Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00502.t1 | XP_003589067.2 | 96.8 | 717 | 23 | 0 | 1 | 717 | 1 | 717 | 0.00E+00 | 1355.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00502.t1 | Q9CB03 | 56.7 | 720 | 281 | 5 | 1 | 716 | 1 | 693 | 1.6e-225 | 783.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00502.t1 | G7ICB7 | 96.8 | 717 | 23 | 0 | 1 | 717 | 1 | 717 | 0.0e+00 | 1355.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23533 | MS.gene00502 | PPI |
| MS.gene038070 | MS.gene00502 | PPI |
| MS.gene00502 | MS.gene036045 | PPI |
| MS.gene96965 | MS.gene00502 | PPI |
| MS.gene020394 | MS.gene00502 | PPI |
| MS.gene89567 | MS.gene00502 | PPI |
| MS.gene00502 | MS.gene018670 | PPI |
| MS.gene23978 | MS.gene00502 | PPI |
| MS.gene00502 | MS.gene23457 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00502.t1 | MTR_1g018040 | 96.792 | 717 | 23 | 0 | 1 | 717 | 1 | 717 | 0.0 | 1433 |
| MS.gene00502.t1 | MTR_1g069630 | 44.028 | 720 | 381 | 12 | 6 | 716 | 6 | 712 | 0.0 | 542 |
| MS.gene00502.t1 | MTR_7g097230 | 43.232 | 724 | 391 | 9 | 1 | 716 | 16 | 727 | 3.32e-179 | 529 |
| MS.gene00502.t1 | MTR_1g075480 | 42.600 | 723 | 391 | 10 | 3 | 716 | 24 | 731 | 3.51e-173 | 514 |
| MS.gene00502.t1 | MTR_1g075480 | 42.600 | 723 | 391 | 10 | 3 | 716 | 37 | 744 | 6.28e-173 | 513 |
| MS.gene00502.t1 | MTR_1g075480 | 42.424 | 726 | 391 | 11 | 3 | 716 | 37 | 747 | 5.49e-171 | 509 |
| MS.gene00502.t1 | MTR_8g071330 | 39.485 | 699 | 406 | 6 | 20 | 716 | 2 | 685 | 5.51e-166 | 494 |
| MS.gene00502.t1 | MTR_5g026810 | 40.616 | 714 | 396 | 9 | 6 | 716 | 4 | 692 | 1.31e-163 | 488 |
| MS.gene00502.t1 | MTR_1g075480 | 42.258 | 620 | 337 | 8 | 3 | 616 | 24 | 628 | 5.19e-145 | 438 |
| MS.gene00502.t1 | MTR_7g097230 | 44.262 | 549 | 293 | 7 | 1 | 541 | 16 | 559 | 1.52e-130 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00502.t1 | AT1G27460 | 56.806 | 720 | 280 | 5 | 1 | 716 | 1 | 693 | 0.0 | 821 |
| MS.gene00502.t1 | AT1G27460 | 56.667 | 720 | 277 | 5 | 1 | 716 | 1 | 689 | 0.0 | 820 |
| MS.gene00502.t1 | AT1G27460 | 58.909 | 550 | 210 | 3 | 1 | 546 | 1 | 538 | 0.0 | 657 |
| MS.gene00502.t1 | AT2G43040 | 41.761 | 704 | 378 | 9 | 24 | 716 | 18 | 700 | 1.91e-165 | 493 |
| MS.gene00502.t1 | AT2G43040 | 41.761 | 704 | 378 | 9 | 24 | 716 | 18 | 700 | 1.91e-165 | 493 |
| MS.gene00502.t1 | AT4G28600 | 40.055 | 729 | 409 | 13 | 1 | 716 | 25 | 738 | 8.06e-154 | 464 |
| MS.gene00502.t1 | AT4G28600 | 40.055 | 729 | 409 | 13 | 1 | 716 | 25 | 738 | 8.06e-154 | 464 |
| MS.gene00502.t1 | AT4G28600 | 39.754 | 732 | 412 | 14 | 1 | 716 | 25 | 743 | 4.20e-153 | 462 |
Find 142 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAGCATGATTTGGATAT+TGG | 0.161996 | 1.2:-5097846 | None:intergenic |
| GGCATTAACGGAACGGAAAT+TGG | 0.210728 | 1.2:+5098671 | MS.gene00502:intron |
| GGAATTAACATCTGTATAAA+TGG | 0.272660 | 1.2:-5098721 | None:intergenic |
| CTTCAGCTCCTCTAAGGATT+TGG | 0.281062 | 1.2:-5096253 | None:intergenic |
| ACCTGTAATATGCCAACTTC+TGG | 0.294083 | 1.2:-5098799 | None:intergenic |
| GCTTAAAGCCAAATCCTTAG+AGG | 0.300513 | 1.2:+5096245 | MS.gene00502:CDS |
| ATCTGCACAGCAGAGGTTTA+AGG | 0.303216 | 1.2:+5098203 | MS.gene00502:CDS |
| CCCAGAAGTTGGCATATTAC+AGG | 0.318735 | 1.2:+5098798 | MS.gene00502:CDS |
| AGCTGCCCTACACGTGCTTC+AGG | 0.320041 | 1.2:+5096077 | MS.gene00502:CDS |
| TCTGGTCAAACCATGGAATT+TGG | 0.324195 | 1.2:+5097384 | MS.gene00502:CDS |
| CTAAATGAAGCTGCTCTAAC+TGG | 0.324696 | 1.2:+5098033 | MS.gene00502:CDS |
| AGCAGTAATAAATGCCAAAA+AGG | 0.325256 | 1.2:+5098362 | MS.gene00502:CDS |
| AAGATGTTGTGTGCTTGTTC+TGG | 0.326511 | 1.2:+5095449 | None:intergenic |
| AAATTCTTGGTGTTTGTTAC+GGG | 0.330909 | 1.2:+5097944 | MS.gene00502:CDS |
| TGGAGCTGCTTCCAAATCTA+TGG | 0.333720 | 1.2:+5097314 | MS.gene00502:CDS |
| GATTGGGATGCTGAAATAAT+TGG | 0.335302 | 1.2:+5097586 | MS.gene00502:CDS |
| TCTTTGAAATTGAACTCTTT+CGG | 0.336725 | 1.2:-5097995 | None:intergenic |
| ATCAGGAAAGATGGAACTTC+AGG | 0.337312 | 1.2:+5097558 | MS.gene00502:CDS |
| GTTCAAGGCCAACAAATTCT+TGG | 0.338655 | 1.2:+5097931 | MS.gene00502:CDS |
| ATGCCTTCATGAGCATGATT+TGG | 0.338766 | 1.2:-5097853 | None:intergenic |
| CTGCTAGTGGGTTATCTTCA+AGG | 0.339248 | 1.2:+5095534 | MS.gene00502:CDS |
| GAATGCATTGACATCAAATT+AGG | 0.345332 | 1.2:-5096195 | None:intergenic |
| ATGAGCATGATTTGGATATT+GGG | 0.348898 | 1.2:-5097845 | None:intergenic |
| CCTGCCTTGATCCATAGATT+TGG | 0.349443 | 1.2:-5097325 | None:intergenic |
| CAAGGTTGAACCAAGCTTCA+TGG | 0.349582 | 1.2:-5099146 | None:intergenic |
| GTATTGCTTCAGCTCCTCTA+AGG | 0.354042 | 1.2:-5096259 | None:intergenic |
| CAAATTCTTGGTGTTTGTTA+CGG | 0.366837 | 1.2:+5097943 | MS.gene00502:CDS |
| TTGATACTTGGAATATAATC+AGG | 0.370501 | 1.2:-5099030 | None:intergenic |
| CAGATCCTACCAGGTATCTT+TGG | 0.380041 | 1.2:+5097670 | MS.gene00502:CDS |
| TAGGTCTCAATAGCTTGCTT+TGG | 0.380503 | 1.2:-5098327 | None:intergenic |
| ATTGAATCAGCTCTTCCTAA+TGG | 0.382528 | 1.2:+5097235 | MS.gene00502:CDS |
| ATGAAGCTGTCACTGCTTAT+CGG | 0.382570 | 1.2:+5097356 | MS.gene00502:CDS |
| AATCACTCAAACTGTTGAAC+TGG | 0.382989 | 1.2:-5099249 | None:intergenic |
| GACTGGGATGTTTGAATCAT+TGG | 0.390614 | 1.2:+5097633 | MS.gene00502:CDS |
| TATCTTCAAGGACTGGAGAT+TGG | 0.392223 | 1.2:+5095546 | MS.gene00502:CDS |
| TGGTGAAGAATGTAAGTTGC+AGG | 0.392513 | 1.2:+5097273 | MS.gene00502:CDS |
| ATCTTCAAGGACTGGAGATT+GGG | 0.397296 | 1.2:+5095547 | MS.gene00502:CDS |
| TACCACAAGCTTTCCTCAAA+AGG | 0.405664 | 1.2:-5097762 | None:intergenic |
| TAAGGAAGCTAGAGCATTGT+TGG | 0.406121 | 1.2:+5096023 | MS.gene00502:intron |
| TCCCTTGTTGCTAGGGAATC+CGG | 0.406701 | 1.2:-5095506 | None:intergenic |
| CTTTGACCCCAAGGATGATC+AGG | 0.411725 | 1.2:+5096115 | MS.gene00502:CDS |
| ATGTTACTCATTGATGTTGT+TGG | 0.414395 | 1.2:-5097505 | None:intergenic |
| ATTAATTCTATCAGGAAAGA+TGG | 0.416682 | 1.2:+5097549 | MS.gene00502:CDS |
| CAATAGCCCTGATCATCCTT+GGG | 0.421432 | 1.2:-5096122 | None:intergenic |
| TTAGCTACCACACTGCTCTA+TGG | 0.426482 | 1.2:+5097439 | MS.gene00502:CDS |
| AACAAACACCAAGAATTTGT+TGG | 0.430010 | 1.2:-5097939 | None:intergenic |
| ATACCGTCCGGCATTCCATT+AGG | 0.430679 | 1.2:-5097250 | None:intergenic |
| AAGGAAGCTAGAGCATTGTT+GGG | 0.432906 | 1.2:+5096024 | MS.gene00502:intron |
| TTCGCAGTTGAATTGATACT+TGG | 0.437568 | 1.2:-5099042 | None:intergenic |
| TAATTTGATGTCAATGCATT+CGG | 0.439900 | 1.2:+5096197 | MS.gene00502:CDS |
| AATGGAATGCCGGACGGTAT+TGG | 0.439989 | 1.2:+5097253 | MS.gene00502:CDS |
| TTTAATGAATGCTTTGCGAT+TGG | 0.441748 | 1.2:+5099113 | MS.gene00502:CDS |
| CTCCTTGGCTCCAAATTCCA+TGG | 0.442330 | 1.2:-5097394 | None:intergenic |
| TGTAGACAGGCCAACCTCCT+TGG | 0.444748 | 1.2:-5097409 | None:intergenic |
| GAAGCAGCTCCAATGCTTTG+TGG | 0.446303 | 1.2:-5097303 | None:intergenic |
| CACTGCTTATCGGCGTGCTC+TGG | 0.446793 | 1.2:+5097366 | MS.gene00502:CDS |
| CCTTCTCATTTGCAAGTGAA+TGG | 0.448121 | 1.2:+5097481 | MS.gene00502:CDS |
| TGGAACTTCAGGAAATAGAT+TGG | 0.449360 | 1.2:+5097569 | MS.gene00502:CDS |
| AATGGAAGCATGGCAAGATA+TGG | 0.451345 | 1.2:+5098695 | MS.gene00502:CDS |
| CCTGTAATATGCCAACTTCT+GGG | 0.451772 | 1.2:-5098798 | None:intergenic |
| GCAATAGCCCTGATCATCCT+TGG | 0.456274 | 1.2:-5096123 | None:intergenic |
| GCTCTTTGTTACAGTGCAGC+AGG | 0.459269 | 1.2:+5097718 | MS.gene00502:CDS |
| CATGAAGCTTGGTTCAACCT+TGG | 0.464895 | 1.2:+5099147 | MS.gene00502:CDS |
| GCAAAATTGCCTCAAGAAGC+AGG | 0.465479 | 1.2:-5096224 | None:intergenic |
| AACGGAACGGAAATTGGAAA+TGG | 0.469615 | 1.2:+5098677 | MS.gene00502:CDS |
| GCGAAGTTGTTGATTAAACT+TGG | 0.469791 | 1.2:+5099060 | MS.gene00502:CDS |
| GTATCTTTGGTCGAGCTGAT+AGG | 0.477271 | 1.2:+5097683 | MS.gene00502:CDS |
| TTTGCACCAAACAAATATGA+AGG | 0.477963 | 1.2:-5097814 | None:intergenic |
| AGAGAAATCCCTTGTTGCTA+GGG | 0.478676 | 1.2:-5095513 | None:intergenic |
| CAGAGAAATCCCTTGTTGCT+AGG | 0.478806 | 1.2:-5095514 | None:intergenic |
| AGGTAGCACAGTACCCGCTT+TGG | 0.485220 | 1.2:-5096175 | None:intergenic |
| AACCAAGCTTCATGGTTTGT+CGG | 0.489345 | 1.2:-5099138 | None:intergenic |
| GGAACTTCAGGAAATAGATT+GGG | 0.515192 | 1.2:+5097570 | MS.gene00502:CDS |
| AGCTTGGTTCAACCTTGGAT+TGG | 0.519014 | 1.2:+5099152 | MS.gene00502:CDS |
| GAGGTTGGCCTGTCTACAAA+AGG | 0.519839 | 1.2:+5097414 | MS.gene00502:CDS |
| TTCGGTGAGCCTGCTTCTTG+AGG | 0.520356 | 1.2:+5096215 | MS.gene00502:CDS |
| AGCTCTTCCTAATGGAATGC+CGG | 0.522614 | 1.2:+5097243 | MS.gene00502:CDS |
| AACAAATATGAAGGAAAATG+AGG | 0.527041 | 1.2:-5097805 | None:intergenic |
| CGAAGAGGCACCACAGTCAC+CGG | 0.527986 | 1.2:+5095487 | MS.gene00502:CDS |
| GCTGCCCTACACGTGCTTCA+GGG | 0.528614 | 1.2:+5096078 | MS.gene00502:CDS |
| GAGTTTGCTTTAGATGACAC+TGG | 0.530754 | 1.2:+5098243 | MS.gene00502:CDS |
| AGCTGCCTCGTTAAACTATG+AGG | 0.533344 | 1.2:+5095622 | MS.gene00502:CDS |
| CAGCTTATCAAAACATAATG+AGG | 0.533854 | 1.2:+5098121 | MS.gene00502:CDS |
| TTATCTATCAGAGGCTGCAA+AGG | 0.535927 | 1.2:+5097189 | MS.gene00502:intron |
| AACCGACAAACCATGAAGCT+TGG | 0.536001 | 1.2:+5099136 | MS.gene00502:CDS |
| GAATTTGGAGCCAAGGAGGT+TGG | 0.536228 | 1.2:+5097399 | MS.gene00502:CDS |
| AATACCCTGAAGCACGTGTA+GGG | 0.536742 | 1.2:-5096082 | None:intergenic |
| ACAAGGGATTTCTCTGCTAG+TGG | 0.537197 | 1.2:+5095521 | MS.gene00502:CDS |
| AACCATGGAATTTGGAGCCA+AGG | 0.539099 | 1.2:+5097392 | MS.gene00502:CDS |
| AGGAAACCTCGGTCCAAAGC+GGG | 0.539136 | 1.2:+5096162 | MS.gene00502:CDS |
| GCTTCCAAATCTATGGATCA+AGG | 0.541459 | 1.2:+5097321 | MS.gene00502:CDS |
| GGAAATGTTCCACAAAGCAT+TGG | 0.544581 | 1.2:+5097294 | MS.gene00502:CDS |
| CACCGGATTCCCTAGCAACA+AGG | 0.550084 | 1.2:+5095504 | MS.gene00502:CDS |
| TGAAGCTCAATCATTATACA+AGG | 0.550824 | 1.2:+5098969 | MS.gene00502:CDS |
| TACTGCTAACAAGGTTCTGT+AGG | 0.552206 | 1.2:-5098346 | None:intergenic |
| TATCCAAATCATGCTCATGA+AGG | 0.553335 | 1.2:+5097850 | MS.gene00502:CDS |
| CCAAATCTATGGATCAAGGC+AGG | 0.554355 | 1.2:+5097325 | MS.gene00502:CDS |
| GGCATTTATTACTGCTAACA+AGG | 0.557549 | 1.2:-5098355 | None:intergenic |
| AGTGGGTTATCTTCAAGGAC+TGG | 0.563107 | 1.2:+5095539 | MS.gene00502:CDS |
| TCACTTGCAAATGAGAAGGT+AGG | 0.565027 | 1.2:-5097477 | None:intergenic |
| CATTCTTCACCAATACCGTC+CGG | 0.570943 | 1.2:-5097262 | None:intergenic |
| AGTTTGCTTTAGATGACACT+GGG | 0.572182 | 1.2:+5098244 | MS.gene00502:CDS |
| TTGGAAGTTCTACAAGAGGT+TGG | 0.572389 | 1.2:+5098160 | MS.gene00502:CDS |
| CAAGGGATTTCTCTGCTAGT+GGG | 0.573642 | 1.2:+5095522 | MS.gene00502:CDS |
| AAGCTAGAGCATTGTTGGGG+AGG | 0.574341 | 1.2:+5096028 | MS.gene00502:CDS |
| TGTGTAGAGCAGATCCTACC+AGG | 0.574842 | 1.2:+5097661 | MS.gene00502:CDS |
| AATTCTTGGTGTTTGTTACG+GGG | 0.575668 | 1.2:+5097945 | MS.gene00502:CDS |
| GTGGAAGTGATGTTTAGCCT+TGG | 0.592412 | 1.2:+5098066 | MS.gene00502:CDS |
| TTGCTGAAAGAAACAAGCTA+AGG | 0.596133 | 1.2:+5096142 | MS.gene00502:CDS |
| AGGTACTCAGACATGATGGT+TGG | 0.597729 | 1.2:+5098141 | MS.gene00502:CDS |
| ACAGTACCCGCTTTGGACCG+AGG | 0.599977 | 1.2:-5096168 | None:intergenic |
| CCATTCACTTGCAAATGAGA+AGG | 0.606529 | 1.2:-5097481 | None:intergenic |
| GACTTGAAAATGCAATTCAG+AGG | 0.608528 | 1.2:+5098088 | MS.gene00502:CDS |
| AATGAGGTACTCAGACATGA+TGG | 0.610964 | 1.2:+5098137 | MS.gene00502:CDS |
| ACATCAGCACTTTGACCCCA+AGG | 0.611776 | 1.2:+5096106 | MS.gene00502:CDS |
| CTTCCTAATGGAATGCCGGA+CGG | 0.613074 | 1.2:+5097247 | MS.gene00502:CDS |
| GGAAATTGGAAATGGAAGCA+TGG | 0.614368 | 1.2:+5098685 | MS.gene00502:CDS |
| AAAGGAGTGCAGAACAATTG+TGG | 0.615821 | 1.2:+5097207 | MS.gene00502:CDS |
| ATGGTTGGAAGTTCTACAAG+AGG | 0.617168 | 1.2:+5098156 | MS.gene00502:CDS |
| AGGAAGCTAGAGCATTGTTG+GGG | 0.619715 | 1.2:+5096025 | MS.gene00502:intron |
| GGCGTGCTCTGGTCAAACCA+TGG | 0.623621 | 1.2:+5097377 | MS.gene00502:CDS |
| TCATAGTATCTGCACAGCAG+AGG | 0.625009 | 1.2:+5098196 | MS.gene00502:CDS |
| GCTACCACACTGCTCTATGG+TGG | 0.625696 | 1.2:+5097442 | MS.gene00502:CDS |
| ACCGGATTCCCTAGCAACAA+GGG | 0.628070 | 1.2:+5095505 | MS.gene00502:CDS |
| CAATACCCTGAAGCACGTGT+AGG | 0.628701 | 1.2:-5096083 | None:intergenic |
| TCAGCTCGACCAAAGATACC+TGG | 0.629775 | 1.2:-5097679 | None:intergenic |
| CATGGAATTTGGAGCCAAGG+AGG | 0.631501 | 1.2:+5097395 | MS.gene00502:CDS |
| TCTTTGGTCGAGCTGATAGG+TGG | 0.642084 | 1.2:+5097686 | MS.gene00502:CDS |
| GAAACAAGCTAAGGAAACCT+CGG | 0.642850 | 1.2:+5096151 | MS.gene00502:CDS |
| TGCAGCTAGAACATCTGTAG+TGG | 0.650193 | 1.2:+5097969 | MS.gene00502:CDS |
| GGAGGCTTGAATATCAAAGA+GGG | 0.650810 | 1.2:+5096046 | MS.gene00502:CDS |
| TTTGACCCCAAGGATGATCA+GGG | 0.657288 | 1.2:+5096116 | MS.gene00502:CDS |
| GGGAGGCTTGAATATCAAAG+AGG | 0.664217 | 1.2:+5096045 | MS.gene00502:CDS |
| GAGGAGCTGAAGCAATACAC+TGG | 0.667577 | 1.2:+5096264 | MS.gene00502:CDS |
| GCTAGGGAATCCGGTGACTG+TGG | 0.672695 | 1.2:-5095497 | None:intergenic |
| TTCTACCTCATAGTTTAACG+AGG | 0.682214 | 1.2:-5095627 | None:intergenic |
| AATAGCCCTGATCATCCTTG+GGG | 0.686368 | 1.2:-5096121 | None:intergenic |
| AGAGCAACACAAATTCGAAG+AGG | 0.702161 | 1.2:+5095472 | MS.gene00502:CDS |
| AAGGAAACCTCGGTCCAAAG+CGG | 0.708975 | 1.2:+5096161 | MS.gene00502:CDS |
| CTCGACCAAAGATACCTGGT+AGG | 0.732247 | 1.2:-5097675 | None:intergenic |
| TCTAACTGGAAATAATGACG+TGG | 0.743819 | 1.2:+5098047 | MS.gene00502:CDS |
| AACACCACCATAGAGCAGTG+TGG | 0.767738 | 1.2:-5097446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAGTGATTTGTTAATATA+TGG | - | chr1.2:5098910-5098929 | None:intergenic | 15.0% |
| !! | AATATGCAATTACATGATTA+TGG | + | chr1.2:5098927-5098946 | MS.gene00502:intron | 20.0% |
| !! | ACAAGATAATGATTATATGA+AGG | - | chr1.2:5096298-5096317 | None:intergenic | 20.0% |
| !! | ATAATCTACATTGTTTGATT+GGG | + | chr1.2:5096661-5096680 | MS.gene00502:intron | 20.0% |
| !! | GAAATTCTTGTTAAAAATTC+AGG | - | chr1.2:5098630-5098649 | None:intergenic | 20.0% |
| !!! | ATGTAGAGGATTATTTTTAA+TGG | - | chr1.2:5098512-5098531 | None:intergenic | 20.0% |
| !!! | CTTTTGTTATTAATTCTATC+AGG | + | chr1.2:5097541-5097560 | MS.gene00502:CDS | 20.0% |
| !!! | TTCTCTGATGTTTATTTTAT+CGG | + | chr1.2:5095855-5095874 | MS.gene00502:intron | 20.0% |
| ! | AAAATGTTGTTAGAGAGTAA+AGG | - | chr1.2:5095662-5095681 | None:intergenic | 25.0% |
| ! | AACAAATATGAAGGAAAATG+AGG | - | chr1.2:5097808-5097827 | None:intergenic | 25.0% |
| ! | AATAATCCTCTACATTATTG+TGG | + | chr1.2:5098517-5098536 | MS.gene00502:intron | 25.0% |
| ! | AATATGAATTGATGCTAACA+TGG | - | chr1.2:5096429-5096448 | None:intergenic | 25.0% |
| ! | AGAACAAAACTTTCAGTAAT+TGG | - | chr1.2:5097042-5097061 | None:intergenic | 25.0% |
| ! | AGAGAAAAATTCTAGCAATT+GGG | - | chr1.2:5098778-5098797 | None:intergenic | 25.0% |
| ! | AGATAATGATTATATGAAGG+TGG | - | chr1.2:5096295-5096314 | None:intergenic | 25.0% |
| ! | ATAAATAAAGAAACGCGTTA+TGG | - | chr1.2:5095910-5095929 | None:intergenic | 25.0% |
| ! | ATTAATTCTATCAGGAAAGA+TGG | + | chr1.2:5097549-5097568 | MS.gene00502:CDS | 25.0% |
| ! | CAAAACAACAATGTACATTA+TGG | - | chr1.2:5096332-5096351 | None:intergenic | 25.0% |
| ! | CAATCAAACAATGTAGATTA+TGG | - | chr1.2:5096662-5096681 | None:intergenic | 25.0% |
| ! | CATAATCTACATTGTTTGAT+TGG | + | chr1.2:5096660-5096679 | MS.gene00502:intron | 25.0% |
| ! | CATAATGTAACAGCATTTAT+AGG | - | chr1.2:5097123-5097142 | None:intergenic | 25.0% |
| ! | GGAATTAACATCTGTATAAA+TGG | - | chr1.2:5098724-5098743 | None:intergenic | 25.0% |
| ! | GTTAATATATGGTAATACCA+AGG | - | chr1.2:5098899-5098918 | None:intergenic | 25.0% |
| ! | TAATTTGATGTCAATGCATT+CGG | + | chr1.2:5096197-5096216 | MS.gene00502:CDS | 25.0% |
| ! | TGATCAAGCAAAAATATTCA+GGG | + | chr1.2:5098416-5098435 | MS.gene00502:CDS | 25.0% |
| ! | TTGATACTTGGAATATAATC+AGG | - | chr1.2:5099033-5099052 | None:intergenic | 25.0% |
| ! | TTGATCAAGCAAAAATATTC+AGG | + | chr1.2:5098415-5098434 | MS.gene00502:CDS | 25.0% |
| !! | CATTTTCCTTCATATTTGTT+TGG | + | chr1.2:5097808-5097827 | MS.gene00502:CDS | 25.0% |
| !!! | ATTGTTGTTTTGTTTGATTG+AGG | + | chr1.2:5096340-5096359 | MS.gene00502:intron | 25.0% |
| !!! | TCTTTGAAATTGAACTCTTT+CGG | - | chr1.2:5097998-5098017 | None:intergenic | 25.0% |
| !!! | TTGTTTCTGCTAATATTAGT+TGG | + | chr1.2:5095934-5095953 | MS.gene00502:intron | 25.0% |
| AAACATCAGAGAAGACATTA+TGG | - | chr1.2:5095848-5095867 | None:intergenic | 30.0% | |
| AACAAACACCAAGAATTTGT+TGG | - | chr1.2:5097942-5097961 | None:intergenic | 30.0% | |
| AGCAGTAATAAATGCCAAAA+AGG | + | chr1.2:5098362-5098381 | MS.gene00502:CDS | 30.0% | |
| ATGTTACTCATTGATGTTGT+TGG | - | chr1.2:5097508-5097527 | None:intergenic | 30.0% | |
| CAGCTTATCAAAACATAATG+AGG | + | chr1.2:5098121-5098140 | MS.gene00502:CDS | 30.0% | |
| CATAATGTAGCAGCATTTAT+AGG | - | chr1.2:5096777-5096796 | None:intergenic | 30.0% | |
| CATAATGTAGTAGCATTTAC+AGG | - | chr1.2:5096460-5096479 | None:intergenic | 30.0% | |
| CTGCAAAATATGAAAAGCAA+GGG | - | chr1.2:5098652-5098671 | None:intergenic | 30.0% | |
| GAGAGAAAAATTCTAGCAAT+TGG | - | chr1.2:5098779-5098798 | None:intergenic | 30.0% | |
| GCAATTCATATTGTGTTTGT+GGG | + | chr1.2:5095687-5095706 | MS.gene00502:intron | 30.0% | |
| TAAAACTCAAAACACTGCAA+CGG | - | chr1.2:5096844-5096863 | None:intergenic | 30.0% | |
| TCTCTCTATCACAATTCAAA+AGG | - | chr1.2:5095743-5095762 | None:intergenic | 30.0% | |
| TGAAGCTCAATCATTATACA+AGG | + | chr1.2:5098969-5098988 | MS.gene00502:CDS | 30.0% | |
| TGCAATTCATATTGTGTTTG+TGG | + | chr1.2:5095686-5095705 | MS.gene00502:intron | 30.0% | |
| TTCATTAAAAAGCTTCTTGC+TGG | - | chr1.2:5099102-5099121 | None:intergenic | 30.0% | |
| TTTAATGAATGCTTTGCGAT+TGG | + | chr1.2:5099113-5099132 | MS.gene00502:CDS | 30.0% | |
| TTTGCACCAAACAAATATGA+AGG | - | chr1.2:5097817-5097836 | None:intergenic | 30.0% | |
| ! | ATGAGCATGATTTGGATATT+GGG | - | chr1.2:5097848-5097867 | None:intergenic | 30.0% |
| ! | CAATAAACGCAGCTTTTAAA+AGG | - | chr1.2:5096371-5096390 | None:intergenic | 30.0% |
| ! | GAATGCATTGACATCAAATT+AGG | - | chr1.2:5096198-5096217 | None:intergenic | 30.0% |
| ! | TCATATTTTGCAGGCATTAA+CGG | + | chr1.2:5098659-5098678 | MS.gene00502:intron | 30.0% |
| !! | AAAATGCTCATTTTGATGCT+TGG | - | chr1.2:5097908-5097927 | None:intergenic | 30.0% |
| !! | AAATTCTTGGTGTTTGTTAC+GGG | + | chr1.2:5097944-5097963 | MS.gene00502:CDS | 30.0% |
| !! | CAAATTCTTGGTGTTTGTTA+CGG | + | chr1.2:5097943-5097962 | MS.gene00502:CDS | 30.0% |
| !!! | AATGAGCATTTTTTGGTTCA+AGG | + | chr1.2:5097916-5097935 | MS.gene00502:CDS | 30.0% |
| !!! | GCATCAAAATGAGCATTTTT+TGG | + | chr1.2:5097909-5097928 | MS.gene00502:CDS | 30.0% |
| !!! | TCTGATGTTTATTTTATCGG+TGG | + | chr1.2:5095858-5095877 | MS.gene00502:intron | 30.0% |
| AACACACTTTGATCCTAACA+TGG | - | chr1.2:5097092-5097111 | None:intergenic | 35.0% | |
| AAGTTGGCATATTACAGGTA+TGG | + | chr1.2:5098803-5098822 | MS.gene00502:intron | 35.0% | |
| ACATGATTATGGCAATGACA+GGG | + | chr1.2:5098938-5098957 | MS.gene00502:intron | 35.0% | |
| AGCAAAAATATTCAGGGATG+AGG | + | chr1.2:5098422-5098441 | MS.gene00502:CDS | 35.0% | |
| ATCAAACAATACCACAACGA+AGG | - | chr1.2:5096996-5097015 | None:intergenic | 35.0% | |
| ATTAAAAAGCTTCTTGCTGG+TGG | - | chr1.2:5099099-5099118 | None:intergenic | 35.0% | |
| ATTCATATTGTGTTTGTGGG+TGG | + | chr1.2:5095690-5095709 | MS.gene00502:intron | 35.0% | |
| ATTGAATCAGCTCTTCCTAA+TGG | + | chr1.2:5097235-5097254 | MS.gene00502:CDS | 35.0% | |
| CCTGCAAAATATGAAAAGCA+AGG | - | chr1.2:5098653-5098672 | None:intergenic | 35.0% | |
| CTTGAACAAATCTCCATGTT+AGG | + | chr1.2:5097076-5097095 | MS.gene00502:intron | 35.0% | |
| GAATTGTGATAGAGAGAAGA+TGG | + | chr1.2:5095746-5095765 | MS.gene00502:intron | 35.0% | |
| GACTTGAAAATGCAATTCAG+AGG | + | chr1.2:5098088-5098107 | MS.gene00502:CDS | 35.0% | |
| GATTGGGATGCTGAAATAAT+TGG | + | chr1.2:5097586-5097605 | MS.gene00502:CDS | 35.0% | |
| GGAACTTCAGGAAATAGATT+GGG | + | chr1.2:5097570-5097589 | MS.gene00502:CDS | 35.0% | |
| GGCATTTATTACTGCTAACA+AGG | - | chr1.2:5098358-5098377 | None:intergenic | 35.0% | |
| GTGTAAAAGAGATGATGATC+AGG | - | chr1.2:5096634-5096653 | None:intergenic | 35.0% | |
| TACATGATTATGGCAATGAC+AGG | + | chr1.2:5098937-5098956 | MS.gene00502:intron | 35.0% | |
| TATCCAAATCATGCTCATGA+AGG | + | chr1.2:5097850-5097869 | MS.gene00502:CDS | 35.0% | |
| TCTAACTGGAAATAATGACG+TGG | + | chr1.2:5098047-5098066 | MS.gene00502:CDS | 35.0% | |
| TGGAACTTCAGGAAATAGAT+TGG | + | chr1.2:5097569-5097588 | MS.gene00502:CDS | 35.0% | |
| TTCGCAGTTGAATTGATACT+TGG | - | chr1.2:5099045-5099064 | None:intergenic | 35.0% | |
| TTCTACCTCATAGTTTAACG+AGG | - | chr1.2:5095630-5095649 | None:intergenic | 35.0% | |
| TTGCTGAAAGAAACAAGCTA+AGG | + | chr1.2:5096142-5096161 | MS.gene00502:CDS | 35.0% | |
| ! | AACTAGAGAGAATGCGTTTT+TGG | + | chr1.2:5095774-5095793 | MS.gene00502:intron | 35.0% |
| ! | AATTTTTCTCTCCCAGAAGT+TGG | + | chr1.2:5098787-5098806 | MS.gene00502:CDS | 35.0% |
| ! | ACAAGCTTTTGCATCAAGAA+AGG | - | chr1.2:5098745-5098764 | None:intergenic | 35.0% |
| ! | ACATTTTCGCTTTCAATGAC+TGG | + | chr1.2:5097616-5097635 | MS.gene00502:CDS | 35.0% |
| ! | AGCTAAATCCTTTTGTAGAC+AGG | - | chr1.2:5097425-5097444 | None:intergenic | 35.0% |
| ! | AGTTTGCTTTAGATGACACT+GGG | + | chr1.2:5098244-5098263 | MS.gene00502:CDS | 35.0% |
| ! | CATGAGCATGATTTGGATAT+TGG | - | chr1.2:5097849-5097868 | None:intergenic | 35.0% |
| ! | CATTTTCGCTTTCAATGACT+GGG | + | chr1.2:5097617-5097636 | MS.gene00502:CDS | 35.0% |
| ! | GCGAAGTTGTTGATTAAACT+TGG | + | chr1.2:5099060-5099079 | MS.gene00502:CDS | 35.0% |
| ! | TTGAAGCGAAATCTCCTTTT+TGG | - | chr1.2:5098379-5098398 | None:intergenic | 35.0% |
| !! | AATTCTTGGTGTTTGTTACG+GGG | + | chr1.2:5097945-5097964 | MS.gene00502:CDS | 35.0% |
| !! | CCTTGCTTTTCATATTTTGC+AGG | + | chr1.2:5098650-5098669 | MS.gene00502:intron | 35.0% |
| !! | CCTTGGATTGGTTTCAAAAA+TGG | + | chr1.2:5099164-5099183 | MS.gene00502:CDS | 35.0% |
| !! | GGATTGGTTTCAAAAATGGA+GGG | + | chr1.2:5099168-5099187 | MS.gene00502:CDS | 35.0% |
| !! | TGGATTGGTTTCAAAAATGG+AGG | + | chr1.2:5099167-5099186 | MS.gene00502:CDS | 35.0% |
| !!! | CCATTTTTGAAACCAATCCA+AGG | - | chr1.2:5099167-5099186 | None:intergenic | 35.0% |
| !!! | GAATTGCATTTTCAAGTCCA+AGG | - | chr1.2:5098086-5098105 | None:intergenic | 35.0% |
| AACGGAACGGAAATTGGAAA+TGG | + | chr1.2:5098677-5098696 | MS.gene00502:CDS | 40.0% | |
| AACGTGTAGACATATTGACC+AGG | - | chr1.2:5096965-5096984 | None:intergenic | 40.0% | |
| AAGATGACCAAACAGTGTTC+AGG | - | chr1.2:5098831-5098850 | None:intergenic | 40.0% | |
| AAGATGCAGCTACAATGTTG+CGG | - | chr1.2:5096918-5096937 | None:intergenic | 40.0% | |
| ACCTGTAATATGCCAACTTC+TGG | - | chr1.2:5098802-5098821 | None:intergenic | 40.0% | |
| ACGTGTAGACATATTGACCA+GGG | - | chr1.2:5096964-5096983 | None:intergenic | 40.0% | |
| AGAAACGCGTTATGGTATGT+TGG | - | chr1.2:5095902-5095921 | None:intergenic | 40.0% | |
| AGAGAAATCCCTTGTTGCTA+GGG | - | chr1.2:5095516-5095535 | None:intergenic | 40.0% | |
| AGAGCAACACAAATTCGAAG+AGG | + | chr1.2:5095472-5095491 | MS.gene00502:CDS | 40.0% | |
| AGATGCACAGCTGAAACATT+CGG | - | chr1.2:5098870-5098889 | None:intergenic | 40.0% | |
| ATCAGGAAAGATGGAACTTC+AGG | + | chr1.2:5097558-5097577 | MS.gene00502:CDS | 40.0% | |
| ATCTTCAAGGACTGGAGATT+GGG | + | chr1.2:5095547-5095566 | MS.gene00502:CDS | 40.0% | |
| ATGAAGCTGTCACTGCTTAT+CGG | + | chr1.2:5097356-5097375 | MS.gene00502:CDS | 40.0% | |
| ATGCCTTCATGAGCATGATT+TGG | - | chr1.2:5097856-5097875 | None:intergenic | 40.0% | |
| ATGGTTGGAAGTTCTACAAG+AGG | + | chr1.2:5098156-5098175 | MS.gene00502:CDS | 40.0% | |
| CAATACCACAACGAAGGTTA+TGG | - | chr1.2:5096990-5097009 | None:intergenic | 40.0% | |
| CATGGAGATTGTTCAAGACT+TGG | - | chr1.2:5096411-5096430 | None:intergenic | 40.0% | |
| CCATTCACTTGCAAATGAGA+AGG | - | chr1.2:5097484-5097503 | None:intergenic | 40.0% | |
| CCTCTACATTATTGTGGTAC+AGG | + | chr1.2:5098523-5098542 | MS.gene00502:intron | 40.0% | |
| CCTGTAATATGCCAACTTCT+GGG | - | chr1.2:5098801-5098820 | None:intergenic | 40.0% | |
| CCTGTACCACAATAATGTAG+AGG | - | chr1.2:5098526-5098545 | None:intergenic | 40.0% | |
| CCTTCTCATTTGCAAGTGAA+TGG | + | chr1.2:5097481-5097500 | MS.gene00502:CDS | 40.0% | |
| CTAAATGAAGCTGCTCTAAC+TGG | + | chr1.2:5098033-5098052 | MS.gene00502:CDS | 40.0% | |
| GAAACAAGCTAAGGAAACCT+CGG | + | chr1.2:5096151-5096170 | MS.gene00502:CDS | 40.0% | |
| GACTGGGATGTTTGAATCAT+TGG | + | chr1.2:5097633-5097652 | MS.gene00502:CDS | 40.0% | |
| GCTCATTGCAAACTACTTTG+CGG | + | chr1.2:5096818-5096837 | MS.gene00502:intron | 40.0% | |
| GCTTAAAGCCAAATCCTTAG+AGG | + | chr1.2:5096245-5096264 | MS.gene00502:CDS | 40.0% | |
| GCTTCCAAATCTATGGATCA+AGG | + | chr1.2:5097321-5097340 | MS.gene00502:CDS | 40.0% | |
| GGAAATGTTCCACAAAGCAT+TGG | + | chr1.2:5097294-5097313 | MS.gene00502:CDS | 40.0% | |
| GGAAATTGGAAATGGAAGCA+TGG | + | chr1.2:5098685-5098704 | MS.gene00502:CDS | 40.0% | |
| GGAGGCTTGAATATCAAAGA+GGG | + | chr1.2:5096046-5096065 | MS.gene00502:CDS | 40.0% | |
| GTTCAAGGCCAACAAATTCT+TGG | + | chr1.2:5097931-5097950 | MS.gene00502:CDS | 40.0% | |
| TACCACAAGCTTTCCTCAAA+AGG | - | chr1.2:5097765-5097784 | None:intergenic | 40.0% | |
| TACTGCTAACAAGGTTCTGT+AGG | - | chr1.2:5098349-5098368 | None:intergenic | 40.0% | |
| TATCTTCAAGGACTGGAGAT+TGG | + | chr1.2:5095546-5095565 | MS.gene00502:CDS | 40.0% | |
| TATGGAACCTGAACACTGTT+TGG | + | chr1.2:5098821-5098840 | MS.gene00502:intron | 40.0% | |
| TCACTTGCAAATGAGAAGGT+AGG | - | chr1.2:5097480-5097499 | None:intergenic | 40.0% | |
| TCAGGAGCTGAATCTAAACT+AGG | - | chr1.2:5098612-5098631 | None:intergenic | 40.0% | |
| TCTGGTCAAACCATGGAATT+TGG | + | chr1.2:5097384-5097403 | MS.gene00502:CDS | 40.0% | |
| TGGGTGGCTGAAATTACATT+TGG | + | chr1.2:5095706-5095725 | MS.gene00502:intron | 40.0% | |
| TGGTGAAGAATGTAAGTTGC+AGG | + | chr1.2:5097273-5097292 | MS.gene00502:CDS | 40.0% | |
| TTATCTATCAGAGGCTGCAA+AGG | + | chr1.2:5097189-5097208 | MS.gene00502:intron | 40.0% | |
| TTGACCAGGGTTTCAAATTG+CGG | - | chr1.2:5096951-5096970 | None:intergenic | 40.0% | |
| TTGGAAGTTCTACAAGAGGT+TGG | + | chr1.2:5098160-5098179 | MS.gene00502:CDS | 40.0% | |
| ! | AAAGGAGTGCAGAACAATTG+TGG | + | chr1.2:5097207-5097226 | MS.gene00502:CDS | 40.0% |
| ! | AACCAAGCTTCATGGTTTGT+CGG | - | chr1.2:5099141-5099160 | None:intergenic | 40.0% |
| ! | AATGAGGTACTCAGACATGA+TGG | + | chr1.2:5098137-5098156 | MS.gene00502:CDS | 40.0% |
| ! | AATGGAAGCATGGCAAGATA+TGG | + | chr1.2:5098695-5098714 | MS.gene00502:CDS | 40.0% |
| ! | GAGTTTGCTTTAGATGACAC+TGG | + | chr1.2:5098243-5098262 | MS.gene00502:CDS | 40.0% |
| ! | GCTGCTTTCTTATCTATCAG+AGG | + | chr1.2:5097180-5097199 | MS.gene00502:intron | 40.0% |
| ! | GTTTCAGCTGTGCATCTTTT+TGG | + | chr1.2:5098873-5098892 | MS.gene00502:intron | 40.0% |
| ! | GTTTTCCATAACCTTCGTTG+TGG | + | chr1.2:5096982-5097001 | MS.gene00502:intron | 40.0% |
| ! | TTTTGCAGGCATTAACGGAA+CGG | + | chr1.2:5098664-5098683 | MS.gene00502:intron | 40.0% |
| !! | AACCTTTTGAGGAAAGCTTG+TGG | + | chr1.2:5097760-5097779 | MS.gene00502:CDS | 40.0% |
| !! | AAGGAAGCTAGAGCATTGTT+GGG | + | chr1.2:5096024-5096043 | MS.gene00502:intron | 40.0% |
| !! | TAAGGAAGCTAGAGCATTGT+TGG | + | chr1.2:5096023-5096042 | MS.gene00502:intron | 40.0% |
| !! | TAGGTCTCAATAGCTTGCTT+TGG | - | chr1.2:5098330-5098349 | None:intergenic | 40.0% |
| !! | TGTGTTTTTGCTGTGTGATG+CGG | + | chr1.2:5096480-5096499 | MS.gene00502:intron | 40.0% |
| !!! | GTGTGTGTTCGTTACTTTTG+AGG | + | chr1.2:5098444-5098463 | MS.gene00502:intron | 40.0% |
| AACCGACAAACCATGAAGCT+TGG | + | chr1.2:5099136-5099155 | MS.gene00502:CDS | 45.0% | |
| AACCTCATAATGCCGCAATG+TGG | - | chr1.2:5096885-5096904 | None:intergenic | 45.0% | |
| AATACCCTGAAGCACGTGTA+GGG | - | chr1.2:5096085-5096104 | None:intergenic | 45.0% | |
| AATAGCCCTGATCATCCTTG+GGG | - | chr1.2:5096124-5096143 | None:intergenic | 45.0% | |
| ACAAGGGATTTCTCTGCTAG+TGG | + | chr1.2:5095521-5095540 | MS.gene00502:CDS | 45.0% | |
| AGCTCTTCCTAATGGAATGC+CGG | + | chr1.2:5097243-5097262 | MS.gene00502:CDS | 45.0% | |
| AGCTGCCTCGTTAAACTATG+AGG | + | chr1.2:5095622-5095641 | MS.gene00502:CDS | 45.0% | |
| AGCTTGGTTCAACCTTGGAT+TGG | + | chr1.2:5099152-5099171 | MS.gene00502:CDS | 45.0% | |
| AGGTACTCAGACATGATGGT+TGG | + | chr1.2:5098141-5098160 | MS.gene00502:CDS | 45.0% | |
| ATCTGCACAGCAGAGGTTTA+AGG | + | chr1.2:5098203-5098222 | MS.gene00502:CDS | 45.0% | |
| ATTGCAGCATGATGCAGTTG+CGG | + | chr1.2:5096556-5096575 | MS.gene00502:intron | 45.0% | |
| CAAGGGATTTCTCTGCTAGT+GGG | + | chr1.2:5095522-5095541 | MS.gene00502:CDS | 45.0% | |
| CAAGGTTGAACCAAGCTTCA+TGG | - | chr1.2:5099149-5099168 | None:intergenic | 45.0% | |
| CAATAGCCCTGATCATCCTT+GGG | - | chr1.2:5096125-5096144 | None:intergenic | 45.0% | |
| CAGAGAAATCCCTTGTTGCT+AGG | - | chr1.2:5095517-5095536 | None:intergenic | 45.0% | |
| CAGATCCTACCAGGTATCTT+TGG | + | chr1.2:5097670-5097689 | MS.gene00502:CDS | 45.0% | |
| CATGAAGCTTGGTTCAACCT+TGG | + | chr1.2:5099147-5099166 | MS.gene00502:CDS | 45.0% | |
| CATTCTTCACCAATACCGTC+CGG | - | chr1.2:5097265-5097284 | None:intergenic | 45.0% | |
| CCAAATCTATGGATCAAGGC+AGG | + | chr1.2:5097325-5097344 | MS.gene00502:CDS | 45.0% | |
| CCCAGAAGTTGGCATATTAC+AGG | + | chr1.2:5098798-5098817 | MS.gene00502:CDS | 45.0% | |
| CCTGCCTTGATCCATAGATT+TGG | - | chr1.2:5097328-5097347 | None:intergenic | 45.0% | |
| GCAAAATTGCCTCAAGAAGC+AGG | - | chr1.2:5096227-5096246 | None:intergenic | 45.0% | |
| GGCATTAACGGAACGGAAAT+TGG | + | chr1.2:5098671-5098690 | MS.gene00502:intron | 45.0% | |
| GGGAGGCTTGAATATCAAAG+AGG | + | chr1.2:5096045-5096064 | MS.gene00502:CDS | 45.0% | |
| GTATCTTTGGTCGAGCTGAT+AGG | + | chr1.2:5097683-5097702 | MS.gene00502:CDS | 45.0% | |
| GTATTGCTTCAGCTCCTCTA+AGG | - | chr1.2:5096262-5096281 | None:intergenic | 45.0% | |
| GTGGAAGTGATGTTTAGCCT+TGG | + | chr1.2:5098066-5098085 | MS.gene00502:CDS | 45.0% | |
| GTGTTTCGGGAGCAATGTTA+TGG | - | chr1.2:5096588-5096607 | None:intergenic | 45.0% | |
| TCATAGTATCTGCACAGCAG+AGG | + | chr1.2:5098196-5098215 | MS.gene00502:CDS | 45.0% | |
| TGCAGCTAGAACATCTGTAG+TGG | + | chr1.2:5097969-5097988 | MS.gene00502:CDS | 45.0% | |
| TGCTGCAATTGCAGTGTGAT+TGG | - | chr1.2:5096545-5096564 | None:intergenic | 45.0% | |
| TGGAGCTGCTTCCAAATCTA+TGG | + | chr1.2:5097314-5097333 | MS.gene00502:CDS | 45.0% | |
| TGTAGCTGCATCTTGTGACT+CGG | + | chr1.2:5096924-5096943 | MS.gene00502:intron | 45.0% | |
| TTAGCTACCACACTGCTCTA+TGG | + | chr1.2:5097439-5097458 | MS.gene00502:CDS | 45.0% | |
| TTTACAACCGCACCACATTG+CGG | + | chr1.2:5096870-5096889 | MS.gene00502:intron | 45.0% | |
| TTTGACCCCAAGGATGATCA+GGG | + | chr1.2:5096116-5096135 | MS.gene00502:CDS | 45.0% | |
| ! | AACCATGGAATTTGGAGCCA+AGG | + | chr1.2:5097392-5097411 | MS.gene00502:CDS | 45.0% |
| ! | CTTCAGCTCCTCTAAGGATT+TGG | - | chr1.2:5096256-5096275 | None:intergenic | 45.0% |
| !! | AAGCAGCGTTGAACCTTTTG+AGG | + | chr1.2:5097749-5097768 | MS.gene00502:CDS | 45.0% |
| !! | AGGAAGCTAGAGCATTGTTG+GGG | + | chr1.2:5096025-5096044 | MS.gene00502:intron | 45.0% |
| !! | AGTGGGTTATCTTCAAGGAC+TGG | + | chr1.2:5095539-5095558 | MS.gene00502:CDS | 45.0% |
| !! | CTGCTAGTGGGTTATCTTCA+AGG | + | chr1.2:5095534-5095553 | MS.gene00502:CDS | 45.0% |
| !!! | TATTATTATTATGAATTTTA+AGG | + | chr1.2:5096005-5096024 | MS.gene00502:intron | 5.0% |
| AACACCACCATAGAGCAGTG+TGG | - | chr1.2:5097449-5097468 | None:intergenic | 50.0% | |
| AAGGAAACCTCGGTCCAAAG+CGG | + | chr1.2:5096161-5096180 | MS.gene00502:CDS | 50.0% | |
| AATGGAATGCCGGACGGTAT+TGG | + | chr1.2:5097253-5097272 | MS.gene00502:CDS | 50.0% | |
| ACATCAGCACTTTGACCCCA+AGG | + | chr1.2:5096106-5096125 | MS.gene00502:CDS | 50.0% | |
| ACCGGATTCCCTAGCAACAA+GGG | + | chr1.2:5095505-5095524 | MS.gene00502:CDS | 50.0% | |
| AGTAGAACGCCGCAAAGTAG+TGG | - | chr1.2:5096515-5096534 | None:intergenic | 50.0% | |
| ATACCGTCCGGCATTCCATT+AGG | - | chr1.2:5097253-5097272 | None:intergenic | 50.0% | |
| CAATACCCTGAAGCACGTGT+AGG | - | chr1.2:5096086-5096105 | None:intergenic | 50.0% | |
| CACCACATTGCGGCATTATG+AGG | + | chr1.2:5096880-5096899 | MS.gene00502:intron | 50.0% | |
| CAGACCACATCACGTGTTTC+GGG | - | chr1.2:5096601-5096620 | None:intergenic | 50.0% | |
| CATAATGCCGCAATGTGGTG+CGG | - | chr1.2:5096880-5096899 | None:intergenic | 50.0% | |
| CTCCTTGGCTCCAAATTCCA+TGG | - | chr1.2:5097397-5097416 | None:intergenic | 50.0% | |
| CTCGACCAAAGATACCTGGT+AGG | - | chr1.2:5097678-5097697 | None:intergenic | 50.0% | |
| CTTCCTAATGGAATGCCGGA+CGG | + | chr1.2:5097247-5097266 | MS.gene00502:CDS | 50.0% | |
| CTTTGACCCCAAGGATGATC+AGG | + | chr1.2:5096115-5096134 | MS.gene00502:CDS | 50.0% | |
| GAAGCAGCTCCAATGCTTTG+TGG | - | chr1.2:5097306-5097325 | None:intergenic | 50.0% | |
| GAGGAGCTGAAGCAATACAC+TGG | + | chr1.2:5096264-5096283 | MS.gene00502:CDS | 50.0% | |
| GCAATAGCCCTGATCATCCT+TGG | - | chr1.2:5096126-5096145 | None:intergenic | 50.0% | |
| GCAGACCACATCACGTGTTT+CGG | - | chr1.2:5096602-5096621 | None:intergenic | 50.0% | |
| GCTCTTTGTTACAGTGCAGC+AGG | + | chr1.2:5097718-5097737 | MS.gene00502:CDS | 50.0% | |
| GTAGAACGCCGCAAAGTAGT+GGG | - | chr1.2:5096514-5096533 | None:intergenic | 50.0% | |
| TCAGCTCGACCAAAGATACC+TGG | - | chr1.2:5097682-5097701 | None:intergenic | 50.0% | |
| TCCCTTGTTGCTAGGGAATC+CGG | - | chr1.2:5095509-5095528 | None:intergenic | 50.0% | |
| TCTTTGGTCGAGCTGATAGG+TGG | + | chr1.2:5097686-5097705 | MS.gene00502:CDS | 50.0% | |
| TGTGTAGAGCAGATCCTACC+AGG | + | chr1.2:5097661-5097680 | MS.gene00502:CDS | 50.0% | |
| ! | CATGGAATTTGGAGCCAAGG+AGG | + | chr1.2:5097395-5097414 | MS.gene00502:CDS | 50.0% |
| ! | GAATTTGGAGCCAAGGAGGT+TGG | + | chr1.2:5097399-5097418 | MS.gene00502:CDS | 50.0% |
| !! | AAGCTAGAGCATTGTTGGGG+AGG | + | chr1.2:5096028-5096047 | MS.gene00502:CDS | 50.0% |
| !! | GAGGTTGGCCTGTCTACAAA+AGG | + | chr1.2:5097414-5097433 | MS.gene00502:CDS | 50.0% |
| !! | GCTGTGCATCTTTTTGGCCT+TGG | + | chr1.2:5098879-5098898 | MS.gene00502:intron | 50.0% |
| AGGAAACCTCGGTCCAAAGC+GGG | + | chr1.2:5096162-5096181 | MS.gene00502:CDS | 55.0% | |
| AGGTAGCACAGTACCCGCTT+TGG | - | chr1.2:5096178-5096197 | None:intergenic | 55.0% | |
| CACCGGATTCCCTAGCAACA+AGG | + | chr1.2:5095504-5095523 | MS.gene00502:CDS | 55.0% | |
| CCGTTGCACCCACTACTTTG+CGG | + | chr1.2:5096503-5096522 | MS.gene00502:intron | 55.0% | |
| GCTACCACACTGCTCTATGG+TGG | + | chr1.2:5097442-5097461 | MS.gene00502:CDS | 55.0% | |
| TGCTCCCGAAACACGTGATG+TGG | + | chr1.2:5096594-5096613 | MS.gene00502:intron | 55.0% | |
| TGTAGACAGGCCAACCTCCT+TGG | - | chr1.2:5097412-5097431 | None:intergenic | 55.0% | |
| TTCGGTGAGCCTGCTTCTTG+AGG | + | chr1.2:5096215-5096234 | MS.gene00502:CDS | 55.0% | |
| ! | CGGTCCGCAATTTGAAACCC+TGG | + | chr1.2:5096944-5096963 | MS.gene00502:intron | 55.0% |
| !! | CCGCAAAGTAGTGGGTGCAA+CGG | - | chr1.2:5096506-5096525 | None:intergenic | 55.0% |
| AGCTGCCCTACACGTGCTTC+AGG | + | chr1.2:5096077-5096096 | MS.gene00502:CDS | 60.0% | |
| CACTGCTTATCGGCGTGCTC+TGG | + | chr1.2:5097366-5097385 | MS.gene00502:CDS | 60.0% | |
| GCTAGGGAATCCGGTGACTG+TGG | - | chr1.2:5095500-5095519 | None:intergenic | 60.0% | |
| GCTGCCCTACACGTGCTTCA+GGG | + | chr1.2:5096078-5096097 | MS.gene00502:CDS | 60.0% | |
| GGCGTGCTCTGGTCAAACCA+TGG | + | chr1.2:5097377-5097396 | MS.gene00502:CDS | 60.0% | |
| ! | ACAGTACCCGCTTTGGACCG+AGG | - | chr1.2:5096171-5096190 | None:intergenic | 60.0% |
| !! | CGAAGAGGCACCACAGTCAC+CGG | + | chr1.2:5095487-5095506 | MS.gene00502:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 5095452 | 5099269 | 5095452 | ID=MS.gene00502 |
| chr1.2 | mRNA | 5095452 | 5099269 | 5095452 | ID=MS.gene00502.t1;Parent=MS.gene00502 |
| chr1.2 | exon | 5095452 | 5095643 | 5095452 | ID=MS.gene00502.t1.exon1;Parent=MS.gene00502.t1 |
| chr1.2 | CDS | 5095452 | 5095643 | 5095452 | ID=cds.MS.gene00502.t1;Parent=MS.gene00502.t1 |
| chr1.2 | exon | 5096027 | 5096285 | 5096027 | ID=MS.gene00502.t1.exon2;Parent=MS.gene00502.t1 |
| chr1.2 | CDS | 5096027 | 5096285 | 5096027 | ID=cds.MS.gene00502.t1;Parent=MS.gene00502.t1 |
| chr1.2 | exon | 5097200 | 5098443 | 5097200 | ID=MS.gene00502.t1.exon3;Parent=MS.gene00502.t1 |
| chr1.2 | CDS | 5097200 | 5098443 | 5097200 | ID=cds.MS.gene00502.t1;Parent=MS.gene00502.t1 |
| chr1.2 | exon | 5098672 | 5098819 | 5098672 | ID=MS.gene00502.t1.exon4;Parent=MS.gene00502.t1 |
| chr1.2 | CDS | 5098672 | 5098819 | 5098672 | ID=cds.MS.gene00502.t1;Parent=MS.gene00502.t1 |
| chr1.2 | exon | 5098959 | 5099269 | 5098959 | ID=MS.gene00502.t1.exon5;Parent=MS.gene00502.t1 |
| chr1.2 | CDS | 5098959 | 5099269 | 5098959 | ID=cds.MS.gene00502.t1;Parent=MS.gene00502.t1 |
| Gene Sequence |
| Protein sequence |
