Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44056.t1 | XP_013469029.1 | 88.6 | 632 | 72 | 0 | 1 | 632 | 1 | 632 | 1.90E-194 | 689.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44056.t1 | A0A072VN55 | 88.6 | 632 | 72 | 0 | 1 | 632 | 1 | 632 | 1.4e-194 | 689.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049236 | MS.gene44056 | -0.83244 | 9.44E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene44056 | 0.850312 | 1.84E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene44056 | 0.825676 | 4.12E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene44056 | 0.811336 | 7.37E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene44056 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene049491 | MS.gene44056 | 0.844088 | 9.39E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene44056 | 0.863801 | 1.92E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene44056 | 0.859761 | 3.31E-63 | -1.69E-46 |
| MS.gene049758 | MS.gene44056 | 0.845774 | 3.29E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene44056 | 0.809688 | 1.67E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene44056 | 0.820291 | 7.41E-53 | -1.69E-46 |
| MS.gene050215 | MS.gene44056 | 0.823625 | 1.25E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene44056 | 0.860743 | 1.67E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene44056 | 0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene44056 | 0.82417 | 9.33E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene44056 | 0.808074 | 3.70E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene44056 | 0.831953 | 1.25E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene44056 | 0.822685 | 2.08E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene44056 | 0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene44056 | 0.81205 | 5.15E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene44056 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene44056 | 0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene44056 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene44056 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene44056 | 0.811365 | 7.26E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene44056 | 0.827199 | 1.79E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene44056 | 0.853431 | 2.40E-61 | -1.69E-46 |
| MS.gene051877 | MS.gene44056 | 0.854841 | 9.41E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene44056 | 0.836328 | 9.98E-57 | -1.69E-46 |
| MS.gene052178 | MS.gene44056 | 0.818012 | 2.45E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene44056 | 0.855602 | 5.65E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene44056 | 0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene44056 | 0.839733 | 1.33E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene44056 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene44056 | 0.846569 | 2.00E-59 | -1.69E-46 |
| MS.gene052322 | MS.gene44056 | 0.817345 | 3.46E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene44056 | 0.841385 | 4.91E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene44056 | 0.812356 | 4.42E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene44056 | 0.814534 | 1.47E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene44056 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene44056 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene44056 | 0.84721 | 1.34E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene44056 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene44056 | 0.816524 | 5.29E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene44056 | 0.815015 | 1.15E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene44056 | 0.823109 | 1.65E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene44056 | 0.8368 | 7.57E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene44056 | 0.849858 | 2.47E-60 | -1.69E-46 |
| MS.gene054010 | MS.gene44056 | 0.819365 | 1.21E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene44056 | 0.836538 | 8.83E-57 | -1.69E-46 |
| MS.gene054012 | MS.gene44056 | 0.829349 | 5.41E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene44056 | 0.822102 | 2.83E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene44056 | 0.825612 | 4.26E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene44056 | 0.807909 | 4.01E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene44056 | 0.802284 | 6.03E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene44056 | 0.806324 | 8.69E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene44056 | 0.804297 | 2.31E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene44056 | 0.804946 | 1.69E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene44056 | 0.83056 | 2.74E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene44056 | 0.814057 | 1.87E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene44056 | 0.829981 | 3.80E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene44056 | 0.87966 | 1.04E-69 | -1.69E-46 |
| MS.gene055390 | MS.gene44056 | 0.844264 | 8.42E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene44056 | 0.861956 | 7.12E-64 | -1.69E-46 |
| MS.gene055428 | MS.gene44056 | 0.839698 | 1.36E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene44056 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene44056 | 0.802034 | 6.79E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene44056 | 0.844663 | 6.57E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene44056 | 0.81088 | 9.25E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene44056 | 0.866073 | 3.72E-65 | -1.69E-46 |
| MS.gene056422 | MS.gene44056 | 0.816598 | 5.09E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene44056 | 0.850786 | 1.36E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene44056 | 0.805933 | 1.05E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene44056 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene44056 | 0.856972 | 2.24E-62 | -1.69E-46 |
| MS.gene056933 | MS.gene44056 | 0.852875 | 3.46E-61 | -1.69E-46 |
| MS.gene056935 | MS.gene44056 | 0.849153 | 3.88E-60 | -1.69E-46 |
| MS.gene056942 | MS.gene44056 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene44056 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene057123 | MS.gene44056 | 0.85043 | 1.71E-60 | -1.69E-46 |
| MS.gene057146 | MS.gene44056 | 0.862596 | 4.53E-64 | -1.69E-46 |
| MS.gene05733 | MS.gene44056 | 0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene057448 | MS.gene44056 | 0.835804 | 1.36E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene44056 | 0.839416 | 1.61E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene44056 | 0.837039 | 6.57E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene44056 | 0.805125 | 1.55E-49 | -1.69E-46 |
| MS.gene057478 | MS.gene44056 | -0.832616 | 8.54E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene44056 | 0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene057779 | MS.gene44056 | 0.841248 | 5.33E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene44056 | 0.814538 | 1.46E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene44056 | 0.838818 | 2.29E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene44056 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene44056 | 0.864708 | 1.00E-64 | -1.69E-46 |
| MS.gene058293 | MS.gene44056 | 0.823181 | 1.59E-53 | -1.69E-46 |
| MS.gene05842 | MS.gene44056 | 0.815393 | 9.46E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene44056 | 0.894942 | 1.53E-75 | -1.69E-46 |
| MS.gene058928 | MS.gene44056 | 0.851255 | 1.00E-60 | -1.69E-46 |
| MS.gene058995 | MS.gene44056 | 0.81051 | 1.11E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene44056 | 0.872784 | 2.44E-67 | -1.69E-46 |
| MS.gene059294 | MS.gene44056 | 0.849254 | 3.64E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene44056 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene44056 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene44056 | 0.85563 | 5.55E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene44056 | 0.864404 | 1.25E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene44056 | 0.851136 | 1.08E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene44056 | 0.870723 | 1.18E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene44056 | 0.857442 | 1.63E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene44056 | 0.850833 | 1.32E-60 | -1.69E-46 |
| MS.gene059708 | MS.gene44056 | 0.804396 | 2.20E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene44056 | 0.85686 | 2.42E-62 | -1.69E-46 |
| MS.gene059807 | MS.gene44056 | 0.831689 | 1.45E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene44056 | 0.86775 | 1.09E-65 | -1.69E-46 |
| MS.gene059960 | MS.gene44056 | 0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene059974 | MS.gene44056 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene44056 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene44056 | 0.828395 | 9.21E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene44056 | 0.83105 | 2.08E-55 | -1.69E-46 |
| MS.gene060559 | MS.gene44056 | 0.854431 | 1.24E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene44056 | 0.854007 | 1.64E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene44056 | 0.852983 | 3.23E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene44056 | 0.849592 | 2.93E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene44056 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene44056 | 0.834125 | 3.59E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene44056 | -0.831839 | 1.33E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene44056 | 0.826941 | 2.06E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44056.t1 | MTR_1g082215 | 94.937 | 632 | 32 | 0 | 1 | 632 | 1 | 632 | 0.0 | 1161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44056.t1 | AT5G27330 | 25.354 | 706 | 369 | 16 | 1 | 629 | 1 | 625 | 1.10e-35 | 142 |
| MS.gene44056.t1 | AT3G05130 | 24.714 | 700 | 367 | 18 | 1 | 619 | 1 | 621 | 1.79e-24 | 108 |
Find 133 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACCCAGATCACTGAATT+AGG | 0.168138 | 1.3:-57904145 | MS.gene44056:CDS |
| AGGGAGAAGATGAAGGATTT+AGG | 0.187545 | 1.3:-57904061 | MS.gene44056:CDS |
| AACAAATAAGGTGGAGAATT+TGG | 0.209500 | 1.3:-57903054 | MS.gene44056:CDS |
| GGGAGAAGATGAAGGATTTA+GGG | 0.269179 | 1.3:-57904060 | MS.gene44056:CDS |
| TGGTGGTGGTTGTGGGGTTA+AGG | 0.273734 | 1.3:+57904354 | None:intergenic |
| TGGTGGATGGTGGTGGTTGT+GGG | 0.274390 | 1.3:+57904347 | None:intergenic |
| TGTGGTCTAGGGTTTGAGAT+TGG | 0.283893 | 1.3:+57904380 | None:intergenic |
| TGTCTCAGGTTAATCATTAT+AGG | 0.291389 | 1.3:-57903367 | MS.gene44056:CDS |
| GCTTGAGAAGGACTGGGATT+TGG | 0.303984 | 1.3:-57903939 | MS.gene44056:CDS |
| TGTTTATAGGACCCTGGATA+TGG | 0.304234 | 1.3:-57903582 | MS.gene44056:CDS |
| TTGGTGGATGGTGGTGGTTG+TGG | 0.310014 | 1.3:+57904346 | None:intergenic |
| CACTGTTGCACATGTGTCTA+AGG | 0.328802 | 1.3:-57902784 | MS.gene44056:CDS |
| GTGGTCTAGGGTTTGAGATT+GGG | 0.339700 | 1.3:+57904381 | None:intergenic |
| ATATGACGAGGCAACAAATA+AGG | 0.371426 | 1.3:-57903066 | MS.gene44056:CDS |
| AGACCCAGATCACTGAATTA+GGG | 0.375216 | 1.3:-57904144 | MS.gene44056:CDS |
| GATGTTGGAAAATAGTAAAT+TGG | 0.379157 | 1.3:-57903663 | MS.gene44056:CDS |
| AGGGGAGGGATACTGTTTAT+AGG | 0.389451 | 1.3:-57903595 | MS.gene44056:CDS |
| GTTGAAGGAGAAGATTGATT+TGG | 0.396255 | 1.3:-57903876 | MS.gene44056:CDS |
| CTGAATGCGGTTTCTGTGAT+TGG | 0.397932 | 1.3:+57904258 | None:intergenic |
| AATCAATTCAAAGCAAACTT+TGG | 0.409026 | 1.3:-57902820 | MS.gene44056:CDS |
| AGCTAGAGATGAGGTTGAGA+AGG | 0.410360 | 1.3:-57903510 | MS.gene44056:CDS |
| GAAACCCTAATTCAGTGATC+TGG | 0.411589 | 1.3:+57904140 | None:intergenic |
| GAAGGAGAAGAAAGAGGCTG+AGG | 0.417267 | 1.3:-57903849 | MS.gene44056:CDS |
| TCTGCGTCTGATGCACATAA+AGG | 0.420247 | 1.3:-57902612 | MS.gene44056:CDS |
| GCAGTCACAAGTTGTGGAAA+TGG | 0.421287 | 1.3:-57903264 | MS.gene44056:CDS |
| TTAAGAGAGAATTGGAGAAT+AGG | 0.439435 | 1.3:-57903559 | MS.gene44056:CDS |
| GGATATGGTTAAGAGAGAAT+TGG | 0.440956 | 1.3:-57903567 | MS.gene44056:CDS |
| AAAATTGTAGCTAGAGAGTC+TGG | 0.443169 | 1.3:-57903410 | MS.gene44056:CDS |
| GAAGGATTTAGGGTTGTGTC+TGG | 0.450014 | 1.3:-57904050 | MS.gene44056:CDS |
| GAAGATTGATTTGGTGGTGA+AGG | 0.452814 | 1.3:-57903867 | MS.gene44056:CDS |
| TTGAGGAGCTTGAGAAGGAC+TGG | 0.455210 | 1.3:-57903946 | MS.gene44056:CDS |
| TCATCATTGGTGGATGGTGG+TGG | 0.456751 | 1.3:+57904340 | None:intergenic |
| TAAATTGGTTGGTGAGAAGA+AGG | 0.457718 | 1.3:-57903648 | MS.gene44056:CDS |
| ATTCTCTCTTAACCATATCC+AGG | 0.459211 | 1.3:+57903570 | None:intergenic |
| CTGAACAGATGGGTCATCAT+TGG | 0.459753 | 1.3:+57904327 | None:intergenic |
| TAAGAATGCTGTTGAGGAAG+TGG | 0.466160 | 1.3:-57903201 | MS.gene44056:CDS |
| GAGGTTGAGAAGGTTAAAGT+TGG | 0.473556 | 1.3:-57903500 | MS.gene44056:CDS |
| AGAGGAATGTTGAGAAGATG+AGG | 0.480560 | 1.3:-57904018 | MS.gene44056:CDS |
| GTATGAGGTTTCTGTTCAAA+GGG | 0.485446 | 1.3:-57904080 | MS.gene44056:CDS |
| AATTTGGAGTTGCAAGTTGT+GGG | 0.486287 | 1.3:-57903038 | MS.gene44056:CDS |
| ACGGAAACTGTTTGATGAAA+AGG | 0.486916 | 1.3:-57903987 | MS.gene44056:CDS |
| AAACAATGGATTACTGTCTC+AGG | 0.487360 | 1.3:-57903381 | MS.gene44056:CDS |
| GAAGGAAAGGGAAATGATGT+TGG | 0.488608 | 1.3:-57903678 | MS.gene44056:CDS |
| GAATGTTGAGAAGATGAGGT+TGG | 0.491925 | 1.3:-57904014 | MS.gene44056:CDS |
| AGTATGAGGTTTCTGTTCAA+AGG | 0.495201 | 1.3:-57904081 | MS.gene44056:CDS |
| TCTTGGACTTGAGCTGCAGC+AGG | 0.495279 | 1.3:-57903792 | MS.gene44056:CDS |
| GCGTGGGAAGATTCGTGAAA+TGG | 0.496463 | 1.3:-57903726 | MS.gene44056:CDS |
| AAAAGGCTGAGAAAGAAAGA+AGG | 0.498100 | 1.3:-57903970 | MS.gene44056:CDS |
| TGTTCAAAGGGAGAAGATGA+AGG | 0.500438 | 1.3:-57904068 | MS.gene44056:CDS |
| TACTGAATTGAAGCTTAAGC+AGG | 0.508643 | 1.3:-57903105 | MS.gene44056:CDS |
| GAATTTGCAGTCACAAGTTG+TGG | 0.509082 | 1.3:-57903270 | MS.gene44056:CDS |
| GAAGGAGAAGATTGATTTGG+TGG | 0.509164 | 1.3:-57903873 | MS.gene44056:CDS |
| AGTAGCAGCAGAGGTTAAAC+CGG | 0.511423 | 1.3:+57902575 | None:intergenic |
| GAATTTGGAGTTGCAAGTTG+TGG | 0.512655 | 1.3:-57903039 | MS.gene44056:CDS |
| AGGTTGCTGTGGAGAAGGAA+AGG | 0.512829 | 1.3:-57903691 | MS.gene44056:CDS |
| TATTGAGGTTGCTGTGGAGA+AGG | 0.514158 | 1.3:-57903696 | MS.gene44056:CDS |
| TGAAATGGAGGAAACTATTG+AGG | 0.516918 | 1.3:-57903711 | MS.gene44056:CDS |
| CACATAAAGGTAAGAACTTG+TGG | 0.519666 | 1.3:-57902599 | MS.gene44056:CDS |
| TGTACTGAAGGGTGTTGTAG+AGG | 0.520552 | 1.3:-57903438 | MS.gene44056:CDS |
| TGAGCTGCAGCAGGTTAATG+AGG | 0.523686 | 1.3:-57903783 | MS.gene44056:CDS |
| AGCACAAATAGTAGCAGCAG+AGG | 0.529268 | 1.3:+57902566 | None:intergenic |
| TTGAGGAAGTGGAGCTTGAG+AGG | 0.534554 | 1.3:-57903190 | MS.gene44056:CDS |
| TTGAGAGTTTGACTGAGGGG+AGG | 0.535341 | 1.3:-57903610 | MS.gene44056:CDS |
| CAAGAAAGCATTCAAAGCTA+AGG | 0.537974 | 1.3:-57902682 | MS.gene44056:CDS |
| AATGAGACAAACAAGGAGCT+AGG | 0.538433 | 1.3:-57902948 | MS.gene44056:CDS |
| AATGCGGTTTCTGTGATTGG+TGG | 0.539119 | 1.3:+57904261 | None:intergenic |
| AGTATTGAGAGTTTGACTGA+GGG | 0.540460 | 1.3:-57903614 | MS.gene44056:CDS |
| AAACCCTAATTCAGTGATCT+GGG | 0.540876 | 1.3:+57904141 | None:intergenic |
| TGAGAGTTTGACTGAGGGGA+GGG | 0.543135 | 1.3:-57903609 | MS.gene44056:CDS |
| AGAAGATGAGGTTGGATGCA+CGG | 0.544378 | 1.3:-57904006 | MS.gene44056:CDS |
| GGGTCATCATTGGTGGATGG+TGG | 0.544512 | 1.3:+57904337 | None:intergenic |
| CTTTGAGAAGAACGTTGTTG+AGG | 0.544572 | 1.3:+57904287 | None:intergenic |
| AAACAAAGTGGAGGATTTGG+AGG | 0.546631 | 1.3:-57903135 | MS.gene44056:CDS |
| GGTGGATGGTGGTGGTTGTG+GGG | 0.547005 | 1.3:+57904348 | None:intergenic |
| GGTGGTGAAGGAGAAGAAAG+AGG | 0.547289 | 1.3:-57903855 | MS.gene44056:CDS |
| GGTTGGTGAGAAGAAGGAGA+TGG | 0.555356 | 1.3:-57903642 | MS.gene44056:CDS |
| ATTCAAAGCTAAGGATGAGC+TGG | 0.556043 | 1.3:-57902673 | MS.gene44056:CDS |
| AATGAAGAGGCGGTGATGCG+TGG | 0.557344 | 1.3:-57903743 | MS.gene44056:CDS |
| AAAGGCTGAGAAAGAAAGAA+GGG | 0.557380 | 1.3:-57903969 | MS.gene44056:CDS |
| TGAGGAGCTTGAGAAGGACT+GGG | 0.558130 | 1.3:-57903945 | MS.gene44056:CDS |
| AAGGAGAAGAAAGAGGCTGA+GGG | 0.558642 | 1.3:-57903848 | MS.gene44056:CDS |
| CAAAGCTAACCACGCCGCCA+TGG | 0.560141 | 1.3:-57904227 | MS.gene44056:CDS |
| TGAAGGGTGTTGTAGAGGAG+TGG | 0.561592 | 1.3:-57903433 | MS.gene44056:CDS |
| TGAGAGGGATAACGTCAGAA+AGG | 0.563589 | 1.3:-57903174 | MS.gene44056:CDS |
| ATGAAGAGGCGGTGATGCGT+GGG | 0.564133 | 1.3:-57903742 | MS.gene44056:CDS |
| AACAGATGGGTCATCATTGG+TGG | 0.564931 | 1.3:+57904330 | None:intergenic |
| AAGTATTGAGAGTTTGACTG+AGG | 0.565456 | 1.3:-57903615 | MS.gene44056:CDS |
| TGAGAATGCTGAAGCTGAGT+TGG | 0.565780 | 1.3:-57903000 | MS.gene44056:CDS |
| GAAGGTGATTGATGAGTTGA+AGG | 0.567020 | 1.3:-57903891 | MS.gene44056:CDS |
| TGTGTCTGGAGAGTGAGAAG+AGG | 0.568416 | 1.3:-57904036 | MS.gene44056:CDS |
| TGCAGCTCAAAGAGAGTGCA+AGG | 0.569535 | 1.3:-57902871 | MS.gene44056:CDS |
| ATGTTATAAGAATGCTGTTG+AGG | 0.573650 | 1.3:-57903207 | MS.gene44056:CDS |
| GAGAGGGATAACGTCAGAAA+GGG | 0.575443 | 1.3:-57903173 | MS.gene44056:CDS |
| AAGGGTTGAGGAGCTTGAGA+AGG | 0.580524 | 1.3:-57903951 | MS.gene44056:CDS |
| TTGGAAAATAGTAAATTGGT+TGG | 0.582640 | 1.3:-57903659 | MS.gene44056:CDS |
| GAAGAGCTCGCGGAATGAAG+AGG | 0.582918 | 1.3:-57903756 | MS.gene44056:CDS |
| TGAGAAAGAAAGAAGGGTTG+AGG | 0.586230 | 1.3:-57903963 | MS.gene44056:CDS |
| GGTTGCTGTGGAGAAGGAAA+GGG | 0.589431 | 1.3:-57903690 | MS.gene44056:CDS |
| AAAGGTAAGAACTTGTGGAC+CGG | 0.591726 | 1.3:-57902594 | MS.gene44056:CDS |
| AATGAAGTCGTTAAGTTGCA+AGG | 0.591972 | 1.3:-57903470 | MS.gene44056:CDS |
| GTATTGAGAGTTTGACTGAG+GGG | 0.596823 | 1.3:-57903613 | MS.gene44056:CDS |
| GTCACAAGTTGTGGAAATGG+AGG | 0.603940 | 1.3:-57903261 | MS.gene44056:CDS |
| TAGGCAGCGTGAGGTTGATG+AGG | 0.607173 | 1.3:-57903540 | MS.gene44056:CDS |
| TTCTCTCTTAACCATATCCA+GGG | 0.608281 | 1.3:+57903571 | None:intergenic |
| CAAAGCTAAGGATGAGCTGG+TGG | 0.611150 | 1.3:-57902670 | MS.gene44056:CDS |
| TGAGGGTGTGAATAGTACTC+AGG | 0.615912 | 1.3:-57903831 | MS.gene44056:CDS |
| CTTCAACATCCATGGCGGCG+TGG | 0.620836 | 1.3:+57904218 | None:intergenic |
| TGAGGAAGTGGAGCTTGAGA+GGG | 0.621802 | 1.3:-57903189 | MS.gene44056:CDS |
| TTGACTGCATATGTTGCTAA+AGG | 0.622390 | 1.3:-57902537 | MS.gene44056:CDS |
| AGGTGAAATAAGTGTACTGA+AGG | 0.625603 | 1.3:-57903450 | MS.gene44056:CDS |
| GGATACTGTTTATAGGACCC+TGG | 0.628797 | 1.3:-57903588 | MS.gene44056:CDS |
| GTTGCAAGTTGTGGGACTGA+AGG | 0.629045 | 1.3:-57903030 | MS.gene44056:CDS |
| GATGGGTCATCATTGGTGGA+TGG | 0.631583 | 1.3:+57904334 | None:intergenic |
| CAACAGTAAGAAGTTTGATG+AGG | 0.631997 | 1.3:-57903309 | MS.gene44056:CDS |
| TGACGAGGCAACAAATAAGG+TGG | 0.639359 | 1.3:-57903063 | MS.gene44056:CDS |
| ACTCTCTTTGAGCTGCAATG+AGG | 0.642172 | 1.3:+57902877 | None:intergenic |
| CTTTGAGAAGAAGCTGAATG+CGG | 0.642555 | 1.3:+57904245 | None:intergenic |
| TGGGAAGATTCGTGAAATGG+AGG | 0.643009 | 1.3:-57903723 | MS.gene44056:CDS |
| GGAAACTATTGAGGTTGCTG+TGG | 0.643834 | 1.3:-57903702 | MS.gene44056:CDS |
| TGCTGAAGCTGAGTTGGTCA+AGG | 0.646705 | 1.3:-57902994 | MS.gene44056:CDS |
| GGCGAGAAGAGCTAGAGATG+AGG | 0.648893 | 1.3:-57903519 | MS.gene44056:CDS |
| CGTTAATCAAAACATCTATG+CGG | 0.652889 | 1.3:+57902922 | None:intergenic |
| CATCATGAAAAGATATGACG+AGG | 0.665707 | 1.3:-57903078 | MS.gene44056:CDS |
| ACATGCTTCTTCTCACCGCG+AGG | 0.668840 | 1.3:+57902744 | None:intergenic |
| GAGCTCGCGGAATGAAGAGG+CGG | 0.670628 | 1.3:-57903753 | MS.gene44056:CDS |
| GGGTGTGAATAGTACTCAGG+AGG | 0.677679 | 1.3:-57903828 | MS.gene44056:CDS |
| TCGCGGTGAGAAGAAGCATG+TGG | 0.678181 | 1.3:-57902742 | MS.gene44056:CDS |
| TTTCTCTTCAACATCCATGG+CGG | 0.680764 | 1.3:+57904213 | None:intergenic |
| GAAGATGAATGAGACAAACA+AGG | 0.682202 | 1.3:-57902955 | MS.gene44056:CDS |
| ATTGGAGAATAGGCAGCGTG+AGG | 0.687102 | 1.3:-57903549 | MS.gene44056:CDS |
| GGTGAAATAAGTGTACTGAA+GGG | 0.705436 | 1.3:-57903449 | MS.gene44056:CDS |
| ACATGTGTCTAAGGAAAGTG+TGG | 0.709564 | 1.3:-57902775 | MS.gene44056:CDS |
| AGTGTGGAAGTGATTCCTCG+CGG | 0.788854 | 1.3:-57902759 | MS.gene44056:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATCAATTCAAAGCAAACTT+TGG | - | chr1.3:57904116-57904135 | MS.gene44056:CDS | 25.0% |
| ! | GATGTTGGAAAATAGTAAAT+TGG | - | chr1.3:57903273-57903292 | MS.gene44056:CDS | 25.0% |
| ! | TGATGAAAAGAAAAACAAAG+TGG | - | chr1.3:57903789-57903808 | MS.gene44056:CDS | 25.0% |
| ! | TTGGAAAATAGTAAATTGGT+TGG | - | chr1.3:57903277-57903296 | MS.gene44056:CDS | 25.0% |
| !!! | AGATGTTTTGATTAACGAAA+AGG | - | chr1.3:57904020-57904039 | MS.gene44056:CDS | 25.0% |
| AACAAATAAGGTGGAGAATT+TGG | - | chr1.3:57903882-57903901 | MS.gene44056:CDS | 30.0% | |
| ATGTTATAAGAATGCTGTTG+AGG | - | chr1.3:57903729-57903748 | MS.gene44056:CDS | 30.0% | |
| CGTTAATCAAAACATCTATG+CGG | + | chr1.3:57904017-57904036 | None:intergenic | 30.0% | |
| GAAAAATGAGATTGAGTATG+AGG | - | chr1.3:57902841-57902860 | MS.gene44056:CDS | 30.0% | |
| TGAAAAGAAAAACAAAGTGG+AGG | - | chr1.3:57903792-57903811 | MS.gene44056:CDS | 30.0% | |
| TGTCTCAGGTTAATCATTAT+AGG | - | chr1.3:57903569-57903588 | MS.gene44056:CDS | 30.0% | |
| TTAAGAGAGAATTGGAGAAT+AGG | - | chr1.3:57903377-57903396 | MS.gene44056:CDS | 30.0% | |
| ! | AGATTTTGAATCTGAACAGA+TGG | + | chr1.3:57902623-57902642 | None:intergenic | 30.0% |
| ! | ATTTTTCTCTTCAACATCCA+TGG | + | chr1.3:57902729-57902748 | None:intergenic | 30.0% |
| ! | CAAAGAAAACATCGTTTTGA+AGG | + | chr1.3:57902763-57902782 | None:intergenic | 30.0% |
| ! | GATTTTGAATCTGAACAGAT+GGG | + | chr1.3:57902622-57902641 | None:intergenic | 30.0% |
| ! | GGTATTTGTTCCTTTCTTTT+TGG | + | chr1.3:57902537-57902556 | None:intergenic | 30.0% |
| ! | TGTGAAGAAGTCAATTTTGT+CGG | - | chr1.3:57903021-57903040 | MS.gene44056:CDS | 30.0% |
| AAAAGGCTGAGAAAGAAAGA+AGG | - | chr1.3:57902966-57902985 | MS.gene44056:CDS | 35.0% | |
| AAAATTGTAGCTAGAGAGTC+TGG | - | chr1.3:57903526-57903545 | MS.gene44056:CDS | 35.0% | |
| AAACCCTAATTCAGTGATCT+GGG | + | chr1.3:57902798-57902817 | None:intergenic | 35.0% | |
| AAAGGCTGAGAAAGAAAGAA+GGG | - | chr1.3:57902967-57902986 | MS.gene44056:CDS | 35.0% | |
| ACGGAAACTGTTTGATGAAA+AGG | - | chr1.3:57902949-57902968 | MS.gene44056:CDS | 35.0% | |
| AGGTGAAATAAGTGTACTGA+AGG | - | chr1.3:57903486-57903505 | MS.gene44056:CDS | 35.0% | |
| AGTATGAGGTTTCTGTTCAA+AGG | - | chr1.3:57902855-57902874 | MS.gene44056:CDS | 35.0% | |
| ATATGACGAGGCAACAAATA+AGG | - | chr1.3:57903870-57903889 | MS.gene44056:CDS | 35.0% | |
| ATTCTCTCTTAACCATATCC+AGG | + | chr1.3:57903369-57903388 | None:intergenic | 35.0% | |
| CAACAGTAAGAAGTTTGATG+AGG | - | chr1.3:57903627-57903646 | MS.gene44056:CDS | 35.0% | |
| CACATAAAGGTAAGAACTTG+TGG | - | chr1.3:57904337-57904356 | MS.gene44056:CDS | 35.0% | |
| CATCATGAAAAGATATGACG+AGG | - | chr1.3:57903858-57903877 | MS.gene44056:CDS | 35.0% | |
| GAAAAACAAAGTGGAGGATT+TGG | - | chr1.3:57903798-57903817 | MS.gene44056:CDS | 35.0% | |
| GAAGATGAATGAGACAAACA+AGG | - | chr1.3:57903981-57904000 | MS.gene44056:CDS | 35.0% | |
| GGATATGGTTAAGAGAGAAT+TGG | - | chr1.3:57903369-57903388 | MS.gene44056:CDS | 35.0% | |
| GGTGAAATAAGTGTACTGAA+GGG | - | chr1.3:57903487-57903506 | MS.gene44056:CDS | 35.0% | |
| GTATGAGGTTTCTGTTCAAA+GGG | - | chr1.3:57902856-57902875 | MS.gene44056:CDS | 35.0% | |
| GTTGAAGGAGAAGATTGATT+TGG | - | chr1.3:57903060-57903079 | MS.gene44056:CDS | 35.0% | |
| TACTGAATTGAAGCTTAAGC+AGG | - | chr1.3:57903831-57903850 | MS.gene44056:CDS | 35.0% | |
| TGAAATGGAGGAAACTATTG+AGG | - | chr1.3:57903225-57903244 | MS.gene44056:CDS | 35.0% | |
| TGATGAGGAGAAAAAGAAAG+TGG | - | chr1.3:57903642-57903661 | MS.gene44056:CDS | 35.0% | |
| TTCTCTCTTAACCATATCCA+GGG | + | chr1.3:57903368-57903387 | None:intergenic | 35.0% | |
| TTGACTGCATATGTTGCTAA+AGG | - | chr1.3:57904399-57904418 | MS.gene44056:CDS | 35.0% | |
| ! | AATGAAGTCGTTAAGTTGCA+AGG | - | chr1.3:57903466-57903485 | MS.gene44056:CDS | 35.0% |
| ! | AATTTGGAGTTGCAAGTTGT+GGG | - | chr1.3:57903898-57903917 | MS.gene44056:CDS | 35.0% |
| ! | AGTATTGAGAGTTTGACTGA+GGG | - | chr1.3:57903322-57903341 | MS.gene44056:CDS | 35.0% |
| ! | CTCGTCATATCTTTTCATGA+TGG | + | chr1.3:57903860-57903879 | None:intergenic | 35.0% |
| ! | GAGGTGAAGATTTTCAATCT+TGG | - | chr1.3:57903127-57903146 | MS.gene44056:CDS | 35.0% |
| !! | AAACAATGGATTACTGTCTC+AGG | - | chr1.3:57903555-57903574 | MS.gene44056:CDS | 35.0% |
| !! | AAGTATTGAGAGTTTGACTG+AGG | - | chr1.3:57903321-57903340 | MS.gene44056:CDS | 35.0% |
| !! | CAAGAAAGCATTCAAAGCTA+AGG | - | chr1.3:57904254-57904273 | MS.gene44056:CDS | 35.0% |
| !! | TAAATTGGTTGGTGAGAAGA+AGG | - | chr1.3:57903288-57903307 | MS.gene44056:CDS | 35.0% |
| AAACAAAGTGGAGGATTTGG+AGG | - | chr1.3:57903801-57903820 | MS.gene44056:CDS | 40.0% | |
| AAAGGTAAGAACTTGTGGAC+CGG | - | chr1.3:57904342-57904361 | MS.gene44056:CDS | 40.0% | |
| AAGACCCAGATCACTGAATT+AGG | - | chr1.3:57902791-57902810 | MS.gene44056:CDS | 40.0% | |
| AATGAGACAAACAAGGAGCT+AGG | - | chr1.3:57903988-57904007 | MS.gene44056:CDS | 40.0% | |
| ACATGTGTCTAAGGAAAGTG+TGG | - | chr1.3:57904161-57904180 | MS.gene44056:CDS | 40.0% | |
| AGACCCAGATCACTGAATTA+GGG | - | chr1.3:57902792-57902811 | MS.gene44056:CDS | 40.0% | |
| AGAGGAATGTTGAGAAGATG+AGG | - | chr1.3:57902918-57902937 | MS.gene44056:CDS | 40.0% | |
| AGGGAGAAGATGAAGGATTT+AGG | - | chr1.3:57902875-57902894 | MS.gene44056:CDS | 40.0% | |
| ATTCAAAGCTAAGGATGAGC+TGG | - | chr1.3:57904263-57904282 | MS.gene44056:CDS | 40.0% | |
| GAAACCCTAATTCAGTGATC+TGG | + | chr1.3:57902799-57902818 | None:intergenic | 40.0% | |
| GAAGGAAAGGGAAATGATGT+TGG | - | chr1.3:57903258-57903277 | MS.gene44056:CDS | 40.0% | |
| GAATGTTGAGAAGATGAGGT+TGG | - | chr1.3:57902922-57902941 | MS.gene44056:CDS | 40.0% | |
| GAATTTGCAGTCACAAGTTG+TGG | - | chr1.3:57903666-57903685 | MS.gene44056:CDS | 40.0% | |
| GAGGTTGAGAAGGTTAAAGT+TGG | - | chr1.3:57903436-57903455 | MS.gene44056:CDS | 40.0% | |
| GAGTCTGGAGAGAAAAACAA+TGG | - | chr1.3:57903541-57903560 | MS.gene44056:CDS | 40.0% | |
| GGGAGAAGATGAAGGATTTA+GGG | - | chr1.3:57902876-57902895 | MS.gene44056:CDS | 40.0% | |
| GTATTGAGAGTTTGACTGAG+GGG | - | chr1.3:57903323-57903342 | MS.gene44056:CDS | 40.0% | |
| TAAGAATGCTGTTGAGGAAG+TGG | - | chr1.3:57903735-57903754 | MS.gene44056:CDS | 40.0% | |
| TGAAGAGAAAAATCTCGCCT+TGG | - | chr1.3:57902736-57902755 | MS.gene44056:CDS | 40.0% | |
| TGAGAAAGAAAGAAGGGTTG+AGG | - | chr1.3:57902973-57902992 | MS.gene44056:CDS | 40.0% | |
| TGTTCAAAGGGAGAAGATGA+AGG | - | chr1.3:57902868-57902887 | MS.gene44056:CDS | 40.0% | |
| TGTTTATAGGACCCTGGATA+TGG | - | chr1.3:57903354-57903373 | MS.gene44056:CDS | 40.0% | |
| TTTCTCTTCAACATCCATGG+CGG | + | chr1.3:57902726-57902745 | None:intergenic | 40.0% | |
| ! | CTTTGAGAAGAACGTTGTTG+AGG | + | chr1.3:57902652-57902671 | None:intergenic | 40.0% |
| ! | CTTTGAGAAGAAGCTGAATG+CGG | + | chr1.3:57902694-57902713 | None:intergenic | 40.0% |
| ! | GAAGGTGATTGATGAGTTGA+AGG | - | chr1.3:57903045-57903064 | MS.gene44056:CDS | 40.0% |
| ! | GAAGTCAATTTTGTCGGTGA+AGG | - | chr1.3:57903027-57903046 | MS.gene44056:CDS | 40.0% |
| ! | GAATTTGGAGTTGCAAGTTG+TGG | - | chr1.3:57903897-57903916 | MS.gene44056:CDS | 40.0% |
| ! | GTCTTTTGCTGAAGAACTTG+AGG | - | chr1.3:57904227-57904246 | MS.gene44056:CDS | 40.0% |
| !! | GAAGATTGATTTGGTGGTGA+AGG | - | chr1.3:57903069-57903088 | MS.gene44056:CDS | 40.0% |
| !! | GAAGGAGAAGATTGATTTGG+TGG | - | chr1.3:57903063-57903082 | MS.gene44056:CDS | 40.0% |
| !! | GGTTAAGGTTTTGTGGTCTA+GGG | + | chr1.3:57902570-57902589 | None:intergenic | 40.0% |
| !!! | AACATCGTTTTGAAGGTCCA+AGG | + | chr1.3:57902756-57902775 | None:intergenic | 40.0% |
| AACAGATGGGTCATCATTGG+TGG | + | chr1.3:57902609-57902628 | None:intergenic | 45.0% | |
| AAGGAGAAGAAAGAGGCTGA+GGG | - | chr1.3:57903088-57903107 | MS.gene44056:CDS | 45.0% | |
| AATGCGGTTTCTGTGATTGG+TGG | + | chr1.3:57902678-57902697 | None:intergenic | 45.0% | |
| ACTCTCTTTGAGCTGCAATG+AGG | + | chr1.3:57904062-57904081 | None:intergenic | 45.0% | |
| AGAAGATGAGGTTGGATGCA+CGG | - | chr1.3:57902930-57902949 | MS.gene44056:CDS | 45.0% | |
| AGCACAAATAGTAGCAGCAG+AGG | + | chr1.3:57904373-57904392 | None:intergenic | 45.0% | |
| AGCTAGAGATGAGGTTGAGA+AGG | - | chr1.3:57903426-57903445 | MS.gene44056:CDS | 45.0% | |
| AGGGGAGGGATACTGTTTAT+AGG | - | chr1.3:57903341-57903360 | MS.gene44056:CDS | 45.0% | |
| AGTAGCAGCAGAGGTTAAAC+CGG | + | chr1.3:57904364-57904383 | None:intergenic | 45.0% | |
| CACTGTTGCACATGTGTCTA+AGG | - | chr1.3:57904152-57904171 | MS.gene44056:CDS | 45.0% | |
| CTGAACAGATGGGTCATCAT+TGG | + | chr1.3:57902612-57902631 | None:intergenic | 45.0% | |
| CTGAATGCGGTTTCTGTGAT+TGG | + | chr1.3:57902681-57902700 | None:intergenic | 45.0% | |
| GAGAGGGATAACGTCAGAAA+GGG | - | chr1.3:57903763-57903782 | MS.gene44056:CDS | 45.0% | |
| GCAGTCACAAGTTGTGGAAA+TGG | - | chr1.3:57903672-57903691 | MS.gene44056:CDS | 45.0% | |
| GGAAACTATTGAGGTTGCTG+TGG | - | chr1.3:57903234-57903253 | MS.gene44056:CDS | 45.0% | |
| GGATACTGTTTATAGGACCC+TGG | - | chr1.3:57903348-57903367 | MS.gene44056:CDS | 45.0% | |
| GTCACAAGTTGTGGAAATGG+AGG | - | chr1.3:57903675-57903694 | MS.gene44056:CDS | 45.0% | |
| TATTGAGGTTGCTGTGGAGA+AGG | - | chr1.3:57903240-57903259 | MS.gene44056:CDS | 45.0% | |
| TCTGCGTCTGATGCACATAA+AGG | - | chr1.3:57904324-57904343 | MS.gene44056:CDS | 45.0% | |
| TGACGAGGCAACAAATAAGG+TGG | - | chr1.3:57903873-57903892 | MS.gene44056:CDS | 45.0% | |
| TGAGAATGCTGAAGCTGAGT+TGG | - | chr1.3:57903936-57903955 | MS.gene44056:CDS | 45.0% | |
| TGAGAGGGATAACGTCAGAA+AGG | - | chr1.3:57903762-57903781 | MS.gene44056:CDS | 45.0% | |
| TGGGAAGATTCGTGAAATGG+AGG | - | chr1.3:57903213-57903232 | MS.gene44056:CDS | 45.0% | |
| ! | GAAGGATTTAGGGTTGTGTC+TGG | - | chr1.3:57902886-57902905 | MS.gene44056:CDS | 45.0% |
| ! | GTGGTCTAGGGTTTGAGATT+GGG | + | chr1.3:57902558-57902577 | None:intergenic | 45.0% |
| ! | GTTGTGGGGTTAAGGTTTTG+TGG | + | chr1.3:57902577-57902596 | None:intergenic | 45.0% |
| ! | TGAGGGTGTGAATAGTACTC+AGG | - | chr1.3:57903105-57903124 | MS.gene44056:CDS | 45.0% |
| ! | TGTGGTCTAGGGTTTGAGAT+TGG | + | chr1.3:57902559-57902578 | None:intergenic | 45.0% |
| !! | GGGTTAAGGTTTTGTGGTCT+AGG | + | chr1.3:57902571-57902590 | None:intergenic | 45.0% |
| !! | TGTACTGAAGGGTGTTGTAG+AGG | - | chr1.3:57903498-57903517 | MS.gene44056:CDS | 45.0% |
| !!! | ATGAGGTTTTGAAGAGCTCG+CGG | - | chr1.3:57903170-57903189 | MS.gene44056:CDS | 45.0% |
| AAGGGTTGAGGAGCTTGAGA+AGG | - | chr1.3:57902985-57903004 | MS.gene44056:CDS | 50.0% | |
| AGGTTGCTGTGGAGAAGGAA+AGG | - | chr1.3:57903245-57903264 | MS.gene44056:CDS | 50.0% | |
| AGTGTGGAAGTGATTCCTCG+CGG | - | chr1.3:57904177-57904196 | MS.gene44056:CDS | 50.0% | |
| ATTGGAGAATAGGCAGCGTG+AGG | - | chr1.3:57903387-57903406 | MS.gene44056:CDS | 50.0% | |
| CAAAGCTAAGGATGAGCTGG+TGG | - | chr1.3:57904266-57904285 | MS.gene44056:CDS | 50.0% | |
| GAAGGAGAAGAAAGAGGCTG+AGG | - | chr1.3:57903087-57903106 | MS.gene44056:CDS | 50.0% | |
| GATGGGTCATCATTGGTGGA+TGG | + | chr1.3:57902605-57902624 | None:intergenic | 50.0% | |
| GCGTGGGAAGATTCGTGAAA+TGG | - | chr1.3:57903210-57903229 | MS.gene44056:CDS | 50.0% | |
| GCTTGAGAAGGACTGGGATT+TGG | - | chr1.3:57902997-57903016 | MS.gene44056:CDS | 50.0% | |
| GGGTGTGAATAGTACTCAGG+AGG | - | chr1.3:57903108-57903127 | MS.gene44056:CDS | 50.0% | |
| GGTGGTGAAGGAGAAGAAAG+AGG | - | chr1.3:57903081-57903100 | MS.gene44056:CDS | 50.0% | |
| GGTTGCTGTGGAGAAGGAAA+GGG | - | chr1.3:57903246-57903265 | MS.gene44056:CDS | 50.0% | |
| GTTGCAAGTTGTGGGACTGA+AGG | - | chr1.3:57903906-57903925 | MS.gene44056:CDS | 50.0% | |
| TGAGAGTTTGACTGAGGGGA+GGG | - | chr1.3:57903327-57903346 | MS.gene44056:CDS | 50.0% | |
| TGAGCTGCAGCAGGTTAATG+AGG | - | chr1.3:57903153-57903172 | MS.gene44056:CDS | 50.0% | |
| TGAGGAAGTGGAGCTTGAGA+GGG | - | chr1.3:57903747-57903766 | MS.gene44056:CDS | 50.0% | |
| TGAGGAGCTTGAGAAGGACT+GGG | - | chr1.3:57902991-57903010 | MS.gene44056:CDS | 50.0% | |
| TGTGTCTGGAGAGTGAGAAG+AGG | - | chr1.3:57902900-57902919 | MS.gene44056:CDS | 50.0% | |
| TTGAGAGTTTGACTGAGGGG+AGG | - | chr1.3:57903326-57903345 | MS.gene44056:CDS | 50.0% | |
| TTGAGGAAGTGGAGCTTGAG+AGG | - | chr1.3:57903746-57903765 | MS.gene44056:CDS | 50.0% | |
| TTGAGGAGCTTGAGAAGGAC+TGG | - | chr1.3:57902990-57903009 | MS.gene44056:CDS | 50.0% | |
| ! | TCATCATTGGTGGATGGTGG+TGG | + | chr1.3:57902599-57902618 | None:intergenic | 50.0% |
| ! | TGCAGCTCAAAGAGAGTGCA+AGG | - | chr1.3:57904065-57904084 | MS.gene44056:CDS | 50.0% |
| !! | GGTTGGTGAGAAGAAGGAGA+TGG | - | chr1.3:57903294-57903313 | MS.gene44056:CDS | 50.0% |
| !! | TGAAGGGTGTTGTAGAGGAG+TGG | - | chr1.3:57903503-57903522 | MS.gene44056:CDS | 50.0% |
| !! | TGCTGAAGCTGAGTTGGTCA+AGG | - | chr1.3:57903942-57903961 | MS.gene44056:CDS | 50.0% |
| AATGAAGAGGCGGTGATGCG+TGG | - | chr1.3:57903193-57903212 | MS.gene44056:CDS | 55.0% | |
| ACATGCTTCTTCTCACCGCG+AGG | + | chr1.3:57904195-57904214 | None:intergenic | 55.0% | |
| ATGAAGAGGCGGTGATGCGT+GGG | - | chr1.3:57903194-57903213 | MS.gene44056:CDS | 55.0% | |
| GAAGAGCTCGCGGAATGAAG+AGG | - | chr1.3:57903180-57903199 | MS.gene44056:CDS | 55.0% | |
| GGCGAGAAGAGCTAGAGATG+AGG | - | chr1.3:57903417-57903436 | MS.gene44056:CDS | 55.0% | |
| TCTTGGACTTGAGCTGCAGC+AGG | - | chr1.3:57903144-57903163 | MS.gene44056:CDS | 55.0% | |
| ! | GGGTCATCATTGGTGGATGG+TGG | + | chr1.3:57902602-57902621 | None:intergenic | 55.0% |
| ! | TCGCGGTGAGAAGAAGCATG+TGG | - | chr1.3:57904194-57904213 | MS.gene44056:CDS | 55.0% |
| !! | TAGGCAGCGTGAGGTTGATG+AGG | - | chr1.3:57903396-57903415 | MS.gene44056:CDS | 55.0% |
| !! | TGGTGGATGGTGGTGGTTGT+GGG | + | chr1.3:57902592-57902611 | None:intergenic | 55.0% |
| !! | TGGTGGTGGTTGTGGGGTTA+AGG | + | chr1.3:57902585-57902604 | None:intergenic | 55.0% |
| !! | TTGGTGGATGGTGGTGGTTG+TGG | + | chr1.3:57902593-57902612 | None:intergenic | 55.0% |
| CAAAGCTAACCACGCCGCCA+TGG | - | chr1.3:57902709-57902728 | MS.gene44056:CDS | 60.0% | |
| CTTCAACATCCATGGCGGCG+TGG | + | chr1.3:57902721-57902740 | None:intergenic | 60.0% | |
| GAGCTCGCGGAATGAAGAGG+CGG | - | chr1.3:57903183-57903202 | MS.gene44056:CDS | 60.0% | |
| !! | GGTGGATGGTGGTGGTTGTG+GGG | + | chr1.3:57902591-57902610 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57902530 | 57904428 | 57902530 | ID=MS.gene44056 |
| chr1.3 | mRNA | 57902530 | 57904428 | 57902530 | ID=MS.gene44056.t1;Parent=MS.gene44056 |
| chr1.3 | exon | 57902530 | 57904428 | 57902530 | ID=MS.gene44056.t1.exon1;Parent=MS.gene44056.t1 |
| chr1.3 | CDS | 57902530 | 57904428 | 57902530 | ID=cds.MS.gene44056.t1;Parent=MS.gene44056.t1 |
| Gene Sequence |
| Protein sequence |
