:intron 50.0%
CTATCTCACCCCATTGTTGG+TGG + chr4.3:39502274-39502293 MS.gene004015:CDS 50.0%
CTCATTGGAGCAATCTCCAC+TGG + chr4.3:39506084-39506103 MS.gene004015:CDS 50.0%
CTCCAGCAAATCCTGGAGTA+AGG - chr4.3:39504969-39504988 None:intergenic 50.0%
GATCACGAGGACCAAGAGAA+AGG - chr4.3:39502319-39502338 None:intergenic 50.0%
GCCTGCTTCATGGTAAGCAA+CGG - chr4.3:39505614-39505633 None:intergenic 50.0%
GCGTTTGGGAAACCATACAG+CGG + chr4.3:39506213-39506232 MS.gene004015:CDS 50.0%
GTCCTGAGAAGGTTCTCACT+AGG - chr4.3:39505736-39505755 None:intergenic 50.0%
GTGGGTTCTGCACTCTTGAA+GGG - chr4.3:39506411-39506430 None:intergenic 50.0%
GTTCCCAAAATCAACAGGGC+TGG - chr4.3:39504013-39504032 None:intergenic 50.0%
GTTGCACGGTGAAGCAAGAT+TGG + chr4.3:39501446-39501465 MS.gene004015:CDS 50.0%
TAGCACAACAACTCCAGCAG+TGG - chr4.3:39504770-39504789 None:intergenic 50.0%
TAGTCCCACCACCAACAATG+GGG - chr4.3:39502285-39502304 None:intergenic 50.0%
TCCACGACCATTCTTACCAG+TGG - chr4.3:39504089-39504108 None:intergenic 50.0%
TCCACTGGTAAGAATGGTCG+TGG + chr4.3:39504085-39504104 MS.gene004015:CDS 50.0%
TGTGGGTTCTGCACTCTTGA+AGG - chr4.3:39506412-39506431 None:intergenic 50.0%
TTACCAGTATCGCCGCTGTA+TGG - chr4.3:39506228-39506247 None:intergenic 50.0%
! AAGGGTTTTTCCTGTGCCTG+GGG - chr4.3:39504485-39504504 None:intergenic 50.0%
! ATGGGAAGGAAAGTGCAAGG+TGG + chr4.3:39504043-39504062 MS.gene004015:CDS 50.0%
! CAGGACAAAGGAGCAGCTTT+TGG + chr4.3:39505750-39505769 MS.gene004015:CDS 50.0%
! CTTGTATGACCCTTGGTGGT+CGG + chr4.3:39505779-39505798 MS.gene004015:CDS 50.0%
! GGAACAACCTCAGGTTCTAG+AGG - chr4.3:39506525-39506544 None:intergenic 50.0%
! TGCACTCAGGTCACCGTTTT+GGG + chr4.3:39502624-39502643 MS.gene004015:intron 50.0%
! TTGGCTGGCTATTGCAGAGA+CGG - chr4.3:39503220-39503239 None:intergenic 50.0%
! TTGTATGACCCTTGGTGGTC+GGG + chr4.3:39505780-39505799 MS.gene004015:CDS 50.0%
! TTTAGTCGTAGGCGCCGTAA+AGG + chr4.3:39502670-39502689 MS.gene004015:intron 50.0%
!! ATTGGGAAGCATCAAGGAGC+AGG - chr4.3:39506011-39506030 None:intergenic 50.0%
!! CAAGGTGGATTTGGTGTTGG+TGG + chr4.3:39504058-39504077 MS.gene004015:CDS 50.0%
!! CCAAAAGGTGCTCTTCTGGT+GGG + chr4.3:39504457-39504476 MS.gene004015:CDS 50.0%
!! CCAAACGCGTCGTCATTTTG+AGG - chr4.3:39506201-39506220 None:intergenic 50.0%
!! GTCTTCACCTCTAGAACCTG+AGG + chr4.3:39506515-39506534 MS.gene004015:CDS 50.0%
!! GTGCAAGGTGGATTTGGTGT+TGG + chr4.3:39504055-39504074 MS.gene004015:CDS 50.0%
!! TCCAAAAGGTGCTCTTCTGG+TGG + chr4.3:39504456-39504475 MS.gene004015:CDS 50.0%
!! TGCTGTTGCAGGTTGGTTCT+TGG + chr4.3:39505636-39505655 MS.gene004015:CDS 50.0%
!!! GATGGTTTTGGAACCACTGC+TGG + chr4.3:39504754-39504773 MS.gene004015:CDS 50.0%
AAAGCAACTGCAGGGGAGTC+TGG + chr4.3:39504511-39504530 MS.gene004015:CDS 55.0%
AACCACCGTCGATGAAGCCA+AGG + chr4.3:39506482-39506501 MS.gene004015:CDS 55.0%
ACCCTCCTTGGCTTCATCGA+CGG - chr4.3:39506490-39506509 None:intergenic 55.0%
ACCCTTCCTGCAAAGGGATC+TGG + chr4.3:39503830-39503849 MS.gene004015:CDS 55.0%
ACCGTCGATGAAGCCAAGGA+GGG + chr4.3:39506486-39506505 MS.gene004015:CDS 55.0%
ATGAAGCCAAGGAGGGTGGT+GGG + chr4.3:39506493-39506512 MS.gene004015:CDS 55.0%
ATTGGTCGGAAAAGGGGTCG+TGG + chr4.3:39504670-39504689 MS.gene004015:CDS 55.0%
CAAAACGGTGACCTGAGTGC+AGG - chr4.3:39502625-39502644 None:intergenic 55.0%
CAACAGCATGGCCTGCTTCA+TGG - chr4.3:39505624-39505643 None:intergenic 55.0%
CAAGCAGACAGCGAAGTCCA+AGG + chr4.3:39503806-39503825 MS.gene004015:CDS 55.0%
CACCAGATCCCTTTGCAGGA+AGG - chr4.3:39503835-39503854 None:intergenic 55.0%
CCAAGGAACCCTTCCTGCAA+AGG + chr4.3:39503823-39503842 MS.gene004015:CDS 55.0%
CCTTTGCAGGAAGGGTTCCT+TGG - chr4.3:39503826-39503845 None:intergenic 55.0%
CTTACCTGCTGCTGATCACG+AGG - chr4.3:39502332-39502351 None:intergenic 55.0%
CTTCCTGCAAAGGGATCTGG+TGG + chr4.3:39503833-39503852 MS.gene004015:CDS 55.0%
GACAACGCCTTACTTAGGCC+TGG + chr4.3:39504817-39504836 MS.gene004015:CDS 55.0%
GCCCTTACTCCAGGATTTGC+TGG + chr4.3:39504964-39504983 MS.gene004015:CDS 55.0%
GCTGCTCCTTTGTCCTGAGA+AGG - chr4.3:39505747-39505766 None:intergenic 55.0%
GCTGGAGTTGTTGTGCTAGC+AGG + chr4.3:39504772-39504791 MS.gene004015:CDS 55.0%
GGCGCCTACGACTAAACATC+TGG - chr4.3:39502666-39502685 None:intergenic 55.0%
GGTGGCTCCACTGGTAAGAA+TGG + chr4.3:39504079-39504098 MS.gene004015:CDS 55.0%
! AGATGTTGCTGGCTGTGACG+AGG + chr4.3:39504360-39504379 MS.gene004015:CDS 55.0%
! AGGGTTTTTCCTGTGCCTGG+GGG - chr4.3:39504484-39504503 None:intergenic 55.0%
! CTGCACTCAGGTCACCGTTT+TGG + chr4.3:39502623-39502642 MS.gene004015:intron 55.0%
! TCTCACCCCATTGTTGGTGG+TGG + chr4.3:39502277-39502296 MS.gene004015:CDS 55.0%
! TGGCTGGCTATTGCAGAGAC+GGG - chr4.3:39503219-39503238 None:intergenic 55.0%
!! CTCACCCCATTGTTGGTGGT+GGG + chr4.3:39502278-39502297 MS.gene004015:CDS 55.0%
!! GAAGGAAGTGCCAAAGGGAG+AGG + chr4.3:39501798-39501817 MS.gene004015:CDS 55.0%
!! GAGGAAGCGCAAGAAGCACT+AGG + chr4.3:39503911-39503930 MS.gene004015:CDS 55.0%
!! GGTGGATTTGGTGTTGGTGG+TGG + chr4.3:39504061-39504080 MS.gene004015:CDS 55.0%
!! TGTCGGTGTTGGACCATCCA+GGG + chr4.3:39504579-39504598 MS.gene004015:CDS 55.0%
!! TTGTCGGTGTTGGACCATCC+AGG + chr4.3:39504578-39504597 MS.gene004015:CDS 55.0%
!!! CCCACCAGAAGAGCACCTTT+TGG - chr4.3:39504460-39504479 None:intergenic 55.0%
!!! GCGCCAGCCCTGTTGATTTT+GGG + chr4.3:39504007-39504026 MS.gene004015:CDS 55.0%
!!! TGCGCCAGCCCTGTTGATTT+TGG + chr4.3:39504006-39504025 MS.gene004015:CDS 55.0%
AGGCTTGCAGCCCTTACTCC+AGG + chr4.3:39504955-39504974 MS.gene004015:CDS 60.0%
AGGGGTCGTGGAGGTTTCTC+TGG + chr4.3:39504682-39504701 MS.gene004015:CDS 60.0%
ATCGTGCGGTCAAAACGCCC+AGG - chr4.3:39504838-39504857 None:intergenic 60.0%
CACCGTCGATGAAGCCAAGG+AGG + chr4.3:39506485-39506504 MS.gene004015:CDS 60.0%
CAGGCCATGCTGTTGCAGGT+TGG + chr4.3:39505629-39505648 MS.gene004015:CDS 60.0%
CTCCTTGGCTTCATCGACGG+TGG - chr4.3:39506487-39506506 None:intergenic 60.0%
GAAGCAGGCCATGCTGTTGC+AGG + chr4.3:39505625-39505644 MS.gene004015:CDS 60.0%
GATGAAGCCAAGGAGGGTGG+TGG + chr4.3:39506492-39506511 MS.gene004015:CDS 60.0%
GTCGATGAAGCCAAGGAGGG+TGG + chr4.3:39506489-39506508 MS.gene004015:CDS 60.0%
GTGACCCGAGTGGCCCAAAA+CGG - chr4.3:39502640-39502659 None:intergenic 60.0%
TGAAGACCCACCACCCTCCT+TGG - chr4.3:39506502-39506521 None:intergenic 60.0%
TGGCCACCAGATCCCTTTGC+AGG - chr4.3:39503839-39503858 None:intergenic 60.0%
TGGTCCTCGTGATCAGCAGC+AGG + chr4.3:39502325-39502344 MS.gene004015:CDS 60.0%
!! GGTCACCGTTTTGGGCCACT+CGG + chr4.3:39502632-39502651 MS.gene004015:intron 60.0%
!! GTCACCGTTTTGGGCCACTC+GGG + chr4.3:39502633-39502652 MS.gene004015:intron 60.0%
CTCGCGGCACAGCAGCACTT+GGG + chr4.3:39505695-39505714 MS.gene004015:CDS 65.0%
GGTCGGAAAAGGGGTCGTGG+AGG + chr4.3:39504673-39504692 MS.gene004015:CDS 65.0%
! CATCTGGAGCGTGACCCGAG+TGG - chr4.3:39502650-39502669 None:intergenic 65.0%
!! GGTGTTGGTGGTGGCTCCAC+TGG + chr4.3:39504070-39504089 MS.gene004015:CDS 65.0%
ATCCGCGGGCACCTGCACTC+AGG + chr4.3:39502611-39502630 MS.gene004015:intron 70.0%
CCTCGCGGCACAGCAGCACT+TGG + chr4.3:39505694-39505713 MS.gene004015:CDS 70.0%
CTCGGCAGCCCGACCACCAA+GGG - chr4.3:39505791-39505810 None:intergenic 70.0%
GACCTGAGTGCAGGTGCCCG+CGG - chr4.3:39502616-39502635 None:intergenic 70.0%
GTGCAGGTGCCCGCGGATCT+TGG - chr4.3:39502609-39502628 None:intergenic 70.0%
! CCAAGTGCTGCTGTGCCGCG+AGG - chr4.3:39505697-39505716 None:intergenic 70.0%
! GCTCTTCTGGTGGGTCCCCC+AGG + chr4.3:39504466-39504485 MS.gene004015:CDS 70.0%
GCTCGGCAGCCCGACCACCA+AGG - chr4.3:39505792-39505811 None:intergenic 75.0%
TGGTGGTCGGGCTGCCGAGC+AGG + chr4.3:39505792-39505811 MS.gene004015:CDS 75.0%
! CTGGTGGGTCCCCCAGGCAC+AGG + chr4.3:39504472-39504491 MS.gene004015:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 39501307 39506551 39501307 ID=MS.gene004015
chr4.3 mRNA 39501307 39506551 39501307 ID=MS.gene004015.t1;Parent=MS.gene004015
chr4.3 exon 39501307 39501357 39501307 ID=MS.gene004015.t1.exon1;Parent=MS.gene004015.t1
chr4.3 CDS 39501307 39501357 39501307 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39501441 39501663 39501441 ID=MS.gene004015.t1.exon2;Parent=MS.gene004015.t1
chr4.3 CDS 39501441 39501663 39501441 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39501770 39501841 39501770 ID=MS.gene004015.t1.exon3;Parent=MS.gene004015.t1
chr4.3 CDS 39501770 39501841 39501770 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39502207 39502346 39502207 ID=MS.gene004015.t1.exon4;Parent=MS.gene004015.t1
chr4.3 CDS 39502207 39502346 39502207 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39503695 39504165 39503695 ID=MS.gene004015.t1.exon5;Parent=MS.gene004015.t1
chr4.3 CDS 39503695 39504165 39503695 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39504349 39505116 39504349 ID=MS.gene004015.t1.exon6;Parent=MS.gene004015.t1
chr4.3 CDS 39504349 39505116 39504349 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39505586 39505813 39505586 ID=MS.gene004015.t1.exon7;Parent=MS.gene004015.t1
chr4.3 CDS 39505586 39505813 39505586 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
chr4.3 exon 39506081 39506551 39506081 ID=MS.gene004015.t1.exon8;Parent=MS.gene004015.t1
chr4.3 CDS 39506081 39506551 39506081 ID=cds.MS.gene004015.t1;Parent=MS.gene004015.t1
Gene Sequence

>MS.gene004015

ATGATTTTTTCAAGAATTGGGCGTTCTCTATCGCGTTCTTCTCGCGTTAAAGTAAGCTTTTTTTCCCATCAATTTGATTCGTTAATTCACGAAAGATTATAACTTTATTAATGATTTTTAATTGGGTCATGTAGAATTTGTTGCACGGTGAAGCAAGATTGGGAACGCTTTATGGAGTTTCGAGAACGAATGTTTTTATCGATGATGTTGAAAATGGATTAGGGTTTTTAAGGGGTTATGTATCTTCTGCCATAGCTCGTAATAATGGGTTTGCTTCAAATTTGTATGATTTTAAATCAATTGCTGCAAACCCTAGGCTTCATCGCATGTTTTCGAGCGAATCCCCAAAGAAAAAGAGTAAGTTAGGGTTTCATTGTTGTTGTTATGTCTTAATTTTGATGAAATTGGGAAAATGGGTTTTTGTTATTTTAGCTATTAAGCTCATATTTCTTGTTTTTGACAGATTATGAAAAGTTTTATCCCAAGGAAAAGAAGGAAGTGCCAAAGGGAGAGGAGAAAAAATCTGAGTCTAAAGGTAATGAAATGAAATGAAATGAAATGTGTCATTGTATCTTGTGTTATTGTTAGTTGTGGTCATAGCTGATGTGATGAGAAGTGTGTTACTCATGATGAAGATTTTCTATGATTTTATATGTGAATTACTCTCAATTAGTGTTGGGTTCACACTTAAATTACAACTTCACTGTAGACTAGATTCTGAAGAACATCTTAGAATCCCAACAACATGTTTTCTCTCAATCATATGATTTTGGTCTGTACTGGTTTAATTTTGAGGTATTTATATGTGTGGGGGAATTAATCATGCATCTGCATTCCAGTTTGTCTTGCGATAAATGGGGTACCAGCAGCAATTTTTAACACTTCTTGCTTTGATTTCAGATGAGTCAAAGTCAAACACAGAGGATGGAGGAAGTTTTCACGAAGCTTTTATCAAACAGTTTCAAAACTATCTCACCCCATTGTTGGTGGTGGGACTATTTCTTTCATCCCTTTCTCTTGGTCCTCGTGATCAGCAGCAGGTAAGCATAACTTCAAATATATTGCAAGGTCCGGTTGTTATTTTAATTTTCTTATGTGGGGGGAGGGGAGTACGTTTGAGTTGAGAACATGAGATCTATAAATATCCGTGTTCGGCATTGTTTGAGTTAAGAGTCCTACACTGGATTAGATAAGGCCTTAAACATAAGTTTACAAGTCAGGGCAATTTTCACCTCACTAGACAGTTTTGTAAGGTTGAGTTAAGCCCAACCCAAATTCTAAGATAGTATCAGAGTCTATCCAAGATCCGCGGGCACCTGCACTCAGGTCACCGTTTTGGGCCACTCGGGTCACGCTCCAGATGTTTAGTCGTAGGCGCCGTAAAGGTGTGAGTGTGTTAAGGGGCCCCACATTGAATGAGATGAAGTTTGAACATAAGTTTATAAGTGAGGGAAGTTATCAACTTACTGACCAGTTTTGTAAGGATGAGTTAAACCCAACCCATATTCTAAGGCTAGATGTTACTGCTTGACTACAATTTTCCGATTGAAAATTGAACATCGATGAGATGAGCTTTATGCTTCTGTGATTGACAGCTTTTATTGAAGATCCATTACACAAGAATACTATTAGAATATATTTGAGATTTTTATTTTCCATGTTTTTGCTTGCTTGGTATATACATTTCACCTATAAAGCTCGAATATGTAATACGGTCTAGATACAAACAAAATTGTTATAAAAAAAAAATTATTTACATGTAGAAATTAGAATACTATATTGATAAAAATTTACAATAAAAATTGTGATGTTAACAAATAGTGTAGAGTTTTTTGTCTAAATCATGATAGATTTTAATCCCTATGTTAAGATATCAACAAAAGCATCATTAAAAGAACTTAGAACAAGTCCCGTCTCTGCAATAGCCAGCCAACAATTCACAACCATTTTGAATAAATTAGCTTATTCATTCAGTCTATTCTCCTCACATTACCATCACCCATAAAAAAACATGATTTTCAAGTCTGGTTCATTAAGAGACAACTATACCAATTCAAGAAGTCCAACATTATCTTGAACTGTTTTATGTACTTCTCCACTGATGTCCTACAACTGTCTCACATTTTAATACCCTTCATCTTTCCTAAGATATGTATCTGCATATTTGGGATTTTTATTTTATTTTTTATAAAAAAATATAACAATTTTGATACGTCTAGGTTACGTATCCATGTGTAACCTCGAAGTATTGGTATCCGATATGCGAGCCTTTGAATTGAACCACACGTCTCTTAGCAATGAGATGACTCTACATCTTTGTCTGGCTTTTTATAGTTTATTTAATTATTATCATATTGCTAATGTGGGTCATAATTTGATTCTCTGCAGATTAGTTTCCAGGAGTTTAAAAATAAGCTTTTGGAACCAGGATTAGTAGACCATATTGTTGTCTCCAACAAATCAGTTGCCAAAATATATGTGAGGAACTCTCCCCTTAATCAAGCAGACAGCGAAGTCCAAGGAACCCTTCCTGCAAAGGGATCTGGTGGCCAATTTAAATATGTAATCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCGCAAGAAGCACTAGGCGTTGACTCTCACAATTTTGTACCTGTTATATATTCTTCTGAAATGGTTTGGTACCAGGAGTTAATGAGATTTGCGCCAGCCCTGTTGATTTTGGGAACTCTCTGGTTTATGGGAAGGAAAGTGCAAGGTGGATTTGGTGTTGGTGGTGGCTCCACTGGTAAGAATGGTCGTGGAATATTTAACATTGGAAAAGCACATGTTACTAAAGTAGACAAAAATACCAAAAACAAGGTTGGTGATTTATTCTTCATGAATTGGCTAATATTTTTTTATTTGTTTTTTTATCAACATTTTCCCTAGTTGATCATTGCCTTTCCCATGTCCACTTTTTCTTTAGGGAGTTGTGGTGCTGAATAGCTTCAGTGTTAAGTTCATTTAAGAGAATATGTTTCTTATTTGAATTCATTTGTTCAGGTTTATTTTAAAGATGTTGCTGGCTGTGACGAGGCAAAGCAAGAAATTATGGAGTTTGTGCACTTCCTCAAGAATCCTAAGAAATACGAAGAGCTTGGTGCCAAAATTCCAAAAGGTGCTCTTCTGGTGGGTCCCCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGGGAGTCTGGTGTGCCATTTCTTTCCATATCTGGTTCTGATTTCATGGAAATGTTTGTCGGTGTTGGACCATCCAGGGTGAGAAACTTGTTTCTGGAAGCAAGGCAGTGTGCTCCCAGTATAGTATTTATTGATGAGATTGATGCAATTGGTCGGAAAAGGGGTCGTGGAGGTTTCTCTGGTTCAAATGATGAGCGTGAAAGTACTTTAAATCAATTGTTGGTGGAAATGGATGGTTTTGGAACCACTGCTGGAGTTGTTGTGCTAGCAGGTACAAATAGAGCTGATATATTAGACAACGCCTTACTTAGGCCTGGGCGTTTTGACCGCACGATATCAATTGATGTACCTGACATTAAAGGTCGTGACCAGATATTTCAGATTTATTTGAAAAAAATCAAACTTGACCACGAGCCTTCATATTATTCTCAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGACTGATGAATCACAAGTCACAATGGATCATTTTGAGGCAGCTATCGATAGGATCATTGGTGGTTTGGAGAAGAAGAACAGGGTAGGCCTTTAAAAGCCTGTTTGTTTTTTATTTTTAAAAAAAATACCTTTTTAAAATATAAAATGTTTTCTGGCTTTGGCTTGTTAAGCTGTTTAAAACAGTCGGATATTGAAAAATATAAACAAATTACTTATTCTTTGATAAGCTATTTTGACTGAAAAATATAGTGATATTATCAACTTTTTAATAAAAAAGTGCTCTTTATATTTGTTATTTAAAGAAATATTGCTTCTGTTTCACTTTAAAATCTCCACAGAATTATTTTTTTGTAATTTACACATTCTAATAATCTTTTCAAAATTTTCTGTATCTCAATGCAGAAATAGTTTATCTTATGTTTTTTGTAATTTAAGACATCATGATGAGGAAAATTATATGCTACAATTATCTGAAGATTATATGGATTGGTCACATTCCTTTTTTCAACTACTGATAATAGTCTCTAAAAATACTCATGTTTCTTGCCTAGGTAATAAGTAAGCTGGAAAGGCGTACCGTTGCTTACCATGAAGCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTGTGAGCCATTGTTGAAAGTAACTATTGTTCCTCGCGGCACAGCAGCACTTGGGTTTGCCCAATATGTTCCTAGTGAGAACCTTCTCAGGACAAAGGAGCAGCTTTTGGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCCGAGCAGGTTGTTTCATCATTTCCAATTTTGTTTACTCACCTCTTTTCTTTTATTCATTGCTTTAAACGATCTTTCTATTGAAATAATTCATTATATCTTGGTCCATTACTTATTTTGTTTCACATTTGCAAATCTCATTATTGCATAGTGTTATATCTTTGATATACAGTTCCACAAAAAAACACTGATATACACTCATGCCTGCTCCTTGATGCTTCCCAATATTGTAAGTCATGAGATGAGTATGATGGTTTCTGTCCCTTTTTACGGCAGGTTCTCATTGGAGCAATCTCCACTGGAGCACAAAATGACTTGGAGAAAGTGACCAAGATGACATATGCCCAAATAGCCATCTATGGTTTCAGTGAAAAAGTGGGCCTCCTCTCTTTCCCTCAAAATGACGACGCGTTTGGGAAACCATACAGCGGCGATACTGGTAACATCATTGATCAGGAAGTGCGAGATTGGGTGAAACATGCATATGAACGTACCATACAGCTTATAGAAGAACACAAGGAGAAAATAGCTCAAATTGCAGAGTTACTTCTCGAAAAAGAAGTACTTCACCAAGATGACTTGGTTCGAATCTTGGGTGAACGACCCTTCAAGAGTGCAGAACCCACAAATTACGATAGATTTAAGCTAGGGTTTCAAGATGAGGAGAAAGCTGCAGAAACCACCGTCGATGAAGCCAAGGAGGGTGGTGGGTCTTCACCTCTAGAACCTGAGGTTGTTCCCACATAG
Protein sequence

>MS.gene004015.t1

MIFSRIGRSLSRSSRVKNLLHGEARLGTLYGVSRTNVFIDDVENGLGFLRGYVSSAIARNNGFASNLYDFKSIAANPRLHRMFSSESPKKKNYEKFYPKEKKEVPKGEEKKSESKDESKSNTEDGGSFHEAFIKQFQNYLTPLLVVGLFLSSLSLGPRDQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNSPLNQADSEVQGTLPAKGSGGQFKYVINIGSVESFEEKLEEAQEALGVDSHNFVPVIYSSEMVWYQELMRFAPALLILGTLWFMGRKVQGGFGVGGGSTGKNGRGIFNIGKAHVTKVDKNTKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFLEARQCAPSIVFIDEIDAIGRKRGRGGFSGSNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRADILDNALLRPGRFDRTISIDVPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARTDESQVTMDHFEAAIDRIIGGLEKKNRVISKLERRTVAYHEAGHAVAGWFLEHCEPLLKVTIVPRGTAALGFAQYVPSENLLRTKEQLLDMTCMTLGGRAAEQVLIGAISTGAQNDLEKVTKMTYAQIAIYGFSEKVGLLSFPQNDDAFGKPYSGDTGNIIDQEVRDWVKHAYERTIQLIEEHKEKIAQIAELLLEKEVLHQDDLVRILGERPFKSAEPTNYDRFKLGFQDEEKAAETTVDEAKEGGGSSPLEPEVVPT