Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005416.t1 | XP_013469143.1 | 98.2 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.00E+00 | 1080.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005416.t1 | P55826 | 77.6 | 540 | 115 | 2 | 12 | 551 | 4 | 537 | 3.2e-239 | 828.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005416.t1 | A0A072VNG3 | 98.2 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.0e+00 | 1080.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005416 | MS.gene025636 | PPI |
| MS.gene005416 | MS.gene034800 | PPI |
| MS.gene005416 | MS.gene007149 | PPI |
| MS.gene005416 | MS.gene055647 | PPI |
| MS.gene005416 | MS.gene41080 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005416.t1 | MTR_1g085730 | 98.185 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1097 |
| MS.gene005416.t1 | MTR_1g085730 | 97.527 | 364 | 9 | 0 | 1 | 364 | 1 | 364 | 0.0 | 723 |
| MS.gene005416.t1 | MTR_7g031310 | 29.615 | 493 | 310 | 14 | 73 | 545 | 16 | 491 | 4.36e-51 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005416.t1 | AT4G01690 | 78.889 | 540 | 108 | 4 | 12 | 551 | 4 | 537 | 0.0 | 854 |
| MS.gene005416.t1 | AT4G01690 | 74.259 | 540 | 102 | 5 | 12 | 551 | 4 | 506 | 0.0 | 784 |
| MS.gene005416.t1 | AT5G14220 | 27.959 | 490 | 319 | 12 | 75 | 545 | 21 | 495 | 3.02e-49 | 178 |
| MS.gene005416.t1 | AT5G14220 | 27.959 | 490 | 319 | 12 | 75 | 545 | 69 | 543 | 7.28e-49 | 178 |
| MS.gene005416.t1 | AT5G14220 | 28.041 | 485 | 295 | 14 | 75 | 545 | 21 | 465 | 8.42e-47 | 171 |
| MS.gene005416.t1 | AT5G14220 | 26.398 | 447 | 299 | 11 | 118 | 545 | 2 | 437 | 3.34e-40 | 152 |
| MS.gene005416.t1 | AT5G14220 | 26.398 | 447 | 299 | 11 | 118 | 545 | 2 | 437 | 3.34e-40 | 152 |
Find 173 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCAGGATCCAATTGTTT+TGG | 0.225364 | 1.1:+63518941 | MS.gene005416:CDS |
| CAAAATGGTGGTAGCATTAT+TGG | 0.232913 | 1.1:+63516470 | MS.gene005416:CDS |
| CCTGAGCATTTGGATTTATA+AGG | 0.239671 | 1.1:-63518926 | None:intergenic |
| ATTGGAGGGGCTACCAATTC+TGG | 0.258952 | 1.1:+63518352 | MS.gene005416:CDS |
| GATTTGAGGGGCTGTTCCTT+GGG | 0.259606 | 1.1:+63519054 | MS.gene005416:CDS |
| CGGAGAAGGGTTTGAGAGGG+TGG | 0.262547 | 1.1:-63513736 | None:intergenic |
| TGCAAAGAAACAACTCCTTC+TGG | 0.269612 | 1.1:-63516894 | None:intergenic |
| TGGAGAGAGATGGGTTTCTT+TGG | 0.273128 | 1.1:+63514061 | MS.gene005416:CDS |
| TCTCTCCTGTATTGCTTTGA+AGG | 0.274882 | 1.1:-63516498 | None:intergenic |
| GGCAAGATCAGGGCTGGCTT+TGG | 0.280653 | 1.1:+63515016 | MS.gene005416:CDS |
| GGCAAATCAGTTGGCTTTCC+CGG | 0.284184 | 1.1:-63514968 | None:intergenic |
| TCTGATCTAATGGCTTCTTT+TGG | 0.297997 | 1.1:-63518029 | None:intergenic |
| ACAATTGGATCCTGAGCATT+TGG | 0.304286 | 1.1:-63518936 | None:intergenic |
| GATGGTGAGTTGAAGGGATT+TGG | 0.305933 | 1.1:+63518062 | MS.gene005416:CDS |
| TTAAGTATGAAAGCAGCTTT+TGG | 0.310156 | 1.1:+63516428 | MS.gene005416:CDS |
| TTTGAAGGACGATCTTGTTT+TGG | 0.318825 | 1.1:+63514892 | MS.gene005416:CDS |
| GCCTCGGTAACAACAACATT+GGG | 0.323168 | 1.1:-63514006 | None:intergenic |
| TCAGAAGGTTGAAAACTATT+AGG | 0.342704 | 1.1:-63514093 | None:intergenic |
| CTTCCAGGTGGTGCTCGGTT+AGG | 0.346004 | 1.1:-63518310 | None:intergenic |
| CCATTCCACAACACAAATCT+AGG | 0.348854 | 1.1:-63514929 | None:intergenic |
| GGATTTGAGGGGCTGTTCCT+TGG | 0.351474 | 1.1:+63519053 | MS.gene005416:CDS |
| ACAGTTTGACCCTTTGGCTT+TGG | 0.353786 | 1.1:-63516638 | None:intergenic |
| TACCTAATGTTTGCACTCCT+TGG | 0.364807 | 1.1:-63518103 | None:intergenic |
| TGAGTATTGGTGGCAAGATC+AGG | 0.365761 | 1.1:+63515005 | MS.gene005416:CDS |
| GAGTTCGTGCGTCGAAATCT+TGG | 0.366392 | 1.1:+63515226 | MS.gene005416:CDS |
| TTCTTTGACTTAATGAGTAT+TGG | 0.369041 | 1.1:+63514992 | MS.gene005416:CDS |
| TTGAATTGGAGGAGGGGAAA+GGG | 0.374371 | 1.1:-63513774 | None:intergenic |
| GTAACAAGGTGAAGTTATCT+TGG | 0.380123 | 1.1:+63516814 | MS.gene005416:CDS |
| GCTATTCCACAGTTCTTAGT+TGG | 0.382466 | 1.1:+63518984 | MS.gene005416:CDS |
| GAAATGGAAACTGCCGCAAC+TGG | 0.385344 | 1.1:-63518002 | None:intergenic |
| GCAAAGAAACAACTCCTTCT+GGG | 0.387031 | 1.1:-63516893 | None:intergenic |
| TATCAAGCATTCTGATCTAA+TGG | 0.392972 | 1.1:-63518039 | None:intergenic |
| GGAGAGAGATGGGTTTCTTT+GGG | 0.394520 | 1.1:+63514062 | MS.gene005416:CDS |
| TGGCTCTGACCTGAACAAAA+AGG | 0.394707 | 1.1:-63515277 | None:intergenic |
| CTTTGATAAAATCCCAGAAT+TGG | 0.395418 | 1.1:-63518365 | None:intergenic |
| CTATGTGTCTGGTGTTGCCT+TGG | 0.396049 | 1.1:+63519082 | MS.gene005416:CDS |
| AGTTCGTGCGTCGAAATCTT+GGG | 0.397568 | 1.1:+63515227 | MS.gene005416:CDS |
| TTCAAGAGTAGAACCCTTCC+AGG | 0.398239 | 1.1:-63518325 | None:intergenic |
| TTCCAGGTGGTGCTCGGTTA+GGG | 0.398524 | 1.1:-63518309 | None:intergenic |
| GATCCAACAGTTTGACCCTT+TGG | 0.399991 | 1.1:-63516644 | None:intergenic |
| GATGGGTTTCTTTGGGAAGA+AGG | 0.407260 | 1.1:+63514069 | MS.gene005416:CDS |
| GGTTTGAGAGGGTGGGAAGA+AGG | 0.407669 | 1.1:-63513728 | None:intergenic |
| GGGAAAGGGGAATGGAGATG+AGG | 0.409681 | 1.1:-63513760 | None:intergenic |
| ACCACCTCAAAATCAAATTC+CGG | 0.416364 | 1.1:+63513889 | MS.gene005416:CDS |
| TTGGAGGGGCTACCAATTCT+GGG | 0.425638 | 1.1:+63518353 | MS.gene005416:CDS |
| TGGGAAATTGAGGCCGGTGC+CGG | 0.426371 | 1.1:+63514949 | MS.gene005416:CDS |
| GTGGTGCTCGGTTAGGGAAA+AGG | 0.428455 | 1.1:-63518303 | None:intergenic |
| GTCAAACTGTTGGATCATTC+CGG | 0.429218 | 1.1:+63516651 | MS.gene005416:CDS |
| GCAACATGGTAAGTCCCTTC+CGG | 0.429534 | 1.1:-63516670 | None:intergenic |
| AATGGAGATGAGGGCGGAGA+AGG | 0.430870 | 1.1:-63513750 | None:intergenic |
| AGTATTAGTAAACTGGATAG+TGG | 0.439960 | 1.1:+63516846 | MS.gene005416:CDS |
| CTAGATTTGTGTTGTGGAAT+GGG | 0.440359 | 1.1:+63514930 | MS.gene005416:CDS |
| AGGGCTGGCTTTGGAGCACT+TGG | 0.442410 | 1.1:+63515025 | MS.gene005416:CDS |
| TACCTAGCAGAAATTGCGTT+TGG | 0.443372 | 1.1:-63516692 | None:intergenic |
| TGGAGGAGGGGAAAGGGGAA+TGG | 0.448268 | 1.1:-63513768 | None:intergenic |
| ATGGAGATGAGGGCGGAGAA+GGG | 0.448458 | 1.1:-63513749 | None:intergenic |
| GGAAAGGGGAATGGAGATGA+GGG | 0.452855 | 1.1:-63513759 | None:intergenic |
| TTTGAATTGGAGGAGGGGAA+AGG | 0.454290 | 1.1:-63513775 | None:intergenic |
| TGAATTGGAGGAGGGGAAAG+GGG | 0.455157 | 1.1:-63513773 | None:intergenic |
| AAGGGGAATGGAGATGAGGG+CGG | 0.459680 | 1.1:-63513756 | None:intergenic |
| TCAGTTGGCTTTCCCGGCAC+CGG | 0.460917 | 1.1:-63514962 | None:intergenic |
| TACTCTTGAATTACATTGGA+GGG | 0.461041 | 1.1:+63518338 | MS.gene005416:CDS |
| GGAGACGGAGAATGGGGTTA+TGG | 0.461330 | 1.1:-63513825 | None:intergenic |
| TATGTGTCTGGTGTTGCCTT+GGG | 0.462152 | 1.1:+63519083 | MS.gene005416:CDS |
| GTGTGGAGGCTCGAACAAAA+TGG | 0.463440 | 1.1:+63516455 | MS.gene005416:CDS |
| GGAGCAACGGAGACGGAGAA+TGG | 0.472053 | 1.1:-63513833 | None:intergenic |
| AAGGAACAGCCCCTCAAATC+CGG | 0.472268 | 1.1:-63519051 | None:intergenic |
| GTTCTACTCTTGAATTACAT+TGG | 0.473931 | 1.1:+63518334 | MS.gene005416:CDS |
| AGAAAACACACTGGAGGAGG+AGG | 0.474459 | 1.1:-63515055 | None:intergenic |
| AACACAAATCTAGGTGCATC+AGG | 0.475052 | 1.1:-63514920 | None:intergenic |
| GAGCAACGGAGACGGAGAAT+GGG | 0.476836 | 1.1:-63513832 | None:intergenic |
| TGGTGCTCGGTTAGGGAAAA+GGG | 0.478452 | 1.1:-63518302 | None:intergenic |
| TTTGACTTAATGAGTATTGG+TGG | 0.479201 | 1.1:+63514995 | MS.gene005416:CDS |
| GAAAGTGCATCTGCAGCAGC+AGG | 0.479760 | 1.1:-63517963 | None:intergenic |
| GGGAAATTGAGGCCGGTGCC+GGG | 0.482439 | 1.1:+63514950 | MS.gene005416:CDS |
| AGATCAGAATGCTTGATAGA+TGG | 0.483446 | 1.1:+63518044 | MS.gene005416:CDS |
| CGCCTCGGTAACAACAACAT+TGG | 0.487396 | 1.1:-63514007 | None:intergenic |
| GCCTTGGGAAGGTGTGTTGA+GGG | 0.489434 | 1.1:+63519098 | MS.gene005416:CDS |
| CCTTATAAATCCAAATGCTC+AGG | 0.489745 | 1.1:+63518926 | MS.gene005416:CDS |
| GCGTCGAAATCTTGGGGCCG+AGG | 0.491211 | 1.1:+63515234 | MS.gene005416:CDS |
| AGCCAAGGAGTGCAAACATT+AGG | 0.492529 | 1.1:+63518101 | MS.gene005416:CDS |
| GACTGTGTGGTTGTTGGTGG+TGG | 0.492721 | 1.1:+63513928 | MS.gene005416:CDS |
| TTCCCTAACCGAGCACCACC+TGG | 0.500403 | 1.1:+63518307 | MS.gene005416:CDS |
| CTTGATAGATGGTGAGTTGA+AGG | 0.501381 | 1.1:+63518055 | MS.gene005416:CDS |
| ATTTGAGGGGCTGTTCCTTG+GGG | 0.502668 | 1.1:+63519055 | MS.gene005416:CDS |
| AAGCCAAAGGGTCAAACTGT+TGG | 0.506404 | 1.1:+63516641 | MS.gene005416:CDS |
| GTGACAGGGTCATGAGGAAT+CGG | 0.511762 | 1.1:+63515198 | MS.gene005416:intron |
| TCCGTCGACTGTGTGGTTGT+TGG | 0.512497 | 1.1:+63513922 | MS.gene005416:CDS |
| ATTATTACCGTGGAGAGAGA+TGG | 0.512962 | 1.1:+63514051 | MS.gene005416:CDS |
| TGCCTTGGGAAGGTGTGTTG+AGG | 0.513044 | 1.1:+63519097 | MS.gene005416:CDS |
| TGGAGCCTTCAAAGCAATAC+AGG | 0.517480 | 1.1:+63516493 | MS.gene005416:CDS |
| CCTAGATTTGTGTTGTGGAA+TGG | 0.519996 | 1.1:+63514929 | MS.gene005416:CDS |
| AGGGCGGAGAAGGGTTTGAG+AGG | 0.522166 | 1.1:-63513740 | None:intergenic |
| ATACTCATTAAGTCAAAGAA+AGG | 0.523934 | 1.1:-63514989 | None:intergenic |
| ACAGACAGTGGTTGCAGCAA+TGG | 0.525178 | 1.1:-63516960 | None:intergenic |
| GTTGTTGGTGGTGGCATCAG+TGG | 0.527241 | 1.1:+63513937 | MS.gene005416:CDS |
| CAGTGGACTATGTATTGCTC+AGG | 0.529861 | 1.1:+63513954 | MS.gene005416:CDS |
| CTACTCTTGAATTACATTGG+AGG | 0.531064 | 1.1:+63518337 | MS.gene005416:CDS |
| TTATTACCGTGGAGAGAGAT+GGG | 0.537500 | 1.1:+63514052 | MS.gene005416:CDS |
| CCGCAATGGAGCAACGGAGA+CGG | 0.540345 | 1.1:-63513840 | None:intergenic |
| CAAAGAAACAACTCCTTCTG+GGG | 0.540704 | 1.1:-63516892 | None:intergenic |
| GCAGGTGGACAGTGGTTTGA+AGG | 0.542677 | 1.1:+63514877 | MS.gene005416:intron |
| AGAAATTGCGTTTGGCAACA+TGG | 0.544410 | 1.1:-63516684 | None:intergenic |
| TGTTGTGGAATGGGAAATTG+AGG | 0.544788 | 1.1:+63514939 | MS.gene005416:CDS |
| ATTGGTGGCAAGATCAGGGC+TGG | 0.549710 | 1.1:+63515010 | MS.gene005416:CDS |
| ACTCTTGAATTACATTGGAG+GGG | 0.550694 | 1.1:+63518339 | MS.gene005416:CDS |
| AAAAGAAAACACACTGGAGG+AGG | 0.550713 | 1.1:-63515058 | None:intergenic |
| GAACCCTTCCAGGTGGTGCT+CGG | 0.551325 | 1.1:-63518315 | None:intergenic |
| GTCGACTGTGTGGTTGTTGG+TGG | 0.553915 | 1.1:+63513925 | MS.gene005416:CDS |
| TCAAAGAAAGGCAAATCAGT+TGG | 0.554397 | 1.1:-63514977 | None:intergenic |
| GATTTGGTCAATTGCATCCA+CGG | 0.558189 | 1.1:+63518078 | MS.gene005416:CDS |
| GGAGAAGGGTTTGAGAGGGT+GGG | 0.559498 | 1.1:-63513735 | None:intergenic |
| TGTCTGGTGTTGCCTTGGGA+AGG | 0.559605 | 1.1:+63519087 | MS.gene005416:CDS |
| TCATATACAGGTGTCTATGC+CGG | 0.563153 | 1.1:+63516392 | MS.gene005416:intron |
| GAGTATTGGTGGCAAGATCA+GGG | 0.567150 | 1.1:+63515006 | MS.gene005416:CDS |
| TTTGAGGGGCTGTTCCTTGG+GGG | 0.567319 | 1.1:+63519056 | MS.gene005416:CDS |
| TGCGGTGGATTCCTCCGCAA+TGG | 0.568908 | 1.1:-63513854 | None:intergenic |
| TAGGCGTCTGCCAAAGCCAA+AGG | 0.571021 | 1.1:+63516628 | MS.gene005416:intron |
| GAGGCGAAAGATCGAGTTGG+TGG | 0.572541 | 1.1:+63514024 | MS.gene005416:CDS |
| ATGCACCTAGATTTGTGTTG+TGG | 0.582787 | 1.1:+63514924 | MS.gene005416:CDS |
| TAACCGAGCACCACCTGGAA+GGG | 0.584581 | 1.1:+63518312 | MS.gene005416:CDS |
| CAATTGCATCCACGGAGCCA+AGG | 0.584598 | 1.1:+63518086 | MS.gene005416:CDS |
| AACCACACAGTCGACGGATG+AGG | 0.587789 | 1.1:-63513917 | None:intergenic |
| AGGCGTCTGCCAAAGCCAAA+GGG | 0.588421 | 1.1:+63516629 | MS.gene005416:intron |
| AATGGTGGTAGCATTATTGG+TGG | 0.588539 | 1.1:+63516473 | MS.gene005416:CDS |
| CTAACCGAGCACCACCTGGA+AGG | 0.589476 | 1.1:+63518311 | MS.gene005416:CDS |
| AACTGTTGGATCATTCCGGA+AGG | 0.589794 | 1.1:+63516655 | MS.gene005416:CDS |
| TGTTGGCAGGTTAGGTAACA+AGG | 0.592433 | 1.1:+63516800 | MS.gene005416:intron |
| GTCGACGGATGAGGACTCTC+CGG | 0.593499 | 1.1:-63513908 | None:intergenic |
| GCAGCAATGGACTAGCAACA+TGG | 0.594611 | 1.1:-63516947 | None:intergenic |
| ACTAGCAACATGGGAAGGAA+TGG | 0.596346 | 1.1:-63516937 | None:intergenic |
| CCGTCTCCGTTGCTCCATTG+CGG | 0.597409 | 1.1:+63513840 | MS.gene005416:CDS |
| ACCAACAACCACACAGTCGA+CGG | 0.599076 | 1.1:-63513923 | None:intergenic |
| TCCCTCAACACACCTTCCCA+AGG | 0.601614 | 1.1:-63519099 | None:intergenic |
| CTTTCTACAAAGCATGCTGA+TGG | 0.605299 | 1.1:+63513979 | MS.gene005416:CDS |
| TTTGTTTAATTGCAGACGGA+GGG | 0.606182 | 1.1:+63518864 | MS.gene005416:intron |
| GGGCGGAGAAGGGTTTGAGA+GGG | 0.606191 | 1.1:-63513739 | None:intergenic |
| GTTTGCACTCCTTGGCTCCG+TGG | 0.607612 | 1.1:-63518095 | None:intergenic |
| TACTTCAGCTGCTATCTCGT+AGG | 0.608699 | 1.1:-63519123 | None:intergenic |
| ACCAACTCGATCTTTCGCCT+CGG | 0.609410 | 1.1:-63514022 | None:intergenic |
| GAAAACACACTGGAGGAGGA+GGG | 0.609629 | 1.1:-63515054 | None:intergenic |
| CCCCAATGTTGTTGTTACCG+AGG | 0.610569 | 1.1:+63514005 | MS.gene005416:CDS |
| ATGGTGAGCATAGGATCAGA+AGG | 0.615324 | 1.1:-63514108 | None:intergenic |
| CATACCACCATGGTGAGCAT+AGG | 0.615890 | 1.1:-63514117 | None:intergenic |
| ATGGAAACTGCCGCAACTGG+AGG | 0.618307 | 1.1:-63517999 | None:intergenic |
| TCTCCGTTGCTCCATTGCGG+AGG | 0.619176 | 1.1:+63513843 | MS.gene005416:CDS |
| TGATCCTATGCTCACCATGG+TGG | 0.621350 | 1.1:+63514113 | MS.gene005416:CDS |
| ATTCCTCCGCAATGGAGCAA+CGG | 0.621982 | 1.1:-63513846 | None:intergenic |
| TGCCAAACGCAATTTCTGCT+AGG | 0.622423 | 1.1:+63516690 | MS.gene005416:CDS |
| GTCCTCATCCGTCGACTGTG+TGG | 0.625269 | 1.1:+63513915 | MS.gene005416:CDS |
| AAGAACTGTGGAATAGCTTG+AGG | 0.628529 | 1.1:-63518978 | None:intergenic |
| TTGATAGATGGTGAGTTGAA+GGG | 0.630684 | 1.1:+63518056 | MS.gene005416:CDS |
| TGCAGAGAGTGTACAAGTAG+CGG | 0.631367 | 1.1:+63519159 | MS.gene005416:CDS |
| ACGAAGGTGACAGGGTCATG+AGG | 0.634684 | 1.1:+63515192 | MS.gene005416:intron |
| GTGGAATGGGAAATTGAGGC+CGG | 0.635091 | 1.1:+63514943 | MS.gene005416:CDS |
| AAGAAACCCATCTCTCTCCA+CGG | 0.637483 | 1.1:-63514058 | None:intergenic |
| AGGCGAAAGATCGAGTTGGT+GGG | 0.637489 | 1.1:+63514025 | MS.gene005416:CDS |
| CAGCAATGGACTAGCAACAT+GGG | 0.637669 | 1.1:-63516946 | None:intergenic |
| TGGTGGGAATATTATTACCG+TGG | 0.637750 | 1.1:+63514041 | MS.gene005416:CDS |
| TTATTTGTGCAGGTGGACAG+TGG | 0.638748 | 1.1:+63514869 | MS.gene005416:intron |
| AATGGACTAGCAACATGGGA+AGG | 0.638945 | 1.1:-63516942 | None:intergenic |
| GTTCGTGCGTCGAAATCTTG+GGG | 0.639972 | 1.1:+63515228 | MS.gene005416:CDS |
| AGATGTCCAACTAAGAACTG+TGG | 0.655954 | 1.1:-63518990 | None:intergenic |
| TTCTGATCCTATGCTCACCA+TGG | 0.662399 | 1.1:+63514110 | MS.gene005416:CDS |
| GAAGAAGGTGAGTGTAACCA+TGG | 0.663337 | 1.1:-63513713 | None:intergenic |
| AGCAACGGAGACGGAGAATG+GGG | 0.663402 | 1.1:-63513831 | None:intergenic |
| ACCGAGGCGAAAGATCGAGT+TGG | 0.669092 | 1.1:+63514021 | MS.gene005416:CDS |
| TTGACGTATGAAACCCCAGA+AGG | 0.670583 | 1.1:+63516879 | MS.gene005416:CDS |
| ACTGTTGGATCATTCCGGAA+GGG | 0.675135 | 1.1:+63516656 | MS.gene005416:CDS |
| TGGAGGCTCGAACAAAATGG+TGG | 0.692440 | 1.1:+63516458 | MS.gene005416:CDS |
| TTGATTACAACATACCACCA+TGG | 0.703359 | 1.1:-63514127 | None:intergenic |
| CCTCGGTAACAACAACATTG+GGG | 0.719137 | 1.1:-63514005 | None:intergenic |
| AAGAGTAGAACCCTTCCAGG+TGG | 0.742286 | 1.1:-63518322 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAATTAAACAAAAGAA+AGG | - | chr1.1:63515088-63515107 | None:intergenic | 15.0% |
| !! | ACTATGTTAAATGAAATATA+TGG | + | chr1.1:63515108-63515127 | MS.gene005416:intron | 15.0% |
| !! | AGAAAATTAAACAAAAGAAA+GGG | - | chr1.1:63515087-63515106 | None:intergenic | 15.0% |
| !! | ATGAAGTAATATTAAAGAAA+AGG | - | chr1.1:63516314-63516333 | None:intergenic | 15.0% |
| !! | TAATGCAAATATTAAAGAAA+AGG | - | chr1.1:63516340-63516359 | None:intergenic | 15.0% |
| !! | TTGAAATTGAAATTGAAATT+TGG | + | chr1.1:63514199-63514218 | MS.gene005416:intron | 15.0% |
| !! | TTTCTTTAATATTTGCATTA+AGG | + | chr1.1:63516340-63516359 | MS.gene005416:intron | 15.0% |
| !!! | AAATTAAGTTGGATATTTTT+TGG | - | chr1.1:63515899-63515918 | None:intergenic | 15.0% |
| !!! | AATGAATTTTGATTTTGAAT+TGG | - | chr1.1:63513791-63513810 | None:intergenic | 15.0% |
| !!! | AGTTTTATTAGTTGAATATT+TGG | + | chr1.1:63517028-63517047 | MS.gene005416:intron | 15.0% |
| !!! | GTCATTTTTTTTAGTAAATT+TGG | + | chr1.1:63514280-63514299 | MS.gene005416:intron | 15.0% |
| !!! | TTATGTCTTTTCATATTTAT+CGG | - | chr1.1:63514445-63514464 | None:intergenic | 15.0% |
| !!! | TTTTATATAATATAGGAGTT+TGG | + | chr1.1:63515390-63515409 | MS.gene005416:intron | 15.0% |
| !! | AAAGTTTCTCTTAAAAATAC+CGG | + | chr1.1:63519032-63519051 | MS.gene005416:CDS | 20.0% |
| !! | AAGAAACTTCTTATTCTATT+AGG | - | chr1.1:63515477-63515496 | None:intergenic | 20.0% |
| !! | AAGTATGTAAAATATGTAAC+AGG | - | chr1.1:63518766-63518785 | None:intergenic | 20.0% |
| !! | ATATGATATAATATTGACGA+AGG | + | chr1.1:63515176-63515195 | MS.gene005416:intron | 20.0% |
| !! | TAAACGTATCAAAATAGAAA+AGG | + | chr1.1:63514248-63514267 | MS.gene005416:intron | 20.0% |
| !! | TACAGTTCATAATTTATACT+TGG | - | chr1.1:63518205-63518224 | None:intergenic | 20.0% |
| !! | TATTGCCAATTAAAAAAACA+AGG | - | chr1.1:63517522-63517541 | None:intergenic | 20.0% |
| !! | TCATTTATAAGAGGAAAAAT+TGG | - | chr1.1:63516248-63516267 | None:intergenic | 20.0% |
| !! | TCATTTCATATCAAAATATC+CGG | - | chr1.1:63516051-63516070 | None:intergenic | 20.0% |
| !! | TGTGATTGATATAATAATAC+TGG | - | chr1.1:63517496-63517515 | None:intergenic | 20.0% |
| !! | TTAAATGAAATATATGGAAC+TGG | + | chr1.1:63515114-63515133 | MS.gene005416:intron | 20.0% |
| !! | TTGAATTTATTATGCAAAAG+TGG | + | chr1.1:63518131-63518150 | MS.gene005416:intron | 20.0% |
| !!! | AAATTTCAGTTTTTAAGAGA+CGG | - | chr1.1:63515537-63515556 | None:intergenic | 20.0% |
| !!! | ACAAATAAGTTATTTCTGAA+TGG | + | chr1.1:63517864-63517883 | MS.gene005416:intron | 20.0% |
| !!! | ATAATTGATTAATTAGCTTC+TGG | + | chr1.1:63514340-63514359 | MS.gene005416:intron | 20.0% |
| !!! | ATGGATTTGAAATATTCTTT+GGG | - | chr1.1:63515506-63515525 | None:intergenic | 20.0% |
| !!! | CAAGAGTAAATGTATTTTTA+CGG | - | chr1.1:63516551-63516570 | None:intergenic | 20.0% |
| !!! | CATAACTCTAAAATATTACA+AGG | - | chr1.1:63517614-63517633 | None:intergenic | 20.0% |
| !!! | CGGAGATTTTTATATAATAT+AGG | + | chr1.1:63515383-63515402 | MS.gene005416:intron | 20.0% |
| !!! | GATTTTTCTATAAAAATCAG+AGG | - | chr1.1:63517249-63517268 | None:intergenic | 20.0% |
| !!! | TAGAGATGTTTTTGTAATTT+TGG | + | chr1.1:63514786-63514805 | MS.gene005416:intron | 20.0% |
| !!! | TGAGTTTTAAACAAATGAAA+AGG | - | chr1.1:63515825-63515844 | None:intergenic | 20.0% |
| !!! | TTTTGTAATTTTGGAACATT+TGG | + | chr1.1:63514795-63514814 | MS.gene005416:intron | 20.0% |
| ! | AAAATCAGAGGATGATAAAT+AGG | - | chr1.1:63517237-63517256 | None:intergenic | 25.0% |
| ! | AAATCAGAGGATGATAAATA+GGG | - | chr1.1:63517236-63517255 | None:intergenic | 25.0% |
| ! | AAATTGGAAGAAAGGAAAAA+TGG | - | chr1.1:63516232-63516251 | None:intergenic | 25.0% |
| ! | AAGTAAACAACCGATATTTA+AGG | - | chr1.1:63517757-63517776 | None:intergenic | 25.0% |
| ! | AAGTTTAAACACTTGAAACA+AGG | - | chr1.1:63518571-63518590 | None:intergenic | 25.0% |
| ! | ATACTCATTAAGTCAAAGAA+AGG | - | chr1.1:63514992-63515011 | None:intergenic | 25.0% |
| ! | ATGGTGCATTTATCAAATTA+AGG | - | chr1.1:63516213-63516232 | None:intergenic | 25.0% |
| ! | ATTTGCATAGATTAAGACTT+TGG | + | chr1.1:63515560-63515579 | MS.gene005416:intron | 25.0% |
| ! | CAGAATCAAAGACAAAAATT+TGG | + | chr1.1:63517413-63517432 | MS.gene005416:intron | 25.0% |
| ! | CTAGAATCTTGTGAAAAAAT+TGG | + | chr1.1:63514556-63514575 | MS.gene005416:intron | 25.0% |
| ! | GTAATTATTAAAAAATCGCG+TGG | - | chr1.1:63518179-63518198 | None:intergenic | 25.0% |
| ! | GTTCATAATTTATACTTGGA+TGG | - | chr1.1:63518201-63518220 | None:intergenic | 25.0% |
| ! | TATATGATCAAATAACAGAG+AGG | - | chr1.1:63518743-63518762 | None:intergenic | 25.0% |
| ! | TTAACAATAATTTCACAGTC+AGG | - | chr1.1:63517574-63517593 | None:intergenic | 25.0% |
| ! | TTTCCAAAAACTTACTACTA+CGG | + | chr1.1:63517328-63517347 | MS.gene005416:intron | 25.0% |
| ! | TTTGCATAGATTAAGACTTT+GGG | + | chr1.1:63515561-63515580 | MS.gene005416:intron | 25.0% |
| !! | GATGGATTTGAAATATTCTT+TGG | - | chr1.1:63515507-63515526 | None:intergenic | 25.0% |
| !! | GCTTTCATACTTAATTTTGA+AGG | - | chr1.1:63516422-63516441 | None:intergenic | 25.0% |
| !! | TAAAATGTGTTGTGTAGTTT+TGG | + | chr1.1:63518223-63518242 | MS.gene005416:intron | 25.0% |
| !! | TACATTTACTCTTGAGTTTT+TGG | + | chr1.1:63516557-63516576 | MS.gene005416:intron | 25.0% |
| !! | TGGATTTGAAATATTCTTTG+GGG | - | chr1.1:63515505-63515524 | None:intergenic | 25.0% |
| !! | TTCATATTTATCGGTTAGTT+TGG | - | chr1.1:63514436-63514455 | None:intergenic | 25.0% |
| !! | TTCTTTGACTTAATGAGTAT+TGG | + | chr1.1:63514992-63515011 | MS.gene005416:CDS | 25.0% |
| !! | TTTCTTTTCTGTTCAACATA+TGG | + | chr1.1:63517270-63517289 | MS.gene005416:intron | 25.0% |
| !!! | AAATGTATTTTTACGGATCA+CGG | - | chr1.1:63516544-63516563 | None:intergenic | 25.0% |
| !!! | AATTTCAGTTTTTAAGAGAC+GGG | - | chr1.1:63515536-63515555 | None:intergenic | 25.0% |
| !!! | CAGTTCCTTGTTTTTTTAAT+TGG | + | chr1.1:63517514-63517533 | MS.gene005416:intron | 25.0% |
| !!! | CTGTAAGTTTTTCTAAAAAG+TGG | + | chr1.1:63516979-63516998 | MS.gene005416:intron | 25.0% |
| !!! | GAATTTTGATTTTGAATTGG+AGG | - | chr1.1:63513788-63513807 | None:intergenic | 25.0% |
| !!! | GCTTTTAAGTATTAGTAAAC+TGG | + | chr1.1:63516839-63516858 | MS.gene005416:CDS | 25.0% |
| !!! | TACTACGGATAATTTTGTTT+GGG | + | chr1.1:63517343-63517362 | MS.gene005416:intron | 25.0% |
| !!! | TAGTTGTTTTGTTTGGTTTT+TGG | + | chr1.1:63514669-63514688 | MS.gene005416:intron | 25.0% |
| AAACACTCAAACAATCAAAG+AGG | - | chr1.1:63517153-63517172 | None:intergenic | 30.0% | |
| AAACAGGACAATGAAAAAGT+TGG | - | chr1.1:63515303-63515322 | None:intergenic | 30.0% | |
| AAATGCCTCAACTTATATGA+TGG | - | chr1.1:63517912-63517931 | None:intergenic | 30.0% | |
| AAATTCAAACACCTAGCTAT+CGG | - | chr1.1:63514385-63514404 | None:intergenic | 30.0% | |
| AAGAGGAAAAATTGGAAGAA+AGG | - | chr1.1:63516240-63516259 | None:intergenic | 30.0% | |
| AATAGGGAAATGTGAAATCA+TGG | - | chr1.1:63517220-63517239 | None:intergenic | 30.0% | |
| ACTGATTGCAACAATTATGT+AGG | + | chr1.1:63516609-63516628 | MS.gene005416:intron | 30.0% | |
| AGAACATAAAAGTAGGTAGT+TGG | - | chr1.1:63515361-63515380 | None:intergenic | 30.0% | |
| AGAGATATTGAAATGTAGTC+AGG | - | chr1.1:63517938-63517957 | None:intergenic | 30.0% | |
| AGGATTTCAAGAGAAGATTT+GGG | - | chr1.1:63515933-63515952 | None:intergenic | 30.0% | |
| AGTATTAGTAAACTGGATAG+TGG | + | chr1.1:63516846-63516865 | MS.gene005416:CDS | 30.0% | |
| CACACATAACTCAAACTATA+GGG | + | chr1.1:63516178-63516197 | MS.gene005416:intron | 30.0% | |
| CGTATGGCTGTTAAAATATT+TGG | + | chr1.1:63517449-63517468 | MS.gene005416:intron | 30.0% | |
| CTTAAAAATACCGGATTTGA+GGG | + | chr1.1:63519041-63519060 | MS.gene005416:CDS | 30.0% | |
| CTTTGATAAAATCCCAGAAT+TGG | - | chr1.1:63518368-63518387 | None:intergenic | 30.0% | |
| GAAAAAATTGGTTACCAAAC+AGG | + | chr1.1:63514568-63514587 | MS.gene005416:intron | 30.0% | |
| GAACTAGGTTCCTTAAATAT+CGG | + | chr1.1:63517744-63517763 | MS.gene005416:intron | 30.0% | |
| GATATGAAATGAGACTTTAG+AGG | + | chr1.1:63516059-63516078 | MS.gene005416:intron | 30.0% | |
| GCAATTAAACAAAAGGCTTT+AGG | - | chr1.1:63518857-63518876 | None:intergenic | 30.0% | |
| GGTAATGATAGCATATTTGT+GGG | + | chr1.1:63518253-63518272 | MS.gene005416:intron | 30.0% | |
| GTGTTTGAATTTGTAGTGTT+TGG | + | chr1.1:63514393-63514412 | MS.gene005416:intron | 30.0% | |
| GTTCTACTCTTGAATTACAT+TGG | + | chr1.1:63518334-63518353 | MS.gene005416:CDS | 30.0% | |
| GTTGTTACTATTAATCAGCT+TGG | + | chr1.1:63514729-63514748 | MS.gene005416:intron | 30.0% | |
| GTTTGGTAAAATTAACGCTA+CGG | + | chr1.1:63514410-63514429 | MS.gene005416:intron | 30.0% | |
| TACTCTTGAATTACATTGGA+GGG | + | chr1.1:63518338-63518357 | MS.gene005416:CDS | 30.0% | |
| TAGGATTTCAAGAGAAGATT+TGG | - | chr1.1:63515934-63515953 | None:intergenic | 30.0% | |
| TATCAAGCATTCTGATCTAA+TGG | - | chr1.1:63518042-63518061 | None:intergenic | 30.0% | |
| TCACACATAACTCAAACTAT+AGG | + | chr1.1:63516177-63516196 | MS.gene005416:intron | 30.0% | |
| TCAGAAGGTTGAAAACTATT+AGG | - | chr1.1:63514096-63514115 | None:intergenic | 30.0% | |
| TCTTAAAAATACCGGATTTG+AGG | + | chr1.1:63519040-63519059 | MS.gene005416:CDS | 30.0% | |
| TGCTTGTCATCATTTATAAG+AGG | - | chr1.1:63516257-63516276 | None:intergenic | 30.0% | |
| TTAAAAATACCGGATTTGAG+GGG | + | chr1.1:63519042-63519061 | MS.gene005416:CDS | 30.0% | |
| TTAAAGCTTCATTCGTAATG+TGG | + | chr1.1:63514163-63514182 | MS.gene005416:intron | 30.0% | |
| TTAGAAAAACTTACAGACAG+TGG | - | chr1.1:63516975-63516994 | None:intergenic | 30.0% | |
| TTATAGCTTATAAGCTCGTA+TGG | - | chr1.1:63514604-63514623 | None:intergenic | 30.0% | |
| TTCAATAAGACAAATGACTC+AGG | - | chr1.1:63517055-63517074 | None:intergenic | 30.0% | |
| ! | AATGATTTTCATCAGAACTC+TGG | + | chr1.1:63518529-63518548 | MS.gene005416:intron | 30.0% |
| ! | ATTGATTAATTAGCTTCTGG+CGG | + | chr1.1:63514343-63514362 | MS.gene005416:intron | 30.0% |
| ! | ATTTTGTAGAATGCGAGATT+AGG | - | chr1.1:63515953-63515972 | None:intergenic | 30.0% |
| ! | CTACTACGGATAATTTTGTT+TGG | + | chr1.1:63517342-63517361 | MS.gene005416:intron | 30.0% |
| ! | CTGCATATTGTGTTAGTTTA+GGG | + | chr1.1:63515681-63515700 | MS.gene005416:intron | 30.0% |
| ! | GATATTTTGCCATAGTTGAT+GGG | + | chr1.1:63516579-63516598 | MS.gene005416:intron | 30.0% |
| ! | GCAATATTTCTATGTTCATG+CGG | + | chr1.1:63515610-63515629 | MS.gene005416:intron | 30.0% |
| ! | TAAGTATGAAAGCAGCTTTT+GGG | + | chr1.1:63516429-63516448 | MS.gene005416:CDS | 30.0% |
| ! | TATCCGTAGTAGTAAGTTTT+TGG | - | chr1.1:63517334-63517353 | None:intergenic | 30.0% |
| ! | TCTGCATATTGTGTTAGTTT+AGG | + | chr1.1:63515680-63515699 | MS.gene005416:intron | 30.0% |
| ! | TGGTAATGATAGCATATTTG+TGG | + | chr1.1:63518252-63518271 | MS.gene005416:intron | 30.0% |
| ! | TTAAGTATGAAAGCAGCTTT+TGG | + | chr1.1:63516428-63516447 | MS.gene005416:CDS | 30.0% |
| ! | TTAGGGCGTAATTACAATTT+TGG | + | chr1.1:63515698-63515717 | MS.gene005416:intron | 30.0% |
| ! | TTGATTCTGAAAACTGTCTA+TGG | - | chr1.1:63517402-63517421 | None:intergenic | 30.0% |
| ! | TTTTGTAAGTATACACGTCT+TGG | + | chr1.1:63517082-63517101 | MS.gene005416:intron | 30.0% |
| !! | AACTACCTACTTTTATGTTC+TGG | + | chr1.1:63515360-63515379 | MS.gene005416:intron | 30.0% |
| !! | AATGTATTTTTACGGATCAC+GGG | - | chr1.1:63516543-63516562 | None:intergenic | 30.0% |
| !! | ACTTAATTTTGAAGGATCAC+CGG | - | chr1.1:63516414-63516433 | None:intergenic | 30.0% |
| !! | AGACACTTAGTTGTTTTGTT+TGG | + | chr1.1:63514662-63514681 | MS.gene005416:intron | 30.0% |
| !! | AGATGCTTAGTTGTTTTGTT+TGG | + | chr1.1:63514695-63514714 | MS.gene005416:intron | 30.0% |
| !! | AGCTGATTTTTGTCATATAC+AGG | + | chr1.1:63516380-63516399 | MS.gene005416:intron | 30.0% |
| !! | ATAAGTGGCTACACTTTTTA+GGG | + | chr1.1:63515643-63515662 | MS.gene005416:intron | 30.0% |
| !! | ATCTTTGAAATCTTGGTCAA+AGG | + | chr1.1:63518634-63518653 | MS.gene005416:intron | 30.0% |
| !! | GAAGAGAATCTTTGAAATCT+TGG | + | chr1.1:63518627-63518646 | MS.gene005416:intron | 30.0% |
| !! | TTACGAATGAAGCTTTAAAG+AGG | - | chr1.1:63514161-63514180 | None:intergenic | 30.0% |
| !! | TTTGACTTAATGAGTATTGG+TGG | + | chr1.1:63514995-63515014 | MS.gene005416:CDS | 30.0% |
| !! | TTTGATTTTGAATTGGAGGA+GGG | - | chr1.1:63513784-63513803 | None:intergenic | 30.0% |
| !!! | ACATGTTGGTAATATGGTTT+TGG | + | chr1.1:63514841-63514860 | MS.gene005416:intron | 30.0% |
| !!! | CAATTCTGGGATTTTATCAA+AGG | + | chr1.1:63518366-63518385 | MS.gene005416:CDS | 30.0% |
| !!! | TTTGGTTGTTTTATTTGTGC+AGG | + | chr1.1:63514859-63514878 | MS.gene005416:intron | 30.0% |
| !!! | TTTTGATTTTGAATTGGAGG+AGG | - | chr1.1:63513785-63513804 | None:intergenic | 30.0% |
| AAAACTAAAGACCTGCAGTA+AGG | - | chr1.1:63517110-63517129 | None:intergenic | 35.0% | |
| AAATAAGGCGAAAGTGAAAG+AGG | + | chr1.1:63518453-63518472 | MS.gene005416:intron | 35.0% | |
| AACAACTGAGAGTGAAAAAC+AGG | - | chr1.1:63515319-63515338 | None:intergenic | 35.0% | |
| ACCACCTCAAAATCAAATTC+CGG | + | chr1.1:63513889-63513908 | MS.gene005416:CDS | 35.0% | |
| ACCCTATAACATTCAGTTCT+TGG | + | chr1.1:63515413-63515432 | MS.gene005416:intron | 35.0% | |
| ACTCTTGAATTACATTGGAG+GGG | + | chr1.1:63518339-63518358 | MS.gene005416:CDS | 35.0% | |
| AGATCAGAATGCTTGATAGA+TGG | + | chr1.1:63518044-63518063 | MS.gene005416:CDS | 35.0% | |
| AGCAGAAGCTATATAGAACT+AGG | + | chr1.1:63517729-63517748 | MS.gene005416:intron | 35.0% | |
| ATAATATTGACGAAGGTGAC+AGG | + | chr1.1:63515183-63515202 | MS.gene005416:intron | 35.0% | |
| ATCAAAAGAAAACACACTGG+AGG | - | chr1.1:63515064-63515083 | None:intergenic | 35.0% | |
| ATGAAATATATGGAACTGGC+AGG | + | chr1.1:63515118-63515137 | MS.gene005416:intron | 35.0% | |
| ATGACAAAAATCAGCTAAGC+AGG | - | chr1.1:63516376-63516395 | None:intergenic | 35.0% | |
| ATTTCTGAATGGCCAATTTC+TGG | + | chr1.1:63517875-63517894 | MS.gene005416:intron | 35.0% | |
| CAAAAAACCCGTAATGTTTC+CGG | + | chr1.1:63517686-63517705 | MS.gene005416:intron | 35.0% | |
| CAAAATGGTGGTAGCATTAT+TGG | + | chr1.1:63516470-63516489 | MS.gene005416:CDS | 35.0% | |
| CCAAAAAGCAGTTATCATGA+TGG | - | chr1.1:63515454-63515473 | None:intergenic | 35.0% | |
| CCTGAGCATTTGGATTTATA+AGG | - | chr1.1:63518929-63518948 | None:intergenic | 35.0% | |
| CCTTATAAATCCAAATGCTC+AGG | + | chr1.1:63518926-63518945 | MS.gene005416:CDS | 35.0% | |
| CTACTCTTGAATTACATTGG+AGG | + | chr1.1:63518337-63518356 | MS.gene005416:CDS | 35.0% | |
| CTAGATTTGTGTTGTGGAAT+GGG | + | chr1.1:63514930-63514949 | MS.gene005416:CDS | 35.0% | |
| CTATATAGCTTCTGCTATGT+AGG | - | chr1.1:63517725-63517744 | None:intergenic | 35.0% | |
| GCCAAGAACTGAATGTTATA+GGG | - | chr1.1:63515417-63515436 | None:intergenic | 35.0% | |
| GTAAACTAACCCATCAACTA+TGG | - | chr1.1:63516591-63516610 | None:intergenic | 35.0% | |
| GTAACAAGGTGAAGTTATCT+TGG | + | chr1.1:63516814-63516833 | MS.gene005416:CDS | 35.0% | |
| GTTACCAAACAGGTCTAATT+TGG | + | chr1.1:63514578-63514597 | MS.gene005416:intron | 35.0% | |
| TAATATTGACGAAGGTGACA+GGG | + | chr1.1:63515184-63515203 | MS.gene005416:intron | 35.0% | |
| TCAAAGAAAGGCAAATCAGT+TGG | - | chr1.1:63514980-63514999 | None:intergenic | 35.0% | |
| TCCGTCTGCAATTAAACAAA+AGG | - | chr1.1:63518864-63518883 | None:intergenic | 35.0% | |
| TGCAATTGTTTGAGCTGTTA+TGG | + | chr1.1:63518426-63518445 | MS.gene005416:intron | 35.0% | |
| TGCGGAATTTGTAACATAAG+TGG | + | chr1.1:63515628-63515647 | MS.gene005416:intron | 35.0% | |
| TGGTGAAACAACTAGAACAA+TGG | - | chr1.1:63516735-63516754 | None:intergenic | 35.0% | |
| TTAGTGATTAGCAGGTTCTA+GGG | + | chr1.1:63517372-63517391 | MS.gene005416:intron | 35.0% | |
| TTGATTACAACATACCACCA+TGG | - | chr1.1:63514130-63514149 | None:intergenic | 35.0% | |
| TTTAGGCTCTGTCAAAATAG+CGG | + | chr1.1:63514317-63514336 | MS.gene005416:intron | 35.0% | |
| TTTAGTGATTAGCAGGTTCT+AGG | + | chr1.1:63517371-63517390 | MS.gene005416:intron | 35.0% | |
| TTTGTTTAATTGCAGACGGA+GGG | + | chr1.1:63518864-63518883 | MS.gene005416:intron | 35.0% | |
| ! | ACTGGTTTCTTCAGACTTAT+AGG | - | chr1.1:63517478-63517497 | None:intergenic | 35.0% |
| ! | AGCTGTTATGGTGTCAAATA+AGG | + | chr1.1:63518438-63518457 | MS.gene005416:intron | 35.0% |
| ! | CATTTTGAGCTTATAGCAGA+TGG | - | chr1.1:63514628-63514647 | None:intergenic | 35.0% |
| ! | CTTCATCATGTCTTGATGAT+TGG | + | chr1.1:63518697-63518716 | MS.gene005416:intron | 35.0% |
| ! | GGATATTTTGCCATAGTTGA+TGG | + | chr1.1:63516578-63516597 | MS.gene005416:intron | 35.0% |
| ! | GTTTGAGTTATGTGTGACTT+TGG | - | chr1.1:63516174-63516193 | None:intergenic | 35.0% |
| ! | TCTAATGGCTTCTTTTGGAT+AGG | - | chr1.1:63518027-63518046 | None:intergenic | 35.0% |
| ! | TCTGATCTAATGGCTTCTTT+TGG | - | chr1.1:63518032-63518051 | None:intergenic | 35.0% |
| ! | TTGATAGATGGTGAGTTGAA+GGG | + | chr1.1:63518056-63518075 | MS.gene005416:CDS | 35.0% |
| ! | TTGATTTTGAATTGGAGGAG+GGG | - | chr1.1:63513783-63513802 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTTCGTTGTTGT+TGG | + | chr1.1:63518479-63518498 | MS.gene005416:intron | 35.0% |
| !! | AAGCTTTAAGCTACTTGAAG+TGG | + | chr1.1:63514499-63514518 | MS.gene005416:intron | 35.0% |
| !! | ATGTATTTTTACGGATCACG+GGG | - | chr1.1:63516542-63516561 | None:intergenic | 35.0% |
| !! | CATAAGTGGCTACACTTTTT+AGG | + | chr1.1:63515642-63515661 | MS.gene005416:intron | 35.0% |
| !! | CCATCATGATAACTGCTTTT+TGG | + | chr1.1:63515451-63515470 | MS.gene005416:intron | 35.0% |
| !! | GCCTTTTGTTTAATTGCAGA+CGG | + | chr1.1:63518860-63518879 | MS.gene005416:intron | 35.0% |
| !! | GTTTTATTATCCTCCAGTTG+CGG | + | chr1.1:63517989-63518008 | MS.gene005416:CDS | 35.0% |
| !! | TACCTACTTTTATGTTCTGG+CGG | + | chr1.1:63515363-63515382 | MS.gene005416:intron | 35.0% |
| !! | TCTGGGATTTTATCAAAGGT+AGG | + | chr1.1:63518370-63518389 | MS.gene005416:intron | 35.0% |
| !! | TTTGAAGGACGATCTTGTTT+TGG | + | chr1.1:63514892-63514911 | MS.gene005416:CDS | 35.0% |
| !! | TTTTGTTTAATTGCAGACGG+AGG | + | chr1.1:63518863-63518882 | MS.gene005416:intron | 35.0% |
| !!! | ATGTGTTGTGTAGTTTTGGA+AGG | + | chr1.1:63518227-63518246 | MS.gene005416:intron | 35.0% |
| !!! | ATTACGGGTTTTTTGCATAC+AGG | - | chr1.1:63517681-63517700 | None:intergenic | 35.0% |
| !!! | GATTTTGAGGTGGTTTTAGT+CGG | - | chr1.1:63513883-63513902 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTTAGTGATTAGC+AGG | + | chr1.1:63517364-63517383 | MS.gene005416:intron | 35.0% |
| !!! | GTCTCTGTAGTTTTTTTCGA+GGG | - | chr1.1:63516152-63516171 | None:intergenic | 35.0% |
| !!! | TTGAAGGACGATCTTGTTTT+GGG | + | chr1.1:63514893-63514912 | MS.gene005416:CDS | 35.0% |
| !!! | TTGTGTAGTTTTGGAAGGTA+TGG | + | chr1.1:63518232-63518251 | MS.gene005416:intron | 35.0% |
| AAAAGAAAACACACTGGAGG+AGG | - | chr1.1:63515061-63515080 | None:intergenic | 40.0% | |
| AAAGTAGGTAGTTGGCTGAA+AGG | - | chr1.1:63515353-63515372 | None:intergenic | 40.0% | |
| AACACAAATCTAGGTGCATC+AGG | - | chr1.1:63514923-63514942 | None:intergenic | 40.0% | |
| AACACTTGAAACAAGGTCAC+TGG | - | chr1.1:63518564-63518583 | None:intergenic | 40.0% | |
| AACATCACCAACGTGAATAC+TGG | - | chr1.1:63516755-63516774 | None:intergenic | 40.0% | |
| AAGAACTGTGGAATAGCTTG+AGG | - | chr1.1:63518981-63519000 | None:intergenic | 40.0% | |
| AATGGTGGTAGCATTATTGG+TGG | + | chr1.1:63516473-63516492 | MS.gene005416:CDS | 40.0% | |
| ACAATTGGATCCTGAGCATT+TGG | - | chr1.1:63518939-63518958 | None:intergenic | 40.0% | |
| ACTCTAACCCCCAAAACAAT+TGG | - | chr1.1:63518954-63518973 | None:intergenic | 40.0% | |
| ACTGGCAGGATAAATAATGC+AGG | + | chr1.1:63515132-63515151 | MS.gene005416:intron | 40.0% | |
| AGAAATTGCGTTTGGCAACA+TGG | - | chr1.1:63516687-63516706 | None:intergenic | 40.0% | |
| AGAGCCTAAATACACATTCG+AGG | - | chr1.1:63514307-63514326 | None:intergenic | 40.0% | |
| AGATGTCCAACTAAGAACTG+TGG | - | chr1.1:63518993-63519012 | None:intergenic | 40.0% | |
| AGCATATTTGTGGGTTTGAC+AGG | + | chr1.1:63518262-63518281 | MS.gene005416:intron | 40.0% | |
| AGTCGCCATCATATAAGTTG+AGG | + | chr1.1:63517904-63517923 | MS.gene005416:intron | 40.0% | |
| ATGCACCTAGATTTGTGTTG+TGG | + | chr1.1:63514924-63514943 | MS.gene005416:CDS | 40.0% | |
| ATGGCCAAATTAGACCTGTT+TGG | - | chr1.1:63514585-63514604 | None:intergenic | 40.0% | |
| ATTATTACCGTGGAGAGAGA+TGG | + | chr1.1:63514051-63514070 | MS.gene005416:CDS | 40.0% | |
| CAAAGAAACAACTCCTTCTG+GGG | - | chr1.1:63516895-63516914 | None:intergenic | 40.0% | |
| CAGGACAATGAAAAAGTTGG+TGG | - | chr1.1:63515300-63515319 | None:intergenic | 40.0% | |
| CAGTCAGGCACAAATAAACA+AGG | - | chr1.1:63517559-63517578 | None:intergenic | 40.0% | |
| CCATATTACCAACATGTGTG+AGG | - | chr1.1:63514838-63514857 | None:intergenic | 40.0% | |
| CCATTCCACAACACAAATCT+AGG | - | chr1.1:63514932-63514951 | None:intergenic | 40.0% | |
| CCTAGATTTGTGTTGTGGAA+TGG | + | chr1.1:63514929-63514948 | MS.gene005416:CDS | 40.0% | |
| CGCCAAGAACTGAATGTTAT+AGG | - | chr1.1:63515418-63515437 | None:intergenic | 40.0% | |
| CTGAACAAAAAGGCTCTATC+AGG | - | chr1.1:63515270-63515289 | None:intergenic | 40.0% | |
| CTTCTGCTATGTAGGATCTA+AGG | - | chr1.1:63517717-63517736 | None:intergenic | 40.0% | |
| CTTTCTACAAAGCATGCTGA+TGG | + | chr1.1:63513979-63513998 | MS.gene005416:CDS | 40.0% | |
| GCAAAGAAACAACTCCTTCT+GGG | - | chr1.1:63516896-63516915 | None:intergenic | 40.0% | |
| GCTATGTAGGATCTAAGGAA+TGG | - | chr1.1:63517712-63517731 | None:intergenic | 40.0% | |
| GCTATTCCACAGTTCTTAGT+TGG | + | chr1.1:63518984-63519003 | MS.gene005416:CDS | 40.0% | |
| GGGATCAAAAGAAAACACAC+TGG | - | chr1.1:63515067-63515086 | None:intergenic | 40.0% | |
| GGTTGTTTACTTCAAAGCCA+GGG | + | chr1.1:63517765-63517784 | MS.gene005416:intron | 40.0% | |
| GTCAAACTGTTGGATCATTC+CGG | + | chr1.1:63516651-63516670 | MS.gene005416:CDS | 40.0% | |
| GTTATGTAGTTGTAGTGCAG+TGG | + | chr1.1:63517628-63517647 | MS.gene005416:intron | 40.0% | |
| GTTTCCAACAACAACGAAGA+AGG | - | chr1.1:63518486-63518505 | None:intergenic | 40.0% | |
| TACCTAATGTTTGCACTCCT+TGG | - | chr1.1:63518106-63518125 | None:intergenic | 40.0% | |
| TACCTAGCAGAAATTGCGTT+TGG | - | chr1.1:63516695-63516714 | None:intergenic | 40.0% | |
| TAGTCGTTCTTTACTATCCC+TGG | - | chr1.1:63518510-63518529 | None:intergenic | 40.0% | |
| TATCAGGCGTTCAAAAACCT+CGG | - | chr1.1:63515254-63515273 | None:intergenic | 40.0% | |
| TATTACCAACATGTGTGAGG+CGG | - | chr1.1:63514835-63514854 | None:intergenic | 40.0% | |
| TCAGTTCTTGGCGAATGAAA+TGG | + | chr1.1:63515425-63515444 | MS.gene005416:intron | 40.0% | |
| TCATATACAGGTGTCTATGC+CGG | + | chr1.1:63516392-63516411 | MS.gene005416:intron | 40.0% | |
| TCTCTCCTGTATTGCTTTGA+AGG | - | chr1.1:63516501-63516520 | None:intergenic | 40.0% | |
| TGCAAAGAAACAACTCCTTC+TGG | - | chr1.1:63516897-63516916 | None:intergenic | 40.0% | |
| TGGTCCTCGAATGTGTATTT+AGG | + | chr1.1:63514300-63514319 | MS.gene005416:intron | 40.0% | |
| TGGTGGGAATATTATTACCG+TGG | + | chr1.1:63514041-63514060 | MS.gene005416:CDS | 40.0% | |
| TGTTGTGGAATGGGAAATTG+AGG | + | chr1.1:63514939-63514958 | MS.gene005416:CDS | 40.0% | |
| TGTTTCACCAGTATTCACGT+TGG | + | chr1.1:63516745-63516764 | MS.gene005416:intron | 40.0% | |
| TTACAGGAACACGATTCACT+AGG | - | chr1.1:63516778-63516797 | None:intergenic | 40.0% | |
| TTATTACCGTGGAGAGAGAT+GGG | + | chr1.1:63514052-63514071 | MS.gene005416:CDS | 40.0% | |
| ! | AACAAATGAAAAGGAGCGCA+AGG | - | chr1.1:63515816-63515835 | None:intergenic | 40.0% |
| ! | CATCATGTCTTGATGATTGG+TGG | + | chr1.1:63518700-63518719 | MS.gene005416:intron | 40.0% |
| ! | CTGATAGAGCCTTTTTGTTC+AGG | + | chr1.1:63515268-63515287 | MS.gene005416:CDS | 40.0% |
| ! | CTTGATAGATGGTGAGTTGA+AGG | + | chr1.1:63518055-63518074 | MS.gene005416:CDS | 40.0% |
| ! | GATTTGGTCAATTGCATCCA+CGG | + | chr1.1:63518078-63518097 | MS.gene005416:CDS | 40.0% |
| ! | GCTCAGGATCCAATTGTTTT+GGG | + | chr1.1:63518942-63518961 | MS.gene005416:CDS | 40.0% |
| ! | GCTTGAGCTATGTGTGATTT+TGG | + | chr1.1:63515729-63515748 | MS.gene005416:intron | 40.0% |
| ! | GGCTTCTTTTGGATAGGAAA+TGG | - | chr1.1:63518021-63518040 | None:intergenic | 40.0% |
| ! | TCTTGATGATTGGTGGTTCT+GGG | + | chr1.1:63518707-63518726 | MS.gene005416:intron | 40.0% |
| ! | TGCTCAGGATCCAATTGTTT+TGG | + | chr1.1:63518941-63518960 | MS.gene005416:CDS | 40.0% |
| !! | CAGTTTTTAAGAGACGGGTT+GGG | - | chr1.1:63515531-63515550 | None:intergenic | 40.0% |
| !! | CCTCACACATGTTGGTAATA+TGG | + | chr1.1:63514835-63514854 | MS.gene005416:intron | 40.0% |
| !! | CTCAGGATCCAATTGTTTTG+GGG | + | chr1.1:63518943-63518962 | MS.gene005416:CDS | 40.0% |
| !! | CTCTCCGGAATTTGATTTTG+AGG | - | chr1.1:63513896-63513915 | None:intergenic | 40.0% |
| !! | CTTCCATAGAAGAGTACTAC+AGG | + | chr1.1:63518663-63518682 | MS.gene005416:intron | 40.0% |
| !! | TCAGTTTTTAAGAGACGGGT+TGG | - | chr1.1:63515532-63515551 | None:intergenic | 40.0% |
| !! | TCCGGAATTTGATTTTGAGG+TGG | - | chr1.1:63513893-63513912 | None:intergenic | 40.0% |
| !!! | AGTTTTTAAGAGACGGGTTG+GGG | - | chr1.1:63515530-63515549 | None:intergenic | 40.0% |
| !!! | GGTCTCTGTAGTTTTTTTCG+AGG | - | chr1.1:63516153-63516172 | None:intergenic | 40.0% |
| !!! | GGTTGTTTTATTTGTGCAGG+TGG | + | chr1.1:63514862-63514881 | MS.gene005416:intron | 40.0% |
| !!! | TCAGGATCCAATTGTTTTGG+GGG | + | chr1.1:63518944-63518963 | MS.gene005416:CDS | 40.0% |
| AACTGTTGGATCATTCCGGA+AGG | + | chr1.1:63516655-63516674 | MS.gene005416:CDS | 45.0% | |
| AAGAAACCCATCTCTCTCCA+CGG | - | chr1.1:63514061-63514080 | None:intergenic | 45.0% | |
| AAGCCAAAGCCTATCTCACA+AGG | - | chr1.1:63517814-63517833 | None:intergenic | 45.0% | |
| AAGCCAAAGGGTCAAACTGT+TGG | + | chr1.1:63516641-63516660 | MS.gene005416:CDS | 45.0% | |
| AATCGCGTGGCAACTTAAAG+TGG | - | chr1.1:63518166-63518185 | None:intergenic | 45.0% | |
| ACTAGCAACATGGGAAGGAA+TGG | - | chr1.1:63516940-63516959 | None:intergenic | 45.0% | |
| ACTGTTGGATCATTCCGGAA+GGG | + | chr1.1:63516656-63516675 | MS.gene005416:CDS | 45.0% | |
| AGATAAGCTAGCCGATAGCT+AGG | + | chr1.1:63514371-63514390 | MS.gene005416:intron | 45.0% | |
| AGCCAAAGCCTATCTCACAA+GGG | - | chr1.1:63517813-63517832 | None:intergenic | 45.0% | |
| AGGAATGGCCGGAAACATTA+CGG | - | chr1.1:63517697-63517716 | None:intergenic | 45.0% | |
| AGTTCGTGCGTCGAAATCTT+GGG | + | chr1.1:63515227-63515246 | MS.gene005416:CDS | 45.0% | |
| ATCCCTTGTGAGATAGGCTT+TGG | + | chr1.1:63517808-63517827 | MS.gene005416:intron | 45.0% | |
| ATCGTGTTCCTGTAACCTGT+TGG | + | chr1.1:63516783-63516802 | MS.gene005416:intron | 45.0% | |
| ATGGTGAGCATAGGATCAGA+AGG | - | chr1.1:63514111-63514130 | None:intergenic | 45.0% | |
| CATCACATCCCTTGTGAGAT+AGG | + | chr1.1:63517802-63517821 | MS.gene005416:intron | 45.0% | |
| CCTCGGTAACAACAACATTG+GGG | - | chr1.1:63514008-63514027 | None:intergenic | 45.0% | |
| CGGTTGTTTACTTCAAAGCC+AGG | + | chr1.1:63517764-63517783 | MS.gene005416:intron | 45.0% | |
| CTCCGCCAGAACATAAAAGT+AGG | - | chr1.1:63515368-63515387 | None:intergenic | 45.0% | |
| GACATGATGAAGCAGTACAG+CGG | - | chr1.1:63518689-63518708 | None:intergenic | 45.0% | |
| GATCCAACAGTTTGACCCTT+TGG | - | chr1.1:63516647-63516666 | None:intergenic | 45.0% | |
| GCCTCGGTAACAACAACATT+GGG | - | chr1.1:63514009-63514028 | None:intergenic | 45.0% | |
| GCGACTATCATGCCAGAAAT+TGG | - | chr1.1:63517890-63517909 | None:intergenic | 45.0% | |
| TACTTCAAAGCCAGGGTTTC+AGG | + | chr1.1:63517772-63517791 | MS.gene005416:intron | 45.0% | |
| TACTTCAGCTGCTATCTCGT+AGG | - | chr1.1:63519126-63519145 | None:intergenic | 45.0% | |
| TGCCAAACGCAATTTCTGCT+AGG | + | chr1.1:63516690-63516709 | MS.gene005416:CDS | 45.0% | |
| TGGAGCCTTCAAAGCAATAC+AGG | + | chr1.1:63516493-63516512 | MS.gene005416:CDS | 45.0% | |
| TGTAGGATCTAAGGAATGGC+CGG | - | chr1.1:63517708-63517727 | None:intergenic | 45.0% | |
| TGTTGGCAGGTTAGGTAACA+AGG | + | chr1.1:63516800-63516819 | MS.gene005416:intron | 45.0% | |
| TTATTTGTGCAGGTGGACAG+TGG | + | chr1.1:63514869-63514888 | MS.gene005416:intron | 45.0% | |
| TTCAAGAGTAGAACCCTTCC+AGG | - | chr1.1:63518328-63518347 | None:intergenic | 45.0% | |
| TTCTGATCCTATGCTCACCA+TGG | + | chr1.1:63514110-63514129 | MS.gene005416:CDS | 45.0% | |
| TTGAATTGGAGGAGGGGAAA+GGG | - | chr1.1:63513777-63513796 | None:intergenic | 45.0% | |
| TTGACGTATGAAACCCCAGA+AGG | + | chr1.1:63516879-63516898 | MS.gene005416:CDS | 45.0% | |
| TTGTTACCTAACCTGCCAAC+AGG | - | chr1.1:63516801-63516820 | None:intergenic | 45.0% | |
| TTTGAATTGGAGGAGGGGAA+AGG | - | chr1.1:63513778-63513797 | None:intergenic | 45.0% | |
| ! | ACAGTTTGACCCTTTGGCTT+TGG | - | chr1.1:63516641-63516660 | None:intergenic | 45.0% |
| ! | AGCCAAGGAGTGCAAACATT+AGG | + | chr1.1:63518101-63518120 | MS.gene005416:CDS | 45.0% |
| ! | CGTTGTTGTTGGAAACTCCA+GGG | + | chr1.1:63518490-63518509 | MS.gene005416:intron | 45.0% |
| ! | GAAGTAAGCTTGTCGCTTCT+TGG | - | chr1.1:63516286-63516305 | None:intergenic | 45.0% |
| ! | GATGGGTTTCTTTGGGAAGA+AGG | + | chr1.1:63514069-63514088 | MS.gene005416:CDS | 45.0% |
| ! | GATGGTGAGTTGAAGGGATT+TGG | + | chr1.1:63518062-63518081 | MS.gene005416:CDS | 45.0% |
| ! | GGAGAGAGATGGGTTTCTTT+GGG | + | chr1.1:63514062-63514081 | MS.gene005416:CDS | 45.0% |
| ! | GTCTTGATGATTGGTGGTTC+TGG | + | chr1.1:63518706-63518725 | MS.gene005416:intron | 45.0% |
| ! | TCGTTGTTGTTGGAAACTCC+AGG | + | chr1.1:63518489-63518508 | MS.gene005416:intron | 45.0% |
| ! | TGGAGAGAGATGGGTTTCTT+TGG | + | chr1.1:63514061-63514080 | MS.gene005416:CDS | 45.0% |
| !! | AAGCAGCTTTTGGGAAAGTG+TGG | + | chr1.1:63516438-63516457 | MS.gene005416:CDS | 45.0% |
| !! | AATGGACTAGCAACATGGGA+AGG | - | chr1.1:63516945-63516964 | None:intergenic | 45.0% |
| !! | CAGCAATGGACTAGCAACAT+GGG | - | chr1.1:63516949-63516968 | None:intergenic | 45.0% |
| !! | CAGTGGACTATGTATTGCTC+AGG | + | chr1.1:63513954-63513973 | MS.gene005416:CDS | 45.0% |
| !! | GAGTATTGGTGGCAAGATCA+GGG | + | chr1.1:63515006-63515025 | MS.gene005416:CDS | 45.0% |
| !! | TATGTGTCTGGTGTTGCCTT+GGG | + | chr1.1:63519083-63519102 | MS.gene005416:CDS | 45.0% |
| !! | TATTTTTACGGATCACGGGG+TGG | - | chr1.1:63516539-63516558 | None:intergenic | 45.0% |
| !! | TGAGTATTGGTGGCAAGATC+AGG | + | chr1.1:63515005-63515024 | MS.gene005416:CDS | 45.0% |
| !! | TGGCTCTGACCTGAACAAAA+AGG | - | chr1.1:63515280-63515299 | None:intergenic | 45.0% |
| !!! | GATTGGTGGTTCTGGGTTTT+AGG | + | chr1.1:63518714-63518733 | MS.gene005416:intron | 45.0% |
| !!! | GTTTTTAAGAGACGGGTTGG+GGG | - | chr1.1:63515529-63515548 | None:intergenic | 45.0% |
| !!! | TTGTTTTGGGGGTTAGAGTG+TGG | + | chr1.1:63518955-63518974 | MS.gene005416:CDS | 45.0% |
| !!! | ATTTTTTTTTTAAATTAAGT+TGG | - | chr1.1:63515910-63515929 | None:intergenic | 5.0% |
| !!! | TGATTAATATTTAAAATAAA+GGG | + | chr1.1:63516118-63516137 | MS.gene005416:intron | 5.0% |
| !!! | TTGATTAATATTTAAAATAA+AGG | + | chr1.1:63516117-63516136 | MS.gene005416:intron | 5.0% |
| !!! | TTTTAAATATTAATCAAATA+TGG | - | chr1.1:63516114-63516133 | None:intergenic | 5.0% |
| !!! | TTTTCTAAAAAAAAAAAATA+TGG | + | chr1.1:63515588-63515607 | MS.gene005416:intron | 5.0% |
| AAACAAGGTCACTGGACGTC+TGG | - | chr1.1:63518556-63518575 | None:intergenic | 50.0% | |
| AAAGCCAGGGTTTCAGGATC+AGG | + | chr1.1:63517778-63517797 | MS.gene005416:intron | 50.0% | |
| AAATATCCGGCGCTCAACGA+TGG | - | chr1.1:63516038-63516057 | None:intergenic | 50.0% | |
| AAGAGTAGAACCCTTCCAGG+TGG | - | chr1.1:63518325-63518344 | None:intergenic | 50.0% | |
| AAGGAACAGCCCCTCAAATC+CGG | - | chr1.1:63519054-63519073 | None:intergenic | 50.0% | |
| ACAGACAGTGGTTGCAGCAA+TGG | - | chr1.1:63516963-63516982 | None:intergenic | 50.0% | |
| ACCAACAACCACACAGTCGA+CGG | - | chr1.1:63513926-63513945 | None:intergenic | 50.0% | |
| ACCAACTCGATCTTTCGCCT+CGG | - | chr1.1:63514025-63514044 | None:intergenic | 50.0% | |
| ACGTCTTGGTACCTTACTGC+AGG | + | chr1.1:63517096-63517115 | MS.gene005416:intron | 50.0% | |
| AGAAAACACACTGGAGGAGG+AGG | - | chr1.1:63515058-63515077 | None:intergenic | 50.0% | |
| ATGTCCTGATCCTGAAACCC+TGG | - | chr1.1:63517785-63517804 | None:intergenic | 50.0% | |
| ATTCCTCCGCAATGGAGCAA+CGG | - | chr1.1:63513849-63513868 | None:intergenic | 50.0% | |
| ATTGGAGGGGCTACCAATTC+TGG | + | chr1.1:63518352-63518371 | MS.gene005416:CDS | 50.0% | |
| ATTTGAGGGGCTGTTCCTTG+GGG | + | chr1.1:63519055-63519074 | MS.gene005416:CDS | 50.0% | |
| CATACCACCATGGTGAGCAT+AGG | - | chr1.1:63514120-63514139 | None:intergenic | 50.0% | |
| CGCCTCGGTAACAACAACAT+TGG | - | chr1.1:63514010-63514029 | None:intergenic | 50.0% | |
| CGGCCTGTAGTACTCTTCTA+TGG | - | chr1.1:63518669-63518688 | None:intergenic | 50.0% | |
| CGTAATGTGGCGCATGCAAT+TGG | + | chr1.1:63514176-63514195 | MS.gene005416:intron | 50.0% | |
| CTAACCTGCCAACAGGTTAC+AGG | - | chr1.1:63516794-63516813 | None:intergenic | 50.0% | |
| CTGTAACCTGTTGGCAGGTT+AGG | + | chr1.1:63516792-63516811 | MS.gene005416:intron | 50.0% | |
| GAAAACACACTGGAGGAGGA+GGG | - | chr1.1:63515057-63515076 | None:intergenic | 50.0% | |
| GAGTTCGTGCGTCGAAATCT+TGG | + | chr1.1:63515226-63515245 | MS.gene005416:CDS | 50.0% | |
| GATTTGAGGGGCTGTTCCTT+GGG | + | chr1.1:63519054-63519073 | MS.gene005416:CDS | 50.0% | |
| GCAACATGGTAAGTCCCTTC+CGG | - | chr1.1:63516673-63516692 | None:intergenic | 50.0% | |
| GGAAAGGGGAATGGAGATGA+GGG | - | chr1.1:63513762-63513781 | None:intergenic | 50.0% | |
| GGAATGGCCGGAAACATTAC+GGG | - | chr1.1:63517696-63517715 | None:intergenic | 50.0% | |
| GTGACAGGGTCATGAGGAAT+CGG | + | chr1.1:63515198-63515217 | MS.gene005416:intron | 50.0% | |
| GTGGAATGGGAAATTGAGGC+CGG | + | chr1.1:63514943-63514962 | MS.gene005416:CDS | 50.0% | |
| GTGTGGAGGCTCGAACAAAA+TGG | + | chr1.1:63516455-63516474 | MS.gene005416:CDS | 50.0% | |
| GTTCGTGCGTCGAAATCTTG+GGG | + | chr1.1:63515228-63515247 | MS.gene005416:CDS | 50.0% | |
| TCAAATCCATCGTTGAGCGC+CGG | + | chr1.1:63516029-63516048 | MS.gene005416:intron | 50.0% | |
| TGAATTGGAGGAGGGGAAAG+GGG | - | chr1.1:63513776-63513795 | None:intergenic | 50.0% | |
| TGATCCTATGCTCACCATGG+TGG | + | chr1.1:63514113-63514132 | MS.gene005416:CDS | 50.0% | |
| TGGAGGCTCGAACAAAATGG+TGG | + | chr1.1:63516458-63516477 | MS.gene005416:CDS | 50.0% | |
| TGGTGCTCGGTTAGGGAAAA+GGG | - | chr1.1:63518305-63518324 | None:intergenic | 50.0% | |
| TGTTCCTGTAACCTGTTGGC+AGG | + | chr1.1:63516787-63516806 | MS.gene005416:intron | 50.0% | |
| TTGGAGGGGCTACCAATTCT+GGG | + | chr1.1:63518353-63518372 | MS.gene005416:CDS | 50.0% | |
| ! | CCCCAATGTTGTTGTTACCG+AGG | + | chr1.1:63514005-63514024 | MS.gene005416:CDS | 50.0% |
| !! | AGGCGAAAGATCGAGTTGGT+GGG | + | chr1.1:63514025-63514044 | MS.gene005416:CDS | 50.0% |
| !! | CAGCTTTTGGGAAAGTGTGG+AGG | + | chr1.1:63516441-63516460 | MS.gene005416:CDS | 50.0% |
| !! | CTATGTGTCTGGTGTTGCCT+TGG | + | chr1.1:63519082-63519101 | MS.gene005416:CDS | 50.0% |
| !! | GCAGCAATGGACTAGCAACA+TGG | - | chr1.1:63516950-63516969 | None:intergenic | 50.0% |
| !! | GGCAAATCAGTTGGCTTTCC+CGG | - | chr1.1:63514971-63514990 | None:intergenic | 50.0% |
| !!! | GGTGGTTTTAGTCGGAGATG+CGG | - | chr1.1:63513875-63513894 | None:intergenic | 50.0% |
| AACCACACAGTCGACGGATG+AGG | - | chr1.1:63513920-63513939 | None:intergenic | 55.0% | |
| AAGGGGAATGGAGATGAGGG+CGG | - | chr1.1:63513759-63513778 | None:intergenic | 55.0% | |
| AATGGAGATGAGGGCGGAGA+AGG | - | chr1.1:63513753-63513772 | None:intergenic | 55.0% | |
| ACCGAGGCGAAAGATCGAGT+TGG | + | chr1.1:63514021-63514040 | MS.gene005416:CDS | 55.0% | |
| ACGAAGGTGACAGGGTCATG+AGG | + | chr1.1:63515192-63515211 | MS.gene005416:intron | 55.0% | |
| AGCAACGGAGACGGAGAATG+GGG | - | chr1.1:63513834-63513853 | None:intergenic | 55.0% | |
| AGGCGTCTGCCAAAGCCAAA+GGG | + | chr1.1:63516629-63516648 | MS.gene005416:intron | 55.0% | |
| ATGGAGATGAGGGCGGAGAA+GGG | - | chr1.1:63513752-63513771 | None:intergenic | 55.0% | |
| CAATTGCATCCACGGAGCCA+AGG | + | chr1.1:63518086-63518105 | MS.gene005416:CDS | 55.0% | |
| CAGACACATAGTTGCCCCCA+AGG | - | chr1.1:63519073-63519092 | None:intergenic | 55.0% | |
| CAGCCATACGCTCTTGCAGT+AGG | - | chr1.1:63517439-63517458 | None:intergenic | 55.0% | |
| CTTGGGGGCAACTATGTGTC+TGG | + | chr1.1:63519071-63519090 | MS.gene005416:CDS | 55.0% | |
| GAGCAACGGAGACGGAGAAT+GGG | - | chr1.1:63513835-63513854 | None:intergenic | 55.0% | |
| GCAGGTGGACAGTGGTTTGA+AGG | + | chr1.1:63514877-63514896 | MS.gene005416:intron | 55.0% | |
| GGAGAAGGGTTTGAGAGGGT+GGG | - | chr1.1:63513738-63513757 | None:intergenic | 55.0% | |
| GGAGACGGAGAATGGGGTTA+TGG | - | chr1.1:63513828-63513847 | None:intergenic | 55.0% | |
| GGATTTGAGGGGCTGTTCCT+TGG | + | chr1.1:63519053-63519072 | MS.gene005416:CDS | 55.0% | |
| GGGAAAGGGGAATGGAGATG+AGG | - | chr1.1:63513763-63513782 | None:intergenic | 55.0% | |
| GGTTTGAGAGGGTGGGAAGA+AGG | - | chr1.1:63513731-63513750 | None:intergenic | 55.0% | |
| GTCGACTGTGTGGTTGTTGG+TGG | + | chr1.1:63513925-63513944 | MS.gene005416:CDS | 55.0% | |
| GTGGTGCTCGGTTAGGGAAA+AGG | - | chr1.1:63518306-63518325 | None:intergenic | 55.0% | |
| TAACCGAGCACCACCTGGAA+GGG | + | chr1.1:63518312-63518331 | MS.gene005416:CDS | 55.0% | |
| TAGGCGTCTGCCAAAGCCAA+AGG | + | chr1.1:63516628-63516647 | MS.gene005416:intron | 55.0% | |
| TCCCTCAACACACCTTCCCA+AGG | - | chr1.1:63519102-63519121 | None:intergenic | 55.0% | |
| TGACACCGCCTCACACATGT+TGG | + | chr1.1:63514827-63514846 | MS.gene005416:intron | 55.0% | |
| TTCCAGGTGGTGCTCGGTTA+GGG | - | chr1.1:63518312-63518331 | None:intergenic | 55.0% | |
| TTTGAGGGGCTGTTCCTTGG+GGG | + | chr1.1:63519056-63519075 | MS.gene005416:CDS | 55.0% | |
| ! | ATTGGTGGCAAGATCAGGGC+TGG | + | chr1.1:63515010-63515029 | MS.gene005416:CDS | 55.0% |
| ! | GAAAGTGCATCTGCAGCAGC+AGG | - | chr1.1:63517966-63517985 | None:intergenic | 55.0% |
| ! | GACTGTGTGGTTGTTGGTGG+TGG | + | chr1.1:63513928-63513947 | MS.gene005416:CDS | 55.0% |
| ! | GCCTTGGGAAGGTGTGTTGA+GGG | + | chr1.1:63519098-63519117 | MS.gene005416:CDS | 55.0% |
| ! | TCCGTCGACTGTGTGGTTGT+TGG | + | chr1.1:63513922-63513941 | MS.gene005416:CDS | 55.0% |
| ! | TGCCTTGGGAAGGTGTGTTG+AGG | + | chr1.1:63519097-63519116 | MS.gene005416:CDS | 55.0% |
| ! | TGGCCTACTGCAAGAGCGTA+TGG | + | chr1.1:63517433-63517452 | MS.gene005416:intron | 55.0% |
| !! | GAGGCGAAAGATCGAGTTGG+TGG | + | chr1.1:63514024-63514043 | MS.gene005416:CDS | 55.0% |
| !! | GGTTTTAGTCGGAGATGCGG+TGG | - | chr1.1:63513872-63513891 | None:intergenic | 55.0% |
| !! | GTTGTTGGTGGTGGCATCAG+TGG | + | chr1.1:63513937-63513956 | MS.gene005416:CDS | 55.0% |
| !! | TGTCTGGTGTTGCCTTGGGA+AGG | + | chr1.1:63519087-63519106 | MS.gene005416:CDS | 55.0% |
| !! | TTAAGAGACGGGTTGGGGGA+TGG | - | chr1.1:63515525-63515544 | None:intergenic | 55.0% |
| AGGGCGGAGAAGGGTTTGAG+AGG | - | chr1.1:63513743-63513762 | None:intergenic | 60.0% | |
| CCGCAATGGAGCAACGGAGA+CGG | - | chr1.1:63513843-63513862 | None:intergenic | 60.0% | |
| CCGTCTCCGTTGCTCCATTG+CGG | + | chr1.1:63513840-63513859 | MS.gene005416:CDS | 60.0% | |
| CGGAGAAGGGTTTGAGAGGG+TGG | - | chr1.1:63513739-63513758 | None:intergenic | 60.0% | |
| CTAACCGAGCACCACCTGGA+AGG | + | chr1.1:63518311-63518330 | MS.gene005416:CDS | 60.0% | |
| CTTCCAGGTGGTGCTCGGTT+AGG | - | chr1.1:63518313-63518332 | None:intergenic | 60.0% | |
| GAACCCTTCCAGGTGGTGCT+CGG | - | chr1.1:63518318-63518337 | None:intergenic | 60.0% | |
| GGAGCAACGGAGACGGAGAA+TGG | - | chr1.1:63513836-63513855 | None:intergenic | 60.0% | |
| GGGCGGAGAAGGGTTTGAGA+GGG | - | chr1.1:63513742-63513761 | None:intergenic | 60.0% | |
| GTCGACGGATGAGGACTCTC+CGG | - | chr1.1:63513911-63513930 | None:intergenic | 60.0% | |
| GTTTGCACTCCTTGGCTCCG+TGG | - | chr1.1:63518098-63518117 | None:intergenic | 60.0% | |
| TCTCCGTTGCTCCATTGCGG+AGG | + | chr1.1:63513843-63513862 | MS.gene005416:CDS | 60.0% | |
| TGGAGGAGGGGAAAGGGGAA+TGG | - | chr1.1:63513771-63513790 | None:intergenic | 60.0% | |
| TGGGAAATTGAGGCCGGTGC+CGG | + | chr1.1:63514949-63514968 | MS.gene005416:CDS | 60.0% | |
| TTCCCTAACCGAGCACCACC+TGG | + | chr1.1:63518307-63518326 | MS.gene005416:CDS | 60.0% | |
| ! | GTCCTCATCCGTCGACTGTG+TGG | + | chr1.1:63513915-63513934 | MS.gene005416:CDS | 60.0% |
| ! | TGCGGTGGATTCCTCCGCAA+TGG | - | chr1.1:63513857-63513876 | None:intergenic | 60.0% |
| !! | AGGGCTGGCTTTGGAGCACT+TGG | + | chr1.1:63515025-63515044 | MS.gene005416:CDS | 60.0% |
| !! | GGCAAGATCAGGGCTGGCTT+TGG | + | chr1.1:63515016-63515035 | MS.gene005416:CDS | 60.0% |
| !! | TCAGTTGGCTTTCCCGGCAC+CGG | - | chr1.1:63514965-63514984 | None:intergenic | 60.0% |
| GCGTCGAAATCTTGGGGCCG+AGG | + | chr1.1:63515234-63515253 | MS.gene005416:CDS | 65.0% | |
| GGGAAATTGAGGCCGGTGCC+GGG | + | chr1.1:63514950-63514969 | MS.gene005416:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 63513715 | 63519178 | 63513715 | ID=MS.gene005416 |
| chr1.1 | mRNA | 63513715 | 63519178 | 63513715 | ID=MS.gene005416.t1;Parent=MS.gene005416 |
| chr1.1 | exon | 63513715 | 63514134 | 63513715 | ID=MS.gene005416.t1.exon1;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63513715 | 63514134 | 63513715 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63514881 | 63515066 | 63514881 | ID=MS.gene005416.t1.exon2;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63514881 | 63515066 | 63514881 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63515205 | 63515289 | 63515205 | ID=MS.gene005416.t1.exon3;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63515205 | 63515289 | 63515205 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63516402 | 63516549 | 63516402 | ID=MS.gene005416.t1.exon4;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63516402 | 63516549 | 63516402 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63516631 | 63516711 | 63516631 | ID=MS.gene005416.t1.exon5;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63516631 | 63516711 | 63516631 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63516809 | 63516980 | 63516809 | ID=MS.gene005416.t1.exon6;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63516809 | 63516980 | 63516809 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63517963 | 63518122 | 63517963 | ID=MS.gene005416.t1.exon7;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63517963 | 63518122 | 63517963 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63518284 | 63518387 | 63518284 | ID=MS.gene005416.t1.exon8;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63518284 | 63518387 | 63518284 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| chr1.1 | exon | 63518879 | 63519178 | 63518879 | ID=MS.gene005416.t1.exon9;Parent=MS.gene005416.t1 |
| chr1.1 | CDS | 63518879 | 63519178 | 63518879 | ID=cds.MS.gene005416.t1;Parent=MS.gene005416.t1 |
| Gene Sequence |
| Protein sequence |
