Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038070.t1 | XP_013468448.1 | 97.1 | 713 | 21 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1330.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038070.t1 | Q66GN3 | 57.9 | 719 | 293 | 3 | 1 | 713 | 25 | 739 | 6.9e-226 | 785.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038070.t1 | A0A072VWM1 | 97.1 | 713 | 21 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1330.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038070 | MS.gene051693 | PPI |
| MS.gene24475 | MS.gene038070 | PPI |
| MS.gene038070 | MS.gene00502 | PPI |
| MS.gene66459 | MS.gene038070 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038070.t1 | MTR_1g069630 | 96.774 | 713 | 23 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1427 |
| MS.gene038070.t1 | MTR_7g097230 | 68.436 | 716 | 220 | 3 | 1 | 713 | 16 | 728 | 0.0 | 980 |
| MS.gene038070.t1 | MTR_1g075480 | 57.858 | 719 | 289 | 7 | 1 | 713 | 35 | 745 | 0.0 | 786 |
| MS.gene038070.t1 | MTR_1g075480 | 57.858 | 719 | 289 | 7 | 1 | 713 | 22 | 732 | 0.0 | 786 |
| MS.gene038070.t1 | MTR_1g075480 | 57.618 | 722 | 289 | 8 | 1 | 713 | 35 | 748 | 0.0 | 781 |
| MS.gene038070.t1 | MTR_7g097230 | 67.084 | 559 | 181 | 2 | 1 | 556 | 16 | 574 | 0.0 | 743 |
| MS.gene038070.t1 | MTR_1g075480 | 58.500 | 600 | 238 | 4 | 15 | 609 | 35 | 628 | 0.0 | 673 |
| MS.gene038070.t1 | MTR_5g026810 | 47.774 | 674 | 344 | 5 | 40 | 712 | 26 | 692 | 0.0 | 588 |
| MS.gene038070.t1 | MTR_8g071330 | 45.175 | 684 | 368 | 4 | 29 | 712 | 9 | 685 | 0.0 | 575 |
| MS.gene038070.t1 | MTR_1g018040 | 44.028 | 720 | 381 | 12 | 6 | 712 | 6 | 716 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038070.t1 | AT4G28600 | 58.693 | 719 | 287 | 3 | 1 | 713 | 25 | 739 | 0.0 | 798 |
| MS.gene038070.t1 | AT4G28600 | 58.693 | 719 | 287 | 3 | 1 | 713 | 25 | 739 | 0.0 | 798 |
| MS.gene038070.t1 | AT4G28600 | 58.287 | 724 | 287 | 4 | 1 | 713 | 25 | 744 | 0.0 | 793 |
| MS.gene038070.t1 | AT2G43040 | 47.633 | 676 | 344 | 5 | 40 | 712 | 32 | 700 | 0.0 | 569 |
| MS.gene038070.t1 | AT2G43040 | 47.633 | 676 | 344 | 5 | 40 | 712 | 32 | 700 | 0.0 | 569 |
| MS.gene038070.t1 | AT1G27460 | 41.399 | 715 | 380 | 10 | 6 | 712 | 6 | 689 | 8.75e-165 | 491 |
| MS.gene038070.t1 | AT1G27460 | 41.818 | 715 | 381 | 10 | 6 | 712 | 6 | 693 | 1.08e-164 | 491 |
| MS.gene038070.t1 | AT1G27460 | 42.545 | 550 | 292 | 8 | 6 | 547 | 6 | 539 | 8.48e-127 | 388 |
Find 160 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCGGCGTTCTTTGTTTC+TGG | 0.051091 | 1.2:+52748844 | None:intergenic |
| TTTCCGGTTCACCATGATTA+TGG | 0.184771 | 1.2:+52748813 | None:intergenic |
| TTCATTTGCTCTGTCTGTTT+CGG | 0.188123 | 1.2:-52747935 | MS.gene038070:CDS |
| TCATTTGCTCTGTCTGTTTC+GGG | 0.193859 | 1.2:-52747934 | MS.gene038070:CDS |
| ATCGAGTTTAGCCAATTATT+TGG | 0.205375 | 1.2:-52747905 | MS.gene038070:CDS |
| TACCCTCAGCCTTGTGAAAA+AGG | 0.205859 | 1.2:+52746403 | None:intergenic |
| CAGGCTCTTGAAAGGTTTAA+AGG | 0.236026 | 1.2:-52748731 | MS.gene038070:intron |
| ATCATCTGCACACTCAAAAT+TGG | 0.251662 | 1.2:-52747596 | MS.gene038070:CDS |
| CCAATCTTGCAAAGTTATTA+TGG | 0.251753 | 1.2:-52748346 | MS.gene038070:CDS |
| CATTCAGCACCAAAGTTATC+AGG | 0.259185 | 1.2:+52748291 | None:intergenic |
| ACACGTTCCCGGTTTGTTAA+TGG | 0.260326 | 1.2:-52747749 | MS.gene038070:CDS |
| GGCGAGCACTTCTTCATAAA+TGG | 0.260430 | 1.2:-52748176 | MS.gene038070:CDS |
| GAGTAATTCTTCCAAATAAT+TGG | 0.272977 | 1.2:+52747894 | None:intergenic |
| CCATAATAACTTTGCAAGAT+TGG | 0.280709 | 1.2:+52748346 | None:intergenic |
| CCATTTGAGAACGTAGATTA+GGG | 0.289798 | 1.2:+52748073 | None:intergenic |
| TTCTGCTTCTTCTATATTAC+CGG | 0.290062 | 1.2:+52749441 | None:intergenic |
| TCAGCAAGCTTCCACAATTC+TGG | 0.299846 | 1.2:+52748228 | None:intergenic |
| GCCTCTTCTATGTTGTTTGC+CGG | 0.304221 | 1.2:+52748036 | None:intergenic |
| CAAATTCAGAGCAAAAGTTT+TGG | 0.314010 | 1.2:-52747181 | MS.gene038070:CDS |
| TGCAAAGTGCGTCATAAAAC+TGG | 0.329264 | 1.2:-52747419 | MS.gene038070:CDS |
| AACAAACCGGGAACGTGTTC+CGG | 0.330656 | 1.2:+52747754 | None:intergenic |
| TTCCGGTTCACCATGATTAT+GGG | 0.345463 | 1.2:+52748814 | None:intergenic |
| TTCTTGGAAGAAGCTATATA+AGG | 0.353884 | 1.2:-52747158 | MS.gene038070:intron |
| GATCTAGCTCTTTGTAATTA+CGG | 0.355641 | 1.2:-52747838 | MS.gene038070:CDS |
| GAAAGGCCGGAACACGTTCC+CGG | 0.359395 | 1.2:-52747760 | MS.gene038070:CDS |
| TCTAAAAGCAAAATCGTTGC+AGG | 0.362819 | 1.2:-52748750 | MS.gene038070:CDS |
| GGAAGATACGAGTATCAAAA+AGG | 0.369028 | 1.2:-52748944 | MS.gene038070:CDS |
| TACTGAAGGGTCTCTCATTC+CGG | 0.371242 | 1.2:+52747501 | None:intergenic |
| AATGGACGGCTCGTTTGTTC+CGG | 0.372709 | 1.2:-52748055 | MS.gene038070:CDS |
| CATAATAACTTTGCAAGATT+GGG | 0.372836 | 1.2:+52748347 | None:intergenic |
| GGAACTTGGAAGTGGAAATA+TGG | 0.379485 | 1.2:-52746941 | MS.gene038070:CDS |
| TGAATCTTTGCTACAGTCCC+TGG | 0.383146 | 1.2:+52748144 | None:intergenic |
| GAAGGTGGTTCCAATGTTAA+AGG | 0.388143 | 1.2:-52747397 | MS.gene038070:CDS |
| GTGAAGCTACTTTGTCTTAC+CGG | 0.388356 | 1.2:-52748197 | MS.gene038070:CDS |
| AATGTTGCAAAATTCTATCT+TGG | 0.388770 | 1.2:-52747625 | MS.gene038070:CDS |
| CTTTGGATCAGACTGGGAAA+TGG | 0.392510 | 1.2:-52747303 | MS.gene038070:CDS |
| TCAGAGAGCACTTGAGAGCT+TGG | 0.397172 | 1.2:-52747671 | MS.gene038070:CDS |
| GCGTTCTTTGTTTCTGGAAA+GGG | 0.399083 | 1.2:+52748850 | None:intergenic |
| ATCTATTATCAACGCTGCTT+TGG | 0.399909 | 1.2:-52747320 | MS.gene038070:CDS |
| TCAGACTGGGAAATGGGATC+AGG | 0.402096 | 1.2:-52747296 | MS.gene038070:CDS |
| GCTTCTGCTTGGTATAATCT+TGG | 0.405820 | 1.2:-52746426 | MS.gene038070:CDS |
| CCTACGCTCAGGGGAGCAAT+TGG | 0.409024 | 1.2:-52749572 | MS.gene038070:CDS |
| AAGTTATCAGGCAAGCCTTC+AGG | 0.409413 | 1.2:+52748303 | None:intergenic |
| ACAGAATGTATAGACATTTC+CGG | 0.415399 | 1.2:+52748797 | None:intergenic |
| TCCATTTGAGAACGTAGATT+AGG | 0.418331 | 1.2:+52748072 | None:intergenic |
| CCGAGATCGTGCTAGGAACT+TGG | 0.420476 | 1.2:-52746955 | MS.gene038070:CDS |
| TTTAGAAGCCATTAACAAAC+CGG | 0.423076 | 1.2:+52747741 | None:intergenic |
| TGGTGCTGAATGTAAATTGC+AGG | 0.428911 | 1.2:-52748280 | MS.gene038070:CDS |
| ATCTGAGGCACTTCAAGCCT+TGG | 0.438993 | 1.2:-52747542 | MS.gene038070:CDS |
| TCTCTCTCAATAGAATTGAA+TGG | 0.439125 | 1.2:-52747981 | MS.gene038070:CDS |
| GAATTTCTCGAAATCAGAAA+TGG | 0.439970 | 1.2:+52747573 | None:intergenic |
| GTACTTCAGCAGTGGAGATT+AGG | 0.444856 | 1.2:+52746526 | None:intergenic |
| CATGGAATCTTTCACTTCGA+TGG | 0.444879 | 1.2:+52747860 | None:intergenic |
| ACCCCTTCTTCTGCAAGACT+AGG | 0.448007 | 1.2:+52747703 | None:intergenic |
| TTCCCATAATCATGGTGAAC+CGG | 0.454699 | 1.2:-52748816 | MS.gene038070:CDS |
| TTTGGATCAGACTGGGAAAT+GGG | 0.455022 | 1.2:-52747302 | MS.gene038070:CDS |
| CTCTCTCAATAGAATTGAAT+GGG | 0.455430 | 1.2:-52747980 | MS.gene038070:CDS |
| GGCGTTCTTTGTTTCTGGAA+AGG | 0.457269 | 1.2:+52748849 | None:intergenic |
| GGCGTGTCTTTCAAAATCTA+AGG | 0.457296 | 1.2:-52746868 | MS.gene038070:CDS |
| CCCCTTCTTCTGCAAGACTA+GGG | 0.461370 | 1.2:+52747704 | None:intergenic |
| CGGAGCAGGTAAGGACTTGA+TGG | 0.465727 | 1.2:-52747818 | MS.gene038070:CDS |
| CCCTAATCTACGTTCTCAAA+TGG | 0.465907 | 1.2:-52748073 | MS.gene038070:CDS |
| ATTAGGCTGCGGACATGGCC+AGG | 0.467685 | 1.2:+52746543 | None:intergenic |
| CAAAGTTATTATGGACATAG+TGG | 0.467812 | 1.2:-52748337 | MS.gene038070:CDS |
| ACGCCTCTGCATCATGCCAC+TGG | 0.468078 | 1.2:+52746886 | None:intergenic |
| GAAGGCTTGCCTGATAACTT+TGG | 0.468639 | 1.2:-52748300 | MS.gene038070:CDS |
| CATAAATGGAATCTCGATCC+AGG | 0.473610 | 1.2:-52748162 | MS.gene038070:CDS |
| CATCCGAATCTCTTGTCACC+AGG | 0.475993 | 1.2:-52749525 | MS.gene038070:CDS |
| CTACGCTCAGGGGAGCAATT+GGG | 0.477613 | 1.2:-52749571 | MS.gene038070:CDS |
| GTCCCTGGTGACAAGAGATT+CGG | 0.477939 | 1.2:+52749522 | None:intergenic |
| ACAATGAAGTTCCTACGCTC+AGG | 0.478204 | 1.2:-52749583 | MS.gene038070:CDS |
| CAGTAACCATCCTTTAACAT+TGG | 0.480051 | 1.2:+52747387 | None:intergenic |
| GTCTTTGAGGGAATAGATAT+AGG | 0.481239 | 1.2:-52748899 | MS.gene038070:CDS |
| AACCCTAGTCTTGCAGAAGA+AGG | 0.483388 | 1.2:-52747706 | MS.gene038070:CDS |
| CAGGAAGCTAGAGCATTACT+AGG | 0.486649 | 1.2:-52748965 | MS.gene038070:CDS |
| CGTTCTGCCAGCAGTTTCCA+AGG | 0.488431 | 1.2:+52747525 | None:intergenic |
| TGAGGGTAAAATATCATCAT+TGG | 0.491744 | 1.2:-52746388 | MS.gene038070:CDS |
| TATTTGGAAGAATTACTCCC+TGG | 0.494270 | 1.2:-52747889 | MS.gene038070:CDS |
| GTGACAAGAGATTCGGATGA+AGG | 0.497025 | 1.2:+52749529 | None:intergenic |
| GAAACTGCTGGCAGAACGAC+CGG | 0.498236 | 1.2:-52747520 | MS.gene038070:CDS |
| GCTCTTTGTAATTACGGAGC+AGG | 0.499405 | 1.2:-52747832 | MS.gene038070:CDS |
| GATGCTTTAGACATTGATCC+TGG | 0.500078 | 1.2:-52746561 | MS.gene038070:CDS |
| TTGTAATTACGGAGCAGGTA+AGG | 0.501729 | 1.2:-52747827 | MS.gene038070:CDS |
| TCACTTCGATGGATAGTCCC+AGG | 0.503053 | 1.2:+52747871 | None:intergenic |
| AGCTGCATTACACGTCTTTG+AGG | 0.505490 | 1.2:-52748912 | MS.gene038070:CDS |
| AATCGTTGCAGGCTCTTGAA+AGG | 0.510742 | 1.2:-52748739 | MS.gene038070:CDS |
| TTGAGCTGCTTCCAGAATTG+TGG | 0.513561 | 1.2:-52748239 | MS.gene038070:CDS |
| CGCCTCTGCATCATGCCACT+GGG | 0.513605 | 1.2:+52746887 | None:intergenic |
| AACGCTGCTTTGGATCAGAC+TGG | 0.514212 | 1.2:-52747310 | MS.gene038070:CDS |
| AATTACAAAGAGCTAGATCA+TGG | 0.514312 | 1.2:+52747842 | None:intergenic |
| GCTGCATTACACGTCTTTGA+GGG | 0.518869 | 1.2:-52748911 | MS.gene038070:CDS |
| CTGAGATGGTATAGTACTGA+AGG | 0.523029 | 1.2:+52747487 | None:intergenic |
| GCTAAAATTCAAATTGCACT+TGG | 0.524807 | 1.2:-52747253 | MS.gene038070:CDS |
| ATTTGGAAGAATTACTCCCT+GGG | 0.525471 | 1.2:-52747888 | MS.gene038070:CDS |
| GAATTATCTCTGCGAGAAAG+TGG | 0.528266 | 1.2:-52749421 | MS.gene038070:CDS |
| TGGAGATTAGGCTGCGGACA+TGG | 0.529432 | 1.2:+52746538 | None:intergenic |
| AAGAAACATTCCCATAATCA+TGG | 0.530663 | 1.2:-52748824 | MS.gene038070:CDS |
| AAGCTGAGTGTACGTCTCAA+TGG | 0.530685 | 1.2:+52747216 | None:intergenic |
| CTTCAAGCCTTGGAAACTGC+TGG | 0.530954 | 1.2:-52747532 | MS.gene038070:CDS |
| ACCCTAGTCTTGCAGAAGAA+GGG | 0.531321 | 1.2:-52747705 | MS.gene038070:CDS |
| CCAAGTTCCTAGCACGATCT+CGG | 0.533706 | 1.2:+52746955 | None:intergenic |
| GAAAGGTGGTCTAAAATTGA+AGG | 0.534995 | 1.2:+52747955 | None:intergenic |
| GGAAATGTCTATACATTCTG+TGG | 0.537831 | 1.2:-52748795 | MS.gene038070:CDS |
| AATTGTTGAGTGATAGAGAA+AGG | 0.538244 | 1.2:-52747777 | MS.gene038070:CDS |
| AGGCGTAATGTATGAAGCAA+AGG | 0.544212 | 1.2:-52746616 | MS.gene038070:CDS |
| AGAGCACTTGAGAGCTTGGA+CGG | 0.546004 | 1.2:-52747667 | MS.gene038070:CDS |
| TCGTGCTAGGAACTTGGAAG+TGG | 0.547148 | 1.2:-52746949 | MS.gene038070:CDS |
| AGTGATCATTCTTTCCTACC+TGG | 0.549462 | 1.2:-52749487 | MS.gene038070:CDS |
| GGCGTAATGTATGAAGCAAA+GGG | 0.550921 | 1.2:-52746615 | MS.gene038070:CDS |
| AATAATTGGCTAAACTCGAT+AGG | 0.551034 | 1.2:+52747908 | None:intergenic |
| TATAGAATATGTCATCTGAA+AGG | 0.552996 | 1.2:+52746306 | None:intergenic |
| CAATGAAGTTCCTACGCTCA+GGG | 0.553279 | 1.2:-52749582 | MS.gene038070:CDS |
| TGACATCTAGAAGCAGAATA+CGG | 0.557828 | 1.2:+52746837 | None:intergenic |
| ACAGATTGAATGCTTCTGCT+TGG | 0.559962 | 1.2:-52746437 | MS.gene038070:CDS |
| CAGACTGGGAAATGGGATCA+GGG | 0.561941 | 1.2:-52747295 | MS.gene038070:CDS |
| GTTGAGTGATAGAGAAAGGC+CGG | 0.563279 | 1.2:-52747773 | MS.gene038070:CDS |
| CCCTAGTCTTGCAGAAGAAG+GGG | 0.568534 | 1.2:-52747704 | MS.gene038070:CDS |
| GTGGTTCCAATGTTAAAGGA+TGG | 0.575049 | 1.2:-52747393 | MS.gene038070:CDS |
| TTCCCAGTGGCATGATGCAG+AGG | 0.575200 | 1.2:-52746889 | MS.gene038070:CDS |
| CACTTCGATGGATAGTCCCA+GGG | 0.576038 | 1.2:+52747872 | None:intergenic |
| TGGAAAACTTGATCACAAGT+TGG | 0.577745 | 1.2:-52749467 | MS.gene038070:CDS |
| AGGGTAACCGAGATCGTGCT+AGG | 0.578066 | 1.2:-52746962 | MS.gene038070:CDS |
| ACTTCCTGAAAAGAAGTCCC+TGG | 0.578708 | 1.2:+52749507 | None:intergenic |
| CAGCGTATTCTAAACTGAGA+TGG | 0.582160 | 1.2:+52747473 | None:intergenic |
| AAGGATGGTTACTGTTGGCA+CGG | 0.592491 | 1.2:-52747378 | MS.gene038070:CDS |
| CAGCTCAACTGCCTTGCTCA+CGG | 0.599337 | 1.2:+52748254 | None:intergenic |
| GATTATGGGAATGTTTCTTG+CGG | 0.600308 | 1.2:+52748828 | None:intergenic |
| GTGGAATCTTCATTGCCTGA+AGG | 0.600900 | 1.2:-52748318 | MS.gene038070:CDS |
| TTAGAAGCCATTAACAAACC+GGG | 0.606436 | 1.2:+52747742 | None:intergenic |
| ATAAATGGAATCTCGATCCA+GGG | 0.607813 | 1.2:-52748161 | MS.gene038070:CDS |
| ATTGCAGGAGACCGTGAGCA+AGG | 0.607861 | 1.2:-52748265 | MS.gene038070:CDS |
| ATTTATGAAGAAGTGCTCGC+CGG | 0.609816 | 1.2:+52748178 | None:intergenic |
| TGTCATCTGAAAGGTTCAAG+TGG | 0.610618 | 1.2:+52746315 | None:intergenic |
| ACGCTGCTTTGGATCAGACT+GGG | 0.611127 | 1.2:-52747309 | MS.gene038070:CDS |
| TGAGATGGTATAGTACTGAA+GGG | 0.615082 | 1.2:+52747488 | None:intergenic |
| CCAATTGCTCCCCTGAGCGT+AGG | 0.615359 | 1.2:+52749572 | None:intergenic |
| CGCTCAGGGGAGCAATTGGG+AGG | 0.616293 | 1.2:-52749568 | MS.gene038070:CDS |
| AGGTAAGGACTTGATGGCAA+TGG | 0.618555 | 1.2:-52747812 | MS.gene038070:CDS |
| GCGTCTAAGTACTTCAGCAG+TGG | 0.622569 | 1.2:+52746518 | None:intergenic |
| AGCAAAGGGCCTTTACAAAG+AGG | 0.624063 | 1.2:-52746601 | MS.gene038070:CDS |
| AAGTGCGTCATAAAACTGGA+AGG | 0.625420 | 1.2:-52747415 | MS.gene038070:CDS |
| AAACAGACAGAGCAAATGAA+AGG | 0.626924 | 1.2:+52747938 | None:intergenic |
| GTTTAGAATACGCTGAACAA+AGG | 0.629222 | 1.2:-52747465 | MS.gene038070:CDS |
| GAAATGTCTATACATTCTGT+GGG | 0.629408 | 1.2:-52748794 | MS.gene038070:CDS |
| TGTTAAAGGATGGTTACTGT+TGG | 0.631562 | 1.2:-52747383 | MS.gene038070:CDS |
| ATCCGAATCTCTTGTCACCA+GGG | 0.633299 | 1.2:-52749524 | MS.gene038070:CDS |
| ATTTGAGAACGTAGATTAGG+GGG | 0.633365 | 1.2:+52748075 | None:intergenic |
| AATCTACGTTCTCAAATGGA+CGG | 0.634441 | 1.2:-52748069 | MS.gene038070:CDS |
| GCTTCTAGATGTCATGCACT+CGG | 0.643649 | 1.2:-52746828 | MS.gene038070:intron |
| CTTGATCACAAGTTGGACAC+CGG | 0.647590 | 1.2:-52749460 | MS.gene038070:CDS |
| TCCGGCAAACAACATAGAAG+AGG | 0.651451 | 1.2:-52748037 | MS.gene038070:CDS |
| CATTTGAGAACGTAGATTAG+GGG | 0.654581 | 1.2:+52748074 | None:intergenic |
| CAGCAGTGGAGATTAGGCTG+CGG | 0.655573 | 1.2:+52746532 | None:intergenic |
| GAAATTCAAGAGACAATCTG+AGG | 0.658610 | 1.2:-52747557 | MS.gene038070:CDS |
| CAGACAGAGCAAATGAAAGG+TGG | 0.667903 | 1.2:+52747941 | None:intergenic |
| TGCGTCATAAAACTGGAAGG+TGG | 0.682113 | 1.2:-52747412 | MS.gene038070:CDS |
| AATGAAGTTCCTACGCTCAG+GGG | 0.692085 | 1.2:-52749581 | MS.gene038070:CDS |
| TGTACATCAGTCTTTCCCAG+TGG | 0.736555 | 1.2:-52746902 | MS.gene038070:CDS |
| TAAGACAAAGTAGCTTCACG+AGG | 0.755950 | 1.2:+52748201 | None:intergenic |
| AAGTGGCGTGTTAAACTACG+AGG | 0.762852 | 1.2:-52749404 | MS.gene038070:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAGTTTTTTTTTTTTTT+TGG | + | chr1.2:52746849-52746868 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTTCAAATTTAAC+AGG | - | chr1.2:52749261-52749280 | MS.gene038070:intron | 15.0% |
| !! | GTGACTATAACTATTAAAAT+TGG | - | chr1.2:52748823-52748842 | MS.gene038070:CDS | 20.0% |
| !!! | TAAAAAAGTGAAGTATTTTG+AGG | + | chr1.2:52746526-52746545 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCATAAACTATCT+TGG | + | chr1.2:52747389-52747408 | None:intergenic | 20.0% |
| ! | AAACTATCTTGGATATCTAA+TGG | + | chr1.2:52747378-52747397 | None:intergenic | 25.0% |
| ! | AAATATTCAATCAGTACAAG+TGG | + | chr1.2:52748778-52748797 | None:intergenic | 25.0% |
| ! | AAATTGGATAAATGTTTCAC+TGG | - | chr1.2:52748839-52748858 | MS.gene038070:CDS | 25.0% |
| ! | AATGTTGCAAAATTCTATCT+TGG | - | chr1.2:52748272-52748291 | MS.gene038070:CDS | 25.0% |
| ! | CATAATAACTTTGCAAGATT+GGG | + | chr1.2:52747553-52747572 | None:intergenic | 25.0% |
| ! | CATCTCAAGAAAAAGTTAAA+TGG | + | chr1.2:52749176-52749195 | None:intergenic | 25.0% |
| ! | GAGTAATTCTTCCAAATAAT+TGG | + | chr1.2:52748006-52748025 | None:intergenic | 25.0% |
| ! | TATCTATACCATTTGTGATA+GGG | - | chr1.2:52748916-52748935 | MS.gene038070:CDS | 25.0% |
| ! | TCACAAATGGTATAGATAAA+AGG | + | chr1.2:52748914-52748933 | None:intergenic | 25.0% |
| ! | TTATCTATACCATTTGTGAT+AGG | - | chr1.2:52748915-52748934 | MS.gene038070:CDS | 25.0% |
| ! | TTCAAGTGATAATAATCTGT+TGG | + | chr1.2:52749208-52749227 | None:intergenic | 25.0% |
| ! | TTGTAGCTACTATTCTAATT+TGG | - | chr1.2:52746886-52746905 | MS.gene038070:CDS | 25.0% |
| !! | TAAGTTATCATGTGGATTTT+TGG | - | chr1.2:52746544-52746563 | MS.gene038070:CDS | 25.0% |
| !!! | CACTTTTTTAAGTTATCATG+TGG | - | chr1.2:52746536-52746555 | MS.gene038070:CDS | 25.0% |
| !!! | CATTTAACTTTTTCTTGAGA+TGG | - | chr1.2:52749174-52749193 | MS.gene038070:intron | 25.0% |
| !!! | GTTGTTTTTCTTCTATATAG+TGG | - | chr1.2:52747786-52747805 | MS.gene038070:CDS | 25.0% |
| !!! | TTTTTCTTCTATATAGTGGA+GGG | - | chr1.2:52747790-52747809 | MS.gene038070:CDS | 25.0% |
| !!! | TTTTTTTTTGGGTACATAGA+CGG | + | chr1.2:52746837-52746856 | None:intergenic | 25.0% |
| AAAATATGCATGCAATCTAC+AGG | - | chr1.2:52746913-52746932 | MS.gene038070:CDS | 30.0% | |
| AAGAAACATTCCCATAATCA+TGG | - | chr1.2:52747073-52747092 | MS.gene038070:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr1.2:52746617-52746636 | None:intergenic | 30.0% | |
| AATAATTGGCTAAACTCGAT+AGG | + | chr1.2:52747992-52748011 | None:intergenic | 30.0% | |
| AATTACAAAGAGCTAGATCA+TGG | + | chr1.2:52748058-52748077 | None:intergenic | 30.0% | |
| AATTGTTGAGTGATAGAGAA+AGG | - | chr1.2:52748120-52748139 | MS.gene038070:CDS | 30.0% | |
| ACAGAATGTATAGACATTTC+CGG | + | chr1.2:52747103-52747122 | None:intergenic | 30.0% | |
| ATCGAGTTTAGCCAATTATT+TGG | - | chr1.2:52747992-52748011 | MS.gene038070:CDS | 30.0% | |
| ATTCAGCGTTTGTAGAATTA+AGG | - | chr1.2:52746591-52746610 | MS.gene038070:CDS | 30.0% | |
| CAAAGTTATTATGGACATAG+TGG | - | chr1.2:52747560-52747579 | MS.gene038070:CDS | 30.0% | |
| CCAATCTTGCAAAGTTATTA+TGG | - | chr1.2:52747551-52747570 | MS.gene038070:CDS | 30.0% | |
| CCATAATAACTTTGCAAGAT+TGG | + | chr1.2:52747554-52747573 | None:intergenic | 30.0% | |
| CTCTCTCAATAGAATTGAAT+GGG | - | chr1.2:52747917-52747936 | MS.gene038070:CDS | 30.0% | |
| GAAATGTCTATACATTCTGT+GGG | - | chr1.2:52747103-52747122 | MS.gene038070:intron | 30.0% | |
| GAATTTCTCGAAATCAGAAA+TGG | + | chr1.2:52748327-52748346 | None:intergenic | 30.0% | |
| GCTAAAATTCAAATTGCACT+TGG | - | chr1.2:52748644-52748663 | MS.gene038070:intron | 30.0% | |
| TAAGAATCAAAAAACCAGCA+AGG | + | chr1.2:52747195-52747214 | None:intergenic | 30.0% | |
| TAGCATATACGAAAACAGAT+TGG | - | chr1.2:52747461-52747480 | MS.gene038070:CDS | 30.0% | |
| TCTCTCTCAATAGAATTGAA+TGG | - | chr1.2:52747916-52747935 | MS.gene038070:CDS | 30.0% | |
| TGAGGGTAAAATATCATCAT+TGG | - | chr1.2:52749509-52749528 | MS.gene038070:CDS | 30.0% | |
| TTCTGCTTCTTCTATATTAC+CGG | + | chr1.2:52746459-52746478 | None:intergenic | 30.0% | |
| TTCTTGGAAGAAGCTATATA+AGG | - | chr1.2:52748739-52748758 | MS.gene038070:CDS | 30.0% | |
| TTTAGAAGCCATTAACAAAC+CGG | + | chr1.2:52748159-52748178 | None:intergenic | 30.0% | |
| TTTGTATGTCAAGGAATTTG+TGG | - | chr1.2:52747230-52747249 | MS.gene038070:CDS | 30.0% | |
| ! | ATCTGCTCAAAAACAGTTTT+TGG | - | chr1.2:52748547-52748566 | MS.gene038070:intron | 30.0% |
| ! | CAAATTCAGAGCAAAAGTTT+TGG | - | chr1.2:52748716-52748735 | MS.gene038070:intron | 30.0% |
| ! | GATTGAATATTTCTGCAGAA+TGG | - | chr1.2:52748786-52748805 | MS.gene038070:CDS | 30.0% |
| ! | GTTTTTCTTCTATATAGTGG+AGG | - | chr1.2:52747789-52747808 | MS.gene038070:CDS | 30.0% |
| !! | AGATTGGTTTCAATAACCAT+AGG | - | chr1.2:52747477-52747496 | MS.gene038070:CDS | 30.0% |
| !! | GATCTAGCTCTTTGTAATTA+CGG | - | chr1.2:52748059-52748078 | MS.gene038070:CDS | 30.0% |
| !! | TGGATTTTTGGATATGCATT+TGG | - | chr1.2:52746556-52746575 | MS.gene038070:CDS | 30.0% |
| !! | TTTTCTTCTATATAGTGGAG+GGG | - | chr1.2:52747791-52747810 | MS.gene038070:CDS | 30.0% |
| !!! | CTCTCTTTTTTTGTATGTCA+AGG | - | chr1.2:52747221-52747240 | MS.gene038070:CDS | 30.0% |
| AAACAGACAGAGCAAATGAA+AGG | + | chr1.2:52747962-52747981 | None:intergenic | 35.0% | |
| AATCTACGTTCTCAAATGGA+CGG | - | chr1.2:52747828-52747847 | MS.gene038070:CDS | 35.0% | |
| ACACTTTGACTAATGTCCTA+TGG | + | chr1.2:52747496-52747515 | None:intergenic | 35.0% | |
| ATAAATGGAATCTCGATCCA+GGG | - | chr1.2:52747736-52747755 | MS.gene038070:CDS | 35.0% | |
| ATCATCTGCACACTCAAAAT+TGG | - | chr1.2:52748301-52748320 | MS.gene038070:CDS | 35.0% | |
| ATCTATTATCAACGCTGCTT+TGG | - | chr1.2:52748577-52748596 | MS.gene038070:intron | 35.0% | |
| ATTTGAGAACGTAGATTAGG+GGG | + | chr1.2:52747825-52747844 | None:intergenic | 35.0% | |
| ATTTGGAAGAATTACTCCCT+GGG | - | chr1.2:52748009-52748028 | MS.gene038070:CDS | 35.0% | |
| CAGTAACCATCCTTTAACAT+TGG | + | chr1.2:52748513-52748532 | None:intergenic | 35.0% | |
| CATTTGAGAACGTAGATTAG+GGG | + | chr1.2:52747826-52747845 | None:intergenic | 35.0% | |
| CCATTTGAGAACGTAGATTA+GGG | + | chr1.2:52747827-52747846 | None:intergenic | 35.0% | |
| GAAATTCAAGAGACAATCTG+AGG | - | chr1.2:52748340-52748359 | MS.gene038070:CDS | 35.0% | |
| GATTATGGGAATGTTTCTTG+CGG | + | chr1.2:52747072-52747091 | None:intergenic | 35.0% | |
| GGAAATGTCTATACATTCTG+TGG | - | chr1.2:52747102-52747121 | MS.gene038070:intron | 35.0% | |
| GGAAGATACGAGTATCAAAA+AGG | - | chr1.2:52746953-52746972 | MS.gene038070:CDS | 35.0% | |
| GTGCAAAACAAGGTAGATTA+CGG | + | chr1.2:52747285-52747304 | None:intergenic | 35.0% | |
| TATTTGGAAGAATTACTCCC+TGG | - | chr1.2:52748008-52748027 | MS.gene038070:CDS | 35.0% | |
| TCCATTTGAGAACGTAGATT+AGG | + | chr1.2:52747828-52747847 | None:intergenic | 35.0% | |
| TCTAAAAGCAAAATCGTTGC+AGG | - | chr1.2:52747147-52747166 | MS.gene038070:intron | 35.0% | |
| TGACATCTAGAAGCAGAATA+CGG | + | chr1.2:52749063-52749082 | None:intergenic | 35.0% | |
| TGCAAAACAAGGTAGATTAC+GGG | + | chr1.2:52747284-52747303 | None:intergenic | 35.0% | |
| TGGAAAACTTGATCACAAGT+TGG | - | chr1.2:52746430-52746449 | MS.gene038070:CDS | 35.0% | |
| TGTTAAAGGATGGTTACTGT+TGG | - | chr1.2:52748514-52748533 | MS.gene038070:intron | 35.0% | |
| TTAGAAGCCATTAACAAACC+GGG | + | chr1.2:52748158-52748177 | None:intergenic | 35.0% | |
| TTCATTTGCTCTGTCTGTTT+CGG | - | chr1.2:52747962-52747981 | MS.gene038070:CDS | 35.0% | |
| TTGTAGAATTAAGGCCTGTT+TGG | - | chr1.2:52746600-52746619 | MS.gene038070:CDS | 35.0% | |
| ! | AACTTGTGATCAAGTTTTCC+AGG | + | chr1.2:52746431-52746450 | None:intergenic | 35.0% |
| ! | GAAAGGTGGTCTAAAATTGA+AGG | + | chr1.2:52747945-52747964 | None:intergenic | 35.0% |
| ! | GTCTTTGAGGGAATAGATAT+AGG | - | chr1.2:52746998-52747017 | MS.gene038070:intron | 35.0% |
| ! | GTTTAGAATACGCTGAACAA+AGG | - | chr1.2:52748432-52748451 | MS.gene038070:intron | 35.0% |
| ! | TGAGATGGTATAGTACTGAA+GGG | + | chr1.2:52748412-52748431 | None:intergenic | 35.0% |
| !! | GAAAGGGCAATTTTGATCTT+AGG | + | chr1.2:52747034-52747053 | None:intergenic | 35.0% |
| !! | TAATCTTGGCCTTTTTCACA+AGG | - | chr1.2:52749485-52749504 | MS.gene038070:CDS | 35.0% |
| !! | TGCTCAAAAACAGTTTTTGG+AGG | - | chr1.2:52748550-52748569 | MS.gene038070:intron | 35.0% |
| !! | TTTGTGTGTGAGTTTTCAAG+TGG | - | chr1.2:52746800-52746819 | MS.gene038070:intron | 35.0% |
| !!! | AGAGCAAAAGTTTTGGTTCT+TGG | - | chr1.2:52748723-52748742 | MS.gene038070:intron | 35.0% |
| !!! | CTTTTAGAGCCTCTTTGTAA+AGG | + | chr1.2:52749308-52749327 | None:intergenic | 35.0% |
| !!! | TAATCTACCTTGTTTTGCAC+TGG | - | chr1.2:52747285-52747304 | MS.gene038070:CDS | 35.0% |
| !!! | TGCAGTCAGAACTTTTTTGA+CGG | - | chr1.2:52749422-52749441 | MS.gene038070:CDS | 35.0% |
| AAGTGCGTCATAAAACTGGA+AGG | - | chr1.2:52748482-52748501 | MS.gene038070:intron | 40.0% | |
| ACAGATTGAATGCTTCTGCT+TGG | - | chr1.2:52749460-52749479 | MS.gene038070:CDS | 40.0% | |
| AGGCGTAATGTATGAAGCAA+AGG | - | chr1.2:52749281-52749300 | MS.gene038070:intron | 40.0% | |
| AGGTAAACAGCTAGAACAGA+AGG | + | chr1.2:52748894-52748913 | None:intergenic | 40.0% | |
| AGGTTTAAAGGTAACCTTGC+TGG | - | chr1.2:52747178-52747197 | MS.gene038070:CDS | 40.0% | |
| AGTGATCATTCTTTCCTACC+TGG | - | chr1.2:52746410-52746429 | MS.gene038070:CDS | 40.0% | |
| CAGCGTATTCTAAACTGAGA+TGG | + | chr1.2:52748427-52748446 | None:intergenic | 40.0% | |
| CAGGCTCTTGAAAGGTTTAA+AGG | - | chr1.2:52747166-52747185 | MS.gene038070:CDS | 40.0% | |
| CATAAATGGAATCTCGATCC+AGG | - | chr1.2:52747735-52747754 | MS.gene038070:CDS | 40.0% | |
| CATGGAATCTTTCACTTCGA+TGG | + | chr1.2:52748040-52748059 | None:intergenic | 40.0% | |
| CATTCAGCACCAAAGTTATC+AGG | + | chr1.2:52747609-52747628 | None:intergenic | 40.0% | |
| CCCTAATCTACGTTCTCAAA+TGG | - | chr1.2:52747824-52747843 | MS.gene038070:CDS | 40.0% | |
| GAAGGTGGTTCCAATGTTAA+AGG | - | chr1.2:52748500-52748519 | MS.gene038070:intron | 40.0% | |
| GAATTATCTCTGCGAGAAAG+TGG | - | chr1.2:52746476-52746495 | MS.gene038070:CDS | 40.0% | |
| GCTTCTGCTTGGTATAATCT+TGG | - | chr1.2:52749471-52749490 | MS.gene038070:CDS | 40.0% | |
| GGAACTTGGAAGTGGAAATA+TGG | - | chr1.2:52748956-52748975 | MS.gene038070:CDS | 40.0% | |
| GGCGTAATGTATGAAGCAAA+GGG | - | chr1.2:52749282-52749301 | MS.gene038070:intron | 40.0% | |
| GGCGTGTCTTTCAAAATCTA+AGG | - | chr1.2:52749029-52749048 | MS.gene038070:intron | 40.0% | |
| GTGGTTCCAATGTTAAAGGA+TGG | - | chr1.2:52748504-52748523 | MS.gene038070:intron | 40.0% | |
| TAAGACAAAGTAGCTTCACG+AGG | + | chr1.2:52747699-52747718 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTGTTTC+GGG | - | chr1.2:52747963-52747982 | MS.gene038070:CDS | 40.0% | |
| TGCAAAGTGCGTCATAAAAC+TGG | - | chr1.2:52748478-52748497 | MS.gene038070:intron | 40.0% | |
| TTCCCATAATCATGGTGAAC+CGG | - | chr1.2:52747081-52747100 | MS.gene038070:intron | 40.0% | |
| TTCCGGTTCACCATGATTAT+GGG | + | chr1.2:52747086-52747105 | None:intergenic | 40.0% | |
| TTGTAATTACGGAGCAGGTA+AGG | - | chr1.2:52748070-52748089 | MS.gene038070:CDS | 40.0% | |
| TTTCCGGTTCACCATGATTA+TGG | + | chr1.2:52747087-52747106 | None:intergenic | 40.0% | |
| TTTGGATCAGACTGGGAAAT+GGG | - | chr1.2:52748595-52748614 | MS.gene038070:intron | 40.0% | |
| ! | CGAAGCTACAGAATGTTTTC+AGG | - | chr1.2:52749533-52749552 | MS.gene038070:CDS | 40.0% |
| ! | CTGAGATGGTATAGTACTGA+AGG | + | chr1.2:52748413-52748432 | None:intergenic | 40.0% |
| ! | GATGCTTTAGACATTGATCC+TGG | - | chr1.2:52749336-52749355 | MS.gene038070:intron | 40.0% |
| ! | GTCAAAAAAGTTCTGACTGC+AGG | + | chr1.2:52749423-52749442 | None:intergenic | 40.0% |
| ! | GTGAAGCTACTTTGTCTTAC+CGG | - | chr1.2:52747700-52747719 | MS.gene038070:CDS | 40.0% |
| ! | TGGTGCTGAATGTAAATTGC+AGG | - | chr1.2:52747617-52747636 | MS.gene038070:CDS | 40.0% |
| ! | TGTGATCAAGTTTTCCAGGT+AGG | + | chr1.2:52746427-52746446 | None:intergenic | 40.0% |
| ! | TTGTGGTTTTTCGCTGCATA+TGG | - | chr1.2:52747247-52747266 | MS.gene038070:CDS | 40.0% |
| !! | ATTTATGAAGAAGTGCTCGC+CGG | + | chr1.2:52747722-52747741 | None:intergenic | 40.0% |
| !! | GCGTTCTTTGTTTCTGGAAA+GGG | + | chr1.2:52747050-52747069 | None:intergenic | 40.0% |
| !! | TTTTGGGTACATAGACGGAA+TGG | + | chr1.2:52746832-52746851 | None:intergenic | 40.0% |
| !!! | CTTTTTTGACGGATGCTCTA+CGG | - | chr1.2:52749433-52749452 | MS.gene038070:CDS | 40.0% |
| AAGCTGAGTGTACGTCTCAA+TGG | + | chr1.2:52748684-52748703 | None:intergenic | 45.0% | |
| AAGGATGGTTACTGTTGGCA+CGG | - | chr1.2:52748519-52748538 | MS.gene038070:intron | 45.0% | |
| AAGTGGCGTGTTAAACTACG+AGG | - | chr1.2:52746493-52746512 | MS.gene038070:CDS | 45.0% | |
| AAGTTATCAGGCAAGCCTTC+AGG | + | chr1.2:52747597-52747616 | None:intergenic | 45.0% | |
| AATCGTTGCAGGCTCTTGAA+AGG | - | chr1.2:52747158-52747177 | MS.gene038070:intron | 45.0% | |
| ACTTCCTGAAAAGAAGTCCC+TGG | + | chr1.2:52746393-52746412 | None:intergenic | 45.0% | |
| AGCAAAGGGCCTTTACAAAG+AGG | - | chr1.2:52749296-52749315 | MS.gene038070:intron | 45.0% | |
| AGCTGCATTACACGTCTTTG+AGG | - | chr1.2:52746985-52747004 | MS.gene038070:intron | 45.0% | |
| AGTCTCACCAGTGCAAAACA+AGG | + | chr1.2:52747295-52747314 | None:intergenic | 45.0% | |
| ATCCGAATCTCTTGTCACCA+GGG | - | chr1.2:52746373-52746392 | MS.gene038070:CDS | 45.0% | |
| CAGACAGAGCAAATGAAAGG+TGG | + | chr1.2:52747959-52747978 | None:intergenic | 45.0% | |
| CTCGGTTACCCTATCACAAA+TGG | + | chr1.2:52748927-52748946 | None:intergenic | 45.0% | |
| CTTTGGATCAGACTGGGAAA+TGG | - | chr1.2:52748594-52748613 | MS.gene038070:intron | 45.0% | |
| GAAGGCTTGCCTGATAACTT+TGG | - | chr1.2:52747597-52747616 | MS.gene038070:CDS | 45.0% | |
| GCTCTTTGTAATTACGGAGC+AGG | - | chr1.2:52748065-52748084 | MS.gene038070:CDS | 45.0% | |
| GCTGCATTACACGTCTTTGA+GGG | - | chr1.2:52746986-52747005 | MS.gene038070:intron | 45.0% | |
| GCTTCTAGATGTCATGCACT+CGG | - | chr1.2:52749069-52749088 | MS.gene038070:intron | 45.0% | |
| GGCGAGCACTTCTTCATAAA+TGG | - | chr1.2:52747721-52747740 | MS.gene038070:CDS | 45.0% | |
| GTACTTCAGCAGTGGAGATT+AGG | + | chr1.2:52749374-52749393 | None:intergenic | 45.0% | |
| GTGACAAGAGATTCGGATGA+AGG | + | chr1.2:52746371-52746390 | None:intergenic | 45.0% | |
| GTGGAATCTTCATTGCCTGA+AGG | - | chr1.2:52747579-52747598 | MS.gene038070:CDS | 45.0% | |
| GTTGAGTGATAGAGAAAGGC+CGG | - | chr1.2:52748124-52748143 | MS.gene038070:CDS | 45.0% | |
| TACTGAAGGGTCTCTCATTC+CGG | + | chr1.2:52748399-52748418 | None:intergenic | 45.0% | |
| TCAGCAAGCTTCCACAATTC+TGG | + | chr1.2:52747672-52747691 | None:intergenic | 45.0% | |
| TCCGGCAAACAACATAGAAG+AGG | - | chr1.2:52747860-52747879 | MS.gene038070:CDS | 45.0% | |
| TGAATCTTTGCTACAGTCCC+TGG | + | chr1.2:52747756-52747775 | None:intergenic | 45.0% | |
| TGCGTCATAAAACTGGAAGG+TGG | - | chr1.2:52748485-52748504 | MS.gene038070:intron | 45.0% | |
| TGTACATCAGTCTTTCCCAG+TGG | - | chr1.2:52748995-52749014 | MS.gene038070:intron | 45.0% | |
| TTGAGCTGCTTCCAGAATTG+TGG | - | chr1.2:52747658-52747677 | MS.gene038070:CDS | 45.0% | |
| ! | AGGTAAGGACTTGATGGCAA+TGG | - | chr1.2:52748085-52748104 | MS.gene038070:CDS | 45.0% |
| ! | CAGGAAGCTAGAGCATTACT+AGG | - | chr1.2:52746932-52746951 | MS.gene038070:CDS | 45.0% |
| ! | CTTGATCACAAGTTGGACAC+CGG | - | chr1.2:52746437-52746456 | MS.gene038070:CDS | 45.0% |
| ! | GCCTCTTCTATGTTGTTTGC+CGG | + | chr1.2:52747864-52747883 | None:intergenic | 45.0% |
| ! | TACCCTCAGCCTTGTGAAAA+AGG | + | chr1.2:52749497-52749516 | None:intergenic | 45.0% |
| ! | TTTGCACTGGTGAGACTGTT+TGG | - | chr1.2:52747298-52747317 | MS.gene038070:CDS | 45.0% |
| !! | AACCCTAGTCTTGCAGAAGA+AGG | - | chr1.2:52748191-52748210 | MS.gene038070:CDS | 45.0% |
| !! | ACACGTTCCCGGTTTGTTAA+TGG | - | chr1.2:52748148-52748167 | MS.gene038070:CDS | 45.0% |
| !! | ACCCTAGTCTTGCAGAAGAA+GGG | - | chr1.2:52748192-52748211 | MS.gene038070:CDS | 45.0% |
| !! | GGCGTTCTTTGTTTCTGGAA+AGG | + | chr1.2:52747051-52747070 | None:intergenic | 45.0% |
| !!! | AATAGTTTTTTTTTTTTTTT+GGG | + | chr1.2:52746848-52746867 | None:intergenic | 5.0% |
| AACAAACCGGGAACGTGTTC+CGG | + | chr1.2:52748146-52748165 | None:intergenic | 50.0% | |
| AATGGACGGCTCGTTTGTTC+CGG | - | chr1.2:52747842-52747861 | MS.gene038070:CDS | 50.0% | |
| ACCCCTTCTTCTGCAAGACT+AGG | + | chr1.2:52748197-52748216 | None:intergenic | 50.0% | |
| CACTTCGATGGATAGTCCCA+GGG | + | chr1.2:52748028-52748047 | None:intergenic | 50.0% | |
| CAGACTGGGAAATGGGATCA+GGG | - | chr1.2:52748602-52748621 | MS.gene038070:intron | 50.0% | |
| CATCCGAATCTCTTGTCACC+AGG | - | chr1.2:52746372-52746391 | MS.gene038070:CDS | 50.0% | |
| CCAAGTTCCTAGCACGATCT+CGG | + | chr1.2:52748945-52748964 | None:intergenic | 50.0% | |
| CCCCTTCTTCTGCAAGACTA+GGG | + | chr1.2:52748196-52748215 | None:intergenic | 50.0% | |
| CTTCAAGCCTTGGAAACTGC+TGG | - | chr1.2:52748365-52748384 | MS.gene038070:intron | 50.0% | |
| GCGTCTAAGTACTTCAGCAG+TGG | + | chr1.2:52749382-52749401 | None:intergenic | 50.0% | |
| GTCCCTGGTGACAAGAGATT+CGG | + | chr1.2:52746378-52746397 | None:intergenic | 50.0% | |
| TCACTTCGATGGATAGTCCC+AGG | + | chr1.2:52748029-52748048 | None:intergenic | 50.0% | |
| TCAGACTGGGAAATGGGATC+AGG | - | chr1.2:52748601-52748620 | MS.gene038070:intron | 50.0% | |
| TCGTGCTAGGAACTTGGAAG+TGG | - | chr1.2:52748948-52748967 | MS.gene038070:CDS | 50.0% | |
| ! | AACGCTGCTTTGGATCAGAC+TGG | - | chr1.2:52748587-52748606 | MS.gene038070:intron | 50.0% |
| ! | ACGCTGCTTTGGATCAGACT+GGG | - | chr1.2:52748588-52748607 | MS.gene038070:intron | 50.0% |
| ! | AGAGCACTTGAGAGCTTGGA+CGG | - | chr1.2:52748230-52748249 | MS.gene038070:CDS | 50.0% |
| ! | ATCTGAGGCACTTCAAGCCT+TGG | - | chr1.2:52748355-52748374 | MS.gene038070:CDS | 50.0% |
| ! | CTTGCGGCGTTCTTTGTTTC+TGG | + | chr1.2:52747056-52747075 | None:intergenic | 50.0% |
| ! | GTCACCAGGGACTTCTTTTC+AGG | - | chr1.2:52746386-52746405 | MS.gene038070:CDS | 50.0% |
| !! | CCCTAGTCTTGCAGAAGAAG+GGG | - | chr1.2:52748193-52748212 | MS.gene038070:CDS | 50.0% |
| !! | GGCCTTTTTCACAAGGCTGA+GGG | - | chr1.2:52749492-52749511 | MS.gene038070:CDS | 50.0% |
| !! | TCAGAGAGCACTTGAGAGCT+TGG | - | chr1.2:52748226-52748245 | MS.gene038070:CDS | 50.0% |
| !! | TGGCCTTTTTCACAAGGCTG+AGG | - | chr1.2:52749491-52749510 | MS.gene038070:CDS | 50.0% |
| AGGGTAACCGAGATCGTGCT+AGG | - | chr1.2:52748935-52748954 | MS.gene038070:CDS | 55.0% | |
| ATTGCAGGAGACCGTGAGCA+AGG | - | chr1.2:52747632-52747651 | MS.gene038070:CDS | 55.0% | |
| CAGCAGTGGAGATTAGGCTG+CGG | + | chr1.2:52749368-52749387 | None:intergenic | 55.0% | |
| CAGCTCAACTGCCTTGCTCA+CGG | + | chr1.2:52747646-52747665 | None:intergenic | 55.0% | |
| CCGAGATCGTGCTAGGAACT+TGG | - | chr1.2:52748942-52748961 | MS.gene038070:CDS | 55.0% | |
| CGGAGCAGGTAAGGACTTGA+TGG | - | chr1.2:52748079-52748098 | MS.gene038070:CDS | 55.0% | |
| CGTTCTGCCAGCAGTTTCCA+AGG | + | chr1.2:52748375-52748394 | None:intergenic | 55.0% | |
| CTACGCTCAGGGGAGCAATT+GGG | - | chr1.2:52746326-52746345 | MS.gene038070:CDS | 55.0% | |
| GAAACTGCTGGCAGAACGAC+CGG | - | chr1.2:52748377-52748396 | MS.gene038070:intron | 55.0% | |
| TGGAGATTAGGCTGCGGACA+TGG | + | chr1.2:52749362-52749381 | None:intergenic | 55.0% | |
| TTCCCAGTGGCATGATGCAG+AGG | - | chr1.2:52749008-52749027 | MS.gene038070:intron | 55.0% | |
| ACGCCTCTGCATCATGCCAC+TGG | + | chr1.2:52749014-52749033 | None:intergenic | 60.0% | |
| ATTAGGCTGCGGACATGGCC+AGG | + | chr1.2:52749357-52749376 | None:intergenic | 60.0% | |
| CCAATTGCTCCCCTGAGCGT+AGG | + | chr1.2:52746328-52746347 | None:intergenic | 60.0% | |
| CCTACGCTCAGGGGAGCAAT+TGG | - | chr1.2:52746325-52746344 | MS.gene038070:CDS | 60.0% | |
| CGCCTCTGCATCATGCCACT+GGG | + | chr1.2:52749013-52749032 | None:intergenic | 60.0% | |
| GAAAGGCCGGAACACGTTCC+CGG | - | chr1.2:52748137-52748156 | MS.gene038070:CDS | 60.0% | |
| CGCTCAGGGGAGCAATTGGG+AGG | - | chr1.2:52746329-52746348 | MS.gene038070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 52746317 | 52749602 | 52746317 | ID=MS.gene038070 |
| chr1.2 | mRNA | 52746317 | 52749602 | 52746317 | ID=MS.gene038070.t1;Parent=MS.gene038070 |
| chr1.2 | exon | 52749405 | 52749602 | 52749405 | ID=MS.gene038070.t1.exon1;Parent=MS.gene038070.t1 |
| chr1.2 | CDS | 52749405 | 52749602 | 52749405 | ID=cds.MS.gene038070.t1;Parent=MS.gene038070.t1 |
| chr1.2 | exon | 52748732 | 52748984 | 52748732 | ID=MS.gene038070.t1.exon2;Parent=MS.gene038070.t1 |
| chr1.2 | CDS | 52748732 | 52748984 | 52748732 | ID=cds.MS.gene038070.t1;Parent=MS.gene038070.t1 |
| chr1.2 | exon | 52747159 | 52748375 | 52747159 | ID=MS.gene038070.t1.exon3;Parent=MS.gene038070.t1 |
| chr1.2 | CDS | 52747159 | 52748375 | 52747159 | ID=cds.MS.gene038070.t1;Parent=MS.gene038070.t1 |
| chr1.2 | exon | 52746829 | 52746982 | 52746829 | ID=MS.gene038070.t1.exon4;Parent=MS.gene038070.t1 |
| chr1.2 | CDS | 52746829 | 52746982 | 52746829 | ID=cds.MS.gene038070.t1;Parent=MS.gene038070.t1 |
| chr1.2 | exon | 52746317 | 52746636 | 52746317 | ID=MS.gene038070.t1.exon5;Parent=MS.gene038070.t1 |
| chr1.2 | CDS | 52746317 | 52746636 | 52746317 | ID=cds.MS.gene038070.t1;Parent=MS.gene038070.t1 |
| Gene Sequence |
| Protein sequence |
