Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005816.t1 | XP_003591748.3 | 99.3 | 843 | 6 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1687.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005816.t1 | F4J3T8 | 67.0 | 839 | 257 | 7 | 14 | 843 | 13 | 840 | 0.0e+00 | 1111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005816.t1 | A0A396JSR1 | 99.3 | 843 | 6 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1687.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005816 | MS.gene73119 | PPI |
| MS.gene064542 | MS.gene005816 | PPI |
| MS.gene005816 | MS.gene52620 | PPI |
| MS.gene44056 | MS.gene005816 | PPI |
| MS.gene035805 | MS.gene005816 | PPI |
| MS.gene005189 | MS.gene005816 | PPI |
| MS.gene005816 | MS.gene91547 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005816.t1 | MTR_1g492590 | 99.440 | 536 | 3 | 0 | 308 | 843 | 7 | 542 | 0.0 | 1113 |
| MS.gene005816.t1 | MTR_1g092570 | 98.710 | 310 | 4 | 0 | 1 | 310 | 1 | 310 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005816.t1 | AT3G10550 | 67.104 | 839 | 256 | 7 | 14 | 843 | 13 | 840 | 0.0 | 1137 |
| MS.gene005816.t1 | AT5G04540 | 63.822 | 832 | 282 | 5 | 14 | 840 | 13 | 830 | 0.0 | 1044 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCCAATGGTGCGATTAT+TGG | 0.179147 | 1.1:+66964099 | MS.gene005816:CDS |
| TCGGACATTCAGAGGGTTTC+AGG | 0.180121 | 1.1:+66967665 | MS.gene005816:CDS |
| TCCCCACTATGTGCTTCTTC+TGG | 0.182525 | 1.1:-66970225 | None:intergenic |
| TTGGAAACTTCTTCTTTAAT+AGG | 0.208642 | 1.1:+66969143 | MS.gene005816:CDS |
| GTACTTCAGTGGATCATAAA+AGG | 0.224393 | 1.1:-66970127 | None:intergenic |
| TGAAAAGGGAACCTCAATTT+TGG | 0.235304 | 1.1:-66958665 | None:intergenic |
| GATATGAGAATTATAGTCTT+TGG | 0.249660 | 1.1:+66963393 | MS.gene005816:CDS |
| GTACAAAGCCCACAATATTA+TGG | 0.253124 | 1.1:+66964032 | MS.gene005816:CDS |
| ATGAATTACCTAATGCTCTT+TGG | 0.263678 | 1.1:-66964277 | None:intergenic |
| CTTCTGTTCTTGTTCATTGC+AGG | 0.263762 | 1.1:+66967476 | MS.gene005816:CDS |
| AAGCCCAACGAAGGTGAAAT+TGG | 0.268121 | 1.1:-66970200 | None:intergenic |
| CCTCTGAATGTCCGATAATA+TGG | 0.271777 | 1.1:-66967657 | None:intergenic |
| GATCTTTATGCTTATTCGTC+TGG | 0.282063 | 1.1:+66964055 | MS.gene005816:CDS |
| GTCGGGGCTAACGCTGCTGC+TGG | 0.282113 | 1.1:-66970168 | None:intergenic |
| GCCGTCTGCCTGTAATTTCT+TGG | 0.302001 | 1.1:+66964441 | MS.gene005816:CDS |
| TTTCATTATTAAGGCTTTCC+TGG | 0.313939 | 1.1:+66969087 | MS.gene005816:intron |
| CAGCGTTAGCCCCGACTATA+TGG | 0.337540 | 1.1:+66970175 | MS.gene005816:CDS |
| AGAGACATGGTGGGTCGATA+TGG | 0.337896 | 1.1:+66967326 | MS.gene005816:intron |
| ACTCTGGCACATTGTATAAC+TGG | 0.340220 | 1.1:-66964233 | None:intergenic |
| TGGATGTTTGTGGGCATACT+TGG | 0.348237 | 1.1:+66970059 | MS.gene005816:CDS |
| TGTTGCTTGATCCATATTAT+CGG | 0.355341 | 1.1:+66967646 | MS.gene005816:CDS |
| TGGTTGTTCCAAAGAGCATT+AGG | 0.357442 | 1.1:+66964269 | MS.gene005816:CDS |
| TCGGGGCTAACGCTGCTGCT+GGG | 0.359394 | 1.1:-66970167 | None:intergenic |
| AAGCGTGCAATTCAGTCAAT+TGG | 0.363650 | 1.1:+66970667 | MS.gene005816:CDS |
| CCCCACTATGTGCTTCTTCT+GGG | 0.364165 | 1.1:-66970224 | None:intergenic |
| GGAGAGACAAAACGCGAAAT+TGG | 0.366962 | 1.1:-66958758 | None:intergenic |
| TGCATGCTTTCTTCTCGCTT+TGG | 0.368459 | 1.1:+66969124 | MS.gene005816:CDS |
| ATTTAGGAACTCAATTTACT+TGG | 0.383255 | 1.1:-66971031 | None:intergenic |
| CTGACTCCTCCACCGGTAGC+TGG | 0.384134 | 1.1:+66958626 | MS.gene005816:CDS |
| AGCCCAACGAAGGTGAAATT+GGG | 0.384756 | 1.1:-66970199 | None:intergenic |
| GATGATGGAAACGATGTTAT+TGG | 0.384760 | 1.1:+66970853 | MS.gene005816:CDS |
| TCACCAATGCGCCAGCCATC+AGG | 0.388168 | 1.1:+66967981 | MS.gene005816:CDS |
| TGTGGGCATACTTGGCTGAT+AGG | 0.391042 | 1.1:+66970067 | MS.gene005816:CDS |
| CGGGGCTAACGCTGCTGCTG+GGG | 0.391769 | 1.1:-66970166 | None:intergenic |
| CATGAGTGTCTATGAATTCT+CGG | 0.393322 | 1.1:-66966780 | None:intergenic |
| TGCTGTGATTAACGACAAAA+AGG | 0.394698 | 1.1:+66970798 | MS.gene005816:CDS |
| ACGTGTCTTTCGAGTTATCT+AGG | 0.396410 | 1.1:+66967934 | MS.gene005816:CDS |
| CTCCATCTTTCGTACGAAAC+GGG | 0.397679 | 1.1:-66970897 | None:intergenic |
| CAACTAGGTAGCCAGTTTGT+TGG | 0.399476 | 1.1:+66970949 | MS.gene005816:CDS |
| GGCTGGCGCATTGGTGATGA+TGG | 0.401459 | 1.1:-66967975 | None:intergenic |
| ATCTTTATGCTTATTCGTCT+GGG | 0.406653 | 1.1:+66964056 | MS.gene005816:CDS |
| AAGTTTGGATGTGCTCCCGC+TGG | 0.409201 | 1.1:-66970745 | None:intergenic |
| GGCCCCAATTTCACCTTCGT+TGG | 0.409598 | 1.1:+66970196 | MS.gene005816:CDS |
| CTAGAGGAACAATACAAGTT+TGG | 0.409967 | 1.1:-66970760 | None:intergenic |
| CTGCTTCAGTATCAACCCTT+GGG | 0.412831 | 1.1:+66967374 | MS.gene005816:CDS |
| GAGACATGGTGGGTCGATAT+GGG | 0.413049 | 1.1:+66967327 | MS.gene005816:intron |
| GAAATTGGGGCCATATAGTC+GGG | 0.423097 | 1.1:-66970185 | None:intergenic |
| AATTAGCAAGTGAAACTAAC+TGG | 0.423507 | 1.1:-66967623 | None:intergenic |
| CCATCTCATGCACATAGTTC+AGG | 0.427292 | 1.1:+66968020 | MS.gene005816:CDS |
| TGCCCGTTTCGTACGAAAGA+TGG | 0.429206 | 1.1:+66970895 | MS.gene005816:CDS |
| TTGAAAGTTGTGGATGTTTG+TGG | 0.432364 | 1.1:+66970049 | MS.gene005816:CDS |
| CGTTCTTCCCAACCTTTAGT+TGG | 0.432900 | 1.1:+66964584 | MS.gene005816:CDS |
| AAACTTGTGGCCGCACTTTG+TGG | 0.438003 | 1.1:+66965058 | MS.gene005816:CDS |
| GTGGGAACACCGTCTATCTC+TGG | 0.440063 | 1.1:+66967903 | MS.gene005816:CDS |
| CCAGAGTTATCCATTTGCTT+TGG | 0.442979 | 1.1:+66964249 | MS.gene005816:CDS |
| CTTTGTGGCAACCTTGATGA+TGG | 0.445905 | 1.1:+66965073 | MS.gene005816:CDS |
| GCCCCAATTTCACCTTCGTT+GGG | 0.446668 | 1.1:+66970197 | MS.gene005816:CDS |
| TACAAAGCCCACAATATTAT+GGG | 0.447087 | 1.1:+66964033 | MS.gene005816:CDS |
| AGCTTCTCATCATGCTTCAA+TGG | 0.447240 | 1.1:+66964147 | MS.gene005816:CDS |
| TCGCTTTCAAACCAACAAAC+TGG | 0.447453 | 1.1:-66970960 | None:intergenic |
| TTCTCCACAAGTCATTTGAC+AGG | 0.447739 | 1.1:-66964195 | None:intergenic |
| TTATCTAGGCAGTCTTCAAC+TGG | 0.448887 | 1.1:+66967948 | MS.gene005816:CDS |
| AGTTGAGCACAACCACCATT+TGG | 0.453492 | 1.1:-66970931 | None:intergenic |
| CAAAGACTGCTGCAGGTGAT+TGG | 0.455555 | 1.1:+66962977 | MS.gene005816:CDS |
| TTGCACGGAATTTGCAAGCC+TGG | 0.457643 | 1.1:-66964415 | None:intergenic |
| GGATGACACCAAGAAATTAC+AGG | 0.458798 | 1.1:-66964449 | None:intergenic |
| TTTCTTTGGTAGTGATGGAT+GGG | 0.460490 | 1.1:+66967590 | MS.gene005816:intron |
| GTATCAACCCTTGGGGATAG+TGG | 0.461368 | 1.1:+66967382 | MS.gene005816:CDS |
| GAGGTAATGTCCCTGATGGC+TGG | 0.463496 | 1.1:-66967992 | None:intergenic |
| ACTAGAAAAGTTATTGCCCT+TGG | 0.465404 | 1.1:+66962246 | MS.gene005816:CDS |
| TGGAGAGGTGTTCTTAAAAG+TGG | 0.466314 | 1.1:-66964083 | None:intergenic |
| TGTCTTGTTAAACTTCTCAA+TGG | 0.471583 | 1.1:-66962286 | None:intergenic |
| TGCTCGTGTTGCTATGGAAA+AGG | 0.473459 | 1.1:+66967453 | MS.gene005816:CDS |
| TGAAAGTTGTGGATGTTTGT+GGG | 0.475142 | 1.1:+66970050 | MS.gene005816:CDS |
| GAGGATAACCAAAGAAAATA+CGG | 0.475246 | 1.1:+66970639 | MS.gene005816:CDS |
| GGCATCCCAGCTACCGGTGG+AGG | 0.478455 | 1.1:-66958632 | None:intergenic |
| AACTGTCATCAATTGAAAGT+TGG | 0.478726 | 1.1:-66970999 | None:intergenic |
| CAAACTTGTATTGTTCCTCT+AGG | 0.478848 | 1.1:+66970761 | MS.gene005816:CDS |
| CATGAGACCAACTAAAGGTT+GGG | 0.480942 | 1.1:-66964591 | None:intergenic |
| GATTGCTGCTCGTGTTGCTA+TGG | 0.482381 | 1.1:+66967447 | MS.gene005816:CDS |
| GGCATACTTGGCTGATAGGC+GGG | 0.484201 | 1.1:+66970071 | MS.gene005816:CDS |
| GTAATTTCTTGGTGTCATCC+TGG | 0.484344 | 1.1:+66964452 | MS.gene005816:CDS |
| TTTGGAACAACCAAAGCAAA+TGG | 0.486763 | 1.1:-66964259 | None:intergenic |
| ATGGGTTCTGTTTAGAGACA+TGG | 0.490337 | 1.1:+66967313 | MS.gene005816:intron |
| CCTTGAATGGACCAAAATTG+AGG | 0.495563 | 1.1:+66958654 | MS.gene005816:CDS |
| GTAGCTGGGATGCCCTTGAA+TGG | 0.505594 | 1.1:+66958641 | MS.gene005816:CDS |
| GTCCCTGATGGCTGGCGCAT+TGG | 0.505641 | 1.1:-66967984 | None:intergenic |
| TGACTCCTCCACCGGTAGCT+GGG | 0.505756 | 1.1:+66958627 | MS.gene005816:CDS |
| GGGGCTAACGCTGCTGCTGG+GGG | 0.506577 | 1.1:-66970165 | None:intergenic |
| TCTGCTTCAGTATCAACCCT+TGG | 0.507545 | 1.1:+66967373 | MS.gene005816:CDS |
| GCTAATGGAGCCATGGGAGG+TGG | 0.510157 | 1.1:+66966571 | MS.gene005816:CDS |
| TGCAATGTGTTTGAAAGTTG+TGG | 0.511797 | 1.1:+66970039 | MS.gene005816:CDS |
| CCTCCATCTTTCGTACGAAA+CGG | 0.512251 | 1.1:-66970898 | None:intergenic |
| TACTTCAGTGGATCATAAAA+GGG | 0.512507 | 1.1:-66970126 | None:intergenic |
| GGCTGCAGGTGGCCAAATGG+TGG | 0.513018 | 1.1:+66970919 | MS.gene005816:CDS |
| TCATCCAATAATCGCACCAT+TGG | 0.515465 | 1.1:-66964103 | None:intergenic |
| AGCGTGCAATTCAGTCAATT+GGG | 0.518763 | 1.1:+66970668 | MS.gene005816:CDS |
| TGCATTAGCTAATGGAGCCA+TGG | 0.520047 | 1.1:+66966564 | MS.gene005816:CDS |
| TTTAGGAACTCAATTTACTT+GGG | 0.520091 | 1.1:-66971030 | None:intergenic |
| TGAAATTGGGGCCATATAGT+CGG | 0.520224 | 1.1:-66970186 | None:intergenic |
| GGAGGCTGCAGGTGGCCAAA+TGG | 0.523171 | 1.1:+66970916 | MS.gene005816:CDS |
| GCAGAAAACTCAAACGCAAA+AGG | 0.523563 | 1.1:-66968987 | None:intergenic |
| GTACGAAAGATGGAGGCTGC+AGG | 0.523660 | 1.1:+66970905 | MS.gene005816:CDS |
| CCATATTATCGGACATTCAG+AGG | 0.523878 | 1.1:+66967657 | MS.gene005816:CDS |
| TCATGAGACCAACTAAAGGT+TGG | 0.524291 | 1.1:-66964592 | None:intergenic |
| TGCTAGTGGTATTGTTCCAA+GGG | 0.525165 | 1.1:-66962262 | None:intergenic |
| TAAAGATCCCATAATATTGT+GGG | 0.526056 | 1.1:-66964040 | None:intergenic |
| ACCAACACAAAGACTGCTGC+AGG | 0.527140 | 1.1:+66962970 | MS.gene005816:CDS |
| GGTGTGGCACGGTGGTGTCT+CGG | 0.527582 | 1.1:-66958580 | None:intergenic |
| TTCAAGGGCATCCCAGCTAC+CGG | 0.528328 | 1.1:-66958638 | None:intergenic |
| TTGCTAGTGGTATTGTTCCA+AGG | 0.536488 | 1.1:-66962263 | None:intergenic |
| ACCTCTTTGAGCCATCATCA+AGG | 0.539191 | 1.1:-66965084 | None:intergenic |
| TCACCCTGTCAAATGACTTG+TGG | 0.539321 | 1.1:+66964191 | MS.gene005816:CDS |
| CACCAATGCGCCAGCCATCA+GGG | 0.539335 | 1.1:+66967982 | MS.gene005816:CDS |
| TGCCCAGAAGAAGCACATAG+TGG | 0.542796 | 1.1:+66970222 | MS.gene005816:CDS |
| ACAGAAGATGACGGTGATGA+TGG | 0.543703 | 1.1:+66970838 | MS.gene005816:CDS |
| ATAAAGATCCCATAATATTG+TGG | 0.545906 | 1.1:-66964041 | None:intergenic |
| ACACCGTCTATCTCTGGAAG+TGG | 0.547187 | 1.1:+66967909 | MS.gene005816:CDS |
| AGCAAGAAATCAAGATTCGC+GGG | 0.549836 | 1.1:-66958779 | None:intergenic |
| TTCAGCATGCAATGATTGCA+TGG | 0.551343 | 1.1:-66970569 | None:intergenic |
| AAGATTCACATTTCTAGTAG+TGG | 0.553387 | 1.1:+66970694 | MS.gene005816:CDS |
| GCATTAGCTAATGGAGCCAT+GGG | 0.557242 | 1.1:+66966565 | MS.gene005816:CDS |
| GTTCCCACACGATCAGAAAA+CGG | 0.557307 | 1.1:-66967888 | None:intergenic |
| AATGACTTGTGGAGAATAAG+TGG | 0.557540 | 1.1:+66964202 | MS.gene005816:CDS |
| CTATGTGCATGAGATGGAGC+TGG | 0.559073 | 1.1:-66968014 | None:intergenic |
| GTGTCTCTTAGAGAGGTTGT+TGG | 0.559932 | 1.1:-66958601 | None:intergenic |
| AGGCTAAAGAAGTGGCAGAA+AGG | 0.561343 | 1.1:+66970524 | MS.gene005816:intron |
| CACTCATGGCAGAACATCAT+CGG | 0.561431 | 1.1:+66966795 | MS.gene005816:CDS |
| GCCCAGAAGAAGCACATAGT+GGG | 0.563525 | 1.1:+66970223 | MS.gene005816:CDS |
| GCTGATAGGCGGGCATCAGA+AGG | 0.564887 | 1.1:+66970081 | MS.gene005816:CDS |
| CTTGTCAATACAGATGATGC+AGG | 0.565899 | 1.1:+66961452 | MS.gene005816:CDS |
| GGGAGATTGAAGCACAATGT+AGG | 0.566070 | 1.1:+66970244 | MS.gene005816:CDS |
| GGTGGGTCGATATGGGGTGG+CGG | 0.570020 | 1.1:+66967334 | MS.gene005816:CDS |
| GCTCGATGACGAACAAGTTG+TGG | 0.571654 | 1.1:+66958799 | MS.gene005816:CDS |
| AATGGTGGTTGTGCTCAACT+AGG | 0.572409 | 1.1:+66970934 | MS.gene005816:CDS |
| CAACCCTTGGGGATAGTGGA+TGG | 0.573284 | 1.1:+66967386 | MS.gene005816:CDS |
| GGTGTTTACTTTCAGGGACA+CGG | 0.575985 | 1.1:+66961422 | MS.gene005816:intron |
| TGATTCTGAACCACCTCCCA+TGG | 0.576170 | 1.1:-66966581 | None:intergenic |
| ACCTGCAGCAGTCTTTGTGT+TGG | 0.577544 | 1.1:-66962971 | None:intergenic |
| TTGTATTGTTCCTCTAGGCA+AGG | 0.577976 | 1.1:+66970766 | MS.gene005816:CDS |
| TTGGTAGTGATGGATGGGAT+AGG | 0.578391 | 1.1:+66967595 | MS.gene005816:intron |
| AAGTGATGATGAAGTGCTCC+AGG | 0.578623 | 1.1:+66964397 | MS.gene005816:intron |
| AACTTCTCAATGGTTGCTAG+TGG | 0.579962 | 1.1:-66962276 | None:intergenic |
| ATCAAGGTTGCCACAAAGTG+CGG | 0.580650 | 1.1:-66965068 | None:intergenic |
| GACATTGAAAACAACCCAGC+GGG | 0.581375 | 1.1:+66970730 | MS.gene005816:CDS |
| GGGCATACTTGGCTGATAGG+CGG | 0.581465 | 1.1:+66970070 | MS.gene005816:CDS |
| TTGGTCTCATGATGAATATG+AGG | 0.582357 | 1.1:+66964603 | MS.gene005816:CDS |
| CAGGCAGACGGCATCTTGCA+CGG | 0.585052 | 1.1:-66964430 | None:intergenic |
| CAAGTCATTTGACAGGGTGA+AGG | 0.587579 | 1.1:-66964188 | None:intergenic |
| GAGAGGTTGTTGGTGTGGCA+CGG | 0.588469 | 1.1:-66958591 | None:intergenic |
| GGTTCTGTTTAGAGACATGG+TGG | 0.592082 | 1.1:+66967316 | MS.gene005816:intron |
| AGTTTGGATGTGCTCCCGCT+GGG | 0.595582 | 1.1:-66970744 | None:intergenic |
| GAGCAAGAAATCAAGATTCG+CGG | 0.598188 | 1.1:-66958780 | None:intergenic |
| CATATTATCGGACATTCAGA+GGG | 0.598656 | 1.1:+66967658 | MS.gene005816:CDS |
| CGAGAATTCATAGACACTCA+TGG | 0.599136 | 1.1:+66966781 | MS.gene005816:CDS |
| TCTTAGAGAGGTTGTTGGTG+TGG | 0.603090 | 1.1:-66958596 | None:intergenic |
| TTCATCATGAGACCAACTAA+AGG | 0.603931 | 1.1:-66964596 | None:intergenic |
| CCAAAGCAAATGGATAACTC+TGG | 0.604966 | 1.1:-66964249 | None:intergenic |
| GTCAGATGTGTCTCTTAGAG+AGG | 0.605249 | 1.1:-66958608 | None:intergenic |
| AGAGGACCACTGTACTTCAG+TGG | 0.607252 | 1.1:-66970138 | None:intergenic |
| GAGGTGTTCTTAAAAGTGGA+AGG | 0.610307 | 1.1:-66964079 | None:intergenic |
| CCTGAACTATGTGCATGAGA+TGG | 0.611367 | 1.1:-66968020 | None:intergenic |
| CGAAAGATGGAGGCTGCAGG+TGG | 0.612620 | 1.1:+66970908 | MS.gene005816:CDS |
| ACCAAGAAATTACAGGCAGA+CGG | 0.615128 | 1.1:-66964442 | None:intergenic |
| CATTATTAAGGCTTTCCTGG+TGG | 0.615141 | 1.1:+66969090 | MS.gene005816:intron |
| ATGGTAACAGGCTAAAGAAG+TGG | 0.615148 | 1.1:+66970516 | MS.gene005816:intron |
| GCTGGAGGTAATGTCCCTGA+TGG | 0.619293 | 1.1:-66967996 | None:intergenic |
| AAGGGCATCCCAGCTACCGG+TGG | 0.625691 | 1.1:-66958635 | None:intergenic |
| CATGGCAGAACATCATCGGA+TGG | 0.626026 | 1.1:+66966799 | MS.gene005816:CDS |
| AGACATGGTGGGTCGATATG+GGG | 0.626724 | 1.1:+66967328 | MS.gene005816:CDS |
| GACACATCTGACTCCTCCAC+CGG | 0.627294 | 1.1:+66958619 | MS.gene005816:CDS |
| TGCAGTCTAAGAAGTCCACC+AGG | 0.629081 | 1.1:-66969105 | None:intergenic |
| ATAACCATCCACTATCCCCA+AGG | 0.631610 | 1.1:-66967390 | None:intergenic |
| GCTGGCGCATTGGTGATGAT+GGG | 0.632732 | 1.1:-66967974 | None:intergenic |
| TCAATGGACATGATTGAAAG+TGG | 0.636766 | 1.1:+66964163 | MS.gene005816:CDS |
| CATGGTGGGTCGATATGGGG+TGG | 0.639162 | 1.1:+66967331 | MS.gene005816:CDS |
| CAATAATCGCACCATTGGAG+AGG | 0.640586 | 1.1:-66964098 | None:intergenic |
| ATATCGCTGATGCGAGACCA+AGG | 0.640867 | 1.1:+66966536 | MS.gene005816:CDS |
| TCTCCACAAGTCATTTGACA+GGG | 0.643859 | 1.1:-66964194 | None:intergenic |
| GTCTCATGATGAATATGAGG+AGG | 0.645065 | 1.1:+66964606 | MS.gene005816:CDS |
| CCGTTTCGTACGAAAGATGG+AGG | 0.645973 | 1.1:+66970898 | MS.gene005816:CDS |
| CTTCTGGGCAAGCCCAACGA+AGG | 0.647320 | 1.1:-66970209 | None:intergenic |
| CAGCTATGAACACGGCAAAG+AGG | 0.651365 | 1.1:+66970620 | MS.gene005816:CDS |
| GATAGGCGGGCATCAGAAGG+AGG | 0.651664 | 1.1:+66970084 | MS.gene005816:CDS |
| CCCAGAAGAAGCACATAGTG+GGG | 0.655565 | 1.1:+66970224 | MS.gene005816:CDS |
| GCCCAACGAAGGTGAAATTG+GGG | 0.657364 | 1.1:-66970198 | None:intergenic |
| TTTCCACTTCCAGAGATAGA+CGG | 0.662759 | 1.1:-66967912 | None:intergenic |
| TGCTTCAGTATCAACCCTTG+GGG | 0.671712 | 1.1:+66967375 | MS.gene005816:CDS |
| ACCTTGATGATGGCTCAAAG+AGG | 0.671976 | 1.1:+66965083 | MS.gene005816:CDS |
| TTAGCTAATGGAGCCATGGG+AGG | 0.673806 | 1.1:+66966568 | MS.gene005816:CDS |
| TATGATCCACTGAAGTACAG+TGG | 0.674605 | 1.1:+66970132 | MS.gene005816:CDS |
| GAATATCTCAGCTATGAACA+CGG | 0.684929 | 1.1:+66970612 | MS.gene005816:CDS |
| ACTACTTGATCCTTGCCTAG+AGG | 0.684942 | 1.1:-66970776 | None:intergenic |
| TAACCATCCACTATCCCCAA+GGG | 0.687207 | 1.1:-66967389 | None:intergenic |
| ATGTCTGTAACAGAAGATGA+CGG | 0.688061 | 1.1:+66970829 | MS.gene005816:CDS |
| GTTCTGTTTAGAGACATGGT+GGG | 0.696169 | 1.1:+66967317 | MS.gene005816:intron |
| AAATTGGGGCCATATAGTCG+GGG | 0.720716 | 1.1:-66970184 | None:intergenic |
| TGTGCATGAGATGGAGCTGG+AGG | 0.734337 | 1.1:-66968011 | None:intergenic |
| AGGTTGTTGGTGTGGCACGG+TGG | 0.761595 | 1.1:-66958588 | None:intergenic |
| ATTGTGTGTCACAACTACTG+CGG | 0.765787 | 1.1:+66968958 | MS.gene005816:CDS |
| TGACATTGAAAACAACCCAG+CGG | 0.773121 | 1.1:+66970729 | MS.gene005816:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 66958571 | 66971038 | 66958571 | ID=MS.gene005816 |
| chr1.1 | mRNA | 66958571 | 66971038 | 66958571 | ID=MS.gene005816.t1;Parent=MS.gene005816 |
| chr1.1 | exon | 66958571 | 66958675 | 66958571 | ID=MS.gene005816.t1.exon1;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66958571 | 66958675 | 66958571 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66958758 | 66958826 | 66958758 | ID=MS.gene005816.t1.exon2;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66958758 | 66958826 | 66958758 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66961437 | 66961511 | 66961437 | ID=MS.gene005816.t1.exon3;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66961437 | 66961511 | 66961437 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66962237 | 66962308 | 66962237 | ID=MS.gene005816.t1.exon4;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66962237 | 66962308 | 66962237 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66962929 | 66962998 | 66962929 | ID=MS.gene005816.t1.exon5;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66962929 | 66962998 | 66962929 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66963388 | 66963437 | 66963388 | ID=MS.gene005816.t1.exon6;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66963388 | 66963437 | 66963388 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66964001 | 66964290 | 66964001 | ID=MS.gene005816.t1.exon7;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66964001 | 66964290 | 66964001 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66964400 | 66964473 | 66964400 | ID=MS.gene005816.t1.exon8;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66964400 | 66964473 | 66964400 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66964564 | 66964627 | 66964564 | ID=MS.gene005816.t1.exon9;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66964564 | 66964627 | 66964564 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66965045 | 66965104 | 66965045 | ID=MS.gene005816.t1.exon10;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66965045 | 66965104 | 66965045 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66966528 | 66966627 | 66966528 | ID=MS.gene005816.t1.exon11;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66966528 | 66966627 | 66966528 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66966724 | 66966837 | 66966724 | ID=MS.gene005816.t1.exon12;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66966724 | 66966837 | 66966724 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66967328 | 66967497 | 66967328 | ID=MS.gene005816.t1.exon13;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66967328 | 66967497 | 66967328 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66967602 | 66967686 | 66967602 | ID=MS.gene005816.t1.exon14;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66967602 | 66967686 | 66967602 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66967852 | 66968067 | 66967852 | ID=MS.gene005816.t1.exon15;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66967852 | 66968067 | 66967852 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66968951 | 66969010 | 66968951 | ID=MS.gene005816.t1.exon16;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66968951 | 66969010 | 66968951 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66969100 | 66969164 | 66969100 | ID=MS.gene005816.t1.exon17;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66969100 | 66969164 | 66969100 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66970020 | 66970299 | 66970020 | ID=MS.gene005816.t1.exon18;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66970020 | 66970299 | 66970020 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| chr1.1 | exon | 66970526 | 66971038 | 66970526 | ID=MS.gene005816.t1.exon19;Parent=MS.gene005816.t1 |
| chr1.1 | CDS | 66970526 | 66971038 | 66970526 | ID=cds.MS.gene005816.t1;Parent=MS.gene005816.t1 |
| Gene Sequence |
| Protein sequence |
