Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52620.t1 | XP_013469029.1 | 88.6 | 632 | 72 | 0 | 1 | 632 | 1 | 632 | 1.90E-194 | 689.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52620.t1 | A0A072VN55 | 88.6 | 632 | 72 | 0 | 1 | 632 | 1 | 632 | 1.4e-194 | 689.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049236 | MS.gene52620 | -0.840824 | 6.89E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene52620 | 0.844932 | 5.57E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene52620 | 0.821367 | 4.19E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene52620 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene049491 | MS.gene52620 | 0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene52620 | 0.855831 | 4.84E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene52620 | 0.851997 | 6.16E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene52620 | 0.83402 | 3.82E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene52620 | 0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene050215 | MS.gene52620 | 0.830706 | 2.52E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene52620 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene050397 | MS.gene52620 | 0.826906 | 2.10E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene52620 | 0.818 | 2.46E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene52620 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene52620 | 0.836257 | 1.04E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene52620 | 0.818383 | 2.02E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene52620 | 0.819493 | 1.13E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene52620 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene52620 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene52620 | 0.80754 | 4.81E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene52620 | 0.814838 | 1.26E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene52620 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene52620 | 0.828597 | 8.23E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene52620 | 0.854597 | 1.11E-61 | -1.69E-46 |
| MS.gene051877 | MS.gene52620 | 0.853811 | 1.87E-61 | -1.69E-46 |
| MS.gene052078 | MS.gene52620 | 0.82397 | 1.04E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene52620 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene52620 | 0.844863 | 5.81E-59 | -1.69E-46 |
| MS.gene052207 | MS.gene52620 | 0.805821 | 1.11E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene52620 | 0.835829 | 1.34E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene52620 | 0.834511 | 2.87E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene52620 | 0.816927 | 4.30E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene52620 | 0.825175 | 5.41E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene52620 | 0.805544 | 1.27E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene52620 | 0.813657 | 2.29E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene52620 | 0.810258 | 1.26E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene52620 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene52620 | 0.846968 | 1.56E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene52620 | 0.807041 | 6.13E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene52620 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene52620 | 0.808527 | 2.96E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene52620 | 0.818006 | 2.46E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene52620 | 0.836419 | 9.46E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene52620 | 0.840385 | 8.98E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene52620 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene52620 | 0.834337 | 3.18E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene52620 | 0.830216 | 3.33E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene52620 | 0.822593 | 2.18E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene52620 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene52620 | 0.807446 | 5.04E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene52620 | 0.823143 | 1.62E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene52620 | 0.812818 | 3.50E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene52620 | 0.831456 | 1.65E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene52620 | 0.867124 | 1.72E-65 | -1.69E-46 |
| MS.gene055390 | MS.gene52620 | 0.834841 | 2.37E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene52620 | 0.849448 | 3.21E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene52620 | 0.833585 | 4.90E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene52620 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene52620 | 0.844637 | 6.68E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene52620 | 0.808971 | 2.38E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene52620 | 0.864393 | 1.26E-64 | -1.69E-46 |
| MS.gene056422 | MS.gene52620 | 0.817765 | 2.78E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene52620 | 0.805935 | 1.05E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene52620 | 0.85116 | 1.06E-60 | -1.69E-46 |
| MS.gene056902 | MS.gene52620 | 0.806781 | 6.96E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene52620 | 0.852973 | 3.25E-61 | -1.69E-46 |
| MS.gene056933 | MS.gene52620 | 0.850341 | 1.81E-60 | -1.69E-46 |
| MS.gene056935 | MS.gene52620 | 0.848103 | 7.58E-60 | -1.69E-46 |
| MS.gene056942 | MS.gene52620 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene52620 | 0.8356 | 1.53E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene52620 | 0.862142 | 6.25E-64 | -1.69E-46 |
| MS.gene057448 | MS.gene52620 | 0.82668 | 2.38E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene52620 | 0.831448 | 1.66E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene52620 | 0.826349 | 2.85E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene52620 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene057478 | MS.gene52620 | -0.829742 | 4.34E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene52620 | 0.813691 | 2.25E-51 | -1.69E-46 |
| MS.gene057779 | MS.gene52620 | 0.835885 | 1.29E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene52620 | 0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene52620 | 0.832495 | 9.15E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene52620 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene52620 | 0.85731 | 1.78E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene52620 | 0.813068 | 3.09E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene52620 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene05842 | MS.gene52620 | 0.817405 | 3.35E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene52620 | 0.887106 | 1.91E-72 | -1.69E-46 |
| MS.gene058928 | MS.gene52620 | 0.842081 | 3.21E-58 | -1.69E-46 |
| MS.gene058995 | MS.gene52620 | 0.8181 | 2.34E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene52620 | 0.864374 | 1.27E-64 | -1.69E-46 |
| MS.gene059294 | MS.gene52620 | 0.848175 | 7.24E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene52620 | 0.805359 | 1.39E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene52620 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene52620 | 0.85428 | 1.37E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene52620 | 0.848706 | 5.16E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene52620 | 0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene52620 | 0.866602 | 2.53E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene52620 | 0.849705 | 2.72E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene52620 | 0.845386 | 4.19E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene52620 | 0.850076 | 2.15E-60 | -1.69E-46 |
| MS.gene059807 | MS.gene52620 | 0.827234 | 1.75E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene52620 | 0.861949 | 7.16E-64 | -1.69E-46 |
| MS.gene06037 | MS.gene52620 | 0.817576 | 3.07E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene52620 | 0.840329 | 9.29E-58 | -1.69E-46 |
| MS.gene060559 | MS.gene52620 | 0.850886 | 1.27E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene52620 | 0.849192 | 3.79E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene52620 | 0.840958 | 6.35E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene52620 | 0.855772 | 5.04E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene52620 | 0.803168 | 3.96E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene52620 | 0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene061051 | MS.gene52620 | -0.823917 | 1.07E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene52620 | 0.821196 | 4.59E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52620.t1 | MTR_1g082215 | 94.937 | 632 | 32 | 0 | 1 | 632 | 1 | 632 | 0.0 | 1161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52620.t1 | AT5G27330 | 25.354 | 706 | 369 | 16 | 1 | 629 | 1 | 625 | 1.10e-35 | 142 |
| MS.gene52620.t1 | AT3G05130 | 24.714 | 700 | 367 | 18 | 1 | 619 | 1 | 621 | 1.79e-24 | 108 |
Find 133 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACCCAGATCACTGAATT+AGG | 0.168138 | 1.1:-60849742 | MS.gene52620:CDS |
| AGGGAGAAGATGAAGGATTT+AGG | 0.187545 | 1.1:-60849658 | MS.gene52620:CDS |
| AACAAATAAGGTGGAGAATT+TGG | 0.209500 | 1.1:-60848651 | MS.gene52620:CDS |
| GGGAGAAGATGAAGGATTTA+GGG | 0.269179 | 1.1:-60849657 | MS.gene52620:CDS |
| TGGTGGTGGTTGTGGGGTTA+AGG | 0.273734 | 1.1:+60849951 | None:intergenic |
| TGGTGGATGGTGGTGGTTGT+GGG | 0.274390 | 1.1:+60849944 | None:intergenic |
| TGTGGTCTAGGGTTTGAGAT+TGG | 0.283893 | 1.1:+60849977 | None:intergenic |
| TGTCTCAGGTTAATCATTAT+AGG | 0.291389 | 1.1:-60848964 | MS.gene52620:CDS |
| GCTTGAGAAGGACTGGGATT+TGG | 0.303984 | 1.1:-60849536 | MS.gene52620:CDS |
| TGTTTATAGGACCCTGGATA+TGG | 0.304234 | 1.1:-60849179 | MS.gene52620:CDS |
| TTGGTGGATGGTGGTGGTTG+TGG | 0.310014 | 1.1:+60849943 | None:intergenic |
| CACTGTTGCACATGTGTCTA+AGG | 0.328802 | 1.1:-60848381 | MS.gene52620:CDS |
| GTGGTCTAGGGTTTGAGATT+GGG | 0.339700 | 1.1:+60849978 | None:intergenic |
| ATATGACGAGGCAACAAATA+AGG | 0.371426 | 1.1:-60848663 | MS.gene52620:CDS |
| AGACCCAGATCACTGAATTA+GGG | 0.375216 | 1.1:-60849741 | MS.gene52620:CDS |
| GATGTTGGAAAATAGTAAAT+TGG | 0.379157 | 1.1:-60849260 | MS.gene52620:CDS |
| AGGGGAGGGATACTGTTTAT+AGG | 0.389451 | 1.1:-60849192 | MS.gene52620:CDS |
| GTTGAAGGAGAAGATTGATT+TGG | 0.396255 | 1.1:-60849473 | MS.gene52620:CDS |
| CTGAATGCGGTTTCTGTGAT+TGG | 0.397932 | 1.1:+60849855 | None:intergenic |
| AATCAATTCAAAGCAAACTT+TGG | 0.409026 | 1.1:-60848417 | MS.gene52620:CDS |
| AGCTAGAGATGAGGTTGAGA+AGG | 0.410360 | 1.1:-60849107 | MS.gene52620:CDS |
| GAAACCCTAATTCAGTGATC+TGG | 0.411589 | 1.1:+60849737 | None:intergenic |
| GAAGGAGAAGAAAGAGGCTG+AGG | 0.417267 | 1.1:-60849446 | MS.gene52620:CDS |
| TCTGCGTCTGATGCACATAA+AGG | 0.420247 | 1.1:-60848209 | MS.gene52620:CDS |
| GCAGTCACAAGTTGTGGAAA+TGG | 0.421287 | 1.1:-60848861 | MS.gene52620:CDS |
| TTAAGAGAGAATTGGAGAAT+AGG | 0.439435 | 1.1:-60849156 | MS.gene52620:CDS |
| GGATATGGTTAAGAGAGAAT+TGG | 0.440956 | 1.1:-60849164 | MS.gene52620:CDS |
| AAAATTGTAGCTAGAGAGTC+TGG | 0.443169 | 1.1:-60849007 | MS.gene52620:CDS |
| GAAGGATTTAGGGTTGTGTC+TGG | 0.450014 | 1.1:-60849647 | MS.gene52620:CDS |
| GAAGATTGATTTGGTGGTGA+AGG | 0.452814 | 1.1:-60849464 | MS.gene52620:CDS |
| TTGAGGAGCTTGAGAAGGAC+TGG | 0.455210 | 1.1:-60849543 | MS.gene52620:CDS |
| TCATCATTGGTGGATGGTGG+TGG | 0.456751 | 1.1:+60849937 | None:intergenic |
| TAAATTGGTTGGTGAGAAGA+AGG | 0.457718 | 1.1:-60849245 | MS.gene52620:CDS |
| ATTCTCTCTTAACCATATCC+AGG | 0.459211 | 1.1:+60849167 | None:intergenic |
| CTGAACAGATGGGTCATCAT+TGG | 0.459753 | 1.1:+60849924 | None:intergenic |
| TAAGAATGCTGTTGAGGAAG+TGG | 0.466160 | 1.1:-60848798 | MS.gene52620:CDS |
| GAGGTTGAGAAGGTTAAAGT+TGG | 0.473556 | 1.1:-60849097 | MS.gene52620:CDS |
| AGAGGAATGTTGAGAAGATG+AGG | 0.480560 | 1.1:-60849615 | MS.gene52620:CDS |
| GTATGAGGTTTCTGTTCAAA+GGG | 0.485446 | 1.1:-60849677 | MS.gene52620:CDS |
| AATTTGGAGTTGCAAGTTGT+GGG | 0.486287 | 1.1:-60848635 | MS.gene52620:CDS |
| ACGGAAACTGTTTGATGAAA+AGG | 0.486916 | 1.1:-60849584 | MS.gene52620:CDS |
| AAACAATGGATTACTGTCTC+AGG | 0.487360 | 1.1:-60848978 | MS.gene52620:CDS |
| GAAGGAAAGGGAAATGATGT+TGG | 0.488608 | 1.1:-60849275 | MS.gene52620:CDS |
| GAATGTTGAGAAGATGAGGT+TGG | 0.491925 | 1.1:-60849611 | MS.gene52620:CDS |
| AGTATGAGGTTTCTGTTCAA+AGG | 0.495201 | 1.1:-60849678 | MS.gene52620:CDS |
| TCTTGGACTTGAGCTGCAGC+AGG | 0.495279 | 1.1:-60849389 | MS.gene52620:CDS |
| GCGTGGGAAGATTCGTGAAA+TGG | 0.496463 | 1.1:-60849323 | MS.gene52620:CDS |
| AAAAGGCTGAGAAAGAAAGA+AGG | 0.498100 | 1.1:-60849567 | MS.gene52620:CDS |
| TGTTCAAAGGGAGAAGATGA+AGG | 0.500438 | 1.1:-60849665 | MS.gene52620:CDS |
| TACTGAATTGAAGCTTAAGC+AGG | 0.508643 | 1.1:-60848702 | MS.gene52620:CDS |
| GAATTTGCAGTCACAAGTTG+TGG | 0.509082 | 1.1:-60848867 | MS.gene52620:CDS |
| GAAGGAGAAGATTGATTTGG+TGG | 0.509164 | 1.1:-60849470 | MS.gene52620:CDS |
| AGTAGCAGCAGAGGTTAAAC+CGG | 0.511423 | 1.1:+60848172 | None:intergenic |
| GAATTTGGAGTTGCAAGTTG+TGG | 0.512655 | 1.1:-60848636 | MS.gene52620:CDS |
| AGGTTGCTGTGGAGAAGGAA+AGG | 0.512829 | 1.1:-60849288 | MS.gene52620:CDS |
| TATTGAGGTTGCTGTGGAGA+AGG | 0.514158 | 1.1:-60849293 | MS.gene52620:CDS |
| TGAAATGGAGGAAACTATTG+AGG | 0.516918 | 1.1:-60849308 | MS.gene52620:CDS |
| CACATAAAGGTAAGAACTTG+TGG | 0.519666 | 1.1:-60848196 | MS.gene52620:CDS |
| TGTACTGAAGGGTGTTGTAG+AGG | 0.520552 | 1.1:-60849035 | MS.gene52620:CDS |
| TGAGCTGCAGCAGGTTAATG+AGG | 0.523686 | 1.1:-60849380 | MS.gene52620:CDS |
| AGCACAAATAGTAGCAGCAG+AGG | 0.529268 | 1.1:+60848163 | None:intergenic |
| TTGAGGAAGTGGAGCTTGAG+AGG | 0.534554 | 1.1:-60848787 | MS.gene52620:CDS |
| TTGAGAGTTTGACTGAGGGG+AGG | 0.535341 | 1.1:-60849207 | MS.gene52620:CDS |
| CAAGAAAGCATTCAAAGCTA+AGG | 0.537974 | 1.1:-60848279 | MS.gene52620:CDS |
| AATGAGACAAACAAGGAGCT+AGG | 0.538433 | 1.1:-60848545 | MS.gene52620:CDS |
| AATGCGGTTTCTGTGATTGG+TGG | 0.539119 | 1.1:+60849858 | None:intergenic |
| AGTATTGAGAGTTTGACTGA+GGG | 0.540460 | 1.1:-60849211 | MS.gene52620:CDS |
| AAACCCTAATTCAGTGATCT+GGG | 0.540876 | 1.1:+60849738 | None:intergenic |
| TGAGAGTTTGACTGAGGGGA+GGG | 0.543135 | 1.1:-60849206 | MS.gene52620:CDS |
| AGAAGATGAGGTTGGATGCA+CGG | 0.544378 | 1.1:-60849603 | MS.gene52620:CDS |
| GGGTCATCATTGGTGGATGG+TGG | 0.544512 | 1.1:+60849934 | None:intergenic |
| CTTTGAGAAGAACGTTGTTG+AGG | 0.544572 | 1.1:+60849884 | None:intergenic |
| AAACAAAGTGGAGGATTTGG+AGG | 0.546631 | 1.1:-60848732 | MS.gene52620:CDS |
| GGTGGATGGTGGTGGTTGTG+GGG | 0.547005 | 1.1:+60849945 | None:intergenic |
| GGTGGTGAAGGAGAAGAAAG+AGG | 0.547289 | 1.1:-60849452 | MS.gene52620:CDS |
| GGTTGGTGAGAAGAAGGAGA+TGG | 0.555356 | 1.1:-60849239 | MS.gene52620:CDS |
| ATTCAAAGCTAAGGATGAGC+TGG | 0.556043 | 1.1:-60848270 | MS.gene52620:CDS |
| AATGAAGAGGCGGTGATGCG+TGG | 0.557344 | 1.1:-60849340 | MS.gene52620:CDS |
| AAAGGCTGAGAAAGAAAGAA+GGG | 0.557380 | 1.1:-60849566 | MS.gene52620:CDS |
| TGAGGAGCTTGAGAAGGACT+GGG | 0.558130 | 1.1:-60849542 | MS.gene52620:CDS |
| AAGGAGAAGAAAGAGGCTGA+GGG | 0.558642 | 1.1:-60849445 | MS.gene52620:CDS |
| CAAAGCTAACCACGCCGCCA+TGG | 0.560141 | 1.1:-60849824 | MS.gene52620:CDS |
| TGAAGGGTGTTGTAGAGGAG+TGG | 0.561592 | 1.1:-60849030 | MS.gene52620:CDS |
| TGAGAGGGATAACGTCAGAA+AGG | 0.563589 | 1.1:-60848771 | MS.gene52620:CDS |
| ATGAAGAGGCGGTGATGCGT+GGG | 0.564133 | 1.1:-60849339 | MS.gene52620:CDS |
| AACAGATGGGTCATCATTGG+TGG | 0.564931 | 1.1:+60849927 | None:intergenic |
| AAGTATTGAGAGTTTGACTG+AGG | 0.565456 | 1.1:-60849212 | MS.gene52620:CDS |
| TGAGAATGCTGAAGCTGAGT+TGG | 0.565780 | 1.1:-60848597 | MS.gene52620:CDS |
| GAAGGTGATTGATGAGTTGA+AGG | 0.567020 | 1.1:-60849488 | MS.gene52620:CDS |
| TGTGTCTGGAGAGTGAGAAG+AGG | 0.568416 | 1.1:-60849633 | MS.gene52620:CDS |
| TGCAGCTCAAAGAGAGTGCA+AGG | 0.569535 | 1.1:-60848468 | MS.gene52620:CDS |
| ATGTTATAAGAATGCTGTTG+AGG | 0.573650 | 1.1:-60848804 | MS.gene52620:CDS |
| GAGAGGGATAACGTCAGAAA+GGG | 0.575443 | 1.1:-60848770 | MS.gene52620:CDS |
| AAGGGTTGAGGAGCTTGAGA+AGG | 0.580524 | 1.1:-60849548 | MS.gene52620:CDS |
| TTGGAAAATAGTAAATTGGT+TGG | 0.582640 | 1.1:-60849256 | MS.gene52620:CDS |
| GAAGAGCTCGCGGAATGAAG+AGG | 0.582918 | 1.1:-60849353 | MS.gene52620:CDS |
| TGAGAAAGAAAGAAGGGTTG+AGG | 0.586230 | 1.1:-60849560 | MS.gene52620:CDS |
| GGTTGCTGTGGAGAAGGAAA+GGG | 0.589431 | 1.1:-60849287 | MS.gene52620:CDS |
| AAAGGTAAGAACTTGTGGAC+CGG | 0.591726 | 1.1:-60848191 | MS.gene52620:CDS |
| AATGAAGTCGTTAAGTTGCA+AGG | 0.591972 | 1.1:-60849067 | MS.gene52620:CDS |
| GTATTGAGAGTTTGACTGAG+GGG | 0.596823 | 1.1:-60849210 | MS.gene52620:CDS |
| GTCACAAGTTGTGGAAATGG+AGG | 0.603940 | 1.1:-60848858 | MS.gene52620:CDS |
| TAGGCAGCGTGAGGTTGATG+AGG | 0.607173 | 1.1:-60849137 | MS.gene52620:CDS |
| TTCTCTCTTAACCATATCCA+GGG | 0.608281 | 1.1:+60849168 | None:intergenic |
| TGAGGGTGTAAATAGTACTC+AGG | 0.610860 | 1.1:-60849428 | MS.gene52620:CDS |
| CAAAGCTAAGGATGAGCTGG+TGG | 0.611150 | 1.1:-60848267 | MS.gene52620:CDS |
| CTTCAACATCCATGGCGGCG+TGG | 0.620836 | 1.1:+60849815 | None:intergenic |
| TGAGGAAGTGGAGCTTGAGA+GGG | 0.621802 | 1.1:-60848786 | MS.gene52620:CDS |
| TTGACTGCATATGTTGCTAA+AGG | 0.622390 | 1.1:-60848134 | MS.gene52620:CDS |
| AGGTGAAATAAGTGTACTGA+AGG | 0.625603 | 1.1:-60849047 | MS.gene52620:CDS |
| GGATACTGTTTATAGGACCC+TGG | 0.628797 | 1.1:-60849185 | MS.gene52620:CDS |
| GTTGCAAGTTGTGGGACTGA+AGG | 0.629045 | 1.1:-60848627 | MS.gene52620:CDS |
| GATGGGTCATCATTGGTGGA+TGG | 0.631583 | 1.1:+60849931 | None:intergenic |
| CAACAGTAAGAAGTTTGATG+AGG | 0.631997 | 1.1:-60848906 | MS.gene52620:CDS |
| TGACGAGGCAACAAATAAGG+TGG | 0.639359 | 1.1:-60848660 | MS.gene52620:CDS |
| ACTCTCTTTGAGCTGCAATG+AGG | 0.642172 | 1.1:+60848474 | None:intergenic |
| CTTTGAGAAGAAGCTGAATG+CGG | 0.642555 | 1.1:+60849842 | None:intergenic |
| TGGGAAGATTCGTGAAATGG+AGG | 0.643009 | 1.1:-60849320 | MS.gene52620:CDS |
| GGAAACTATTGAGGTTGCTG+TGG | 0.643834 | 1.1:-60849299 | MS.gene52620:CDS |
| TGCTGAAGCTGAGTTGGTCA+AGG | 0.646705 | 1.1:-60848591 | MS.gene52620:CDS |
| GGCGAGAAGAGCTAGAGATG+AGG | 0.648893 | 1.1:-60849116 | MS.gene52620:CDS |
| CGTTAATCAAAACATCTATG+CGG | 0.652889 | 1.1:+60848519 | None:intergenic |
| CATCATGAAAAGATATGACG+AGG | 0.665707 | 1.1:-60848675 | MS.gene52620:CDS |
| GGGTGTAAATAGTACTCAGG+AGG | 0.667048 | 1.1:-60849425 | MS.gene52620:CDS |
| ACATGCTTCTTCTCACCGCG+AGG | 0.668840 | 1.1:+60848341 | None:intergenic |
| GAGCTCGCGGAATGAAGAGG+CGG | 0.670628 | 1.1:-60849350 | MS.gene52620:CDS |
| TCGCGGTGAGAAGAAGCATG+TGG | 0.678181 | 1.1:-60848339 | MS.gene52620:CDS |
| TTTCTCTTCAACATCCATGG+CGG | 0.680764 | 1.1:+60849810 | None:intergenic |
| GAAGATGAATGAGACAAACA+AGG | 0.682202 | 1.1:-60848552 | MS.gene52620:CDS |
| ATTGGAGAATAGGCAGCGTG+AGG | 0.687102 | 1.1:-60849146 | MS.gene52620:CDS |
| GGTGAAATAAGTGTACTGAA+GGG | 0.705436 | 1.1:-60849046 | MS.gene52620:CDS |
| ACATGTGTCTAAGGAAAGTG+TGG | 0.709564 | 1.1:-60848372 | MS.gene52620:CDS |
| AGTGTGGAAGTGATTCCTCG+CGG | 0.788854 | 1.1:-60848356 | MS.gene52620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATCAATTCAAAGCAAACTT+TGG | - | chr1.1:60849713-60849732 | MS.gene52620:CDS | 25.0% |
| ! | GATGTTGGAAAATAGTAAAT+TGG | - | chr1.1:60848870-60848889 | MS.gene52620:CDS | 25.0% |
| ! | TGATGAAAAGAAAAACAAAG+TGG | - | chr1.1:60849386-60849405 | MS.gene52620:CDS | 25.0% |
| ! | TTGGAAAATAGTAAATTGGT+TGG | - | chr1.1:60848874-60848893 | MS.gene52620:CDS | 25.0% |
| !!! | AGATGTTTTGATTAACGAAA+AGG | - | chr1.1:60849617-60849636 | MS.gene52620:CDS | 25.0% |
| AACAAATAAGGTGGAGAATT+TGG | - | chr1.1:60849479-60849498 | MS.gene52620:CDS | 30.0% | |
| ATGTTATAAGAATGCTGTTG+AGG | - | chr1.1:60849326-60849345 | MS.gene52620:CDS | 30.0% | |
| CGTTAATCAAAACATCTATG+CGG | + | chr1.1:60849614-60849633 | None:intergenic | 30.0% | |
| GAAAAATGAGATTGAGTATG+AGG | - | chr1.1:60848438-60848457 | MS.gene52620:CDS | 30.0% | |
| TGAAAAGAAAAACAAAGTGG+AGG | - | chr1.1:60849389-60849408 | MS.gene52620:CDS | 30.0% | |
| TGTCTCAGGTTAATCATTAT+AGG | - | chr1.1:60849166-60849185 | MS.gene52620:CDS | 30.0% | |
| TTAAGAGAGAATTGGAGAAT+AGG | - | chr1.1:60848974-60848993 | MS.gene52620:CDS | 30.0% | |
| ! | AGATTTTGAATCTGAACAGA+TGG | + | chr1.1:60848220-60848239 | None:intergenic | 30.0% |
| ! | ATTTTTCTCTTCAACATCCA+TGG | + | chr1.1:60848326-60848345 | None:intergenic | 30.0% |
| ! | CAAAGAAAACATCGTTTTGA+AGG | + | chr1.1:60848360-60848379 | None:intergenic | 30.0% |
| ! | GATTTTGAATCTGAACAGAT+GGG | + | chr1.1:60848219-60848238 | None:intergenic | 30.0% |
| ! | GGTATTTGTTCCTTTCTTTT+TGG | + | chr1.1:60848134-60848153 | None:intergenic | 30.0% |
| ! | TGTGAAGAAGTCAATTTTGT+CGG | - | chr1.1:60848618-60848637 | MS.gene52620:CDS | 30.0% |
| AAAAGGCTGAGAAAGAAAGA+AGG | - | chr1.1:60848563-60848582 | MS.gene52620:CDS | 35.0% | |
| AAAATTGTAGCTAGAGAGTC+TGG | - | chr1.1:60849123-60849142 | MS.gene52620:CDS | 35.0% | |
| AAACCCTAATTCAGTGATCT+GGG | + | chr1.1:60848395-60848414 | None:intergenic | 35.0% | |
| AAAGGCTGAGAAAGAAAGAA+GGG | - | chr1.1:60848564-60848583 | MS.gene52620:CDS | 35.0% | |
| ACGGAAACTGTTTGATGAAA+AGG | - | chr1.1:60848546-60848565 | MS.gene52620:CDS | 35.0% | |
| AGGTGAAATAAGTGTACTGA+AGG | - | chr1.1:60849083-60849102 | MS.gene52620:CDS | 35.0% | |
| AGTATGAGGTTTCTGTTCAA+AGG | - | chr1.1:60848452-60848471 | MS.gene52620:CDS | 35.0% | |
| ATATGACGAGGCAACAAATA+AGG | - | chr1.1:60849467-60849486 | MS.gene52620:CDS | 35.0% | |
| ATTCTCTCTTAACCATATCC+AGG | + | chr1.1:60848966-60848985 | None:intergenic | 35.0% | |
| CAACAGTAAGAAGTTTGATG+AGG | - | chr1.1:60849224-60849243 | MS.gene52620:CDS | 35.0% | |
| CACATAAAGGTAAGAACTTG+TGG | - | chr1.1:60849934-60849953 | MS.gene52620:CDS | 35.0% | |
| CATCATGAAAAGATATGACG+AGG | - | chr1.1:60849455-60849474 | MS.gene52620:CDS | 35.0% | |
| GAAAAACAAAGTGGAGGATT+TGG | - | chr1.1:60849395-60849414 | MS.gene52620:CDS | 35.0% | |
| GAAGATGAATGAGACAAACA+AGG | - | chr1.1:60849578-60849597 | MS.gene52620:CDS | 35.0% | |
| GGATATGGTTAAGAGAGAAT+TGG | - | chr1.1:60848966-60848985 | MS.gene52620:CDS | 35.0% | |
| GGTGAAATAAGTGTACTGAA+GGG | - | chr1.1:60849084-60849103 | MS.gene52620:CDS | 35.0% | |
| GTATGAGGTTTCTGTTCAAA+GGG | - | chr1.1:60848453-60848472 | MS.gene52620:CDS | 35.0% | |
| GTTGAAGGAGAAGATTGATT+TGG | - | chr1.1:60848657-60848676 | MS.gene52620:CDS | 35.0% | |
| TACTGAATTGAAGCTTAAGC+AGG | - | chr1.1:60849428-60849447 | MS.gene52620:CDS | 35.0% | |
| TGAAATGGAGGAAACTATTG+AGG | - | chr1.1:60848822-60848841 | MS.gene52620:CDS | 35.0% | |
| TGATGAGGAGAAAAAGAAAG+TGG | - | chr1.1:60849239-60849258 | MS.gene52620:CDS | 35.0% | |
| TTCTCTCTTAACCATATCCA+GGG | + | chr1.1:60848965-60848984 | None:intergenic | 35.0% | |
| TTGACTGCATATGTTGCTAA+AGG | - | chr1.1:60849996-60850015 | MS.gene52620:CDS | 35.0% | |
| ! | AATGAAGTCGTTAAGTTGCA+AGG | - | chr1.1:60849063-60849082 | MS.gene52620:CDS | 35.0% |
| ! | AATTTGGAGTTGCAAGTTGT+GGG | - | chr1.1:60849495-60849514 | MS.gene52620:CDS | 35.0% |
| ! | AGTATTGAGAGTTTGACTGA+GGG | - | chr1.1:60848919-60848938 | MS.gene52620:CDS | 35.0% |
| ! | CTCGTCATATCTTTTCATGA+TGG | + | chr1.1:60849457-60849476 | None:intergenic | 35.0% |
| ! | GAGGTGAAGATTTTCAATCT+TGG | - | chr1.1:60848724-60848743 | MS.gene52620:CDS | 35.0% |
| !! | AAACAATGGATTACTGTCTC+AGG | - | chr1.1:60849152-60849171 | MS.gene52620:CDS | 35.0% |
| !! | AAGTATTGAGAGTTTGACTG+AGG | - | chr1.1:60848918-60848937 | MS.gene52620:CDS | 35.0% |
| !! | CAAGAAAGCATTCAAAGCTA+AGG | - | chr1.1:60849851-60849870 | MS.gene52620:CDS | 35.0% |
| !! | TAAATTGGTTGGTGAGAAGA+AGG | - | chr1.1:60848885-60848904 | MS.gene52620:CDS | 35.0% |
| AAACAAAGTGGAGGATTTGG+AGG | - | chr1.1:60849398-60849417 | MS.gene52620:CDS | 40.0% | |
| AAAGGTAAGAACTTGTGGAC+CGG | - | chr1.1:60849939-60849958 | MS.gene52620:CDS | 40.0% | |
| AAGACCCAGATCACTGAATT+AGG | - | chr1.1:60848388-60848407 | MS.gene52620:CDS | 40.0% | |
| AATGAGACAAACAAGGAGCT+AGG | - | chr1.1:60849585-60849604 | MS.gene52620:CDS | 40.0% | |
| ACATGTGTCTAAGGAAAGTG+TGG | - | chr1.1:60849758-60849777 | MS.gene52620:CDS | 40.0% | |
| AGACCCAGATCACTGAATTA+GGG | - | chr1.1:60848389-60848408 | MS.gene52620:CDS | 40.0% | |
| AGAGGAATGTTGAGAAGATG+AGG | - | chr1.1:60848515-60848534 | MS.gene52620:CDS | 40.0% | |
| AGGGAGAAGATGAAGGATTT+AGG | - | chr1.1:60848472-60848491 | MS.gene52620:CDS | 40.0% | |
| ATTCAAAGCTAAGGATGAGC+TGG | - | chr1.1:60849860-60849879 | MS.gene52620:CDS | 40.0% | |
| GAAACCCTAATTCAGTGATC+TGG | + | chr1.1:60848396-60848415 | None:intergenic | 40.0% | |
| GAAGGAAAGGGAAATGATGT+TGG | - | chr1.1:60848855-60848874 | MS.gene52620:CDS | 40.0% | |
| GAATGTTGAGAAGATGAGGT+TGG | - | chr1.1:60848519-60848538 | MS.gene52620:CDS | 40.0% | |
| GAATTTGCAGTCACAAGTTG+TGG | - | chr1.1:60849263-60849282 | MS.gene52620:CDS | 40.0% | |
| GAGGTTGAGAAGGTTAAAGT+TGG | - | chr1.1:60849033-60849052 | MS.gene52620:CDS | 40.0% | |
| GAGTCTGGAGAGAAAAACAA+TGG | - | chr1.1:60849138-60849157 | MS.gene52620:CDS | 40.0% | |
| GGGAGAAGATGAAGGATTTA+GGG | - | chr1.1:60848473-60848492 | MS.gene52620:CDS | 40.0% | |
| GTATTGAGAGTTTGACTGAG+GGG | - | chr1.1:60848920-60848939 | MS.gene52620:CDS | 40.0% | |
| TAAGAATGCTGTTGAGGAAG+TGG | - | chr1.1:60849332-60849351 | MS.gene52620:CDS | 40.0% | |
| TGAAGAGAAAAATCTCGCCT+TGG | - | chr1.1:60848333-60848352 | MS.gene52620:CDS | 40.0% | |
| TGAGAAAGAAAGAAGGGTTG+AGG | - | chr1.1:60848570-60848589 | MS.gene52620:CDS | 40.0% | |
| TGTTCAAAGGGAGAAGATGA+AGG | - | chr1.1:60848465-60848484 | MS.gene52620:CDS | 40.0% | |
| TGTTTATAGGACCCTGGATA+TGG | - | chr1.1:60848951-60848970 | MS.gene52620:CDS | 40.0% | |
| TTTCTCTTCAACATCCATGG+CGG | + | chr1.1:60848323-60848342 | None:intergenic | 40.0% | |
| ! | CTTTGAGAAGAACGTTGTTG+AGG | + | chr1.1:60848249-60848268 | None:intergenic | 40.0% |
| ! | CTTTGAGAAGAAGCTGAATG+CGG | + | chr1.1:60848291-60848310 | None:intergenic | 40.0% |
| ! | GAAGGTGATTGATGAGTTGA+AGG | - | chr1.1:60848642-60848661 | MS.gene52620:CDS | 40.0% |
| ! | GAAGTCAATTTTGTCGGTGA+AGG | - | chr1.1:60848624-60848643 | MS.gene52620:CDS | 40.0% |
| ! | GAATTTGGAGTTGCAAGTTG+TGG | - | chr1.1:60849494-60849513 | MS.gene52620:CDS | 40.0% |
| ! | GTCTTTTGCTGAAGAACTTG+AGG | - | chr1.1:60849824-60849843 | MS.gene52620:CDS | 40.0% |
| ! | TGAGGGTGTAAATAGTACTC+AGG | - | chr1.1:60848702-60848721 | MS.gene52620:CDS | 40.0% |
| !! | GAAGATTGATTTGGTGGTGA+AGG | - | chr1.1:60848666-60848685 | MS.gene52620:CDS | 40.0% |
| !! | GAAGGAGAAGATTGATTTGG+TGG | - | chr1.1:60848660-60848679 | MS.gene52620:CDS | 40.0% |
| !! | GGTTAAGGTTTTGTGGTCTA+GGG | + | chr1.1:60848167-60848186 | None:intergenic | 40.0% |
| !!! | AACATCGTTTTGAAGGTCCA+AGG | + | chr1.1:60848353-60848372 | None:intergenic | 40.0% |
| AACAGATGGGTCATCATTGG+TGG | + | chr1.1:60848206-60848225 | None:intergenic | 45.0% | |
| AAGGAGAAGAAAGAGGCTGA+GGG | - | chr1.1:60848685-60848704 | MS.gene52620:CDS | 45.0% | |
| AATGCGGTTTCTGTGATTGG+TGG | + | chr1.1:60848275-60848294 | None:intergenic | 45.0% | |
| ACTCTCTTTGAGCTGCAATG+AGG | + | chr1.1:60849659-60849678 | None:intergenic | 45.0% | |
| AGAAGATGAGGTTGGATGCA+CGG | - | chr1.1:60848527-60848546 | MS.gene52620:CDS | 45.0% | |
| AGCACAAATAGTAGCAGCAG+AGG | + | chr1.1:60849970-60849989 | None:intergenic | 45.0% | |
| AGCTAGAGATGAGGTTGAGA+AGG | - | chr1.1:60849023-60849042 | MS.gene52620:CDS | 45.0% | |
| AGGGGAGGGATACTGTTTAT+AGG | - | chr1.1:60848938-60848957 | MS.gene52620:CDS | 45.0% | |
| AGTAGCAGCAGAGGTTAAAC+CGG | + | chr1.1:60849961-60849980 | None:intergenic | 45.0% | |
| CACTGTTGCACATGTGTCTA+AGG | - | chr1.1:60849749-60849768 | MS.gene52620:CDS | 45.0% | |
| CTGAACAGATGGGTCATCAT+TGG | + | chr1.1:60848209-60848228 | None:intergenic | 45.0% | |
| CTGAATGCGGTTTCTGTGAT+TGG | + | chr1.1:60848278-60848297 | None:intergenic | 45.0% | |
| GAGAGGGATAACGTCAGAAA+GGG | - | chr1.1:60849360-60849379 | MS.gene52620:CDS | 45.0% | |
| GCAGTCACAAGTTGTGGAAA+TGG | - | chr1.1:60849269-60849288 | MS.gene52620:CDS | 45.0% | |
| GGAAACTATTGAGGTTGCTG+TGG | - | chr1.1:60848831-60848850 | MS.gene52620:CDS | 45.0% | |
| GGATACTGTTTATAGGACCC+TGG | - | chr1.1:60848945-60848964 | MS.gene52620:CDS | 45.0% | |
| GGGTGTAAATAGTACTCAGG+AGG | - | chr1.1:60848705-60848724 | MS.gene52620:CDS | 45.0% | |
| GTCACAAGTTGTGGAAATGG+AGG | - | chr1.1:60849272-60849291 | MS.gene52620:CDS | 45.0% | |
| TATTGAGGTTGCTGTGGAGA+AGG | - | chr1.1:60848837-60848856 | MS.gene52620:CDS | 45.0% | |
| TCTGCGTCTGATGCACATAA+AGG | - | chr1.1:60849921-60849940 | MS.gene52620:CDS | 45.0% | |
| TGACGAGGCAACAAATAAGG+TGG | - | chr1.1:60849470-60849489 | MS.gene52620:CDS | 45.0% | |
| TGAGAATGCTGAAGCTGAGT+TGG | - | chr1.1:60849533-60849552 | MS.gene52620:CDS | 45.0% | |
| TGAGAGGGATAACGTCAGAA+AGG | - | chr1.1:60849359-60849378 | MS.gene52620:CDS | 45.0% | |
| TGGGAAGATTCGTGAAATGG+AGG | - | chr1.1:60848810-60848829 | MS.gene52620:CDS | 45.0% | |
| ! | GAAGGATTTAGGGTTGTGTC+TGG | - | chr1.1:60848483-60848502 | MS.gene52620:CDS | 45.0% |
| ! | GTGGTCTAGGGTTTGAGATT+GGG | + | chr1.1:60848155-60848174 | None:intergenic | 45.0% |
| ! | GTTGTGGGGTTAAGGTTTTG+TGG | + | chr1.1:60848174-60848193 | None:intergenic | 45.0% |
| ! | TGTGGTCTAGGGTTTGAGAT+TGG | + | chr1.1:60848156-60848175 | None:intergenic | 45.0% |
| !! | GGGTTAAGGTTTTGTGGTCT+AGG | + | chr1.1:60848168-60848187 | None:intergenic | 45.0% |
| !! | TGTACTGAAGGGTGTTGTAG+AGG | - | chr1.1:60849095-60849114 | MS.gene52620:CDS | 45.0% |
| !!! | ATGAGGTTTTGAAGAGCTCG+CGG | - | chr1.1:60848767-60848786 | MS.gene52620:CDS | 45.0% |
| AAGGGTTGAGGAGCTTGAGA+AGG | - | chr1.1:60848582-60848601 | MS.gene52620:CDS | 50.0% | |
| AGGTTGCTGTGGAGAAGGAA+AGG | - | chr1.1:60848842-60848861 | MS.gene52620:CDS | 50.0% | |
| AGTGTGGAAGTGATTCCTCG+CGG | - | chr1.1:60849774-60849793 | MS.gene52620:CDS | 50.0% | |
| ATTGGAGAATAGGCAGCGTG+AGG | - | chr1.1:60848984-60849003 | MS.gene52620:CDS | 50.0% | |
| CAAAGCTAAGGATGAGCTGG+TGG | - | chr1.1:60849863-60849882 | MS.gene52620:CDS | 50.0% | |
| GAAGGAGAAGAAAGAGGCTG+AGG | - | chr1.1:60848684-60848703 | MS.gene52620:CDS | 50.0% | |
| GATGGGTCATCATTGGTGGA+TGG | + | chr1.1:60848202-60848221 | None:intergenic | 50.0% | |
| GCGTGGGAAGATTCGTGAAA+TGG | - | chr1.1:60848807-60848826 | MS.gene52620:CDS | 50.0% | |
| GCTTGAGAAGGACTGGGATT+TGG | - | chr1.1:60848594-60848613 | MS.gene52620:CDS | 50.0% | |
| GGTGGTGAAGGAGAAGAAAG+AGG | - | chr1.1:60848678-60848697 | MS.gene52620:CDS | 50.0% | |
| GGTTGCTGTGGAGAAGGAAA+GGG | - | chr1.1:60848843-60848862 | MS.gene52620:CDS | 50.0% | |
| GTTGCAAGTTGTGGGACTGA+AGG | - | chr1.1:60849503-60849522 | MS.gene52620:CDS | 50.0% | |
| TGAGAGTTTGACTGAGGGGA+GGG | - | chr1.1:60848924-60848943 | MS.gene52620:CDS | 50.0% | |
| TGAGCTGCAGCAGGTTAATG+AGG | - | chr1.1:60848750-60848769 | MS.gene52620:CDS | 50.0% | |
| TGAGGAAGTGGAGCTTGAGA+GGG | - | chr1.1:60849344-60849363 | MS.gene52620:CDS | 50.0% | |
| TGAGGAGCTTGAGAAGGACT+GGG | - | chr1.1:60848588-60848607 | MS.gene52620:CDS | 50.0% | |
| TGTGTCTGGAGAGTGAGAAG+AGG | - | chr1.1:60848497-60848516 | MS.gene52620:CDS | 50.0% | |
| TTGAGAGTTTGACTGAGGGG+AGG | - | chr1.1:60848923-60848942 | MS.gene52620:CDS | 50.0% | |
| TTGAGGAAGTGGAGCTTGAG+AGG | - | chr1.1:60849343-60849362 | MS.gene52620:CDS | 50.0% | |
| TTGAGGAGCTTGAGAAGGAC+TGG | - | chr1.1:60848587-60848606 | MS.gene52620:CDS | 50.0% | |
| ! | TCATCATTGGTGGATGGTGG+TGG | + | chr1.1:60848196-60848215 | None:intergenic | 50.0% |
| ! | TGCAGCTCAAAGAGAGTGCA+AGG | - | chr1.1:60849662-60849681 | MS.gene52620:CDS | 50.0% |
| !! | GGTTGGTGAGAAGAAGGAGA+TGG | - | chr1.1:60848891-60848910 | MS.gene52620:CDS | 50.0% |
| !! | TGAAGGGTGTTGTAGAGGAG+TGG | - | chr1.1:60849100-60849119 | MS.gene52620:CDS | 50.0% |
| !! | TGCTGAAGCTGAGTTGGTCA+AGG | - | chr1.1:60849539-60849558 | MS.gene52620:CDS | 50.0% |
| AATGAAGAGGCGGTGATGCG+TGG | - | chr1.1:60848790-60848809 | MS.gene52620:CDS | 55.0% | |
| ACATGCTTCTTCTCACCGCG+AGG | + | chr1.1:60849792-60849811 | None:intergenic | 55.0% | |
| ATGAAGAGGCGGTGATGCGT+GGG | - | chr1.1:60848791-60848810 | MS.gene52620:CDS | 55.0% | |
| GAAGAGCTCGCGGAATGAAG+AGG | - | chr1.1:60848777-60848796 | MS.gene52620:CDS | 55.0% | |
| GGCGAGAAGAGCTAGAGATG+AGG | - | chr1.1:60849014-60849033 | MS.gene52620:CDS | 55.0% | |
| TCTTGGACTTGAGCTGCAGC+AGG | - | chr1.1:60848741-60848760 | MS.gene52620:CDS | 55.0% | |
| ! | GGGTCATCATTGGTGGATGG+TGG | + | chr1.1:60848199-60848218 | None:intergenic | 55.0% |
| ! | TCGCGGTGAGAAGAAGCATG+TGG | - | chr1.1:60849791-60849810 | MS.gene52620:CDS | 55.0% |
| !! | TAGGCAGCGTGAGGTTGATG+AGG | - | chr1.1:60848993-60849012 | MS.gene52620:CDS | 55.0% |
| !! | TGGTGGATGGTGGTGGTTGT+GGG | + | chr1.1:60848189-60848208 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTTGTGGGGTTA+AGG | + | chr1.1:60848182-60848201 | None:intergenic | 55.0% |
| !! | TTGGTGGATGGTGGTGGTTG+TGG | + | chr1.1:60848190-60848209 | None:intergenic | 55.0% |
| CAAAGCTAACCACGCCGCCA+TGG | - | chr1.1:60848306-60848325 | MS.gene52620:CDS | 60.0% | |
| CTTCAACATCCATGGCGGCG+TGG | + | chr1.1:60848318-60848337 | None:intergenic | 60.0% | |
| GAGCTCGCGGAATGAAGAGG+CGG | - | chr1.1:60848780-60848799 | MS.gene52620:CDS | 60.0% | |
| !! | GGTGGATGGTGGTGGTTGTG+GGG | + | chr1.1:60848188-60848207 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 60848127 | 60850025 | 60848127 | ID=MS.gene52620 |
| chr1.1 | mRNA | 60848127 | 60850025 | 60848127 | ID=MS.gene52620.t1;Parent=MS.gene52620 |
| chr1.1 | exon | 60848127 | 60850025 | 60848127 | ID=MS.gene52620.t1.exon1;Parent=MS.gene52620.t1 |
| chr1.1 | CDS | 60848127 | 60850025 | 60848127 | ID=cds.MS.gene52620.t1;Parent=MS.gene52620.t1 |
| Gene Sequence |
| Protein sequence |
