Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034800.t1 | XP_003592451.2 | 98.1 | 267 | 5 | 0 | 1 | 267 | 1 | 267 | 1.20E-134 | 489.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034800.t1 | Q96291 | 82.6 | 236 | 38 | 2 | 35 | 267 | 31 | 266 | 1.6e-106 | 387.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034800.t1 | G7IE32 | 98.1 | 267 | 5 | 0 | 1 | 267 | 1 | 267 | 8.8e-135 | 489.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96270 | MS.gene034800 | PPI |
| MS.gene034800 | MS.gene20834 | PPI |
| MS.gene20783 | MS.gene034800 | PPI |
| MS.gene034800 | MS.gene07373 | PPI |
| MS.gene034800 | MS.gene21128 | PPI |
| MS.gene005416 | MS.gene034800 | PPI |
| MS.gene034800 | MS.gene004381 | PPI |
| MS.gene034800 | MS.gene07262 | PPI |
| MS.gene034800 | MS.gene20919 | PPI |
| MS.gene002700 | MS.gene034800 | PPI |
| MS.gene034800 | MS.gene05816 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034800.t1 | MTR_1g105090 | 98.127 | 267 | 5 | 0 | 1 | 267 | 1 | 267 | 0.0 | 535 |
| MS.gene034800.t1 | MTR_7g105830 | 86.056 | 251 | 25 | 3 | 23 | 267 | 19 | 265 | 3.75e-149 | 417 |
| MS.gene034800.t1 | MTR_4g094720 | 31.111 | 180 | 114 | 3 | 76 | 250 | 6 | 180 | 1.90e-22 | 92.4 |
| MS.gene034800.t1 | MTR_4g124790 | 32.867 | 143 | 87 | 3 | 90 | 231 | 87 | 221 | 1.56e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034800.t1 | AT5G06290 | 88.208 | 212 | 24 | 1 | 57 | 267 | 62 | 273 | 1.12e-139 | 394 |
| MS.gene034800.t1 | AT3G11630 | 90.686 | 204 | 18 | 1 | 65 | 267 | 63 | 266 | 6.26e-139 | 392 |
| MS.gene034800.t1 | AT5G06290 | 85.876 | 177 | 24 | 1 | 57 | 232 | 62 | 238 | 9.72e-110 | 317 |
| MS.gene034800.t1 | AT1G48130 | 30.682 | 176 | 117 | 2 | 76 | 250 | 6 | 177 | 7.71e-24 | 96.3 |
| MS.gene034800.t1 | AT3G26060 | 34.194 | 155 | 90 | 4 | 77 | 230 | 10 | 153 | 1.88e-16 | 75.1 |
| MS.gene034800.t1 | AT3G26060 | 33.758 | 157 | 88 | 5 | 77 | 230 | 72 | 215 | 3.95e-16 | 75.5 |
| MS.gene034800.t1 | AT3G26060 | 33.758 | 157 | 88 | 5 | 77 | 230 | 73 | 216 | 4.06e-16 | 75.5 |
Find 0 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTTAATCACTAAATATT+AGG | - | 8685:77937-77956 | MS.gene034800:intron | 15.0% |
| !! | ATTGAACATTAATTGATTAT+TGG | - | 8685:77603-77622 | MS.gene034800:CDS | 15.0% |
| !! | GAAAATTTCAAAATCAAAAT+TGG | + | 8685:77518-77537 | None:intergenic | 15.0% |
| !! | TCTTTAATCACTAAATATTA+GGG | - | 8685:77938-77957 | MS.gene034800:intron | 15.0% |
| !! | TTGAACATTAATTGATTATT+GGG | - | 8685:77604-77623 | MS.gene034800:CDS | 15.0% |
| !!! | GTTTTTTCATTTTTATTATG+TGG | - | 8685:78520-78539 | MS.gene034800:intron | 15.0% |
| !! | AAAATAGTGTAACTTATGTA+TGG | - | 8685:79613-79632 | MS.gene034800:intron | 20.0% |
| !! | AAATAAATCCTTAAACGATA+TGG | + | 8685:79030-79049 | None:intergenic | 20.0% |
| !! | AAATCCATATCAAAATCTTA+TGG | - | 8685:79554-79573 | MS.gene034800:intron | 20.0% |
| !! | AAGTATAGTCTTTAAATTTC+TGG | - | 8685:78354-78373 | MS.gene034800:intron | 20.0% |
| !! | AATTGGATAAATGAAAATTG+TGG | + | 8685:77501-77520 | None:intergenic | 20.0% |
| !! | ATTGGATAAATGAAAATTGT+GGG | + | 8685:77500-77519 | None:intergenic | 20.0% |
| !!! | AGTTTTTATTCGACTTTTTA+AGG | - | 8685:79787-79806 | MS.gene034800:intron | 20.0% |
| !!! | ATAAACTAGTTCTTACTATA+AGG | - | 8685:79057-79076 | MS.gene034800:intron | 20.0% |
| !!! | ATAAGATTTTGATATGGATT+TGG | + | 8685:79555-79574 | None:intergenic | 20.0% |
| !!! | TATAATTCATGCTTGTTTTT+GGG | - | 8685:77742-77761 | MS.gene034800:intron | 20.0% |
| !!! | TTACACTATTTTCATATGTT+AGG | + | 8685:79605-79624 | None:intergenic | 20.0% |
| !!! | TTATAATTCATGCTTGTTTT+TGG | - | 8685:77741-77760 | MS.gene034800:intron | 20.0% |
| ! | AGGTGATTATACAACTAATT+AGG | - | 8685:80112-80131 | MS.gene034800:intron | 25.0% |
| ! | ATAAAAAAAGAAACAGATGC+TGG | + | 8685:79422-79441 | None:intergenic | 25.0% |
| ! | ATGATTTAGTCAATCAAACA+TGG | + | 8685:78576-78595 | None:intergenic | 25.0% |
| ! | GGGAATTTCTTCATAAATAA+AGG | - | 8685:79150-79169 | MS.gene034800:intron | 25.0% |
| ! | TAAAGATTCCATATCGTTTA+AGG | - | 8685:79019-79038 | MS.gene034800:CDS | 25.0% |
| ! | TAGAATGCTTTAATGCATTT+GGG | - | 8685:78223-78242 | MS.gene034800:intron | 25.0% |
| ! | TGAATAAGAATATTGTCAGA+GGG | - | 8685:79130-79149 | MS.gene034800:intron | 25.0% |
| ! | TGATAATTAGATATGCTAGT+TGG | - | 8685:77632-77651 | MS.gene034800:intron | 25.0% |
| ! | TTGAATAAGAATATTGTCAG+AGG | - | 8685:79129-79148 | MS.gene034800:intron | 25.0% |
| !! | AAGTAATCTTTGCTAAGTTT+TGG | + | 8685:80336-80355 | None:intergenic | 25.0% |
| !! | AGTAATCTTTGCTAAGTTTT+GGG | + | 8685:80335-80354 | None:intergenic | 25.0% |
| !!! | AACACCATAAGATTTTGATA+TGG | + | 8685:79561-79580 | None:intergenic | 25.0% |
| !!! | ACTTTTTAAGGAATTGAACT+AGG | - | 8685:79799-79818 | MS.gene034800:intron | 25.0% |
| !!! | CTCATATTTCAATGTTGTTT+TGG | - | 8685:79857-79876 | MS.gene034800:intron | 25.0% |
| !!! | TATTTTTGAGTAATCGCTTT+TGG | - | 8685:78544-78563 | MS.gene034800:intron | 25.0% |
| AACTCAGAAAATTCTGCAAA+TGG | + | 8685:79741-79760 | None:intergenic | 30.0% | |
| AAGCTATCTTGGAGATATTA+TGG | + | 8685:78085-78104 | None:intergenic | 30.0% | |
| AATCAACTGCAAAGGATTAT+AGG | - | 8685:78990-79009 | MS.gene034800:CDS | 30.0% | |
| AATGGTTTAGGAAGAGAATT+AGG | + | 8685:77388-77407 | None:intergenic | 30.0% | |
| ACATTGAAATATGAGCGTAA+AGG | + | 8685:79852-79871 | None:intergenic | 30.0% | |
| ACTCAGAAAATTCTGCAAAT+GGG | + | 8685:79740-79759 | None:intergenic | 30.0% | |
| AGGATTGTTCATTATTGACA+AGG | - | 8685:80014-80033 | MS.gene034800:intron | 30.0% | |
| ATCAACTGCAAAGGATTATA+GGG | - | 8685:78991-79010 | MS.gene034800:CDS | 30.0% | |
| ATGGTTTAGGAAGAGAATTA+GGG | + | 8685:77387-77406 | None:intergenic | 30.0% | |
| ATGTGGTATAACCTATGTAA+CGG | - | 8685:79391-79410 | MS.gene034800:intron | 30.0% | |
| ATTTAACAAGGAAGCTACTA+CGG | + | 8685:77462-77481 | None:intergenic | 30.0% | |
| CATTGCTTAATAGCATTAAC+CGG | - | 8685:79891-79910 | MS.gene034800:intron | 30.0% | |
| CTAGAATGCTTTAATGCATT+TGG | - | 8685:78222-78241 | MS.gene034800:intron | 30.0% | |
| CTTGGAGATATTATGGAATT+TGG | + | 8685:78078-78097 | None:intergenic | 30.0% | |
| GAAAAATGAATCAACTGCAA+AGG | - | 8685:78982-79001 | MS.gene034800:CDS | 30.0% | |
| GATACAACAGAAAATCTAGA+CGG | + | 8685:79667-79686 | None:intergenic | 30.0% | |
| GATATTGTTCAATCTTGATG+TGG | + | 8685:80139-80158 | None:intergenic | 30.0% | |
| TAAAAATTCCCAATGTTGCA+GGG | - | 8685:79979-79998 | MS.gene034800:intron | 30.0% | |
| TCTTTATGCTCTTATGTATG+TGG | - | 8685:79374-79393 | MS.gene034800:intron | 30.0% | |
| TGTTCATTATTGACAAGGAA+GGG | - | 8685:80019-80038 | MS.gene034800:intron | 30.0% | |
| TTGTTCATTATTGACAAGGA+AGG | - | 8685:80018-80037 | MS.gene034800:intron | 30.0% | |
| ! | GCAATAAATACCGAGATTTT+GGG | - | 8685:78810-78829 | MS.gene034800:CDS | 30.0% |
| ! | TATCCTCTTTTTCTATCCAT+TGG | - | 8685:78642-78661 | MS.gene034800:intron | 30.0% |
| ! | TTTTGATCAGGAGTTTATCA+AGG | - | 8685:78443-78462 | MS.gene034800:intron | 30.0% |
| AAGTAGCACACATTATCGTT+AGG | + | 8685:78744-78763 | None:intergenic | 35.0% | |
| ACACATACCCTTGAAAAACA+AGG | - | 8685:79326-79345 | MS.gene034800:intron | 35.0% | |
| AGCTTACAGAGGATTTAACA+AGG | + | 8685:77474-77493 | None:intergenic | 35.0% | |
| AGTAGAAGAAGAGGGTAATT+TGG | + | 8685:77356-77375 | None:intergenic | 35.0% | |
| AGTCCAATGGATAGAAAAAG+AGG | + | 8685:78648-78667 | None:intergenic | 35.0% | |
| ATAGAGAGAGTAGAAGAAGA+GGG | + | 8685:77364-77383 | None:intergenic | 35.0% | |
| ATTGACACACAACGTTAACT+AGG | + | 8685:78895-78914 | None:intergenic | 35.0% | |
| CAGTCTTTACATAGACTACA+AGG | - | 8685:79280-79299 | MS.gene034800:intron | 35.0% | |
| CGAGAAGAATGTTGAAGATT+GGG | + | 8685:77439-77458 | None:intergenic | 35.0% | |
| CTAAAAATTCCCAATGTTGC+AGG | - | 8685:79978-79997 | MS.gene034800:intron | 35.0% | |
| CTTGCTTTCATAAGCTATCT+TGG | + | 8685:78096-78115 | None:intergenic | 35.0% | |
| GACTAAATCATTGTCATTCC+AGG | - | 8685:78585-78604 | MS.gene034800:intron | 35.0% | |
| GAGAAGAATGTTGAAGATTG+GGG | + | 8685:77438-77457 | None:intergenic | 35.0% | |
| GAGAGAAAAGTGAGGATTTA+GGG | + | 8685:77333-77352 | None:intergenic | 35.0% | |
| GTAGAAGAAGAGGGTAATTT+GGG | + | 8685:77355-77374 | None:intergenic | 35.0% | |
| GTAGTCTATGTAAAGACTGT+GGG | + | 8685:79279-79298 | None:intergenic | 35.0% | |
| GTTCAAACAGATAGAAAGTC+AGG | - | 8685:79488-79507 | MS.gene034800:intron | 35.0% | |
| GTTCATTATTGACAAGGAAG+GGG | - | 8685:80020-80039 | MS.gene034800:intron | 35.0% | |
| TAATTTGGGAGAGAAAAGTG+AGG | + | 8685:77341-77360 | None:intergenic | 35.0% | |
| TAGCATTTGTCAGTCTGTTT+GGG | - | 8685:77833-77852 | MS.gene034800:intron | 35.0% | |
| TCAAACTCTCTGACTACATT+GGG | - | 8685:78608-78627 | MS.gene034800:intron | 35.0% | |
| TGTAGTCTATGTAAAGACTG+TGG | + | 8685:79280-79299 | None:intergenic | 35.0% | |
| TTAGCATTTGTCAGTCTGTT+TGG | - | 8685:77832-77851 | MS.gene034800:intron | 35.0% | |
| TTGTTGTCTTGGTATCTGAT+AGG | - | 8685:79350-79369 | MS.gene034800:intron | 35.0% | |
| ! | CAAACTGTTTTCTAGACAGA+CGG | + | 8685:78155-78174 | None:intergenic | 35.0% |
| ! | CTGCAACATTGGGAATTTTT+AGG | + | 8685:79980-79999 | None:intergenic | 35.0% |
| ! | GGCAATAAATACCGAGATTT+TGG | - | 8685:78809-78828 | MS.gene034800:CDS | 35.0% |
| ! | TGCATTAAAGCATTCTAGCT+CGG | + | 8685:78220-78239 | None:intergenic | 35.0% |
| ! | TGTCTTCCATTCCACTATTT+TGG | - | 8685:79937-79956 | MS.gene034800:intron | 35.0% |
| ! | TTTAGATGCCAACTTTTGAC+CGG | + | 8685:79913-79932 | None:intergenic | 35.0% |
| !! | AAAAACAAGGCTTGTTGTCT+TGG | - | 8685:79339-79358 | MS.gene034800:intron | 35.0% |
| !! | TGATATGGATTTGGTGACAT+CGG | + | 8685:79546-79565 | None:intergenic | 35.0% |
| !!! | ACAACAAGCCTTGTTTTTCA+AGG | + | 8685:79337-79356 | None:intergenic | 35.0% |
| !!! | CAACAAGCCTTGTTTTTCAA+GGG | + | 8685:79336-79355 | None:intergenic | 35.0% |
| !!! | TTCTAGTTCACGTGCATTTT+CGG | - | 8685:77907-77926 | MS.gene034800:intron | 35.0% |
| AATGCAATTCCCTGCAACAT+TGG | + | 8685:79991-80010 | None:intergenic | 40.0% | |
| ACCAATTCCCAAGTTGTTGA+TGG | + | 8685:80061-80080 | None:intergenic | 40.0% | |
| ACCATCAACAACTTGGGAAT+TGG | - | 8685:80057-80076 | MS.gene034800:intron | 40.0% | |
| AGCATTAACCGGTCAAAAGT+TGG | - | 8685:79902-79921 | MS.gene034800:intron | 40.0% | |
| AGCATTTGTCAGTCTGTTTG+GGG | - | 8685:77834-77853 | MS.gene034800:intron | 40.0% | |
| ATCAGTATTCGTATTCGCGT+AGG | + | 8685:78483-78502 | None:intergenic | 40.0% | |
| ATCTCTCCCTAAACGAACTT+AGG | - | 8685:79687-79706 | MS.gene034800:intron | 40.0% | |
| ATGACACGAGTCCAAAATAG+TGG | + | 8685:79951-79970 | None:intergenic | 40.0% | |
| ATGCAATTCCCTGCAACATT+GGG | + | 8685:79990-80009 | None:intergenic | 40.0% | |
| ATGTTAGGACATACCTGATC+AGG | + | 8685:79590-79609 | None:intergenic | 40.0% | |
| ATTGTGGGAAAAGCTTACAG+AGG | + | 8685:77485-77504 | None:intergenic | 40.0% | |
| CAAACAAAGGTGAAGTCCAA+TGG | + | 8685:78661-78680 | None:intergenic | 40.0% | |
| CAAACAGATAGAAAGTCAGG+TGG | - | 8685:79491-79510 | MS.gene034800:intron | 40.0% | |
| CACTCTACCATCAACAACTT+GGG | - | 8685:80051-80070 | MS.gene034800:intron | 40.0% | |
| CACTGAAACACCCAAAATCT+CGG | + | 8685:78823-78842 | None:intergenic | 40.0% | |
| CTAACTAATAGACAGACAGC+AGG | + | 8685:78959-78978 | None:intergenic | 40.0% | |
| CTTAGGGTATGCCATATCTA+CGG | - | 8685:79704-79723 | MS.gene034800:intron | 40.0% | |
| GAACTGCACGATAGAAACAA+TGG | + | 8685:79453-79472 | None:intergenic | 40.0% | |
| GAGGATAATTCAAGTCACCA+AGG | + | 8685:79517-79536 | None:intergenic | 40.0% | |
| GATAGAGAGAGTAGAAGAAG+AGG | + | 8685:77365-77384 | None:intergenic | 40.0% | |
| GCATACCCTAAGTTCGTTTA+GGG | + | 8685:79696-79715 | None:intergenic | 40.0% | |
| GCGAGAAGAATGTTGAAGAT+TGG | + | 8685:77440-77459 | None:intergenic | 40.0% | |
| GGAGAGAAAAGTGAGGATTT+AGG | + | 8685:77334-77353 | None:intergenic | 40.0% | |
| GTCAAACTCTCTGACTACAT+TGG | - | 8685:78607-78626 | MS.gene034800:intron | 40.0% | |
| TAGCAAAGATTACTTTGCCG+CGG | - | 8685:80341-80360 | MS.gene034800:CDS | 40.0% | |
| TATGTAAAGACTGTGGGCAT+TGG | + | 8685:79273-79292 | None:intergenic | 40.0% | |
| TCTCAAAAACGCACATGAAC+TGG | + | 8685:78303-78322 | None:intergenic | 40.0% | |
| TCTCTCCCTAAACGAACTTA+GGG | - | 8685:79688-79707 | MS.gene034800:intron | 40.0% | |
| TGAGACAAAGAGAACACTAC+AGG | - | 8685:80092-80111 | MS.gene034800:intron | 40.0% | |
| TGCTGGAATTTCCGTTACAT+AGG | + | 8685:79405-79424 | None:intergenic | 40.0% | |
| TGGTGACTTGAATTATCCTC+TGG | - | 8685:79517-79536 | MS.gene034800:intron | 40.0% | |
| TTAGGGTATGCCATATCTAC+GGG | - | 8685:79705-79724 | MS.gene034800:intron | 40.0% | |
| TTTGTGAGTGTGTTTGAGAG+AGG | - | 8685:78004-78023 | MS.gene034800:intron | 40.0% | |
| ! | ACGAGTCCAAAATAGTGGAA+TGG | + | 8685:79946-79965 | None:intergenic | 40.0% |
| !! | TCTAGTTCACGTGCATTTTC+GGG | - | 8685:77908-77927 | MS.gene034800:intron | 40.0% |
| !!! | AAGTTTTGGGTCTGGTTTCA+TGG | + | 8685:80322-80341 | None:intergenic | 40.0% |
| !!! | TCTTTGCTAAGTTTTGGGTC+TGG | + | 8685:80330-80349 | None:intergenic | 40.0% |
| ACAGCCTCTGCTTCAAAATC+AGG | + | 8685:78423-78442 | None:intergenic | 45.0% | |
| ACCTGACTAACCAACCTGTT+GGG | + | 8685:78684-78703 | None:intergenic | 45.0% | |
| ATTGTCCCCTTGATCTGCAT+TGG | - | 8685:80221-80240 | MS.gene034800:CDS | 45.0% | |
| CAAGACCAATGCAGATCAAG+GGG | + | 8685:80229-80248 | None:intergenic | 45.0% | |
| CTCGGAGCAAGGACATAATT+TGG | + | 8685:78202-78221 | None:intergenic | 45.0% | |
| GAAAGTGAAGGGAGAGAGAA+TGG | + | 8685:77406-77425 | None:intergenic | 45.0% | |
| GAAGGGAGAGAGAATGGTTT+AGG | + | 8685:77400-77419 | None:intergenic | 45.0% | |
| GAGCGTAAAGGACAAGTGTT+GGG | + | 8685:79840-79859 | None:intergenic | 45.0% | |
| GCAAGACCAATGCAGATCAA+GGG | + | 8685:80230-80249 | None:intergenic | 45.0% | |
| GCACTCTACCATCAACAACT+TGG | - | 8685:80050-80069 | MS.gene034800:intron | 45.0% | |
| GCATTTGTCAGTCTGTTTGG+GGG | - | 8685:77835-77854 | MS.gene034800:intron | 45.0% | |
| GGCATACCCTAAGTTCGTTT+AGG | + | 8685:79697-79716 | None:intergenic | 45.0% | |
| GTATTCGTATTCGCGTAGGT+TGG | + | 8685:78479-78498 | None:intergenic | 45.0% | |
| TAGGGTATGCCATATCTACG+GGG | - | 8685:79706-79725 | MS.gene034800:intron | 45.0% | |
| TGAGAAGAGAGAAGAAGCAG+AGG | + | 8685:77302-77321 | None:intergenic | 45.0% | |
| TGAGCGTAAAGGACAAGTGT+TGG | + | 8685:79841-79860 | None:intergenic | 45.0% | |
| TGCAAGACCAATGCAGATCA+AGG | + | 8685:80231-80250 | None:intergenic | 45.0% | |
| TGGTGTTCTCATTCCTGATC+AGG | - | 8685:79574-79593 | MS.gene034800:intron | 45.0% | |
| TGTAGTCAGAGAGTTTGACC+TGG | + | 8685:78606-78625 | None:intergenic | 45.0% | |
| TTGCAGGGAATTGCATTGAG+AGG | - | 8685:79994-80013 | MS.gene034800:intron | 45.0% | |
| TTGCCTCAAACTCTGCATGT+CGG | + | 8685:78794-78813 | None:intergenic | 45.0% | |
| ! | TTCACCTTTGTTTGCCCAAC+AGG | - | 8685:78667-78686 | MS.gene034800:intron | 45.0% |
| !! | CGAGATTTTGGGTGTTTCAG+TGG | - | 8685:78821-78840 | MS.gene034800:CDS | 45.0% |
| !! | TTGATCTGCATTGGTCTTGC+AGG | - | 8685:80230-80249 | MS.gene034800:CDS | 45.0% |
| !!! | AGCACCTGATTTTGAAGCAG+AGG | - | 8685:78416-78435 | MS.gene034800:intron | 45.0% |
| !!! | AGCAGAGGCTGTTTTTGATC+AGG | - | 8685:78431-78450 | MS.gene034800:intron | 45.0% |
| ATGAAGTTTGCCCAGCTGGA+TGG | - | 8685:80280-80299 | MS.gene034800:CDS | 50.0% | |
| CAATGGAAGCTCACTCTGTG+AGG | + | 8685:78385-78404 | None:intergenic | 50.0% | |
| CAGAGTGAGCTTCCATTGGT+TGG | - | 8685:78387-78406 | MS.gene034800:intron | 50.0% | |
| CAGCTGGGCAAACTTCATCT+GGG | + | 8685:80278-80297 | None:intergenic | 50.0% | |
| CCAACCTGTTGGGCAAACAA+AGG | + | 8685:78674-78693 | None:intergenic | 50.0% | |
| CTCACAGAGTGAGCTTCCAT+TGG | - | 8685:78383-78402 | MS.gene034800:intron | 50.0% | |
| GACCTGACTAACCAACCTGT+TGG | + | 8685:78685-78704 | None:intergenic | 50.0% | |
| GATAGAAAGTCAGGTGGCCT+TGG | - | 8685:79497-79516 | MS.gene034800:intron | 50.0% | |
| GCAGTTCTCGCATCTTGCAT+GGG | - | 8685:79466-79485 | MS.gene034800:intron | 50.0% | |
| GGCGAGTGAAGGAAAGTGAA+GGG | + | 8685:77417-77436 | None:intergenic | 50.0% | |
| GTATGCCATATCTACGGGGA+AGG | - | 8685:79710-79729 | MS.gene034800:intron | 50.0% | |
| GTTCTCCTGCACATACTGCA+AGG | + | 8685:80256-80275 | None:intergenic | 50.0% | |
| TGACCGACATGCAGAGTTTG+AGG | - | 8685:78788-78807 | MS.gene034800:intron | 50.0% | |
| TGCAGTTCTCGCATCTTGCA+TGG | - | 8685:79465-79484 | MS.gene034800:intron | 50.0% | |
| TGCATGTCGGTCACTGAAAG+CGG | + | 8685:78781-78800 | None:intergenic | 50.0% | |
| TTGAAGATTGGGGCGAGTGA+AGG | + | 8685:77428-77447 | None:intergenic | 50.0% | |
| ! | CCTTTGTTTGCCCAACAGGT+TGG | - | 8685:78671-78690 | MS.gene034800:intron | 50.0% |
| ! | GGTGCTGCATTTCCAACCAA+TGG | + | 8685:78402-78421 | None:intergenic | 50.0% |
| ! | TTCGTATTCGCGTAGGTTGG+TGG | + | 8685:78476-78495 | None:intergenic | 50.0% |
| ! | TTGGTGACATCGGAAACCAG+AGG | + | 8685:79536-79555 | None:intergenic | 50.0% |
| !! | AAGCATTCTAGCTCGGAGCA+AGG | + | 8685:78213-78232 | None:intergenic | 50.0% |
| CAGTGGACAGTGTGGTACGT+TGG | - | 8685:78838-78857 | MS.gene034800:CDS | 55.0% | |
| CCAGATGAAGTTTGCCCAGC+TGG | - | 8685:80276-80295 | MS.gene034800:CDS | 55.0% | |
| CCAGCTGGGCAAACTTCATC+TGG | + | 8685:80279-80298 | None:intergenic | 55.0% | |
| GAGAGCCTTCCCCGTAGATA+TGG | + | 8685:79718-79737 | None:intergenic | 55.0% | |
| GGGCGAGTGAAGGAAAGTGA+AGG | + | 8685:77418-77437 | None:intergenic | 55.0% | |
| GGGTGTTTCAGTGGACAGTG+TGG | - | 8685:78830-78849 | MS.gene034800:CDS | 55.0% | |
| GGTTTCATGGACTTCTCCCC+AGG | + | 8685:80309-80328 | None:intergenic | 55.0% | |
| !! | GCCCAACAGGTTGGTTAGTC+AGG | - | 8685:78680-78699 | MS.gene034800:intron | 55.0% |
| GCAGGCCTTGCAGTATGTGC+AGG | - | 8685:80248-80267 | MS.gene034800:CDS | 60.0% | |
| CCCAGCTGGATGGAAGCCTG+GGG | - | 8685:80290-80309 | MS.gene034800:CDS | 65.0% | |
| CCCCAGGCTTCCATCCAGCT+GGG | + | 8685:80293-80312 | None:intergenic | 65.0% | |
| GCCCAGCTGGATGGAAGCCT+GGG | - | 8685:80289-80308 | MS.gene034800:CDS | 65.0% | |
| TCCCCAGGCTTCCATCCAGC+TGG | + | 8685:80294-80313 | None:intergenic | 65.0% | |
| TGCCCAGCTGGATGGAAGCC+TGG | - | 8685:80288-80307 | MS.gene034800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8685 | gene | 77277 | 80368 | 77277 | ID=MS.gene034800 |
| 8685 | mRNA | 77277 | 80368 | 77277 | ID=MS.gene034800.t1;Parent=MS.gene034800 |
| 8685 | exon | 80159 | 80368 | 80159 | ID=MS.gene034800.t1.exon1;Parent=MS.gene034800.t1 |
| 8685 | CDS | 80159 | 80368 | 80159 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 79181 | 79255 | 79181 | ID=MS.gene034800.t1.exon2;Parent=MS.gene034800.t1 |
| 8685 | CDS | 79181 | 79255 | 79181 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 78957 | 79038 | 78957 | ID=MS.gene034800.t1.exon3;Parent=MS.gene034800.t1 |
| 8685 | CDS | 78957 | 79038 | 78957 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 78794 | 78873 | 78794 | ID=MS.gene034800.t1.exon4;Parent=MS.gene034800.t1 |
| 8685 | CDS | 78794 | 78873 | 78794 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 78050 | 78175 | 78050 | ID=MS.gene034800.t1.exon5;Parent=MS.gene034800.t1 |
| 8685 | CDS | 78050 | 78175 | 78050 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 77532 | 77645 | 77532 | ID=MS.gene034800.t1.exon6;Parent=MS.gene034800.t1 |
| 8685 | CDS | 77532 | 77645 | 77532 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| 8685 | exon | 77277 | 77393 | 77277 | ID=MS.gene034800.t1.exon7;Parent=MS.gene034800.t1 |
| 8685 | CDS | 77277 | 77393 | 77277 | ID=cds.MS.gene034800.t1;Parent=MS.gene034800.t1 |
| Gene Sequence |
| Protein sequence |
