Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005237.t1 | XP_024638392.1 | 97.3 | 1058 | 25 | 2 | 1 | 1055 | 69 | 1125 | 0.00E+00 | 1981.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005237.t1 | Q6A332 | 41.6 | 1104 | 556 | 24 | 1 | 1055 | 69 | 1132 | 4.1e-190 | 666.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005237.t1 | A0A072VM38 | 96.3 | 1068 | 25 | 3 | 1 | 1055 | 69 | 1135 | 0.0e+00 | 1973.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056045 | MS.gene005237 | PPI |
| MS.gene005237 | MS.gene056045 | PPI |
| MS.gene055583 | MS.gene005237 | PPI |
| MS.gene005237 | MS.gene005236 | PPI |
| MS.gene005237 | MS.gene44107 | PPI |
| MS.gene005237 | MS.gene055582 | PPI |
| MS.gene005237 | MS.gene055583 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005237.t1 | MTR_1g083040 | 96.348 | 1068 | 25 | 3 | 1 | 1055 | 69 | 1135 | 0.0 | 2120 |
| MS.gene005237.t1 | MTR_1g083040 | 95.318 | 1068 | 25 | 4 | 1 | 1055 | 69 | 1124 | 0.0 | 2091 |
| MS.gene005237.t1 | MTR_1g083040 | 95.131 | 1068 | 25 | 4 | 1 | 1055 | 69 | 1122 | 0.0 | 2086 |
| MS.gene005237.t1 | MTR_1g083040 | 94.101 | 1068 | 25 | 5 | 1 | 1055 | 69 | 1111 | 0.0 | 2056 |
| MS.gene005237.t1 | MTR_1g083040 | 95.600 | 750 | 19 | 3 | 1 | 737 | 69 | 817 | 0.0 | 1463 |
| MS.gene005237.t1 | MTR_4g119390 | 42.807 | 1133 | 523 | 30 | 1 | 1055 | 78 | 1163 | 0.0 | 711 |
| MS.gene005237.t1 | MTR_4g119390 | 42.472 | 1149 | 539 | 33 | 1 | 1055 | 78 | 1198 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005237.t1 | AT3G21430 | 41.883 | 1115 | 533 | 26 | 1 | 1055 | 69 | 1128 | 0.0 | 718 |
| MS.gene005237.t1 | AT3G21430 | 41.883 | 1115 | 533 | 26 | 1 | 1055 | 69 | 1128 | 0.0 | 718 |
| MS.gene005237.t1 | AT3G21430 | 41.912 | 1119 | 531 | 27 | 1 | 1055 | 69 | 1132 | 0.0 | 717 |
| MS.gene005237.t1 | AT3G05380 | 45.261 | 844 | 377 | 24 | 1 | 787 | 67 | 882 | 0.0 | 591 |
| MS.gene005237.t1 | AT3G05380 | 53.179 | 173 | 73 | 4 | 884 | 1055 | 887 | 1052 | 2.42e-44 | 175 |
| MS.gene005237.t1 | AT3G05380 | 45.261 | 844 | 377 | 24 | 1 | 787 | 66 | 881 | 0.0 | 591 |
| MS.gene005237.t1 | AT3G05380 | 53.179 | 173 | 73 | 4 | 884 | 1055 | 886 | 1051 | 2.42e-44 | 175 |
| MS.gene005237.t1 | AT3G05380 | 45.261 | 844 | 377 | 24 | 1 | 787 | 67 | 882 | 0.0 | 591 |
| MS.gene005237.t1 | AT3G05380 | 53.179 | 173 | 73 | 4 | 884 | 1055 | 887 | 1052 | 2.42e-44 | 175 |
| MS.gene005237.t1 | AT3G05380 | 45.261 | 844 | 377 | 24 | 1 | 787 | 67 | 882 | 0.0 | 591 |
| MS.gene005237.t1 | AT3G05380 | 53.179 | 173 | 73 | 4 | 884 | 1055 | 887 | 1052 | 2.42e-44 | 175 |
| MS.gene005237.t1 | AT3G05380 | 44.952 | 832 | 374 | 23 | 12 | 787 | 1 | 804 | 0.0 | 578 |
| MS.gene005237.t1 | AT3G05380 | 53.179 | 173 | 73 | 4 | 884 | 1055 | 809 | 974 | 2.35e-44 | 175 |
| MS.gene005237.t1 | AT5G27610 | 40.364 | 825 | 341 | 26 | 1 | 768 | 67 | 797 | 6.56e-146 | 461 |
| MS.gene005237.t1 | AT5G27610 | 43.011 | 186 | 99 | 3 | 870 | 1055 | 792 | 970 | 9.41e-32 | 134 |
Find 225 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATGAATCTCTCTTGTTT+TGG | 0.149228 | 1.4:-67120045 | None:intergenic |
| TAGCTGTTTGTCATCTTATT+TGG | 0.158728 | 1.4:+67119584 | MS.gene005237:CDS |
| ATTAATGGAAATTCAAGTTT+TGG | 0.224585 | 1.4:+67120767 | MS.gene005237:CDS |
| CGTCTACTTCTTTGTTTAGT+TGG | 0.235444 | 1.4:-67119353 | None:intergenic |
| TTCTTTGAAGGAAAATAATA+TGG | 0.244666 | 1.4:+67116852 | MS.gene005237:CDS |
| TTAAACATTCTATGCCATTT+TGG | 0.249911 | 1.4:-67122103 | None:intergenic |
| ATTTGAATTTCTCTGTAAAT+AGG | 0.271279 | 1.4:-67123496 | None:intergenic |
| AGCACAGAGGTTACCAATAT+TGG | 0.278915 | 1.4:-67121672 | None:intergenic |
| GTACTCCACAAATTCTCTTT+TGG | 0.279992 | 1.4:-67119664 | None:intergenic |
| AGTATAGAACCACATATTAA+TGG | 0.291083 | 1.4:+67120752 | MS.gene005237:CDS |
| TTCGAGTATCGCACGGTTGC+AGG | 0.302283 | 1.4:-67123468 | None:intergenic |
| TGATGAATTCAACTCCTAAC+TGG | 0.311762 | 1.4:-67120121 | None:intergenic |
| TTGACCGTCTTTATTTGTTT+TGG | 0.312836 | 1.4:-67119245 | None:intergenic |
| AAAGCGTGCTCTAGATAAAA+AGG | 0.313137 | 1.4:+67121772 | MS.gene005237:CDS |
| GTCACTTCCCAGGCCAATAT+TGG | 0.328742 | 1.4:+67121659 | MS.gene005237:CDS |
| TCAGAATCTTTGTGCAGTTT+CGG | 0.329467 | 1.4:-67123025 | None:intergenic |
| AATGCTGGATGCTGCATTTC+AGG | 0.332422 | 1.4:+67122470 | MS.gene005237:CDS |
| TACTAGTTCCTTGATGGATA+TGG | 0.336948 | 1.4:+67116693 | MS.gene005237:CDS |
| TAGAGATACTAGTTCCTTGA+TGG | 0.342926 | 1.4:+67116687 | MS.gene005237:CDS |
| TTGAGTGGAGTGTCATAAAA+AGG | 0.349014 | 1.4:+67119730 | MS.gene005237:CDS |
| GGCATATTGGAAAACCAAAA+TGG | 0.350448 | 1.4:+67122089 | MS.gene005237:CDS |
| AAAGATGCTATTACGAAGAT+TGG | 0.351072 | 1.4:+67122851 | MS.gene005237:CDS |
| ATGGCCATCAAAATTTGCTT+TGG | 0.355548 | 1.4:-67122352 | None:intergenic |
| AGCCTCGTGCTGTTGGAAAA+AGG | 0.356186 | 1.4:+67116162 | MS.gene005237:CDS |
| TTCCATTTGCTGATAAGATA+TGG | 0.360437 | 1.4:+67118289 | MS.gene005237:CDS |
| TAGAGAGAGGCAACCATCAC+TGG | 0.361044 | 1.4:-67115482 | None:intergenic |
| CACGAGCTGTCTCTGACATT+TGG | 0.361609 | 1.4:-67116582 | None:intergenic |
| AGATGGACTTCCAACAGATT+TGG | 0.362036 | 1.4:+67119980 | MS.gene005237:CDS |
| GGCTACATTAACCATGATTC+AGG | 0.369905 | 1.4:+67123093 | MS.gene005237:CDS |
| CTTGGATGCTTTGCAAACTT+TGG | 0.371982 | 1.4:+67117123 | MS.gene005237:CDS |
| ACTCTCAAAAGAAAGATGAT+AGG | 0.373372 | 1.4:+67116207 | MS.gene005237:CDS |
| ACTGTCATTGAAATCATTAA+AGG | 0.374232 | 1.4:+67122426 | MS.gene005237:CDS |
| GAAAGCAGGGGAGCTGAAAA+TGG | 0.374259 | 1.4:+67116655 | MS.gene005237:CDS |
| GCTTCGGGCATATTATCTAA+TGG | 0.375299 | 1.4:-67120689 | None:intergenic |
| ATCTGCCTCCTCAAAGCTTC+GGG | 0.377312 | 1.4:-67120704 | None:intergenic |
| TAGGGATGAGAGCTAAAATC+TGG | 0.378728 | 1.4:-67123540 | None:intergenic |
| ATGGCTTGTTGATGTTGATT+CGG | 0.382537 | 1.4:-67118157 | None:intergenic |
| GAGGGGACAGCTTCTGTTGT+AGG | 0.386769 | 1.4:+67114927 | MS.gene005237:CDS |
| GAGCTTCGAAATGCTAATAA+TGG | 0.388504 | 1.4:+67122068 | MS.gene005237:CDS |
| AAATGCTAATAATGGCATAT+TGG | 0.389348 | 1.4:+67122076 | MS.gene005237:CDS |
| CTGAAGAAAAGACGCATTGA+TGG | 0.393599 | 1.4:+67115505 | MS.gene005237:CDS |
| TGGCCATCAAAATTTGCTTT+GGG | 0.396560 | 1.4:-67122351 | None:intergenic |
| TCAATCTTTCTCCCTTCAAC+TGG | 0.396796 | 1.4:-67118104 | None:intergenic |
| AGCTTGAAGTCTACTGTTGA+TGG | 0.408517 | 1.4:+67116257 | MS.gene005237:CDS |
| CAGTTCGATCGTCCCCAGTT+AGG | 0.409738 | 1.4:+67120107 | MS.gene005237:CDS |
| GTCTTTAATTACCTGAATCA+TGG | 0.409754 | 1.4:-67123104 | None:intergenic |
| TGGCTTGTTGATGTTGATTC+GGG | 0.410687 | 1.4:-67118156 | None:intergenic |
| GAGAAGATATAATTCTAAGT+AGG | 0.419321 | 1.4:-67123559 | None:intergenic |
| AATCTGCCTCCTCAAAGCTT+CGG | 0.421550 | 1.4:-67120705 | None:intergenic |
| TTCCATATCTTATCAGCAAA+TGG | 0.431294 | 1.4:-67118291 | None:intergenic |
| TACGAAGATTGGGCAGGCAT+TGG | 0.432224 | 1.4:+67122862 | MS.gene005237:CDS |
| ACACGTTGTCCAACATATAA+TGG | 0.433131 | 1.4:-67120008 | None:intergenic |
| GAGGCAACGCAATACCTATA+CGG | 0.433200 | 1.4:+67122302 | MS.gene005237:CDS |
| AAGAGCTTCCACCATTTCAA+TGG | 0.436695 | 1.4:-67114619 | None:intergenic |
| CATGAAGTGATGAGCTCAAA+TGG | 0.441310 | 1.4:-67123067 | None:intergenic |
| CCGTCTTCTGAAGTAGAATC+TGG | 0.447167 | 1.4:+67117166 | MS.gene005237:CDS |
| AAGCTCTTTACAATATGAAT+CGG | 0.447230 | 1.4:+67114634 | MS.gene005237:CDS |
| CTTGAATTTCCATTAATATG+TGG | 0.449653 | 1.4:-67120761 | None:intergenic |
| ACTTGTTTCTGCAGTTCCCT+TGG | 0.450351 | 1.4:+67119849 | MS.gene005237:intron |
| CTGATACCATGCTTCAATTG+AGG | 0.455978 | 1.4:+67122283 | MS.gene005237:CDS |
| CACTCAACACGAGTTAGCCT+TGG | 0.457331 | 1.4:-67119714 | None:intergenic |
| CATTGCATGTGCCTGTAGCC+TGG | 0.458879 | 1.4:-67122451 | None:intergenic |
| GTTTGCCAAAAGAGAATTTG+TGG | 0.458990 | 1.4:+67119659 | MS.gene005237:CDS |
| AATATCTGAGCCACATCAGC+TGG | 0.464887 | 1.4:-67123427 | None:intergenic |
| CACAGAAGCATCGAGAAACT+TGG | 0.464933 | 1.4:-67116605 | None:intergenic |
| AGAAGATATAATTCTAAGTA+GGG | 0.465953 | 1.4:-67123558 | None:intergenic |
| AAAGAAAGAGTGGAAAATGT+TGG | 0.469922 | 1.4:+67116766 | MS.gene005237:CDS |
| TGCTCAGAGCCGGGATAGAA+TGG | 0.470304 | 1.4:+67116394 | MS.gene005237:CDS |
| TGGAAGGTAGTCTTGAAAGC+AGG | 0.470580 | 1.4:+67116641 | MS.gene005237:CDS |
| AGAATCACGTCTCCAGTTGA+AGG | 0.473764 | 1.4:+67118092 | MS.gene005237:intron |
| TTTCTCGATGCTTCTGTGGA+TGG | 0.475165 | 1.4:+67116610 | MS.gene005237:CDS |
| TATCACAGGCAACCTGTACT+TGG | 0.476810 | 1.4:-67122912 | None:intergenic |
| AGTTCTCTCCTGCTCAGAGC+CGG | 0.477289 | 1.4:+67116384 | MS.gene005237:CDS |
| ATGGAAGGAACGAGCACTGC+TGG | 0.477901 | 1.4:+67116712 | MS.gene005237:CDS |
| TGGAAGTAACAGACTGAGAC+TGG | 0.479884 | 1.4:-67115462 | None:intergenic |
| ATAATATGCCCGAAGCTTTG+AGG | 0.481922 | 1.4:+67120696 | MS.gene005237:CDS |
| CTTAACTAAAGCACTTGAAG+AGG | 0.482863 | 1.4:-67120828 | None:intergenic |
| GAGCACTGCTGGAGTTCCTA+AGG | 0.483645 | 1.4:+67116723 | MS.gene005237:CDS |
| CATTAAAGGATCCAGGCTAC+AGG | 0.484028 | 1.4:+67122440 | MS.gene005237:CDS |
| ATTCTATCCCGGCTCTGAGC+AGG | 0.485679 | 1.4:-67116392 | None:intergenic |
| TGGCAGAGAGGTTTCCGTAT+AGG | 0.486136 | 1.4:-67122316 | None:intergenic |
| GCTACAGGCACATGCAATGC+TGG | 0.487202 | 1.4:+67122455 | MS.gene005237:CDS |
| GTTGAAGGGAGAAAGATTGA+TGG | 0.487498 | 1.4:+67118107 | MS.gene005237:CDS |
| TTGAAATCATTAAAGGATCC+AGG | 0.488460 | 1.4:+67122433 | MS.gene005237:CDS |
| AATGGTCTTGCCAAATCTGT+TGG | 0.489638 | 1.4:-67119990 | None:intergenic |
| CCTTTACTTAACGATGCATC+TGG | 0.490660 | 1.4:+67123001 | MS.gene005237:CDS |
| GCATGCAGCGGCACTGAAGA+AGG | 0.491447 | 1.4:+67116817 | MS.gene005237:CDS |
| AGAGGTTACCAATATTGGCC+TGG | 0.491630 | 1.4:-67121667 | None:intergenic |
| CATCTTATTTGGTTCGCAGA+TGG | 0.495359 | 1.4:+67119595 | MS.gene005237:CDS |
| GCACGCAGTAAAACCTCAAA+AGG | 0.495393 | 1.4:-67119269 | None:intergenic |
| AACAGATGAAATCCACGCCT+TGG | 0.497756 | 1.4:+67117105 | MS.gene005237:intron |
| GCACGGTTGCAGGCTGGTAA+CGG | 0.498043 | 1.4:-67123458 | None:intergenic |
| CAGAGAAATTCAAATGTGCA+TGG | 0.498649 | 1.4:+67123504 | MS.gene005237:CDS |
| GGTCTGCAGCCTCGTGCTGT+TGG | 0.500748 | 1.4:+67116155 | MS.gene005237:intron |
| ACGTAATAGATCCATTGAAA+TGG | 0.501185 | 1.4:+67114608 | MS.gene005237:CDS |
| GAACTAACTTCACTTAAAAG+TGG | 0.502840 | 1.4:-67119329 | None:intergenic |
| TAATAAGCACTCTACCCAAA+AGG | 0.509532 | 1.4:+67119445 | MS.gene005237:CDS |
| CAGTCTGTTACTTCCAGTGA+TGG | 0.510709 | 1.4:+67115469 | MS.gene005237:CDS |
| GACAGATCATTATAATGTCC+TGG | 0.510737 | 1.4:+67114965 | MS.gene005237:CDS |
| AGTACAGGTTGCCTGTGATA+AGG | 0.511473 | 1.4:+67122915 | MS.gene005237:CDS |
| CTCTCAAAAGAAAGATGATA+GGG | 0.511587 | 1.4:+67116208 | MS.gene005237:CDS |
| GAAGAGGGGCGTACCTTCAC+AGG | 0.513156 | 1.4:-67120812 | None:intergenic |
| AAGATGCTATTACGAAGATT+GGG | 0.513873 | 1.4:+67122852 | MS.gene005237:CDS |
| TTTGCTTTGGGCTTCATCCA+TGG | 0.515055 | 1.4:-67122339 | None:intergenic |
| GCTAAAGGAAGCCAGTGGAC+AGG | 0.515599 | 1.4:+67122172 | MS.gene005237:CDS |
| TGGTTCTATACTCGTAAAAG+AGG | 0.516423 | 1.4:-67120741 | None:intergenic |
| GTTCTCTCCTGCTCAGAGCC+GGG | 0.518889 | 1.4:+67116385 | MS.gene005237:CDS |
| CACGGTACTTGTAGAGCTAA+AGG | 0.519139 | 1.4:+67122157 | MS.gene005237:CDS |
| TACTTAAATCATGTTGGACT+AGG | 0.519442 | 1.4:+67119684 | MS.gene005237:CDS |
| AGGAAGAGAGTGATAGTGAA+AGG | 0.519581 | 1.4:+67115356 | MS.gene005237:intron |
| CATTATTCTGAGCTGCGGAC+TGG | 0.520480 | 1.4:+67119951 | MS.gene005237:CDS |
| AGCTCTTTACAATATGAATC+GGG | 0.520904 | 1.4:+67114635 | MS.gene005237:CDS |
| ATAGAACTATCCGACATACT+AGG | 0.521403 | 1.4:-67122384 | None:intergenic |
| GGAAGAGAGTGATAGTGAAA+GGG | 0.522040 | 1.4:+67115357 | MS.gene005237:intron |
| TTACAGAAAGAAAGAAAGAG+TGG | 0.522065 | 1.4:+67116756 | MS.gene005237:CDS |
| GTGGAGTACTTAAATCATGT+TGG | 0.522193 | 1.4:+67119678 | MS.gene005237:CDS |
| TTCTGTTCTCCTCTCCTATG+TGG | 0.525089 | 1.4:-67116362 | None:intergenic |
| TCAAGTGCTTTAGTTAAGCA+AGG | 0.526265 | 1.4:+67120833 | MS.gene005237:CDS |
| CAAAGTTTGCAAAGCATCCA+AGG | 0.526548 | 1.4:-67117122 | None:intergenic |
| GGAAATTATCAGCTTGATGA+CGG | 0.526857 | 1.4:+67116787 | MS.gene005237:CDS |
| GAAGCCACATGCCTGTCCAC+TGG | 0.527209 | 1.4:-67122183 | None:intergenic |
| ATATTATCTAATGGATTCAA+AGG | 0.530582 | 1.4:-67120680 | None:intergenic |
| GCAAAAGTCCACTGTGTCAA+AGG | 0.530832 | 1.4:+67118320 | MS.gene005237:CDS |
| GATGAATTCAACTCCTAACT+GGG | 0.531998 | 1.4:-67120120 | None:intergenic |
| TTGGCAAGACCATTATATGT+TGG | 0.532186 | 1.4:+67119999 | MS.gene005237:CDS |
| ATGTGGTGTCTGAGAAACTA+GGG | 0.533355 | 1.4:-67116345 | None:intergenic |
| ACAACAGAAGCTGTCCCCTC+TGG | 0.533993 | 1.4:-67114924 | None:intergenic |
| GACTTATCTTTACGCATGGA+TGG | 0.534395 | 1.4:-67119395 | None:intergenic |
| CACAGGCAACCTGTACTTGG+TGG | 0.535612 | 1.4:-67122909 | None:intergenic |
| ATAGTGCACTTGATTATCCA+TGG | 0.536074 | 1.4:+67119637 | MS.gene005237:CDS |
| ACTGAATTCTGCACTTGTCA+TGG | 0.538319 | 1.4:-67120088 | None:intergenic |
| CGGCATCATTAGAGATAGAT+CGG | 0.538917 | 1.4:-67117146 | None:intergenic |
| TGCTTTAGTTAAGCAAGGAA+AGG | 0.541102 | 1.4:+67120838 | MS.gene005237:CDS |
| GGAAGGTAGTCTTGAAAGCA+GGG | 0.541939 | 1.4:+67116642 | MS.gene005237:CDS |
| ACTCAACACGAGTTAGCCTT+GGG | 0.542670 | 1.4:-67119713 | None:intergenic |
| AGCAGTTGTCCACCAAGTAC+AGG | 0.544298 | 1.4:+67122900 | MS.gene005237:CDS |
| TGCTAACCATGTCACTTCCC+AGG | 0.548811 | 1.4:+67121649 | MS.gene005237:CDS |
| CTGCGGACTGGTATAAGAGA+TGG | 0.549190 | 1.4:+67119963 | MS.gene005237:CDS |
| TTAACTAAAGCACTTGAAGA+GGG | 0.552147 | 1.4:-67120827 | None:intergenic |
| ATAAGACTTATCTTTACGCA+TGG | 0.553936 | 1.4:-67119399 | None:intergenic |
| AGGTCTCAAGATCAAGTGAA+TGG | 0.554399 | 1.4:+67122935 | MS.gene005237:CDS |
| CGTTCCTTCCATATCCATCA+AGG | 0.554433 | 1.4:-67116701 | None:intergenic |
| TATGTGGTGTCTGAGAAACT+AGG | 0.554615 | 1.4:-67116346 | None:intergenic |
| CCAGATGCATCGTTAAGTAA+AGG | 0.554967 | 1.4:-67123001 | None:intergenic |
| AAAACCTGCGTGGTTTGCCA+AGG | 0.555120 | 1.4:-67119866 | None:intergenic |
| GAAGCTTTGAGGAGGCAGAT+TGG | 0.556916 | 1.4:+67120707 | MS.gene005237:CDS |
| GAATTTCTCTGTAAATAGGA+AGG | 0.557537 | 1.4:-67123492 | None:intergenic |
| TGCTATTACGAAGATTGGGC+AGG | 0.562780 | 1.4:+67122856 | MS.gene005237:CDS |
| GTTCTATGACACAAGAGTCT+AGG | 0.563001 | 1.4:+67122400 | MS.gene005237:CDS |
| ACTTCAGCTTAATGTCTCAA+AGG | 0.565165 | 1.4:+67115432 | MS.gene005237:CDS |
| ACATACTAGGAAGGTCATCA+TGG | 0.567760 | 1.4:-67122371 | None:intergenic |
| TTTGCAAAGCATCCAAGGCG+TGG | 0.570904 | 1.4:-67117117 | None:intergenic |
| GAGGTTACCAATATTGGCCT+GGG | 0.571947 | 1.4:-67121666 | None:intergenic |
| TTTGAAGGAAAATAATATGG+AGG | 0.574084 | 1.4:+67116855 | MS.gene005237:CDS |
| GCAATACCCTCCAGCTGATG+TGG | 0.575728 | 1.4:+67123417 | MS.gene005237:CDS |
| AGTATCGCACGGTTGCAGGC+TGG | 0.577322 | 1.4:-67123464 | None:intergenic |
| AGGGAGAGCAATGATGCACC+AGG | 0.581666 | 1.4:+67115376 | MS.gene005237:CDS |
| CACTTTACACGGTTGAGCAG+AGG | 0.582929 | 1.4:-67121702 | None:intergenic |
| GAATGTTTAAAAGATTCTGA+AGG | 0.583011 | 1.4:+67122116 | MS.gene005237:CDS |
| CCAGATTCTACTTCAGAAGA+CGG | 0.586286 | 1.4:-67117166 | None:intergenic |
| TGGTCTCAAGCTACAAAGGA+AGG | 0.586757 | 1.4:+67122827 | MS.gene005237:CDS |
| GTTCCCTTGGCAAACCACGC+AGG | 0.587364 | 1.4:+67119862 | MS.gene005237:intron |
| AGAGAAATTCAAATGTGCAT+GGG | 0.587897 | 1.4:+67123505 | MS.gene005237:CDS |
| ACTTAAATCATGTTGGACTA+GGG | 0.588058 | 1.4:+67119685 | MS.gene005237:CDS |
| TGATGTTGCATCACTTTACA+CGG | 0.589402 | 1.4:-67121713 | None:intergenic |
| GTAACAGACTGAGACTGGAC+AGG | 0.589416 | 1.4:-67115457 | None:intergenic |
| CAAGGCTAACTCGTGTTGAG+TGG | 0.590048 | 1.4:+67119715 | MS.gene005237:CDS |
| TATTGGCCTGGGAAGTGACA+TGG | 0.591157 | 1.4:-67121655 | None:intergenic |
| TAATAGATCCATTGAAATGG+TGG | 0.592802 | 1.4:+67114611 | MS.gene005237:CDS |
| AAAACAAGAGAGATTCATGA+TGG | 0.598180 | 1.4:+67120047 | MS.gene005237:CDS |
| TGATCTTGAGACCTTATCAC+AGG | 0.600930 | 1.4:-67122926 | None:intergenic |
| CTTCATCCATGGTGGCAGAG+AGG | 0.603440 | 1.4:-67122328 | None:intergenic |
| ATCTGAGCCACATCAGCTGG+AGG | 0.605296 | 1.4:-67123424 | None:intergenic |
| AAACCTGCGTGGTTTGCCAA+GGG | 0.605604 | 1.4:-67119865 | None:intergenic |
| AGGGATGAGAGCTAAAATCT+GGG | 0.606466 | 1.4:-67123539 | None:intergenic |
| CAAGTTTCTCGATGCTTCTG+TGG | 0.606617 | 1.4:+67116606 | MS.gene005237:CDS |
| GGCATGGTCTCAAGCTACAA+AGG | 0.609766 | 1.4:+67122823 | MS.gene005237:intron |
| CGGAAACCTCTCTGCCACCA+TGG | 0.610537 | 1.4:+67122322 | MS.gene005237:CDS |
| AATCAACATCAACAAGCCAT+AGG | 0.617002 | 1.4:+67118160 | MS.gene005237:CDS |
| GCGTTGCCTCAATTGAAGCA+TGG | 0.617652 | 1.4:-67122289 | None:intergenic |
| GAATCACGTCTCCAGTTGAA+GGG | 0.618260 | 1.4:+67118093 | MS.gene005237:intron |
| GCATATCTATCTCTACCAGA+GGG | 0.620511 | 1.4:+67114909 | MS.gene005237:CDS |
| AGTTGAATACCATTCTATCC+CGG | 0.621666 | 1.4:-67116403 | None:intergenic |
| AGCACTGCTGGAGTTCCTAA+GGG | 0.622103 | 1.4:+67116724 | MS.gene005237:CDS |
| TTACTGCGTGCTGATCAGAA+AGG | 0.622646 | 1.4:+67119281 | MS.gene005237:CDS |
| ACTTGCAGAGTTGTACTGAA+CGG | 0.624851 | 1.4:+67123395 | MS.gene005237:intron |
| TGACAGAATTACCTCCAAAG+AGG | 0.625229 | 1.4:-67116939 | None:intergenic |
| GGCATATCTATCTCTACCAG+AGG | 0.628948 | 1.4:+67114908 | MS.gene005237:intron |
| TGATGACCTTCCTAGTATGT+CGG | 0.630040 | 1.4:+67122374 | MS.gene005237:CDS |
| TGAGCTCATCACTTCATGTG+TGG | 0.634529 | 1.4:+67123072 | MS.gene005237:CDS |
| TCTGAGCCACATCAGCTGGA+GGG | 0.645393 | 1.4:-67123423 | None:intergenic |
| TTTCAAGAAGCATTATGCCA+CGG | 0.645708 | 1.4:+67122139 | MS.gene005237:CDS |
| AACTATCCGACATACTAGGA+AGG | 0.646168 | 1.4:-67122380 | None:intergenic |
| GCTTTGGGCTTCATCCATGG+TGG | 0.646183 | 1.4:-67122336 | None:intergenic |
| TTAAGCAGGGCTTCACAAAG+AGG | 0.648843 | 1.4:+67116314 | MS.gene005237:CDS |
| GGAAGGTTTCGAGTATCGCA+CGG | 0.648915 | 1.4:-67123475 | None:intergenic |
| GACGGAGGAGAAGCATGCAG+CGG | 0.650843 | 1.4:+67116805 | MS.gene005237:CDS |
| AGTTCCTTGATGGATATGGA+AGG | 0.652302 | 1.4:+67116697 | MS.gene005237:CDS |
| AGCAGGGCTTCACAAAGAGG+AGG | 0.653229 | 1.4:+67116317 | MS.gene005237:CDS |
| GTTAGGAGTTGAATTCATCA+CGG | 0.655789 | 1.4:+67120124 | MS.gene005237:CDS |
| CTCACCAAAACAAATAAAGA+CGG | 0.659655 | 1.4:+67119241 | MS.gene005237:CDS |
| TTGGACTAGGGAATATCCCA+AGG | 0.661354 | 1.4:+67119697 | MS.gene005237:CDS |
| AATTATCAGCTTGATGACGG+AGG | 0.663340 | 1.4:+67116790 | MS.gene005237:CDS |
| TATACTTGCCTTTGACACAG+TGG | 0.663441 | 1.4:-67118328 | None:intergenic |
| AATTCTCCCCAACAAGTCAG+CGG | 0.664103 | 1.4:+67116899 | MS.gene005237:CDS |
| TAACTAAAGCACTTGAAGAG+GGG | 0.666484 | 1.4:-67120826 | None:intergenic |
| AATGCATGCTTCACCTGTGA+AGG | 0.667655 | 1.4:+67120799 | MS.gene005237:CDS |
| TAGTTTCTCAGACACCACAT+AGG | 0.669340 | 1.4:+67116348 | MS.gene005237:CDS |
| AATGGATCTATTACGTACAG+CGG | 0.676588 | 1.4:-67114601 | None:intergenic |
| CTTTAGCTCTACAAGTACCG+TGG | 0.680662 | 1.4:-67122156 | None:intergenic |
| CAGAGGCAGCTTGAGCACAG+AGG | 0.682588 | 1.4:-67121685 | None:intergenic |
| TCTCAGACACCACATAGGAG+AGG | 0.683376 | 1.4:+67116353 | MS.gene005237:CDS |
| GAGTGGTAAACTGGGACTCG+TGG | 0.685072 | 1.4:-67116188 | None:intergenic |
| ACTGCTGGAGTTCCTAAGGG+AGG | 0.691043 | 1.4:+67116727 | MS.gene005237:CDS |
| GAAGGTAGTCTTGAAAGCAG+GGG | 0.695243 | 1.4:+67116643 | MS.gene005237:CDS |
| ATATGCCCGAAGCTTTGAGG+AGG | 0.696255 | 1.4:+67120699 | MS.gene005237:CDS |
| GGAAACATTATTCTGAGCTG+CGG | 0.699382 | 1.4:+67119946 | MS.gene005237:CDS |
| AAGTGTTCCGAAAACCTGCG+TGG | 0.699640 | 1.4:-67119876 | None:intergenic |
| TGTGGTGTCTGAGAAACTAG+GGG | 0.699681 | 1.4:-67116344 | None:intergenic |
| AAATAAAGTTAAAATTCGTG+CGG | 0.700583 | 1.4:+67118185 | MS.gene005237:CDS |
| AACAGTATCGAGAATCAGTG+AGG | 0.709059 | 1.4:+67119925 | MS.gene005237:CDS |
| GATCTGTCATCATTGCAATG+AGG | 0.714057 | 1.4:-67114950 | None:intergenic |
| GTAGAGCTAAAGGAAGCCAG+TGG | 0.716008 | 1.4:+67122167 | MS.gene005237:CDS |
| ATGAATTCAACTCCTAACTG+GGG | 0.726781 | 1.4:-67120119 | None:intergenic |
| CATATCTATCTCTACCAGAG+GGG | 0.741033 | 1.4:+67114910 | MS.gene005237:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67114594 | 67123567 | 67114594 | ID=MS.gene005237 |
| chr1.4 | mRNA | 67114594 | 67123567 | 67114594 | ID=MS.gene005237.t1;Parent=MS.gene005237 |
| chr1.4 | exon | 67114594 | 67114656 | 67114594 | ID=MS.gene005237.t1.exon1;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67114594 | 67114656 | 67114594 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67114909 | 67114986 | 67114909 | ID=MS.gene005237.t1.exon2;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67114909 | 67114986 | 67114909 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67115358 | 67115526 | 67115358 | ID=MS.gene005237.t1.exon3;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67115358 | 67115526 | 67115358 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67116156 | 67116415 | 67116156 | ID=MS.gene005237.t1.exon4;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67116156 | 67116415 | 67116156 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67116580 | 67116949 | 67116580 | ID=MS.gene005237.t1.exon5;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67116580 | 67116949 | 67116580 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67117110 | 67117187 | 67117110 | ID=MS.gene005237.t1.exon6;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67117110 | 67117187 | 67117110 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67118094 | 67118341 | 67118094 | ID=MS.gene005237.t1.exon7;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67118094 | 67118341 | 67118094 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67119182 | 67119466 | 67119182 | ID=MS.gene005237.t1.exon8;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67119182 | 67119466 | 67119182 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67119573 | 67119751 | 67119573 | ID=MS.gene005237.t1.exon9;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67119573 | 67119751 | 67119573 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67119863 | 67120145 | 67119863 | ID=MS.gene005237.t1.exon10;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67119863 | 67120145 | 67119863 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67120665 | 67120859 | 67120665 | ID=MS.gene005237.t1.exon11;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67120665 | 67120859 | 67120665 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67121644 | 67121793 | 67121644 | ID=MS.gene005237.t1.exon12;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67121644 | 67121793 | 67121644 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67122053 | 67122193 | 67122053 | ID=MS.gene005237.t1.exon13;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67122053 | 67122193 | 67122053 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67122279 | 67122491 | 67122279 | ID=MS.gene005237.t1.exon14;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67122279 | 67122491 | 67122279 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67122824 | 67123114 | 67122824 | ID=MS.gene005237.t1.exon15;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67122824 | 67123114 | 67122824 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| chr1.4 | exon | 67123403 | 67123567 | 67123403 | ID=MS.gene005237.t1.exon16;Parent=MS.gene005237.t1 |
| chr1.4 | CDS | 67123403 | 67123567 | 67123403 | ID=cds.MS.gene005237.t1;Parent=MS.gene005237.t1 |
| Gene Sequence |
| Protein sequence |
