Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007149.t1 | XP_013450181.1 | 98.5 | 262 | 4 | 0 | 3 | 264 | 4 | 265 | 2.80E-139 | 504.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007149.t1 | Q96291 | 78.9 | 266 | 54 | 2 | 1 | 264 | 1 | 266 | 5.2e-110 | 398.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007149.t1 | G7ZUV5 | 98.5 | 262 | 4 | 0 | 3 | 264 | 4 | 265 | 2.0e-139 | 504.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96270 | MS.gene007149 | PPI |
| MS.gene007149 | MS.gene20834 | PPI |
| MS.gene20783 | MS.gene007149 | PPI |
| MS.gene005416 | MS.gene007149 | PPI |
| MS.gene002700 | MS.gene007149 | PPI |
| MS.gene007149 | MS.gene07373 | PPI |
| MS.gene007149 | MS.gene21128 | PPI |
| MS.gene05816 | MS.gene007149 | PPI |
| MS.gene004381 | MS.gene007149 | PPI |
| MS.gene20919 | MS.gene007149 | PPI |
| MS.gene007149 | MS.gene07262 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007149.t1 | MTR_7g105830 | 98.099 | 263 | 5 | 0 | 2 | 264 | 3 | 265 | 0.0 | 525 |
| MS.gene007149.t1 | MTR_1g105090 | 83.883 | 273 | 29 | 6 | 1 | 264 | 1 | 267 | 1.33e-153 | 429 |
| MS.gene007149.t1 | MTR_4g094720 | 31.111 | 180 | 114 | 3 | 73 | 247 | 6 | 180 | 8.60e-23 | 93.6 |
| MS.gene007149.t1 | MTR_4g124790 | 30.994 | 171 | 102 | 5 | 59 | 228 | 66 | 221 | 5.37e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007149.t1 | AT5G06290 | 90.741 | 216 | 18 | 2 | 50 | 264 | 59 | 273 | 5.14e-144 | 405 |
| MS.gene007149.t1 | AT3G11630 | 91.667 | 204 | 16 | 1 | 62 | 264 | 63 | 266 | 5.76e-140 | 394 |
| MS.gene007149.t1 | AT5G06290 | 87.845 | 181 | 20 | 2 | 50 | 229 | 59 | 238 | 2.45e-113 | 326 |
| MS.gene007149.t1 | AT1G48130 | 30.114 | 176 | 118 | 2 | 73 | 247 | 6 | 177 | 5.02e-23 | 94.0 |
| MS.gene007149.t1 | AT3G26060 | 34.194 | 155 | 90 | 4 | 74 | 227 | 10 | 153 | 1.14e-16 | 75.5 |
| MS.gene007149.t1 | AT3G26060 | 33.758 | 157 | 88 | 5 | 74 | 227 | 72 | 215 | 2.89e-16 | 75.9 |
| MS.gene007149.t1 | AT3G26060 | 33.758 | 157 | 88 | 5 | 74 | 227 | 73 | 216 | 3.19e-16 | 75.9 |
Find 80 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGGGAAGTGCGTAGTTT+AGG | 0.215883 | 7.3:+8554641 | None:intergenic |
| GTTAAACTATCTGAATATAT+TGG | 0.248804 | 7.3:-8553200 | MS.gene007149:CDS |
| TTGGGAGAGAAGAGGATGTT+AGG | 0.252613 | 7.3:+8554722 | None:intergenic |
| GGGAGAGAATTGGAGGAATT+GGG | 0.258409 | 7.3:+8554662 | None:intergenic |
| AGTACTCTTTGCTAAGTTTA+GGG | 0.275142 | 7.3:+8550385 | None:intergenic |
| AAGTACTCTTTGCTAAGTTT+AGG | 0.277836 | 7.3:+8550384 | None:intergenic |
| ATGTGGTGGAGAAGATAATT+TGG | 0.278915 | 7.3:+8554703 | None:intergenic |
| AGGGAGAGAATTGGAGGAAT+TGG | 0.282783 | 7.3:+8554661 | None:intergenic |
| GGAACTTAATACAGAGATAT+TGG | 0.285595 | 7.3:-8553000 | MS.gene007149:CDS |
| GGAGGGAAGTGCGTAGTTTA+GGG | 0.295279 | 7.3:+8554642 | None:intergenic |
| AAGTTTAGGGTCTGGTTTCA+TGG | 0.308012 | 7.3:+8550398 | None:intergenic |
| CCCGATGAAGTTTGCCCTGC+TGG | 0.308593 | 7.3:-8550441 | MS.gene007149:CDS |
| TGGGAGAGAAGAGGATGTTA+GGG | 0.369953 | 7.3:+8554723 | None:intergenic |
| TGCCCTGCTGGGTGGAAGCC+TGG | 0.371090 | 7.3:-8550429 | MS.gene007149:CDS |
| TGTGGTGGAGAAGATAATTT+GGG | 0.380711 | 7.3:+8554704 | None:intergenic |
| AAATCCATATCAAAATCTTA+TGG | 0.385045 | 7.3:-8551025 | MS.gene007149:CDS |
| TTCACATTTGTTTGCCCCAC+AGG | 0.386111 | 7.3:-8553140 | MS.gene007149:intron |
| TTAAACTATCTGAATATATT+GGG | 0.386115 | 7.3:-8553199 | MS.gene007149:CDS |
| CCAGCAGGGCAAACTTCATC+GGG | 0.387505 | 7.3:+8550441 | None:intergenic |
| ACAGCCTCAGCTTCAAAATC+TGG | 0.388070 | 7.3:+8553319 | None:intergenic |
| TGTAGTTCTCGCACCTTGCA+TGG | 0.388525 | 7.3:-8551114 | MS.gene007149:intron |
| GTGTCAAAATTTACCTGATC+AGG | 0.391100 | 7.3:+8550992 | None:intergenic |
| TGGTGTTCTCATTCCTGATC+AGG | 0.396767 | 7.3:-8551005 | MS.gene007149:intron |
| ACCATCAACAACCTCGGAAT+TGG | 0.399693 | 7.3:-8550667 | MS.gene007149:CDS |
| GCGTAGTTTAGGGAGAGAAT+TGG | 0.401138 | 7.3:+8554652 | None:intergenic |
| AGAAGCAGATGGAGCTGAGC+AGG | 0.404326 | 7.3:+8554760 | None:intergenic |
| AGGAGCGGTTGAGGGAAAGA+GGG | 0.413713 | 7.3:+8554621 | None:intergenic |
| GGTTTCATGGACTTCTCACC+AGG | 0.417997 | 7.3:+8550411 | None:intergenic |
| TCACCAGGCTTCCACCCAGC+AGG | 0.418832 | 7.3:+8550426 | None:intergenic |
| GAGAAGAAGAGGAGCGGTTG+AGG | 0.419127 | 7.3:+8554612 | None:intergenic |
| GAGGAGCGGTTGAGGGAAAG+AGG | 0.420689 | 7.3:+8554620 | None:intergenic |
| TCTTTGCTAAGTTTAGGGTC+TGG | 0.422181 | 7.3:+8550390 | None:intergenic |
| ACCAATTCCGAGGTTGTTGA+TGG | 0.432822 | 7.3:+8550666 | None:intergenic |
| GACAGAAAGTCCGGTGGTCT+CGG | 0.433149 | 7.3:-8551082 | MS.gene007149:CDS |
| GAACTTAATACAGAGATATT+GGG | 0.451651 | 7.3:-8552999 | MS.gene007149:CDS |
| GGCGCAGCGTTCCCAACTAA+TGG | 0.459593 | 7.3:+8553340 | None:intergenic |
| AAGAGCGAACTACCATTAGT+TGG | 0.460962 | 7.3:-8553352 | MS.gene007149:CDS |
| CCCAGCAGGGCAAACTTCAT+CGG | 0.471666 | 7.3:+8550440 | None:intergenic |
| AGCGGTTGAGGGAAAGAGGG+AGG | 0.482247 | 7.3:+8554624 | None:intergenic |
| GGAGAGAATTGGAGGAATTG+GGG | 0.485152 | 7.3:+8554663 | None:intergenic |
| TGACCGCCATGCAGAATTTG+CGG | 0.486264 | 7.3:-8553021 | MS.gene007149:CDS |
| TGTTCATTATTGACAAGGAA+GGG | 0.497591 | 7.3:-8550705 | MS.gene007149:CDS |
| GCGGTTGAGGGAAAGAGGGA+GGG | 0.507328 | 7.3:+8554625 | None:intergenic |
| GAAACTGCGGCGAGAAGAAG+AGG | 0.508647 | 7.3:+8554601 | None:intergenic |
| AGAAGAAGAGGAGCGGTTGA+GGG | 0.511653 | 7.3:+8554613 | None:intergenic |
| GTAGTTCTCGCACCTTGCAT+GGG | 0.512924 | 7.3:-8551113 | MS.gene007149:intron |
| AAACAAATGTGAAGTCCAAT+GGG | 0.523515 | 7.3:+8553150 | None:intergenic |
| TAGTTTAGGGAGAGAATTGG+AGG | 0.527220 | 7.3:+8554655 | None:intergenic |
| TTGTTCATTATTGACAAGGA+AGG | 0.531673 | 7.3:-8550706 | MS.gene007149:CDS |
| AAGATAATTTGGGAGAGAAG+AGG | 0.533309 | 7.3:+8554714 | None:intergenic |
| AGAGCGAACTACCATTAGTT+GGG | 0.537134 | 7.3:-8553351 | MS.gene007149:CDS |
| CAAACAAATGTGAAGTCCAA+TGG | 0.543653 | 7.3:+8553149 | None:intergenic |
| GAGAGAGAAGAAAGATGTGG+TGG | 0.544776 | 7.3:+8554689 | None:intergenic |
| CCGATGAAGTTTGCCCTGCT+GGG | 0.550218 | 7.3:-8550440 | MS.gene007149:CDS |
| GCAGGCCTTGCAATACGTGC+AGG | 0.551362 | 7.3:-8550469 | MS.gene007149:intron |
| AGAATTGGAGGAATTGGGGA+TGG | 0.555868 | 7.3:+8554667 | None:intergenic |
| GTTCTCCTGCACGTATTGCA+AGG | 0.557103 | 7.3:+8550464 | None:intergenic |
| GTTCATTATTGACAAGGAAG+GGG | 0.557158 | 7.3:-8550704 | MS.gene007149:CDS |
| TGAGACAAAGAGAACACTCC+AGG | 0.563249 | 7.3:-8550632 | MS.gene007149:intron |
| GTTCAAACAGACAGAAAGTC+CGG | 0.564704 | 7.3:-8551091 | MS.gene007149:CDS |
| GGTTGTTGATGGTAGAATGT+TGG | 0.565020 | 7.3:+8550677 | None:intergenic |
| CACCAGGCTTCCACCCAGCA+GGG | 0.584088 | 7.3:+8550427 | None:intergenic |
| GAAGATAAGAGAGAAGCAGA+TGG | 0.588346 | 7.3:+8554749 | None:intergenic |
| TGTCTGTTTGAACCCATGCA+AGG | 0.591033 | 7.3:+8551101 | None:intergenic |
| ATTTAGGGGATAGCATTGAG+AGG | 0.608578 | 7.3:-8550730 | MS.gene007149:intron |
| GTTCAAGTCACCGAGACCAC+CGG | 0.609395 | 7.3:+8551072 | None:intergenic |
| CAACACTTCTACCAATTCCG+AGG | 0.625459 | 7.3:+8550656 | None:intergenic |
| TAAGTTCCGCAAATTCTGCA+TGG | 0.626665 | 7.3:+8553015 | None:intergenic |
| AGGATTGTTCATTATTGACA+AGG | 0.639152 | 7.3:-8550710 | MS.gene007149:CDS |
| ATGGAGAGAGAAGAAAGATG+TGG | 0.640784 | 7.3:+8554686 | None:intergenic |
| CATTCTACCATCAACAACCT+CGG | 0.642105 | 7.3:-8550673 | MS.gene007149:CDS |
| GGGTGTTTCAGTTGACAGTG+TGG | 0.646005 | 7.3:-8552979 | MS.gene007149:intron |
| TTGGTGACATCAGATACTAA+AGG | 0.646692 | 7.3:+8551046 | None:intergenic |
| ATGAAGTTTGCCCTGCTGGG+TGG | 0.658136 | 7.3:-8550437 | MS.gene007149:CDS |
| TGCGGCGAGAAGAAGAGGAG+CGG | 0.686466 | 7.3:+8554606 | None:intergenic |
| AAGCTTTAACGACGAAACTG+CGG | 0.686884 | 7.3:+8554588 | None:intergenic |
| GTTCCGCAAATTCTGCATGG+CGG | 0.722852 | 7.3:+8553018 | None:intergenic |
| AAAGGGTCGACCAACCTGTG+GGG | 0.742883 | 7.3:+8553126 | None:intergenic |
| CAAACAGACAGAAAGTCCGG+TGG | 0.767889 | 7.3:-8551088 | MS.gene007149:CDS |
| CAGCAGGGCAAACTTCATCG+GGG | 0.776185 | 7.3:+8550442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGAAAATGTAAATAAAA+GGG | + | chr7.3:8552645-8552664 | None:intergenic | 10.0% |
| !! | TATATATATATATATGAGTT+AGG | + | chr7.3:8553621-8553640 | None:intergenic | 10.0% |
| !!! | TTTAATTTCAATATATTATC+TGG | - | chr7.3:8554224-8554243 | MS.gene007149:intron | 10.0% |
| !!! | TTTTTTATATATACTAATCT+AGG | - | chr7.3:8552537-8552556 | MS.gene007149:intron | 10.0% |
| !! | AATATGTATTATTATTGACA+TGG | - | chr7.3:8553175-8553194 | MS.gene007149:CDS | 15.0% |
| !! | AGGACTAATTATTAAAATTA+AGG | + | chr7.3:8552192-8552211 | None:intergenic | 15.0% |
| !! | ATATATATATATATAGAGAC+AGG | - | chr7.3:8552825-8552844 | MS.gene007149:intron | 15.0% |
| !! | ATATGTATTATTATTGACAT+GGG | - | chr7.3:8553176-8553195 | MS.gene007149:CDS | 15.0% |
| !! | ATCAATAAATTATAAATGTC+TGG | + | chr7.3:8552247-8552266 | None:intergenic | 15.0% |
| !! | ATTTATTCATTTCATTGTTA+AGG | + | chr7.3:8553520-8553539 | None:intergenic | 15.0% |
| !! | CTAAAGAAAATGTAAATAAA+AGG | + | chr7.3:8552646-8552665 | None:intergenic | 15.0% |
| !! | TAAATCTAATTAAGAAACAT+GGG | - | chr7.3:8553228-8553247 | MS.gene007149:intron | 15.0% |
| !! | TCAATAAATTATAAATGTCT+GGG | + | chr7.3:8552246-8552265 | None:intergenic | 15.0% |
| !! | TGAGTTTATAAAATTACTTT+CGG | - | chr7.3:8550690-8550709 | MS.gene007149:CDS | 15.0% |
| !! | TTAAACTATCTGAATATATT+GGG | - | chr7.3:8551936-8551955 | MS.gene007149:intron | 15.0% |
| !! | TTAAATCTAATTAAGAAACA+TGG | - | chr7.3:8553227-8553246 | MS.gene007149:intron | 15.0% |
| !! | TTGAATAATTAAAAACAAGA+TGG | - | chr7.3:8551563-8551582 | MS.gene007149:intron | 15.0% |
| !!! | ACTTTTTATAATGTAGTATA+AGG | - | chr7.3:8550841-8550860 | MS.gene007149:intron | 15.0% |
| !!! | CTTTTTATAATGTAGTATAA+GGG | - | chr7.3:8550842-8550861 | MS.gene007149:intron | 15.0% |
| !!! | TTATTTATAAATTAGTTTGC+TGG | + | chr7.3:8552739-8552758 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTAAGAATACAT+GGG | + | chr7.3:8551045-8551064 | None:intergenic | 15.0% |
| !!! | TTTTTTCAATTAAGAATACA+TGG | + | chr7.3:8551046-8551065 | None:intergenic | 15.0% |
| !! | AAATCCATATCAAAATCTTA+TGG | - | chr7.3:8554110-8554129 | MS.gene007149:intron | 20.0% |
| !! | AAGTTTCATTAAAATGAGTT+TGG | - | chr7.3:8550735-8550754 | MS.gene007149:intron | 20.0% |
| !! | ACACCATTAGATTAATTAAA+TGG | + | chr7.3:8552902-8552921 | None:intergenic | 20.0% |
| !! | AGTATATATAAAAAACGTGA+AGG | + | chr7.3:8552532-8552551 | None:intergenic | 20.0% |
| !! | ATATAAGAGTTAACAATAGA+AGG | + | chr7.3:8552212-8552231 | None:intergenic | 20.0% |
| !! | ATATTTATAAGCTAGTACAA+CGG | - | chr7.3:8551105-8551124 | MS.gene007149:CDS | 20.0% |
| !! | ATCAAATATTGAATTGATTG+TGG | + | chr7.3:8553141-8553160 | None:intergenic | 20.0% |
| !! | ATTAAGATCAAAACAAAGAA+TGG | - | chr7.3:8553547-8553566 | MS.gene007149:intron | 20.0% |
| !! | ATTTATTGATATGACATTGT+TGG | - | chr7.3:8552257-8552276 | MS.gene007149:intron | 20.0% |
| !! | CAATAAATTATAAATGTCTG+GGG | + | chr7.3:8552245-8552264 | None:intergenic | 20.0% |
| !! | CATCCATTTAATTAATCTAA+TGG | - | chr7.3:8552896-8552915 | MS.gene007149:intron | 20.0% |
| !! | CATTAGATTAATTAAATGGA+TGG | + | chr7.3:8552898-8552917 | None:intergenic | 20.0% |
| !! | GTATATATAAAAAACGTGAA+GGG | + | chr7.3:8552531-8552550 | None:intergenic | 20.0% |
| !! | GTTAAACTATCTGAATATAT+TGG | - | chr7.3:8551935-8551954 | MS.gene007149:intron | 20.0% |
| !! | TAAGCTATAAGCTAAAAAAT+TGG | + | chr7.3:8550882-8550901 | None:intergenic | 20.0% |
| !! | TACAACTATAGTTTACTAAA+GGG | + | chr7.3:8552029-8552048 | None:intergenic | 20.0% |
| !!! | ATAAGATTTTGATATGGATT+TGG | + | chr7.3:8554111-8554130 | None:intergenic | 20.0% |
| !!! | ATTCTTTGTTTTGATCTTAA+TGG | + | chr7.3:8553548-8553567 | None:intergenic | 20.0% |
| !!! | ATTTTAATTGAATCGAATAG+TGG | + | chr7.3:8553205-8553224 | None:intergenic | 20.0% |
| !!! | ATTTTGACTTTCCATTATTT+AGG | + | chr7.3:8553787-8553806 | None:intergenic | 20.0% |
| !!! | CTATCTTTTACAAATTCAAT+CGG | - | chr7.3:8551136-8551155 | MS.gene007149:intron | 20.0% |
| !!! | TATTATCTGGAATGAAATAT+AGG | - | chr7.3:8554237-8554256 | MS.gene007149:intron | 20.0% |
| !!! | TTTTTTTTGCTATGATCAAT+TGG | - | chr7.3:8553400-8553419 | MS.gene007149:intron | 20.0% |
| ! | AAAAAACAGATGACTAAATG+TGG | + | chr7.3:8554571-8554590 | None:intergenic | 25.0% |
| ! | AAAATATGTAAGACAGTAAG+TGG | + | chr7.3:8552413-8552432 | None:intergenic | 25.0% |
| ! | AACTATTCTATTCTTCCATA+CGG | + | chr7.3:8553750-8553769 | None:intergenic | 25.0% |
| ! | AAGTAGAATTGAGTAATTCA+TGG | + | chr7.3:8553044-8553063 | None:intergenic | 25.0% |
| ! | AAGTTACAACAGTCAATAAT+TGG | + | chr7.3:8551676-8551695 | None:intergenic | 25.0% |
| ! | ATGGAAGAATAGAATAGTTT+GGG | - | chr7.3:8553751-8553770 | MS.gene007149:intron | 25.0% |
| ! | ATTCATTTCATTGTTAAGGT+GGG | + | chr7.3:8553516-8553535 | None:intergenic | 25.0% |
| ! | CAAAAGACATTGAATTTGAT+AGG | + | chr7.3:8554201-8554220 | None:intergenic | 25.0% |
| ! | CTACAACTATAGTTTACTAA+AGG | + | chr7.3:8552030-8552049 | None:intergenic | 25.0% |
| ! | GAACTTAATACAGAGATATT+GGG | - | chr7.3:8552136-8552155 | MS.gene007149:intron | 25.0% |
| ! | GTAGAACATAGAAAGATAAA+AGG | + | chr7.3:8554606-8554625 | None:intergenic | 25.0% |
| ! | TATGGAAGAATAGAATAGTT+TGG | - | chr7.3:8553750-8553769 | MS.gene007149:intron | 25.0% |
| ! | TATTCATTTCATTGTTAAGG+TGG | + | chr7.3:8553517-8553536 | None:intergenic | 25.0% |
| !! | TGATACCATCTTAGAATTTT+AGG | - | chr7.3:8551364-8551383 | MS.gene007149:intron | 25.0% |
| !!! | AACACCATAAGATTTTGATA+TGG | + | chr7.3:8554117-8554136 | None:intergenic | 25.0% |
| !!! | AGAAAATTTTGGGGATAATT+AGG | + | chr7.3:8552992-8553011 | None:intergenic | 25.0% |
| !!! | ATAAAGAGTGTTCAAAGATT+TGG | - | chr7.3:8552386-8552405 | MS.gene007149:intron | 25.0% |
| !!! | GTTTTAAACTCAGTTTGTAT+AGG | - | chr7.3:8552684-8552703 | MS.gene007149:intron | 25.0% |
| !!! | TGAACACTCTTTATTTTCTT+CGG | + | chr7.3:8552380-8552399 | None:intergenic | 25.0% |
| AAACAAATGTGAAGTCCAAT+GGG | + | chr7.3:8551988-8552007 | None:intergenic | 30.0% | |
| AAATAGAGGCTAAGATGTAT+AGG | - | chr7.3:8551251-8551270 | MS.gene007149:intron | 30.0% | |
| AACAAAGAATGGTTAGGATT+TGG | - | chr7.3:8553558-8553577 | MS.gene007149:intron | 30.0% | |
| AAGATATAAGGTCTGAACAT+GGG | + | chr7.3:8551451-8551470 | None:intergenic | 30.0% | |
| AAGTACTCTTTGCTAAGTTT+AGG | + | chr7.3:8554754-8554773 | None:intergenic | 30.0% | |
| AAGTCTATCCAAAGATTCAT+TGG | + | chr7.3:8551344-8551363 | None:intergenic | 30.0% | |
| AATAGAGGCTAAGATGTATA+GGG | - | chr7.3:8551252-8551271 | MS.gene007149:intron | 30.0% | |
| AATCATGAACTATACATGTG+CGG | + | chr7.3:8552436-8552455 | None:intergenic | 30.0% | |
| AGAAGAATCTGAATTGTTGT+TGG | + | chr7.3:8553095-8553114 | None:intergenic | 30.0% | |
| AGGATTGTTCATTATTGACA+AGG | - | chr7.3:8554425-8554444 | MS.gene007149:intron | 30.0% | |
| AGGGTGAACAAGAAAATATT+TGG | + | chr7.3:8552056-8552075 | None:intergenic | 30.0% | |
| AGTACTCTTTGCTAAGTTTA+GGG | + | chr7.3:8554753-8554772 | None:intergenic | 30.0% | |
| AGTCTATCCAAAGATTCATT+GGG | + | chr7.3:8551343-8551362 | None:intergenic | 30.0% | |
| ATGAGATTGGGATCAAATTA+AGG | - | chr7.3:8553255-8553274 | MS.gene007149:intron | 30.0% | |
| CAAATGTTTCGATGATTTAG+GGG | - | chr7.3:8554391-8554410 | MS.gene007149:intron | 30.0% | |
| CACATGTATAGTTCATGATT+AGG | - | chr7.3:8552436-8552455 | MS.gene007149:intron | 30.0% | |
| CCAAACACTACAAATTCAAT+CGG | - | chr7.3:8551171-8551190 | MS.gene007149:intron | 30.0% | |
| CTAAGATGTATAGGGTAAAA+TGG | - | chr7.3:8551260-8551279 | MS.gene007149:intron | 30.0% | |
| GATCAAAACAAAGAATGGTT+AGG | - | chr7.3:8553552-8553571 | MS.gene007149:intron | 30.0% | |
| GCAAATGTTTCGATGATTTA+GGG | - | chr7.3:8554390-8554409 | MS.gene007149:intron | 30.0% | |
| GCAGAGGAAAATTAAAACTA+AGG | + | chr7.3:8553715-8553734 | None:intergenic | 30.0% | |
| GCATCTATCAATTGATAAAC+TGG | + | chr7.3:8550651-8550670 | None:intergenic | 30.0% | |
| GGAACTTAATACAGAGATAT+TGG | - | chr7.3:8552135-8552154 | MS.gene007149:intron | 30.0% | |
| TAGACGAGAAACAAATGTTA+GGG | + | chr7.3:8552075-8552094 | None:intergenic | 30.0% | |
| TATACATCTTAGCCTCTATT+TGG | + | chr7.3:8551252-8551271 | None:intergenic | 30.0% | |
| TATTAGAGACATTGCTTTCA+TGG | - | chr7.3:8551295-8551314 | MS.gene007149:intron | 30.0% | |
| TCAATTGGTATTTGATTGTG+TGG | - | chr7.3:8553415-8553434 | MS.gene007149:intron | 30.0% | |
| TGAAATATAGGATGCTTTCA+AGG | - | chr7.3:8554249-8554268 | MS.gene007149:intron | 30.0% | |
| TGACTTTCCATTATTTAGGA+AGG | + | chr7.3:8553783-8553802 | None:intergenic | 30.0% | |
| TGCAAATGTTTCGATGATTT+AGG | - | chr7.3:8554389-8554408 | MS.gene007149:intron | 30.0% | |
| TGGAAAGTCAAAATATCAGT+TGG | - | chr7.3:8553793-8553812 | MS.gene007149:intron | 30.0% | |
| TGGAAGAATAGAATAGTTTG+GGG | - | chr7.3:8553752-8553771 | MS.gene007149:intron | 30.0% | |
| TGTTCATTATTGACAAGGAA+GGG | - | chr7.3:8554430-8554449 | MS.gene007149:intron | 30.0% | |
| TTAAATGGATGGATCAGATT+TGG | + | chr7.3:8552887-8552906 | None:intergenic | 30.0% | |
| TTAAGGAATTGGATTTGAGT+AGG | - | chr7.3:8553272-8553291 | MS.gene007149:intron | 30.0% | |
| TTCATTTCATTGTTAAGGTG+GGG | + | chr7.3:8553515-8553534 | None:intergenic | 30.0% | |
| TTGGGATCAAATTAAGGAAT+TGG | - | chr7.3:8553261-8553280 | MS.gene007149:intron | 30.0% | |
| TTGTTCATTATTGACAAGGA+AGG | - | chr7.3:8554429-8554448 | MS.gene007149:intron | 30.0% | |
| ! | AACTAAAGCAATGTCTTTTC+AGG | - | chr7.3:8551913-8551932 | MS.gene007149:intron | 30.0% |
| ! | AATTTTCTACACCATCTCTT+TGG | - | chr7.3:8553004-8553023 | MS.gene007149:CDS | 30.0% |
| ! | AGAGATGGTGTAGAAAATTT+TGG | + | chr7.3:8553003-8553022 | None:intergenic | 30.0% |
| ! | AGATGGTGTAGAAAATTTTG+GGG | + | chr7.3:8553001-8553020 | None:intergenic | 30.0% |
| ! | GAGATGGTGTAGAAAATTTT+GGG | + | chr7.3:8553002-8553021 | None:intergenic | 30.0% |
| ! | TCTTTTTATGTCCAATCCAA+AGG | - | chr7.3:8553950-8553969 | MS.gene007149:intron | 30.0% |
| ! | TTTTGATCAGGAGTTTATCA+AGG | - | chr7.3:8551839-8551858 | MS.gene007149:intron | 30.0% |
| !! | AAATTTTGGGGATAATTAGG+CGG | + | chr7.3:8552989-8553008 | None:intergenic | 30.0% |
| !! | ACCATCTTAGAATTTTAGGT+TGG | - | chr7.3:8551368-8551387 | MS.gene007149:intron | 30.0% |
| !! | TGAGCTTATGTGTTTTGTTA+TGG | - | chr7.3:8550599-8550618 | MS.gene007149:intron | 30.0% |
| !!! | CCATCTTAGAATTTTAGGTT+GGG | - | chr7.3:8551369-8551388 | MS.gene007149:intron | 30.0% |
| !!! | TTTTAATTTTCCTCTGCAAC+CGG | - | chr7.3:8553718-8553737 | MS.gene007149:intron | 30.0% |
| AACACATAAGCTCAACAAAG+AGG | + | chr7.3:8550593-8550612 | None:intergenic | 35.0% | |
| AAGATAATTTGGGAGAGAAG+AGG | + | chr7.3:8550424-8550443 | None:intergenic | 35.0% | |
| AATTAGGCGGAGATTAAACA+AGG | + | chr7.3:8552976-8552995 | None:intergenic | 35.0% | |
| ACACATAAGCTCAACAAAGA+GGG | + | chr7.3:8550592-8550611 | None:intergenic | 35.0% | |
| AGAAAGCGATTGTTACCAAA+CGG | + | chr7.3:8550936-8550955 | None:intergenic | 35.0% | |
| AGTTCATGATTAGGAGTTCT+AGG | - | chr7.3:8552445-8552464 | MS.gene007149:intron | 35.0% | |
| ATCAAGAAGAAGCAGACTTT+AGG | + | chr7.3:8553980-8553999 | None:intergenic | 35.0% | |
| ATGTAGTATAAGGGTCTATC+TGG | - | chr7.3:8550851-8550870 | MS.gene007149:intron | 35.0% | |
| ATTAAAACTAAGGAGTCCAG+TGG | + | chr7.3:8553705-8553724 | None:intergenic | 35.0% | |
| ATTGAGTAATTCATGGACGT+TGG | + | chr7.3:8553037-8553056 | None:intergenic | 35.0% | |
| CAAACAAATGTGAAGTCCAA+TGG | + | chr7.3:8551989-8552008 | None:intergenic | 35.0% | |
| CAAGAAAGACGATGAAACTA+TGG | - | chr7.3:8553295-8553314 | MS.gene007149:intron | 35.0% | |
| CAATTCAGATTCTTCTTCAC+TGG | - | chr7.3:8553099-8553118 | MS.gene007149:intron | 35.0% | |
| CACCTCACATTAGCAATTTA+GGG | + | chr7.3:8552934-8552953 | None:intergenic | 35.0% | |
| CCGATTGAATTTGTAGTGTT+TGG | + | chr7.3:8551174-8551193 | None:intergenic | 35.0% | |
| GAAGATATAAGGTCTGAACA+TGG | + | chr7.3:8551452-8551471 | None:intergenic | 35.0% | |
| GAATTAACTTCGTGTATCCA+TGG | - | chr7.3:8553069-8553088 | MS.gene007149:intron | 35.0% | |
| GCAAGCTACATATAATTACC+TGG | + | chr7.3:8554524-8554543 | None:intergenic | 35.0% | |
| GGAAGTTCCTTCCTAAATAA+TGG | - | chr7.3:8553773-8553792 | MS.gene007149:intron | 35.0% | |
| GTAGACGAGAAACAAATGTT+AGG | + | chr7.3:8552076-8552095 | None:intergenic | 35.0% | |
| GTCTCACATTGGAAGATATA+AGG | + | chr7.3:8551463-8551482 | None:intergenic | 35.0% | |
| GTCTGCTTCTTCTTGATTAT+CGG | - | chr7.3:8553983-8554002 | MS.gene007149:intron | 35.0% | |
| GTGTCAAAATTTACCTGATC+AGG | + | chr7.3:8554146-8554165 | None:intergenic | 35.0% | |
| GTTCATGATTAGGAGTTCTA+GGG | - | chr7.3:8552446-8552465 | MS.gene007149:intron | 35.0% | |
| GTTCATTATTGACAAGGAAG+GGG | - | chr7.3:8554431-8554450 | MS.gene007149:intron | 35.0% | |
| TAGATGCGATAGTCTATGTT+TGG | - | chr7.3:8550664-8550683 | MS.gene007149:CDS | 35.0% | |
| TATTCACTGCAATGCAACAA+TGG | + | chr7.3:8551502-8551521 | None:intergenic | 35.0% | |
| TATTTCATTCATTTGCGTGC+TGG | - | chr7.3:8551641-8551660 | MS.gene007149:intron | 35.0% | |
| TCACCTCACATTAGCAATTT+AGG | + | chr7.3:8552935-8552954 | None:intergenic | 35.0% | |
| TGCAAGTCCAATGCATATAT+GGG | + | chr7.3:8554649-8554668 | None:intergenic | 35.0% | |
| TTCCCTAAATTGCTAATGTG+AGG | - | chr7.3:8552929-8552948 | MS.gene007149:intron | 35.0% | |
| TTGACTAAAAATGACCCGTT+TGG | - | chr7.3:8550918-8550937 | MS.gene007149:intron | 35.0% | |
| ! | ATGTGGTGGAGAAGATAATT+TGG | + | chr7.3:8550435-8550454 | None:intergenic | 35.0% |
| ! | CCCAACCTAAAATTCTAAGA+TGG | + | chr7.3:8551372-8551391 | None:intergenic | 35.0% |
| ! | CGCTAACTTTTACCAAATAG+AGG | - | chr7.3:8551237-8551256 | MS.gene007149:intron | 35.0% |
| ! | TATCCTCTTTTTCTACCCAT+TGG | - | chr7.3:8551970-8551989 | MS.gene007149:intron | 35.0% |
| ! | TGTGGTGGAGAAGATAATTT+GGG | + | chr7.3:8550434-8550453 | None:intergenic | 35.0% |
| ! | TTGGTGACATCAGATACTAA+AGG | + | chr7.3:8554092-8554111 | None:intergenic | 35.0% |
| ! | TTGTGTAGTTTCTAGGTTGA+GGG | - | chr7.3:8552603-8552622 | MS.gene007149:intron | 35.0% |
| !! | AAATTAGTTTGCTGGTCTAG+TGG | + | chr7.3:8552731-8552750 | None:intergenic | 35.0% |
| !! | AGTAGTGAATAGCTTTGTCT+AGG | - | chr7.3:8554296-8554315 | MS.gene007149:intron | 35.0% |
| !!! | ACGGGTCATTTTTAGTCAAA+TGG | + | chr7.3:8550917-8550936 | None:intergenic | 35.0% |
| !!! | TAGCAAAGAGTACTTTTCTG+CGG | - | chr7.3:8554759-8554778 | MS.gene007149:CDS | 35.0% |
| AAACATGGGAGCTATGAGAT+TGG | - | chr7.3:8553242-8553261 | MS.gene007149:intron | 40.0% | |
| AAATGTGGTCATTCCTGGTA+TGG | + | chr7.3:8554556-8554575 | None:intergenic | 40.0% | |
| AACATGGGAGCTATGAGATT+GGG | - | chr7.3:8553243-8553262 | MS.gene007149:intron | 40.0% | |
| AAGAGCGAACTACCATTAGT+TGG | - | chr7.3:8551783-8551802 | MS.gene007149:intron | 40.0% | |
| AAGTGCGTTGTGTAGTTTCT+AGG | - | chr7.3:8552596-8552615 | MS.gene007149:intron | 40.0% | |
| AGAGCGAACTACCATTAGTT+GGG | - | chr7.3:8551784-8551803 | MS.gene007149:intron | 40.0% | |
| AGTCCAATGGGTAGAAAAAG+AGG | + | chr7.3:8551976-8551995 | None:intergenic | 40.0% | |
| ATAGACCACAGTTTAGATCG+TGG | + | chr7.3:8554168-8554187 | None:intergenic | 40.0% | |
| ATGAAATTTGCACCTGACAG+TGG | - | chr7.3:8552571-8552590 | MS.gene007149:intron | 40.0% | |
| ATGGACACATGCACAACATT+AGG | - | chr7.3:8551314-8551333 | MS.gene007149:intron | 40.0% | |
| ATGGAGAGAGAAGAAAGATG+TGG | + | chr7.3:8550452-8550471 | None:intergenic | 40.0% | |
| CACATAAGCTCAACAAAGAG+GGG | + | chr7.3:8550591-8550610 | None:intergenic | 40.0% | |
| CATATATGCATTGGACTTGC+AGG | - | chr7.3:8554648-8554667 | MS.gene007149:CDS | 40.0% | |
| CATCTGTAGTCAGAAGATCA+AGG | + | chr7.3:8553857-8553876 | None:intergenic | 40.0% | |
| CATTCTACCATCAACAACCT+CGG | - | chr7.3:8554462-8554481 | MS.gene007149:intron | 40.0% | |
| CTGCAAGTCCAATGCATATA+TGG | + | chr7.3:8554650-8554669 | None:intergenic | 40.0% | |
| GAAAGCGATTGTTACCAAAC+GGG | + | chr7.3:8550935-8550954 | None:intergenic | 40.0% | |
| GAAGATAAGAGAGAAGCAGA+TGG | + | chr7.3:8550389-8550408 | None:intergenic | 40.0% | |
| GCAAGTCCAATGCATATATG+GGG | + | chr7.3:8554648-8554667 | None:intergenic | 40.0% | |
| GTTCAAACAGACAGAAAGTC+CGG | - | chr7.3:8554044-8554063 | MS.gene007149:intron | 40.0% | |
| GTTTGTCCCCATATATGCAT+TGG | - | chr7.3:8554639-8554658 | MS.gene007149:CDS | 40.0% | |
| TAAGTTCCGCAAATTCTGCA+TGG | + | chr7.3:8552123-8552142 | None:intergenic | 40.0% | |
| TAATGCATGCATGTGCTAGT+AGG | + | chr7.3:8553897-8553916 | None:intergenic | 40.0% | |
| TAGGTAGCCCAATGAATCTT+TGG | - | chr7.3:8551333-8551352 | MS.gene007149:intron | 40.0% | |
| TAGTTTAGGGAGAGAATTGG+AGG | + | chr7.3:8550483-8550502 | None:intergenic | 40.0% | |
| TGACTAAATGTGGTCATTCC+TGG | + | chr7.3:8554561-8554580 | None:intergenic | 40.0% | |
| TTCAACGCTTATAAGCCTCA+AGG | + | chr7.3:8551606-8551625 | None:intergenic | 40.0% | |
| TTCAGATTCTTCTTCACTGG+TGG | - | chr7.3:8553102-8553121 | MS.gene007149:intron | 40.0% | |
| ! | AAGCTTTAACGACGAAACTG+CGG | + | chr7.3:8550550-8550569 | None:intergenic | 40.0% |
| ! | AAGTTTAGGGTCTGGTTTCA+TGG | + | chr7.3:8554740-8554759 | None:intergenic | 40.0% |
| ! | ATCTGAATTGTTGTTGGCCA+TGG | + | chr7.3:8553089-8553108 | None:intergenic | 40.0% |
| ! | ATTTAGGGGATAGCATTGAG+AGG | - | chr7.3:8554405-8554424 | MS.gene007149:intron | 40.0% |
| ! | ATTTGTTACGCGTCTCACAT+TGG | + | chr7.3:8551474-8551493 | None:intergenic | 40.0% |
| ! | GTTGTGTAGTTTCTAGGTTG+AGG | - | chr7.3:8552602-8552621 | MS.gene007149:intron | 40.0% |
| ! | TCTTTGCTAAGTTTAGGGTC+TGG | + | chr7.3:8554748-8554767 | None:intergenic | 40.0% |
| !! | GAGGCTTATAAGCGTTGAAA+TGG | - | chr7.3:8551607-8551626 | MS.gene007149:intron | 40.0% |
| !! | GGTTGTTGATGGTAGAATGT+TGG | + | chr7.3:8554461-8554480 | None:intergenic | 40.0% |
| AAAACTAAGGAGTCCAGTGG+CGG | + | chr7.3:8553702-8553721 | None:intergenic | 45.0% | |
| AACGCTTATAAGCCTCAAGG+AGG | + | chr7.3:8551603-8551622 | None:intergenic | 45.0% | |
| ACAGCCTCAGCTTCAAAATC+TGG | + | chr7.3:8551819-8551838 | None:intergenic | 45.0% | |
| ACCAATTCCGAGGTTGTTGA+TGG | + | chr7.3:8554472-8554491 | None:intergenic | 45.0% | |
| ACCATCAACAACCTCGGAAT+TGG | - | chr7.3:8554468-8554487 | MS.gene007149:intron | 45.0% | |
| ACCGTAAGGATACCAGACAT+AGG | - | chr7.3:8553447-8553466 | MS.gene007149:intron | 45.0% | |
| AGAATTGGAGGAATTGGGGA+TGG | + | chr7.3:8550471-8550490 | None:intergenic | 45.0% | |
| AGGGAGAGAATTGGAGGAAT+TGG | + | chr7.3:8550477-8550496 | None:intergenic | 45.0% | |
| ATCTTCTTCCTCCCTATGTC+TGG | + | chr7.3:8553462-8553481 | None:intergenic | 45.0% | |
| CAACACTTCTACCAATTCCG+AGG | + | chr7.3:8554482-8554501 | None:intergenic | 45.0% | |
| CCCTATGTCTGGTATCCTTA+CGG | + | chr7.3:8553451-8553470 | None:intergenic | 45.0% | |
| CCGTAAGGATACCAGACATA+GGG | - | chr7.3:8553448-8553467 | MS.gene007149:intron | 45.0% | |
| CTTCGGTAGCAGATATGCAT+AGG | + | chr7.3:8552363-8552382 | None:intergenic | 45.0% | |
| GAGAGAGAAGAAAGATGTGG+TGG | + | chr7.3:8550449-8550468 | None:intergenic | 45.0% | |
| GCAATCTTCACCTTACGAGT+CGG | + | chr7.3:8551415-8551434 | None:intergenic | 45.0% | |
| GCGTAGTTTAGGGAGAGAAT+TGG | + | chr7.3:8550486-8550505 | None:intergenic | 45.0% | |
| GGAGAGAATTGGAGGAATTG+GGG | + | chr7.3:8550475-8550494 | None:intergenic | 45.0% | |
| GGGAGAGAATTGGAGGAATT+GGG | + | chr7.3:8550476-8550495 | None:intergenic | 45.0% | |
| TAAGGATACCAGACATAGGG+AGG | - | chr7.3:8553451-8553470 | MS.gene007149:intron | 45.0% | |
| TCAACGAATTCGTTGACACC+TGG | - | chr7.3:8553583-8553602 | MS.gene007149:intron | 45.0% | |
| TCATTCCTGGTATGGTGCAT+TGG | + | chr7.3:8554548-8554567 | None:intergenic | 45.0% | |
| TGACACCACGATCTAAACTG+TGG | - | chr7.3:8554160-8554179 | MS.gene007149:intron | 45.0% | |
| TGAGACAAAGAGAACACTCC+AGG | - | chr7.3:8554503-8554522 | MS.gene007149:intron | 45.0% | |
| TGGGAGAGAAGAGGATGTTA+GGG | + | chr7.3:8550415-8550434 | None:intergenic | 45.0% | |
| TGGTGTTCTCATTCCTGATC+AGG | - | chr7.3:8554130-8554149 | MS.gene007149:intron | 45.0% | |
| TGTCTGTTTGAACCCATGCA+AGG | + | chr7.3:8554037-8554056 | None:intergenic | 45.0% | |
| TTCACATTTGTTTGCCCCAC+AGG | - | chr7.3:8551995-8552014 | MS.gene007149:intron | 45.0% | |
| TTCTTCCATACGGATGTAGC+CGG | + | chr7.3:8553740-8553759 | None:intergenic | 45.0% | |
| TTGGGAGAGAAGAGGATGTT+AGG | + | chr7.3:8550416-8550435 | None:intergenic | 45.0% | |
| TTGGTGTGTCTCCAAAGAGA+TGG | + | chr7.3:8553018-8553037 | None:intergenic | 45.0% | |
| ! | AGTACTTTTCTGCGGTGTAG+CGG | - | chr7.3:8554767-8554786 | MS.gene007149:CDS | 45.0% |
| ! | ATTCTTCTTCACTGGTGGTG+TGG | - | chr7.3:8553107-8553126 | MS.gene007149:intron | 45.0% |
| !! | AAAAAACGTGAAGGGTGCCA+CGG | + | chr7.3:8552523-8552542 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGACTCGTA+AGG | - | chr7.3:8551402-8551421 | MS.gene007149:intron | 45.0% |
| !! | CCTTACGAGTCGGTTTTGTA+AGG | + | chr7.3:8551405-8551424 | None:intergenic | 45.0% |
| !! | CTTTAGGAGTGCCTTTGGAT+TGG | + | chr7.3:8553964-8553983 | None:intergenic | 45.0% |
| !! | GAGTTCTAGGGAAATCTGCA+TGG | - | chr7.3:8552458-8552477 | MS.gene007149:intron | 45.0% |
| !!! | AGCTGAGGCTGTTTTTGATC+AGG | - | chr7.3:8551827-8551846 | MS.gene007149:intron | 45.0% |
| AAGCCTCAAGGAGGAAGAGT+CGG | + | chr7.3:8551594-8551613 | None:intergenic | 50.0% | |
| AGAAGAAGAGGAGCGGTTGA+GGG | + | chr7.3:8550525-8550544 | None:intergenic | 50.0% | |
| ATCTGCATGGACTCCTTCAG+TGG | - | chr7.3:8552471-8552490 | MS.gene007149:intron | 50.0% | |
| CAAACAGACAGAAAGTCCGG+TGG | - | chr7.3:8554047-8554066 | MS.gene007149:intron | 50.0% | |
| CAACGCACTTAACCACTGTC+AGG | + | chr7.3:8552586-8552605 | None:intergenic | 50.0% | |
| CATTTGTTTGCCCCACAGGT+TGG | - | chr7.3:8551999-8552018 | MS.gene007149:intron | 50.0% | |
| GGGTGTTTCAGTTGACAGTG+TGG | - | chr7.3:8552156-8552175 | MS.gene007149:intron | 50.0% | |
| GGTTTCATGGACTTCTCACC+AGG | + | chr7.3:8554727-8554746 | None:intergenic | 50.0% | |
| GTAGTTCTCGCACCTTGCAT+GGG | - | chr7.3:8554022-8554041 | MS.gene007149:intron | 50.0% | |
| GTTAGGATCCGTTTGACACC+AGG | + | chr7.3:8553604-8553623 | None:intergenic | 50.0% | |
| GTTCCGCAAATTCTGCATGG+CGG | + | chr7.3:8552120-8552139 | None:intergenic | 50.0% | |
| GTTCTCCTGCACGTATTGCA+AGG | + | chr7.3:8554674-8554693 | None:intergenic | 50.0% | |
| TAAAGGGTCGACCAACCTGT+GGG | + | chr7.3:8552013-8552032 | None:intergenic | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | + | chr7.3:8552862-8552881 | None:intergenic | 50.0% | |
| TGACCGCCATGCAGAATTTG+CGG | - | chr7.3:8552114-8552133 | MS.gene007149:intron | 50.0% | |
| TGTAGTTCTCGCACCTTGCA+TGG | - | chr7.3:8554021-8554040 | MS.gene007149:intron | 50.0% | |
| TGTCTGGTATCCTTACGGTC+AGG | + | chr7.3:8553446-8553465 | None:intergenic | 50.0% | |
| TGTGGAAGAACCTGACCGTA+AGG | - | chr7.3:8553433-8553452 | MS.gene007149:intron | 50.0% | |
| TTGCACCAATGCACCATACC+AGG | - | chr7.3:8554540-8554559 | MS.gene007149:intron | 50.0% | |
| TTTCAATCAAGCTCCGCCAC+TGG | - | chr7.3:8553686-8553705 | MS.gene007149:intron | 50.0% | |
| ! | CGTTGACACCTGGTGTCAAA+CGG | - | chr7.3:8553593-8553612 | MS.gene007149:intron | 50.0% |
| ! | GGAGGGAAGTGCGTAGTTTA+GGG | + | chr7.3:8550496-8550515 | None:intergenic | 50.0% |
| !! | GCAGACTTTAGGAGTGCCTT+TGG | + | chr7.3:8553969-8553988 | None:intergenic | 50.0% |
| !!! | TGCGCCAGATTTTGAAGCTG+AGG | - | chr7.3:8551812-8551831 | MS.gene007149:intron | 50.0% |
| AAAGGGTCGACCAACCTGTG+GGG | + | chr7.3:8552012-8552031 | None:intergenic | 55.0% | |
| AGAAGCAGATGGAGCTGAGC+AGG | + | chr7.3:8550378-8550397 | None:intergenic | 55.0% | |
| AGACAGGATCCGTTGACACC+AGG | - | chr7.3:8552841-8552860 | MS.gene007149:intron | 55.0% | |
| AGCCTCAAGGAGGAAGAGTC+GGG | + | chr7.3:8551593-8551612 | None:intergenic | 55.0% | |
| AGGAGCGGTTGAGGGAAAGA+GGG | + | chr7.3:8550517-8550536 | None:intergenic | 55.0% | |
| ATGAAGTTTGCCCTGCTGGG+TGG | - | chr7.3:8554698-8554717 | MS.gene007149:CDS | 55.0% | |
| CAGCAGGGCAAACTTCATCG+GGG | + | chr7.3:8554696-8554715 | None:intergenic | 55.0% | |
| CCAGCAGGGCAAACTTCATC+GGG | + | chr7.3:8554697-8554716 | None:intergenic | 55.0% | |
| CCCAGCAGGGCAAACTTCAT+CGG | + | chr7.3:8554698-8554717 | None:intergenic | 55.0% | |
| CCGATGAAGTTTGCCCTGCT+GGG | - | chr7.3:8554695-8554714 | MS.gene007149:CDS | 55.0% | |
| CCGTTGACACCAGGTGTCAA+CGG | - | chr7.3:8552850-8552869 | MS.gene007149:intron | 55.0% | |
| CTAAAGGGTCGACCAACCTG+TGG | + | chr7.3:8552014-8552033 | None:intergenic | 55.0% | |
| GAAACTGCGGCGAGAAGAAG+AGG | + | chr7.3:8550537-8550556 | None:intergenic | 55.0% | |
| GACAGAAAGTCCGGTGGTCT+CGG | - | chr7.3:8554053-8554072 | MS.gene007149:intron | 55.0% | |
| GAGAAGAAGAGGAGCGGTTG+AGG | + | chr7.3:8550526-8550545 | None:intergenic | 55.0% | |
| GTTCAAGTCACCGAGACCAC+CGG | + | chr7.3:8554066-8554085 | None:intergenic | 55.0% | |
| TGCAACCGGCTACATCCGTA+TGG | - | chr7.3:8553732-8553751 | MS.gene007149:intron | 55.0% | |
| TGCATGGACTCCTTCAGTGG+CGG | - | chr7.3:8552474-8552493 | MS.gene007149:intron | 55.0% | |
| TTCCCGACTCTTCCTCCTTG+AGG | - | chr7.3:8551588-8551607 | MS.gene007149:intron | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | + | chr7.3:8552853-8552872 | None:intergenic | 55.0% |
| ! | GGGAGGGAAGTGCGTAGTTT+AGG | + | chr7.3:8550497-8550516 | None:intergenic | 55.0% |
| ! | TTCAGTGGCGGGGCTTCTAT+GGG | - | chr7.3:8552486-8552505 | MS.gene007149:intron | 55.0% |
| ACGGATGTAGCCGGTTGCAG+AGG | + | chr7.3:8553731-8553750 | None:intergenic | 60.0% | |
| AGCGGTTGAGGGAAAGAGGG+AGG | + | chr7.3:8550514-8550533 | None:intergenic | 60.0% | |
| CATAGAAGCCCCGCCACTGA+AGG | + | chr7.3:8552487-8552506 | None:intergenic | 60.0% | |
| CATGGACTCCTTCAGTGGCG+GGG | - | chr7.3:8552476-8552495 | MS.gene007149:intron | 60.0% | |
| CCCGATGAAGTTTGCCCTGC+TGG | - | chr7.3:8554694-8554713 | MS.gene007149:CDS | 60.0% | |
| GAGGAGCGGTTGAGGGAAAG+AGG | + | chr7.3:8550518-8550537 | None:intergenic | 60.0% | |
| GCAGGCCTTGCAATACGTGC+AGG | - | chr7.3:8554666-8554685 | MS.gene007149:CDS | 60.0% | |
| GCATGGACTCCTTCAGTGGC+GGG | - | chr7.3:8552475-8552494 | MS.gene007149:intron | 60.0% | |
| GCGGTTGAGGGAAAGAGGGA+GGG | + | chr7.3:8550513-8550532 | None:intergenic | 60.0% | |
| GGCGCAGCGTTCCCAACTAA+TGG | + | chr7.3:8551798-8551817 | None:intergenic | 60.0% | |
| TATGGGCCGGGTTAATGCCG+TGG | - | chr7.3:8552503-8552522 | MS.gene007149:intron | 60.0% | |
| TGCGGCGAGAAGAAGAGGAG+CGG | + | chr7.3:8550532-8550551 | None:intergenic | 60.0% | |
| ! | AGGGTGCCACGGCATTAACC+CGG | + | chr7.3:8552512-8552531 | None:intergenic | 60.0% |
| ! | CTTCAGTGGCGGGGCTTCTA+TGG | - | chr7.3:8552485-8552504 | MS.gene007149:intron | 60.0% |
| CACCAGGCTTCCACCCAGCA+GGG | + | chr7.3:8554711-8554730 | None:intergenic | 65.0% | |
| TCACCAGGCTTCCACCCAGC+AGG | + | chr7.3:8554712-8554731 | None:intergenic | 65.0% | |
| TGCCCTGCTGGGTGGAAGCC+TGG | - | chr7.3:8554706-8554725 | MS.gene007149:CDS | 70.0% | |
| TGGCGGGGCTTCTATGGGCC+GGG | - | chr7.3:8552491-8552510 | MS.gene007149:intron | 70.0% | |
| ! | GTGGCGGGGCTTCTATGGGC+CGG | - | chr7.3:8552490-8552509 | MS.gene007149:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 8550371 | 8554786 | 8550371 | ID=MS.gene007149 |
| chr7.3 | mRNA | 8550371 | 8554786 | 8550371 | ID=MS.gene007149.t1;Parent=MS.gene007149 |
| chr7.3 | exon | 8554586 | 8554786 | 8554586 | ID=MS.gene007149.t1.exon1;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8554586 | 8554786 | 8554586 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8553297 | 8553371 | 8553297 | ID=MS.gene007149.t1.exon2;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8553297 | 8553371 | 8553297 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8553141 | 8553222 | 8553141 | ID=MS.gene007149.t1.exon3;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8553141 | 8553222 | 8553141 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8552980 | 8553059 | 8552980 | ID=MS.gene007149.t1.exon4;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8552980 | 8553059 | 8552980 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8551006 | 8551131 | 8551006 | ID=MS.gene007149.t1.exon5;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8551006 | 8551131 | 8551006 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8550633 | 8550746 | 8550633 | ID=MS.gene007149.t1.exon6;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8550633 | 8550746 | 8550633 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| chr7.3 | exon | 8550371 | 8550487 | 8550371 | ID=MS.gene007149.t1.exon7;Parent=MS.gene007149.t1 |
| chr7.3 | CDS | 8550371 | 8550487 | 8550371 | ID=cds.MS.gene007149.t1;Parent=MS.gene007149.t1 |
| Gene Sequence |
| Protein sequence |
