Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89567.t1 | XP_013468448.1 | 96.9 | 713 | 22 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1329.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89567.t1 | Q66GN3 | 57.9 | 719 | 293 | 3 | 1 | 713 | 25 | 739 | 9.1e-226 | 784.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89567.t1 | A0A072VWM1 | 96.9 | 713 | 22 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1329.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene89567 | 0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene89567 | 0.82722 | 1.76E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene89567 | 0.839534 | 1.50E-57 | -1.69E-46 |
| MS.gene050657 | MS.gene89567 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene89567 | 0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene89567 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene89567 | 0.804642 | 1.96E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene89567 | 0.82724 | 1.74E-54 | -1.69E-46 |
| MS.gene052020 | MS.gene89567 | 0.820937 | 5.27E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene89567 | 0.814064 | 1.86E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene89567 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene89567 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene89567 | 0.80686 | 6.70E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene89567 | 0.802141 | 6.46E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene89567 | 0.825465 | 4.62E-54 | -1.69E-46 |
| MS.gene055466 | MS.gene89567 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene89567 | 0.806658 | 7.39E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene89567 | 0.82115 | 4.71E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene89567 | 0.80604 | 9.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66459 | MS.gene89567 | PPI |
| MS.gene89567 | MS.gene051693 | PPI |
| MS.gene24475 | MS.gene89567 | PPI |
| MS.gene89567 | MS.gene00502 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89567.t1 | MTR_1g069630 | 96.634 | 713 | 24 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1425 |
| MS.gene89567.t1 | MTR_7g097230 | 68.436 | 716 | 220 | 3 | 1 | 713 | 16 | 728 | 0.0 | 980 |
| MS.gene89567.t1 | MTR_1g075480 | 57.719 | 719 | 290 | 7 | 1 | 713 | 22 | 732 | 0.0 | 786 |
| MS.gene89567.t1 | MTR_1g075480 | 57.719 | 719 | 290 | 7 | 1 | 713 | 35 | 745 | 0.0 | 786 |
| MS.gene89567.t1 | MTR_1g075480 | 58.051 | 708 | 281 | 7 | 15 | 713 | 48 | 748 | 0.0 | 781 |
| MS.gene89567.t1 | MTR_7g097230 | 67.084 | 559 | 181 | 2 | 1 | 556 | 16 | 574 | 0.0 | 744 |
| MS.gene89567.t1 | MTR_1g075480 | 58.333 | 600 | 239 | 4 | 15 | 609 | 35 | 628 | 0.0 | 672 |
| MS.gene89567.t1 | MTR_5g026810 | 47.774 | 674 | 344 | 5 | 40 | 712 | 26 | 692 | 0.0 | 588 |
| MS.gene89567.t1 | MTR_8g071330 | 45.175 | 684 | 368 | 4 | 29 | 712 | 9 | 685 | 0.0 | 575 |
| MS.gene89567.t1 | MTR_1g018040 | 44.028 | 720 | 381 | 12 | 6 | 712 | 6 | 716 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89567.t1 | AT4G28600 | 58.693 | 719 | 287 | 3 | 1 | 713 | 25 | 739 | 0.0 | 799 |
| MS.gene89567.t1 | AT4G28600 | 58.693 | 719 | 287 | 3 | 1 | 713 | 25 | 739 | 0.0 | 799 |
| MS.gene89567.t1 | AT4G28600 | 58.287 | 724 | 287 | 4 | 1 | 713 | 25 | 744 | 0.0 | 793 |
| MS.gene89567.t1 | AT2G43040 | 47.633 | 676 | 344 | 5 | 40 | 712 | 32 | 700 | 0.0 | 569 |
| MS.gene89567.t1 | AT2G43040 | 47.633 | 676 | 344 | 5 | 40 | 712 | 32 | 700 | 0.0 | 569 |
| MS.gene89567.t1 | AT1G27460 | 41.399 | 715 | 380 | 10 | 6 | 712 | 6 | 689 | 1.11e-164 | 490 |
| MS.gene89567.t1 | AT1G27460 | 41.818 | 715 | 381 | 10 | 6 | 712 | 6 | 693 | 1.27e-164 | 490 |
| MS.gene89567.t1 | AT1G27460 | 42.545 | 550 | 292 | 8 | 6 | 547 | 6 | 539 | 1.12e-126 | 387 |
Find 159 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCGGCGTTCTTTGTTTC+TGG | 0.051091 | 1.1:+51400325 | None:intergenic |
| TTTCCGGTTCACCATGATTA+TGG | 0.184771 | 1.1:+51400294 | None:intergenic |
| TTCATTTGCTCTGTCTGTTT+CGG | 0.188123 | 1.1:-51399416 | MS.gene89567:CDS |
| TCATTTGCTCTGTCTGTTTC+GGG | 0.193859 | 1.1:-51399415 | MS.gene89567:CDS |
| ATCGAGTTTAGCCAATTATT+TGG | 0.205375 | 1.1:-51399386 | MS.gene89567:CDS |
| TACCCTCAGCCTTGTGAAAA+AGG | 0.205859 | 1.1:+51397903 | None:intergenic |
| CAGGCTCTTGAAAGGTTTAA+AGG | 0.236026 | 1.1:-51400212 | MS.gene89567:intron |
| ATCATCTGCACACTCAAAAT+TGG | 0.251662 | 1.1:-51399077 | MS.gene89567:CDS |
| CCAATCTTGCAAAGTTATTA+TGG | 0.251753 | 1.1:-51399827 | MS.gene89567:CDS |
| CATTCAGCACCAAAGTTATC+AGG | 0.259185 | 1.1:+51399772 | None:intergenic |
| ACACGTTCCCGGTTTGTTAA+TGG | 0.260326 | 1.1:-51399230 | MS.gene89567:CDS |
| GGCGAGCACTTCTTCATAAA+TGG | 0.260430 | 1.1:-51399657 | MS.gene89567:CDS |
| GAGTAATTCTTCCAAATAAT+TGG | 0.272977 | 1.1:+51399375 | None:intergenic |
| CCATAATAACTTTGCAAGAT+TGG | 0.280709 | 1.1:+51399827 | None:intergenic |
| CCATTTGAGAACGTAGATTA+GGG | 0.289798 | 1.1:+51399554 | None:intergenic |
| TTCTGCTTCTTCTATATTAC+CGG | 0.290062 | 1.1:+51400920 | None:intergenic |
| TCAGCAAGCTTCCACAATTC+TGG | 0.299846 | 1.1:+51399709 | None:intergenic |
| GCCTCTTCTATGTTGTTTGC+CGG | 0.304221 | 1.1:+51399517 | None:intergenic |
| CAAATTCAGAGCAAAAGTTT+TGG | 0.314010 | 1.1:-51398662 | MS.gene89567:CDS |
| TGCAAAGTGCGTCATAAAAC+TGG | 0.329264 | 1.1:-51398900 | MS.gene89567:CDS |
| AACAAACCGGGAACGTGTTC+CGG | 0.330656 | 1.1:+51399235 | None:intergenic |
| TTCCGGTTCACCATGATTAT+GGG | 0.345463 | 1.1:+51400295 | None:intergenic |
| TTCTTGGAAGAAGCTATATA+AGG | 0.353884 | 1.1:-51398639 | MS.gene89567:intron |
| GATCTAGCTCTTTGTAATTA+CGG | 0.355641 | 1.1:-51399319 | MS.gene89567:CDS |
| GAAAGGCCGGAACACGTTCC+CGG | 0.359395 | 1.1:-51399241 | MS.gene89567:CDS |
| TCTAAAAGCAAAATCGTTGC+AGG | 0.362819 | 1.1:-51400231 | MS.gene89567:CDS |
| GGAAGATACGAGTATCAAAA+AGG | 0.369028 | 1.1:-51400425 | MS.gene89567:CDS |
| TACTGAAGGGTCTCTCATTC+CGG | 0.371242 | 1.1:+51398982 | None:intergenic |
| AATGGACGGCTCGTTTGTTC+CGG | 0.372709 | 1.1:-51399536 | MS.gene89567:CDS |
| CATAATAACTTTGCAAGATT+GGG | 0.372836 | 1.1:+51399828 | None:intergenic |
| GGAACTTGGAAGTGGAAATA+TGG | 0.379485 | 1.1:-51398422 | MS.gene89567:CDS |
| TGAATCTTTGCTACAGTCCC+TGG | 0.383146 | 1.1:+51399625 | None:intergenic |
| GAAGGTGGTTCCAATGTTAA+AGG | 0.388143 | 1.1:-51398878 | MS.gene89567:CDS |
| GTGAAGCTACTTTGTCTTAC+CGG | 0.388356 | 1.1:-51399678 | MS.gene89567:CDS |
| AATGTTGCAAAATTCTATCT+TGG | 0.388770 | 1.1:-51399106 | MS.gene89567:CDS |
| CTTTGGATCAGACTGGGAAA+TGG | 0.392510 | 1.1:-51398784 | MS.gene89567:CDS |
| TCAGAGAGCACTTGAGAGCT+TGG | 0.397172 | 1.1:-51399152 | MS.gene89567:CDS |
| GCGTTCTTTGTTTCTGGAAA+GGG | 0.399083 | 1.1:+51400331 | None:intergenic |
| ATCTATTATCAACGCTGCTT+TGG | 0.399909 | 1.1:-51398801 | MS.gene89567:CDS |
| TCAGACTGGGAAATGGGATC+AGG | 0.402096 | 1.1:-51398777 | MS.gene89567:CDS |
| GCTTCTGCTTGGTATAATCT+TGG | 0.405820 | 1.1:-51397926 | MS.gene89567:CDS |
| CCTACGCTCAGGGGAGCAAT+TGG | 0.409024 | 1.1:-51401051 | MS.gene89567:CDS |
| AAGTTATCAGGCAAGCCTTC+AGG | 0.409413 | 1.1:+51399784 | None:intergenic |
| ACAGAATGTATAGACATTTC+CGG | 0.415399 | 1.1:+51400278 | None:intergenic |
| TCCATTTGAGAACGTAGATT+AGG | 0.418331 | 1.1:+51399553 | None:intergenic |
| CCGAGATCGTGCTAGGAACT+TGG | 0.420476 | 1.1:-51398436 | MS.gene89567:CDS |
| TTTAGAAGCCATTAACAAAC+CGG | 0.423076 | 1.1:+51399222 | None:intergenic |
| TGGTGCTGAATGTAAATTGC+AGG | 0.428911 | 1.1:-51399761 | MS.gene89567:CDS |
| ATCTGAGGCACTTCAAGCCT+TGG | 0.438993 | 1.1:-51399023 | MS.gene89567:CDS |
| TCTCTCTCAATAGAATTGAA+TGG | 0.439125 | 1.1:-51399462 | MS.gene89567:CDS |
| GAATTTCTCGAAATCAGAAA+TGG | 0.439970 | 1.1:+51399054 | None:intergenic |
| GTACTTCAGCAGTGGAGATT+AGG | 0.444856 | 1.1:+51398026 | None:intergenic |
| CATGGAATCTTTCACTTCGA+TGG | 0.444879 | 1.1:+51399341 | None:intergenic |
| ACCCCTTCTTCTGCAAGACT+AGG | 0.448007 | 1.1:+51399184 | None:intergenic |
| TTCCCATAATCATGGTGAAC+CGG | 0.454699 | 1.1:-51400297 | MS.gene89567:CDS |
| TTTGGATCAGACTGGGAAAT+GGG | 0.455022 | 1.1:-51398783 | MS.gene89567:CDS |
| CTCTCTCAATAGAATTGAAT+GGG | 0.455430 | 1.1:-51399461 | MS.gene89567:CDS |
| GGCGTTCTTTGTTTCTGGAA+AGG | 0.457269 | 1.1:+51400330 | None:intergenic |
| GGCGTGTCTTTCAAAATCTA+AGG | 0.457296 | 1.1:-51398349 | MS.gene89567:CDS |
| CCCCTTCTTCTGCAAGACTA+GGG | 0.461370 | 1.1:+51399185 | None:intergenic |
| CGGAGCAGGTAAGGACTTGA+TGG | 0.465727 | 1.1:-51399299 | MS.gene89567:CDS |
| CCCTAATCTACGTTCTCAAA+TGG | 0.465907 | 1.1:-51399554 | MS.gene89567:CDS |
| ATTAGGCTGCGGACATGGCC+AGG | 0.467685 | 1.1:+51398043 | None:intergenic |
| CAAAGTTATTATGGACATAG+TGG | 0.467812 | 1.1:-51399818 | MS.gene89567:CDS |
| ACGCCTCTGCATCATGCCAC+TGG | 0.468078 | 1.1:+51398367 | None:intergenic |
| GAAGGCTTGCCTGATAACTT+TGG | 0.468639 | 1.1:-51399781 | MS.gene89567:CDS |
| CATAAATGGAATCTCGATCC+AGG | 0.473610 | 1.1:-51399643 | MS.gene89567:CDS |
| CTACGCTCAGGGGAGCAATT+GGG | 0.477613 | 1.1:-51401050 | MS.gene89567:CDS |
| ACAATGAAGTTCCTACGCTC+AGG | 0.478204 | 1.1:-51401062 | MS.gene89567:CDS |
| CAGTAACCATCCTTTAACAT+TGG | 0.480051 | 1.1:+51398868 | None:intergenic |
| GTCTTTGAGGGAATAGATAT+AGG | 0.481239 | 1.1:-51400380 | MS.gene89567:CDS |
| AACCCTAGTCTTGCAGAAGA+AGG | 0.483388 | 1.1:-51399187 | MS.gene89567:CDS |
| CAGGAAGCTAGAGCATTACT+AGG | 0.486649 | 1.1:-51400446 | MS.gene89567:CDS |
| CGTTCTGCCAGCAGTTTCCA+AGG | 0.488431 | 1.1:+51399006 | None:intergenic |
| TGAGGGTAAAATATCATCAT+TGG | 0.491744 | 1.1:-51397888 | MS.gene89567:CDS |
| TATTTGGAAGAATTACTCCC+TGG | 0.494270 | 1.1:-51399370 | MS.gene89567:CDS |
| GAAACTGCTGGCAGAACGAC+CGG | 0.498236 | 1.1:-51399001 | MS.gene89567:CDS |
| GCTCTTTGTAATTACGGAGC+AGG | 0.499405 | 1.1:-51399313 | MS.gene89567:CDS |
| GATGCTTTAGACATTGATCC+TGG | 0.500078 | 1.1:-51398061 | MS.gene89567:CDS |
| TTGTAATTACGGAGCAGGTA+AGG | 0.501729 | 1.1:-51399308 | MS.gene89567:CDS |
| TCACTTCGATGGATAGTCCC+AGG | 0.503053 | 1.1:+51399352 | None:intergenic |
| AGCTGCATTACACGTCTTTG+AGG | 0.505490 | 1.1:-51400393 | MS.gene89567:CDS |
| CATCTGAATCTCTTGTCACC+AGG | 0.508204 | 1.1:-51401004 | MS.gene89567:CDS |
| AATCGTTGCAGGCTCTTGAA+AGG | 0.510742 | 1.1:-51400220 | MS.gene89567:CDS |
| TTGAGCTGCTTCCAGAATTG+TGG | 0.513561 | 1.1:-51399720 | MS.gene89567:CDS |
| CGCCTCTGCATCATGCCACT+GGG | 0.513605 | 1.1:+51398368 | None:intergenic |
| AACGCTGCTTTGGATCAGAC+TGG | 0.514212 | 1.1:-51398791 | MS.gene89567:CDS |
| AATTACAAAGAGCTAGATCA+TGG | 0.514312 | 1.1:+51399323 | None:intergenic |
| GCTGCATTACACGTCTTTGA+GGG | 0.518869 | 1.1:-51400392 | MS.gene89567:CDS |
| CTGAGATGGTATAGTACTGA+AGG | 0.523029 | 1.1:+51398968 | None:intergenic |
| ATTTGGAAGAATTACTCCCT+GGG | 0.525471 | 1.1:-51399369 | MS.gene89567:CDS |
| GAATTATCTCTGCGAGAAAG+TGG | 0.528266 | 1.1:-51400900 | MS.gene89567:CDS |
| TGGAGATTAGGCTGCGGACA+TGG | 0.529432 | 1.1:+51398038 | None:intergenic |
| AAGAAACATTCCCATAATCA+TGG | 0.530663 | 1.1:-51400305 | MS.gene89567:CDS |
| AAGCTGAGTGTACGTCTCAA+TGG | 0.530685 | 1.1:+51398697 | None:intergenic |
| CTTCAAGCCTTGGAAACTGC+TGG | 0.530954 | 1.1:-51399013 | MS.gene89567:CDS |
| ACCCTAGTCTTGCAGAAGAA+GGG | 0.531321 | 1.1:-51399186 | MS.gene89567:CDS |
| CCAAGTTCCTAGCACGATCT+CGG | 0.533706 | 1.1:+51398436 | None:intergenic |
| GAAAGGTGGTCTAAAATTGA+AGG | 0.534995 | 1.1:+51399436 | None:intergenic |
| GGAAATGTCTATACATTCTG+TGG | 0.537831 | 1.1:-51400276 | MS.gene89567:CDS |
| AATTGTTGAGTGATAGAGAA+AGG | 0.538244 | 1.1:-51399258 | MS.gene89567:CDS |
| AGGCGTAATGTATGAAGCAA+AGG | 0.544212 | 1.1:-51398116 | MS.gene89567:CDS |
| GTGACAAGAGATTCAGATGA+AGG | 0.544244 | 1.1:+51401008 | None:intergenic |
| AGAGCACTTGAGAGCTTGGA+CGG | 0.546004 | 1.1:-51399148 | MS.gene89567:CDS |
| AAGTGGCGTGTTAAACTATG+AGG | 0.546283 | 1.1:-51400883 | MS.gene89567:intron |
| TCGTGCTAGGAACTTGGAAG+TGG | 0.547148 | 1.1:-51398430 | MS.gene89567:CDS |
| AGTGATCATTCTTTCCTACC+TGG | 0.549462 | 1.1:-51400966 | MS.gene89567:CDS |
| GGCGTAATGTATGAAGCAAA+GGG | 0.550921 | 1.1:-51398115 | MS.gene89567:CDS |
| AATAATTGGCTAAACTCGAT+AGG | 0.551034 | 1.1:+51399389 | None:intergenic |
| TATAGAATATGTCATCTGAA+AGG | 0.552996 | 1.1:+51397806 | None:intergenic |
| CAATGAAGTTCCTACGCTCA+GGG | 0.553279 | 1.1:-51401061 | MS.gene89567:CDS |
| GCTAAAGTTCAAATTGCACT+TGG | 0.553493 | 1.1:-51398734 | MS.gene89567:CDS |
| TGACATCTAGAAGCAGAATA+CGG | 0.557828 | 1.1:+51398318 | None:intergenic |
| ACAGATTGAATGCTTCTGCT+TGG | 0.559962 | 1.1:-51397937 | MS.gene89567:CDS |
| CAGACTGGGAAATGGGATCA+GGG | 0.561941 | 1.1:-51398776 | MS.gene89567:CDS |
| GTTGAGTGATAGAGAAAGGC+CGG | 0.563279 | 1.1:-51399254 | MS.gene89567:CDS |
| CCCTAGTCTTGCAGAAGAAG+GGG | 0.568534 | 1.1:-51399185 | MS.gene89567:CDS |
| GTGGTTCCAATGTTAAAGGA+TGG | 0.575049 | 1.1:-51398874 | MS.gene89567:CDS |
| TTCCCAGTGGCATGATGCAG+AGG | 0.575200 | 1.1:-51398370 | MS.gene89567:CDS |
| CACTTCGATGGATAGTCCCA+GGG | 0.576038 | 1.1:+51399353 | None:intergenic |
| TGGAAAACTTGATCACAAGT+TGG | 0.577745 | 1.1:-51400946 | MS.gene89567:CDS |
| AGGGTAACCGAGATCGTGCT+AGG | 0.578066 | 1.1:-51398443 | MS.gene89567:CDS |
| ACTTCCTGAAAAGAAGTCCC+TGG | 0.578708 | 1.1:+51400986 | None:intergenic |
| CAGCGTATTCTAAACTGAGA+TGG | 0.582160 | 1.1:+51398954 | None:intergenic |
| AAGGATGGTTACTGTTGGCA+CGG | 0.592491 | 1.1:-51398859 | MS.gene89567:CDS |
| CAGCTCAACTGCCTTGCTCA+CGG | 0.599337 | 1.1:+51399735 | None:intergenic |
| GATTATGGGAATGTTTCTTG+CGG | 0.600308 | 1.1:+51400309 | None:intergenic |
| GTGGAATCTTCATTGCCTGA+AGG | 0.600900 | 1.1:-51399799 | MS.gene89567:CDS |
| ATCTGAATCTCTTGTCACCA+GGG | 0.604963 | 1.1:-51401003 | MS.gene89567:CDS |
| TTAGAAGCCATTAACAAACC+GGG | 0.606436 | 1.1:+51399223 | None:intergenic |
| ATAAATGGAATCTCGATCCA+GGG | 0.607813 | 1.1:-51399642 | MS.gene89567:CDS |
| ATTGCAGGAGACCGTGAGCA+AGG | 0.607861 | 1.1:-51399746 | MS.gene89567:CDS |
| ATTTATGAAGAAGTGCTCGC+CGG | 0.609816 | 1.1:+51399659 | None:intergenic |
| TGTCATCTGAAAGGTTCAAG+TGG | 0.610618 | 1.1:+51397815 | None:intergenic |
| ACGCTGCTTTGGATCAGACT+GGG | 0.611127 | 1.1:-51398790 | MS.gene89567:CDS |
| TGAGATGGTATAGTACTGAA+GGG | 0.615082 | 1.1:+51398969 | None:intergenic |
| CCAATTGCTCCCCTGAGCGT+AGG | 0.615359 | 1.1:+51401051 | None:intergenic |
| CGCTCAGGGGAGCAATTGGG+AGG | 0.616293 | 1.1:-51401047 | MS.gene89567:CDS |
| AGGTAAGGACTTGATGGCAA+TGG | 0.618555 | 1.1:-51399293 | MS.gene89567:CDS |
| GCGTCTAAGTACTTCAGCAG+TGG | 0.622569 | 1.1:+51398018 | None:intergenic |
| AGCAAAGGGCCTTTACAAAG+AGG | 0.624063 | 1.1:-51398101 | MS.gene89567:CDS |
| AAGTGCGTCATAAAACTGGA+AGG | 0.625420 | 1.1:-51398896 | MS.gene89567:CDS |
| AAACAGACAGAGCAAATGAA+AGG | 0.626924 | 1.1:+51399419 | None:intergenic |
| GTTTAGAATACGCTGAACAA+AGG | 0.629222 | 1.1:-51398946 | MS.gene89567:CDS |
| GAAATGTCTATACATTCTGT+GGG | 0.629408 | 1.1:-51400275 | MS.gene89567:CDS |
| TGTTAAAGGATGGTTACTGT+TGG | 0.631562 | 1.1:-51398864 | MS.gene89567:CDS |
| ATTTGAGAACGTAGATTAGG+GGG | 0.633365 | 1.1:+51399556 | None:intergenic |
| AATCTACGTTCTCAAATGGA+CGG | 0.634441 | 1.1:-51399550 | MS.gene89567:CDS |
| GCTTCTAGATGTCATGCACT+CGG | 0.643649 | 1.1:-51398309 | MS.gene89567:intron |
| CTTGATCACAAGTTGGACAC+CGG | 0.647590 | 1.1:-51400939 | MS.gene89567:CDS |
| TCCGGCAAACAACATAGAAG+AGG | 0.651451 | 1.1:-51399518 | MS.gene89567:CDS |
| CATTTGAGAACGTAGATTAG+GGG | 0.654581 | 1.1:+51399555 | None:intergenic |
| CAGCAGTGGAGATTAGGCTG+CGG | 0.655573 | 1.1:+51398032 | None:intergenic |
| GAAATTCAAGAGACAATCTG+AGG | 0.658610 | 1.1:-51399038 | MS.gene89567:CDS |
| CAGACAGAGCAAATGAAAGG+TGG | 0.667903 | 1.1:+51399422 | None:intergenic |
| TGCGTCATAAAACTGGAAGG+TGG | 0.682113 | 1.1:-51398893 | MS.gene89567:CDS |
| AATGAAGTTCCTACGCTCAG+GGG | 0.692085 | 1.1:-51401060 | MS.gene89567:CDS |
| TGTACATCAGTCTTTCCCAG+TGG | 0.736555 | 1.1:-51398383 | MS.gene89567:CDS |
| TAAGACAAAGTAGCTTCACG+AGG | 0.755950 | 1.1:+51399682 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATAGTTTTTTTTTTTTT+TGG | + | chr1.1:51398348-51398367 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTTCAAATTTAAC+AGG | - | chr1.1:51400740-51400759 | MS.gene89567:intron | 15.0% |
| !! | GTGACTATAACTATTAAAAT+TGG | - | chr1.1:51400321-51400340 | MS.gene89567:CDS | 20.0% |
| !!! | TAAAAAAGTGAAGTATTTTG+AGG | + | chr1.1:51398026-51398045 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCATAAACTATCT+TGG | + | chr1.1:51398887-51398906 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTACATAGA+CGG | + | chr1.1:51398337-51398356 | None:intergenic | 20.0% |
| ! | AAACTATCTTGGATATCTAA+TGG | + | chr1.1:51398876-51398895 | None:intergenic | 25.0% |
| ! | AAATATTCAATCAGTACAAG+TGG | + | chr1.1:51400276-51400295 | None:intergenic | 25.0% |
| ! | AAATTGGATAAATGTTTCAC+TGG | - | chr1.1:51400337-51400356 | MS.gene89567:CDS | 25.0% |
| ! | AATAAGCTGTTTATCCAAAT+AGG | + | chr1.1:51398117-51398136 | None:intergenic | 25.0% |
| ! | AATGTTGCAAAATTCTATCT+TGG | - | chr1.1:51399770-51399789 | MS.gene89567:CDS | 25.0% |
| ! | CATAATAACTTTGCAAGATT+GGG | + | chr1.1:51399051-51399070 | None:intergenic | 25.0% |
| ! | CATCTCAAGAAAAAGTTAAA+TGG | + | chr1.1:51400655-51400674 | None:intergenic | 25.0% |
| ! | GAGTAATTCTTCCAAATAAT+TGG | + | chr1.1:51399504-51399523 | None:intergenic | 25.0% |
| ! | TATCTATACCATTTGTGATA+GGG | - | chr1.1:51400414-51400433 | MS.gene89567:CDS | 25.0% |
| ! | TCACAAATGGTATAGATAAA+AGG | + | chr1.1:51400412-51400431 | None:intergenic | 25.0% |
| ! | TTATCTATACCATTTGTGAT+AGG | - | chr1.1:51400413-51400432 | MS.gene89567:CDS | 25.0% |
| ! | TTCAAGTGATAATAATCTGT+TGG | + | chr1.1:51400687-51400706 | None:intergenic | 25.0% |
| ! | TTGTAGCTACTATTCTAATT+TGG | - | chr1.1:51398384-51398403 | MS.gene89567:CDS | 25.0% |
| !! | TAAGTTATCATGTGGATTTT+TGG | - | chr1.1:51398044-51398063 | MS.gene89567:CDS | 25.0% |
| !!! | CACTTTTTTAAGTTATCATG+TGG | - | chr1.1:51398036-51398055 | MS.gene89567:CDS | 25.0% |
| !!! | CATTTAACTTTTTCTTGAGA+TGG | - | chr1.1:51400653-51400672 | MS.gene89567:intron | 25.0% |
| !!! | GTTGTTTTTCTTCTATATAG+TGG | - | chr1.1:51399284-51399303 | MS.gene89567:CDS | 25.0% |
| !!! | TTTTTCTTCTATATAGTGGA+GGG | - | chr1.1:51399288-51399307 | MS.gene89567:CDS | 25.0% |
| AAAATATGCATGCAATCTAC+AGG | - | chr1.1:51398411-51398430 | MS.gene89567:CDS | 30.0% | |
| AAGAAACATTCCCATAATCA+TGG | - | chr1.1:51398571-51398590 | MS.gene89567:intron | 30.0% | |
| AATAATTGGCTAAACTCGAT+AGG | + | chr1.1:51399490-51399509 | None:intergenic | 30.0% | |
| AATTACAAAGAGCTAGATCA+TGG | + | chr1.1:51399556-51399575 | None:intergenic | 30.0% | |
| AATTGTTGAGTGATAGAGAA+AGG | - | chr1.1:51399618-51399637 | MS.gene89567:CDS | 30.0% | |
| ACAGAATGTATAGACATTTC+CGG | + | chr1.1:51398601-51398620 | None:intergenic | 30.0% | |
| ATCGAGTTTAGCCAATTATT+TGG | - | chr1.1:51399490-51399509 | MS.gene89567:CDS | 30.0% | |
| CAAAGTTATTATGGACATAG+TGG | - | chr1.1:51399058-51399077 | MS.gene89567:CDS | 30.0% | |
| CCAATCTTGCAAAGTTATTA+TGG | - | chr1.1:51399049-51399068 | MS.gene89567:CDS | 30.0% | |
| CCATAATAACTTTGCAAGAT+TGG | + | chr1.1:51399052-51399071 | None:intergenic | 30.0% | |
| CTCTCTCAATAGAATTGAAT+GGG | - | chr1.1:51399415-51399434 | MS.gene89567:CDS | 30.0% | |
| GAAATGTCTATACATTCTGT+GGG | - | chr1.1:51398601-51398620 | MS.gene89567:intron | 30.0% | |
| GAATTTCTCGAAATCAGAAA+TGG | + | chr1.1:51399825-51399844 | None:intergenic | 30.0% | |
| TAAGAATCAAAAAACCAGCA+AGG | + | chr1.1:51398693-51398712 | None:intergenic | 30.0% | |
| TAGCATATACGAAAACAGAT+TGG | - | chr1.1:51398959-51398978 | MS.gene89567:CDS | 30.0% | |
| TCTCTCTCAATAGAATTGAA+TGG | - | chr1.1:51399414-51399433 | MS.gene89567:CDS | 30.0% | |
| TGAGGGTAAAATATCATCAT+TGG | - | chr1.1:51400988-51401007 | MS.gene89567:CDS | 30.0% | |
| TTCTGCTTCTTCTATATTAC+CGG | + | chr1.1:51397959-51397978 | None:intergenic | 30.0% | |
| TTCTTGGAAGAAGCTATATA+AGG | - | chr1.1:51400237-51400256 | MS.gene89567:CDS | 30.0% | |
| TTGTAGAATTAAGGCCTATT+TGG | - | chr1.1:51398100-51398119 | MS.gene89567:CDS | 30.0% | |
| TTTAGAAGCCATTAACAAAC+CGG | + | chr1.1:51399657-51399676 | None:intergenic | 30.0% | |
| TTTGTATGTCAAGGAATTTG+TGG | - | chr1.1:51398728-51398747 | MS.gene89567:CDS | 30.0% | |
| ! | ATCTGCTCAAAAACAGTTTT+TGG | - | chr1.1:51400045-51400064 | MS.gene89567:intron | 30.0% |
| ! | CAAATTCAGAGCAAAAGTTT+TGG | - | chr1.1:51400214-51400233 | MS.gene89567:CDS | 30.0% |
| ! | GATTGAATATTTCTGCAGAA+TGG | - | chr1.1:51400284-51400303 | MS.gene89567:CDS | 30.0% |
| ! | GTTTTTCTTCTATATAGTGG+AGG | - | chr1.1:51399287-51399306 | MS.gene89567:CDS | 30.0% |
| !! | AGATTGGTTTCAATAACCAT+AGG | - | chr1.1:51398975-51398994 | MS.gene89567:CDS | 30.0% |
| !! | GATCTAGCTCTTTGTAATTA+CGG | - | chr1.1:51399557-51399576 | MS.gene89567:CDS | 30.0% |
| !! | TGGATTTTTGGATATGCATT+TGG | - | chr1.1:51398056-51398075 | MS.gene89567:CDS | 30.0% |
| !! | TTTTCTTCTATATAGTGGAG+GGG | - | chr1.1:51399289-51399308 | MS.gene89567:CDS | 30.0% |
| !!! | CTCTCTTTTTTTGTATGTCA+AGG | - | chr1.1:51398719-51398738 | MS.gene89567:CDS | 30.0% |
| AAACAGACAGAGCAAATGAA+AGG | + | chr1.1:51399460-51399479 | None:intergenic | 35.0% | |
| AATCTACGTTCTCAAATGGA+CGG | - | chr1.1:51399326-51399345 | MS.gene89567:CDS | 35.0% | |
| ACACTTTGACTAATGTCCTA+TGG | + | chr1.1:51398994-51399013 | None:intergenic | 35.0% | |
| ATAAATGGAATCTCGATCCA+GGG | - | chr1.1:51399234-51399253 | MS.gene89567:CDS | 35.0% | |
| ATCATCTGCACACTCAAAAT+TGG | - | chr1.1:51399799-51399818 | MS.gene89567:CDS | 35.0% | |
| ATCTATTATCAACGCTGCTT+TGG | - | chr1.1:51400075-51400094 | MS.gene89567:intron | 35.0% | |
| ATTCAGCGCTTGTAGAATTA+AGG | - | chr1.1:51398091-51398110 | MS.gene89567:CDS | 35.0% | |
| ATTTGAGAACGTAGATTAGG+GGG | + | chr1.1:51399323-51399342 | None:intergenic | 35.0% | |
| ATTTGGAAGAATTACTCCCT+GGG | - | chr1.1:51399507-51399526 | MS.gene89567:CDS | 35.0% | |
| CAGTAACCATCCTTTAACAT+TGG | + | chr1.1:51400011-51400030 | None:intergenic | 35.0% | |
| CATTTGAGAACGTAGATTAG+GGG | + | chr1.1:51399324-51399343 | None:intergenic | 35.0% | |
| CCATTTGAGAACGTAGATTA+GGG | + | chr1.1:51399325-51399344 | None:intergenic | 35.0% | |
| GAAATTCAAGAGACAATCTG+AGG | - | chr1.1:51399838-51399857 | MS.gene89567:intron | 35.0% | |
| GATTATGGGAATGTTTCTTG+CGG | + | chr1.1:51398570-51398589 | None:intergenic | 35.0% | |
| GCTAAAGTTCAAATTGCACT+TGG | - | chr1.1:51400142-51400161 | MS.gene89567:intron | 35.0% | |
| GGAAATGTCTATACATTCTG+TGG | - | chr1.1:51398600-51398619 | MS.gene89567:intron | 35.0% | |
| GGAAGATACGAGTATCAAAA+AGG | - | chr1.1:51398451-51398470 | MS.gene89567:intron | 35.0% | |
| GTGCAAAACAAGGTAGATTA+CGG | + | chr1.1:51398783-51398802 | None:intergenic | 35.0% | |
| TATTTGGAAGAATTACTCCC+TGG | - | chr1.1:51399506-51399525 | MS.gene89567:CDS | 35.0% | |
| TCCATTTGAGAACGTAGATT+AGG | + | chr1.1:51399326-51399345 | None:intergenic | 35.0% | |
| TCTAAAAGCAAAATCGTTGC+AGG | - | chr1.1:51398645-51398664 | MS.gene89567:CDS | 35.0% | |
| TGACATCTAGAAGCAGAATA+CGG | + | chr1.1:51400561-51400580 | None:intergenic | 35.0% | |
| TGCAAAACAAGGTAGATTAC+GGG | + | chr1.1:51398782-51398801 | None:intergenic | 35.0% | |
| TGGAAAACTTGATCACAAGT+TGG | - | chr1.1:51397930-51397949 | MS.gene89567:CDS | 35.0% | |
| TGTTAAAGGATGGTTACTGT+TGG | - | chr1.1:51400012-51400031 | MS.gene89567:intron | 35.0% | |
| TTAGAAGCCATTAACAAACC+GGG | + | chr1.1:51399656-51399675 | None:intergenic | 35.0% | |
| TTCATTTGCTCTGTCTGTTT+CGG | - | chr1.1:51399460-51399479 | MS.gene89567:CDS | 35.0% | |
| ! | AACTTGTGATCAAGTTTTCC+AGG | + | chr1.1:51397931-51397950 | None:intergenic | 35.0% |
| ! | GAAAGGTGGTCTAAAATTGA+AGG | + | chr1.1:51399443-51399462 | None:intergenic | 35.0% |
| ! | GTCTTTGAGGGAATAGATAT+AGG | - | chr1.1:51398496-51398515 | MS.gene89567:intron | 35.0% |
| ! | GTTTAGAATACGCTGAACAA+AGG | - | chr1.1:51399930-51399949 | MS.gene89567:intron | 35.0% |
| ! | TGAGATGGTATAGTACTGAA+GGG | + | chr1.1:51399910-51399929 | None:intergenic | 35.0% |
| !! | GAAAGGGCAATTTTGATCTT+AGG | + | chr1.1:51398532-51398551 | None:intergenic | 35.0% |
| !! | TAATCTTGGCCTTTTTCACA+AGG | - | chr1.1:51400964-51400983 | MS.gene89567:CDS | 35.0% |
| !! | TGCTCAAAAACAGTTTTTGG+AGG | - | chr1.1:51400048-51400067 | MS.gene89567:intron | 35.0% |
| !! | TTTGTGTGTGAGTTTTCAAG+TGG | - | chr1.1:51398300-51398319 | MS.gene89567:intron | 35.0% |
| !! | TTTTTGGTACATAGACGGAA+TGG | + | chr1.1:51398332-51398351 | None:intergenic | 35.0% |
| !!! | AGAGCAAAAGTTTTGGTTCT+TGG | - | chr1.1:51400221-51400240 | MS.gene89567:CDS | 35.0% |
| !!! | CTTTTAGAGCCTCTTTGTAA+AGG | + | chr1.1:51400787-51400806 | None:intergenic | 35.0% |
| !!! | TAATCTACCTTGTTTTGCAC+TGG | - | chr1.1:51398783-51398802 | MS.gene89567:CDS | 35.0% |
| !!! | TGCAGTCAGAACTTTTTTGA+CGG | - | chr1.1:51400901-51400920 | MS.gene89567:CDS | 35.0% |
| AAGTGCGTCATAAAACTGGA+AGG | - | chr1.1:51399980-51399999 | MS.gene89567:intron | 40.0% | |
| AAGTGGCGTGTTAAACTATG+AGG | - | chr1.1:51397993-51398012 | MS.gene89567:CDS | 40.0% | |
| ACAGATTGAATGCTTCTGCT+TGG | - | chr1.1:51400939-51400958 | MS.gene89567:CDS | 40.0% | |
| AGGCGTAATGTATGAAGCAA+AGG | - | chr1.1:51400760-51400779 | MS.gene89567:intron | 40.0% | |
| AGGTAAACAGCTAGAACAGA+AGG | + | chr1.1:51400392-51400411 | None:intergenic | 40.0% | |
| AGGTTTAAAGGTAACCTTGC+TGG | - | chr1.1:51398676-51398695 | MS.gene89567:CDS | 40.0% | |
| AGTGATCATTCTTTCCTACC+TGG | - | chr1.1:51397910-51397929 | MS.gene89567:CDS | 40.0% | |
| ATCTGAATCTCTTGTCACCA+GGG | - | chr1.1:51397873-51397892 | MS.gene89567:CDS | 40.0% | |
| CAGCGTATTCTAAACTGAGA+TGG | + | chr1.1:51399925-51399944 | None:intergenic | 40.0% | |
| CAGGCTCTTGAAAGGTTTAA+AGG | - | chr1.1:51398664-51398683 | MS.gene89567:CDS | 40.0% | |
| CATAAATGGAATCTCGATCC+AGG | - | chr1.1:51399233-51399252 | MS.gene89567:CDS | 40.0% | |
| CATGGAATCTTTCACTTCGA+TGG | + | chr1.1:51399538-51399557 | None:intergenic | 40.0% | |
| CATTCAGCACCAAAGTTATC+AGG | + | chr1.1:51399107-51399126 | None:intergenic | 40.0% | |
| CCCTAATCTACGTTCTCAAA+TGG | - | chr1.1:51399322-51399341 | MS.gene89567:CDS | 40.0% | |
| GAAGGTGGTTCCAATGTTAA+AGG | - | chr1.1:51399998-51400017 | MS.gene89567:intron | 40.0% | |
| GAATTATCTCTGCGAGAAAG+TGG | - | chr1.1:51397976-51397995 | MS.gene89567:CDS | 40.0% | |
| GCTTCTGCTTGGTATAATCT+TGG | - | chr1.1:51400950-51400969 | MS.gene89567:CDS | 40.0% | |
| GGAACTTGGAAGTGGAAATA+TGG | - | chr1.1:51400454-51400473 | MS.gene89567:intron | 40.0% | |
| GGCGTAATGTATGAAGCAAA+GGG | - | chr1.1:51400761-51400780 | MS.gene89567:intron | 40.0% | |
| GGCGTGTCTTTCAAAATCTA+AGG | - | chr1.1:51400527-51400546 | MS.gene89567:intron | 40.0% | |
| GTGACAAGAGATTCAGATGA+AGG | + | chr1.1:51397871-51397890 | None:intergenic | 40.0% | |
| GTGGTTCCAATGTTAAAGGA+TGG | - | chr1.1:51400002-51400021 | MS.gene89567:intron | 40.0% | |
| TAAGACAAAGTAGCTTCACG+AGG | + | chr1.1:51399197-51399216 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTGTTTC+GGG | - | chr1.1:51399461-51399480 | MS.gene89567:CDS | 40.0% | |
| TGCAAAGTGCGTCATAAAAC+TGG | - | chr1.1:51399976-51399995 | MS.gene89567:intron | 40.0% | |
| TTCCCATAATCATGGTGAAC+CGG | - | chr1.1:51398579-51398598 | MS.gene89567:intron | 40.0% | |
| TTCCGGTTCACCATGATTAT+GGG | + | chr1.1:51398584-51398603 | None:intergenic | 40.0% | |
| TTGTAATTACGGAGCAGGTA+AGG | - | chr1.1:51399568-51399587 | MS.gene89567:CDS | 40.0% | |
| TTTCCGGTTCACCATGATTA+TGG | + | chr1.1:51398585-51398604 | None:intergenic | 40.0% | |
| TTTGGATCAGACTGGGAAAT+GGG | - | chr1.1:51400093-51400112 | MS.gene89567:intron | 40.0% | |
| ! | CGAAGCTACAGAATGTTTTC+AGG | - | chr1.1:51401012-51401031 | MS.gene89567:CDS | 40.0% |
| ! | CTGAGATGGTATAGTACTGA+AGG | + | chr1.1:51399911-51399930 | None:intergenic | 40.0% |
| ! | GATGCTTTAGACATTGATCC+TGG | - | chr1.1:51400815-51400834 | MS.gene89567:intron | 40.0% |
| ! | GTCAAAAAAGTTCTGACTGC+AGG | + | chr1.1:51400902-51400921 | None:intergenic | 40.0% |
| ! | GTGAAGCTACTTTGTCTTAC+CGG | - | chr1.1:51399198-51399217 | MS.gene89567:CDS | 40.0% |
| ! | TGGTGCTGAATGTAAATTGC+AGG | - | chr1.1:51399115-51399134 | MS.gene89567:CDS | 40.0% |
| ! | TGTGATCAAGTTTTCCAGGT+AGG | + | chr1.1:51397927-51397946 | None:intergenic | 40.0% |
| ! | TTGTGGTTTTTCGCTGCATA+TGG | - | chr1.1:51398745-51398764 | MS.gene89567:CDS | 40.0% |
| !! | ATTTATGAAGAAGTGCTCGC+CGG | + | chr1.1:51399220-51399239 | None:intergenic | 40.0% |
| !! | GCGTTCTTTGTTTCTGGAAA+GGG | + | chr1.1:51398548-51398567 | None:intergenic | 40.0% |
| !!! | CTTTTTTGACGGATGCTCTA+CGG | - | chr1.1:51400912-51400931 | MS.gene89567:CDS | 40.0% |
| AAGCTGAGTGTACGTCTCAA+TGG | + | chr1.1:51400182-51400201 | None:intergenic | 45.0% | |
| AAGGATGGTTACTGTTGGCA+CGG | - | chr1.1:51400017-51400036 | MS.gene89567:intron | 45.0% | |
| AAGTTATCAGGCAAGCCTTC+AGG | + | chr1.1:51399095-51399114 | None:intergenic | 45.0% | |
| AATCGTTGCAGGCTCTTGAA+AGG | - | chr1.1:51398656-51398675 | MS.gene89567:CDS | 45.0% | |
| ACTTCCTGAAAAGAAGTCCC+TGG | + | chr1.1:51397893-51397912 | None:intergenic | 45.0% | |
| AGCAAAGGGCCTTTACAAAG+AGG | - | chr1.1:51400775-51400794 | MS.gene89567:intron | 45.0% | |
| AGCTGCATTACACGTCTTTG+AGG | - | chr1.1:51398483-51398502 | MS.gene89567:intron | 45.0% | |
| AGTCTCACCAGTGCAAAACA+AGG | + | chr1.1:51398793-51398812 | None:intergenic | 45.0% | |
| CAGACAGAGCAAATGAAAGG+TGG | + | chr1.1:51399457-51399476 | None:intergenic | 45.0% | |
| CATCTGAATCTCTTGTCACC+AGG | - | chr1.1:51397872-51397891 | MS.gene89567:CDS | 45.0% | |
| CTCGGTTACCCTATCACAAA+TGG | + | chr1.1:51400425-51400444 | None:intergenic | 45.0% | |
| CTTTGGATCAGACTGGGAAA+TGG | - | chr1.1:51400092-51400111 | MS.gene89567:intron | 45.0% | |
| GAAGGCTTGCCTGATAACTT+TGG | - | chr1.1:51399095-51399114 | MS.gene89567:CDS | 45.0% | |
| GCTCTTTGTAATTACGGAGC+AGG | - | chr1.1:51399563-51399582 | MS.gene89567:CDS | 45.0% | |
| GCTGCATTACACGTCTTTGA+GGG | - | chr1.1:51398484-51398503 | MS.gene89567:intron | 45.0% | |
| GCTTCTAGATGTCATGCACT+CGG | - | chr1.1:51400567-51400586 | MS.gene89567:intron | 45.0% | |
| GGCGAGCACTTCTTCATAAA+TGG | - | chr1.1:51399219-51399238 | MS.gene89567:CDS | 45.0% | |
| GTACTTCAGCAGTGGAGATT+AGG | + | chr1.1:51400853-51400872 | None:intergenic | 45.0% | |
| GTGGAATCTTCATTGCCTGA+AGG | - | chr1.1:51399077-51399096 | MS.gene89567:CDS | 45.0% | |
| GTTGAGTGATAGAGAAAGGC+CGG | - | chr1.1:51399622-51399641 | MS.gene89567:CDS | 45.0% | |
| TACTGAAGGGTCTCTCATTC+CGG | + | chr1.1:51399897-51399916 | None:intergenic | 45.0% | |
| TCAGCAAGCTTCCACAATTC+TGG | + | chr1.1:51399170-51399189 | None:intergenic | 45.0% | |
| TCCGGCAAACAACATAGAAG+AGG | - | chr1.1:51399358-51399377 | MS.gene89567:CDS | 45.0% | |
| TGAATCTTTGCTACAGTCCC+TGG | + | chr1.1:51399254-51399273 | None:intergenic | 45.0% | |
| TGCGTCATAAAACTGGAAGG+TGG | - | chr1.1:51399983-51400002 | MS.gene89567:intron | 45.0% | |
| TGTACATCAGTCTTTCCCAG+TGG | - | chr1.1:51400493-51400512 | MS.gene89567:intron | 45.0% | |
| TTGAGCTGCTTCCAGAATTG+TGG | - | chr1.1:51399156-51399175 | MS.gene89567:CDS | 45.0% | |
| ! | AGGTAAGGACTTGATGGCAA+TGG | - | chr1.1:51399583-51399602 | MS.gene89567:CDS | 45.0% |
| ! | CAGGAAGCTAGAGCATTACT+AGG | - | chr1.1:51398430-51398449 | MS.gene89567:CDS | 45.0% |
| ! | CTTGATCACAAGTTGGACAC+CGG | - | chr1.1:51397937-51397956 | MS.gene89567:CDS | 45.0% |
| ! | GCCTCTTCTATGTTGTTTGC+CGG | + | chr1.1:51399362-51399381 | None:intergenic | 45.0% |
| ! | TACCCTCAGCCTTGTGAAAA+AGG | + | chr1.1:51400976-51400995 | None:intergenic | 45.0% |
| ! | TTTGCACTGGTGAGACTGTT+TGG | - | chr1.1:51398796-51398815 | MS.gene89567:CDS | 45.0% |
| !! | AACCCTAGTCTTGCAGAAGA+AGG | - | chr1.1:51399689-51399708 | MS.gene89567:CDS | 45.0% |
| !! | ACACGTTCCCGGTTTGTTAA+TGG | - | chr1.1:51399646-51399665 | MS.gene89567:CDS | 45.0% |
| !! | ACCCTAGTCTTGCAGAAGAA+GGG | - | chr1.1:51399690-51399709 | MS.gene89567:CDS | 45.0% |
| !! | GGCGTTCTTTGTTTCTGGAA+AGG | + | chr1.1:51398549-51398568 | None:intergenic | 45.0% |
| AACAAACCGGGAACGTGTTC+CGG | + | chr1.1:51399644-51399663 | None:intergenic | 50.0% | |
| AATGGACGGCTCGTTTGTTC+CGG | - | chr1.1:51399340-51399359 | MS.gene89567:CDS | 50.0% | |
| ACCCCTTCTTCTGCAAGACT+AGG | + | chr1.1:51399695-51399714 | None:intergenic | 50.0% | |
| CACTTCGATGGATAGTCCCA+GGG | + | chr1.1:51399526-51399545 | None:intergenic | 50.0% | |
| CAGACTGGGAAATGGGATCA+GGG | - | chr1.1:51400100-51400119 | MS.gene89567:intron | 50.0% | |
| CCAAGTTCCTAGCACGATCT+CGG | + | chr1.1:51400443-51400462 | None:intergenic | 50.0% | |
| CCCCTTCTTCTGCAAGACTA+GGG | + | chr1.1:51399694-51399713 | None:intergenic | 50.0% | |
| CTTCAAGCCTTGGAAACTGC+TGG | - | chr1.1:51399863-51399882 | MS.gene89567:intron | 50.0% | |
| GCGTCTAAGTACTTCAGCAG+TGG | + | chr1.1:51400861-51400880 | None:intergenic | 50.0% | |
| TCACTTCGATGGATAGTCCC+AGG | + | chr1.1:51399527-51399546 | None:intergenic | 50.0% | |
| TCAGACTGGGAAATGGGATC+AGG | - | chr1.1:51400099-51400118 | MS.gene89567:intron | 50.0% | |
| TCGTGCTAGGAACTTGGAAG+TGG | - | chr1.1:51400446-51400465 | MS.gene89567:CDS | 50.0% | |
| ! | AACGCTGCTTTGGATCAGAC+TGG | - | chr1.1:51400085-51400104 | MS.gene89567:intron | 50.0% |
| ! | ACGCTGCTTTGGATCAGACT+GGG | - | chr1.1:51400086-51400105 | MS.gene89567:intron | 50.0% |
| ! | AGAGCACTTGAGAGCTTGGA+CGG | - | chr1.1:51399728-51399747 | MS.gene89567:CDS | 50.0% |
| ! | ATCTGAGGCACTTCAAGCCT+TGG | - | chr1.1:51399853-51399872 | MS.gene89567:intron | 50.0% |
| ! | CTTGCGGCGTTCTTTGTTTC+TGG | + | chr1.1:51398554-51398573 | None:intergenic | 50.0% |
| ! | GTCACCAGGGACTTCTTTTC+AGG | - | chr1.1:51397886-51397905 | MS.gene89567:CDS | 50.0% |
| !! | CCCTAGTCTTGCAGAAGAAG+GGG | - | chr1.1:51399691-51399710 | MS.gene89567:CDS | 50.0% |
| !! | GGCCTTTTTCACAAGGCTGA+GGG | - | chr1.1:51400971-51400990 | MS.gene89567:CDS | 50.0% |
| !! | TCAGAGAGCACTTGAGAGCT+TGG | - | chr1.1:51399724-51399743 | MS.gene89567:CDS | 50.0% |
| !! | TGGCCTTTTTCACAAGGCTG+AGG | - | chr1.1:51400970-51400989 | MS.gene89567:CDS | 50.0% |
| AGGGTAACCGAGATCGTGCT+AGG | - | chr1.1:51400433-51400452 | MS.gene89567:CDS | 55.0% | |
| ATTGCAGGAGACCGTGAGCA+AGG | - | chr1.1:51399130-51399149 | MS.gene89567:CDS | 55.0% | |
| CAGCAGTGGAGATTAGGCTG+CGG | + | chr1.1:51400847-51400866 | None:intergenic | 55.0% | |
| CAGCTCAACTGCCTTGCTCA+CGG | + | chr1.1:51399144-51399163 | None:intergenic | 55.0% | |
| CCGAGATCGTGCTAGGAACT+TGG | - | chr1.1:51400440-51400459 | MS.gene89567:CDS | 55.0% | |
| CGGAGCAGGTAAGGACTTGA+TGG | - | chr1.1:51399577-51399596 | MS.gene89567:CDS | 55.0% | |
| CGTTCTGCCAGCAGTTTCCA+AGG | + | chr1.1:51399873-51399892 | None:intergenic | 55.0% | |
| CTACGCTCAGGGGAGCAATT+GGG | - | chr1.1:51397826-51397845 | MS.gene89567:CDS | 55.0% | |
| GAAACTGCTGGCAGAACGAC+CGG | - | chr1.1:51399875-51399894 | MS.gene89567:intron | 55.0% | |
| TGGAGATTAGGCTGCGGACA+TGG | + | chr1.1:51400841-51400860 | None:intergenic | 55.0% | |
| TTCCCAGTGGCATGATGCAG+AGG | - | chr1.1:51400506-51400525 | MS.gene89567:intron | 55.0% | |
| ACGCCTCTGCATCATGCCAC+TGG | + | chr1.1:51400512-51400531 | None:intergenic | 60.0% | |
| ATTAGGCTGCGGACATGGCC+AGG | + | chr1.1:51400836-51400855 | None:intergenic | 60.0% | |
| CCAATTGCTCCCCTGAGCGT+AGG | + | chr1.1:51397828-51397847 | None:intergenic | 60.0% | |
| CCTACGCTCAGGGGAGCAAT+TGG | - | chr1.1:51397825-51397844 | MS.gene89567:CDS | 60.0% | |
| CGCCTCTGCATCATGCCACT+GGG | + | chr1.1:51400511-51400530 | None:intergenic | 60.0% | |
| GAAAGGCCGGAACACGTTCC+CGG | - | chr1.1:51399635-51399654 | MS.gene89567:CDS | 60.0% | |
| CGCTCAGGGGAGCAATTGGG+AGG | - | chr1.1:51397829-51397848 | MS.gene89567:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 51397817 | 51401081 | 51397817 | ID=MS.gene89567 |
| chr1.1 | mRNA | 51397817 | 51401081 | 51397817 | ID=MS.gene89567.t1;Parent=MS.gene89567 |
| chr1.1 | exon | 51400884 | 51401081 | 51400884 | ID=MS.gene89567.t1.exon1;Parent=MS.gene89567.t1 |
| chr1.1 | CDS | 51400884 | 51401081 | 51400884 | ID=cds.MS.gene89567.t1;Parent=MS.gene89567.t1 |
| chr1.1 | exon | 51400213 | 51400465 | 51400213 | ID=MS.gene89567.t1.exon2;Parent=MS.gene89567.t1 |
| chr1.1 | CDS | 51400213 | 51400465 | 51400213 | ID=cds.MS.gene89567.t1;Parent=MS.gene89567.t1 |
| chr1.1 | exon | 51398640 | 51399856 | 51398640 | ID=MS.gene89567.t1.exon3;Parent=MS.gene89567.t1 |
| chr1.1 | CDS | 51398640 | 51399856 | 51398640 | ID=cds.MS.gene89567.t1;Parent=MS.gene89567.t1 |
| chr1.1 | exon | 51398310 | 51398463 | 51398310 | ID=MS.gene89567.t1.exon4;Parent=MS.gene89567.t1 |
| chr1.1 | CDS | 51398310 | 51398463 | 51398310 | ID=cds.MS.gene89567.t1;Parent=MS.gene89567.t1 |
| chr1.1 | exon | 51397817 | 51398136 | 51397817 | ID=MS.gene89567.t1.exon5;Parent=MS.gene89567.t1 |
| chr1.1 | CDS | 51397817 | 51398136 | 51397817 | ID=cds.MS.gene89567.t1;Parent=MS.gene89567.t1 |
| Gene Sequence |
| Protein sequence |
