AlfalfaGEDB | MS.gene91547

M. sativa cultivar XinJiangDaYe / MS.gene91547

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91547.t1	XP_013469029.1	95.6	297	13	0	55	351	336	632	2.40E-85	325.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91547.t1	A0A072VN55	95.6	297	13	0	55	351	336	632	1.7e-85	325.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene91547	0.818713	1.70E-52	-1.69E-46
MS.gene049151	MS.gene91547	0.803292	3.74E-49	-1.69E-46
MS.gene049153	MS.gene91547	0.815571	8.64E-52	-1.69E-46
MS.gene049236	MS.gene91547	-0.800833	1.20E-48	-1.69E-46
MS.gene049260	MS.gene91547	0.823255	1.53E-53	-1.69E-46
MS.gene049284	MS.gene91547	0.80079	1.22E-48	-1.69E-46
MS.gene049351	MS.gene91547	0.835127	2.01E-56	-1.69E-46
MS.gene049356	MS.gene91547	0.810702	1.01E-50	-1.69E-46
MS.gene049389	MS.gene91547	0.825806	3.84E-54	-1.69E-46
MS.gene049491	MS.gene91547	0.852016	6.09E-61	-1.69E-46
MS.gene049599	MS.gene91547	-0.838115	3.48E-57	-1.69E-46
MS.gene049661	MS.gene91547	0.848636	5.40E-60	-1.69E-46
MS.gene049662	MS.gene91547	0.851312	9.63E-61	-1.69E-46
MS.gene049758	MS.gene91547	0.913171	8.38E-84	-1.69E-46
MS.gene049910	MS.gene91547	0.836679	8.12E-57	-1.69E-46
MS.gene050076	MS.gene91547	0.81262	3.87E-51	-1.69E-46
MS.gene050128	MS.gene91547	0.879484	1.20E-69	-1.69E-46
MS.gene050215	MS.gene91547	0.811703	6.13E-51	-1.69E-46
MS.gene050227	MS.gene91547	0.805223	1.48E-49	-1.69E-46
MS.gene050301	MS.gene91547	0.898886	3.42E-77	-1.69E-46
MS.gene050319	MS.gene91547	-0.824293	8.73E-54	-1.69E-46
MS.gene050397	MS.gene91547	0.846473	2.12E-59	-1.69E-46
MS.gene050432	MS.gene91547	0.819921	9.01E-53	-1.69E-46
MS.gene050464	MS.gene91547	0.816203	6.24E-52	-1.69E-46
MS.gene050516	MS.gene91547	0.826675	2.38E-54	-1.69E-46
MS.gene050529	MS.gene91547	0.83158	1.54E-55	-1.69E-46
MS.gene050558	MS.gene91547	0.824512	7.75E-54	-1.69E-46
MS.gene050623	MS.gene91547	-0.815958	7.08E-52	-1.69E-46
MS.gene050670	MS.gene91547	0.812705	3.71E-51	-1.69E-46
MS.gene050762	MS.gene91547	0.831168	1.94E-55	-1.69E-46
MS.gene050763	MS.gene91547	0.833278	5.85E-56	-1.69E-46
MS.gene050787	MS.gene91547	0.820256	7.55E-53	-1.69E-46
MS.gene050971	MS.gene91547	0.830261	3.24E-55	-1.69E-46
MS.gene05101	MS.gene91547	0.843678	1.21E-58	-1.69E-46
MS.gene05119	MS.gene91547	-0.829483	5.02E-55	-1.69E-46
MS.gene051360	MS.gene91547	0.811424	7.05E-51	-1.69E-46
MS.gene051471	MS.gene91547	0.838937	2.14E-57	-1.69E-46
MS.gene051487	MS.gene91547	0.822244	2.63E-53	-1.69E-46
MS.gene051662	MS.gene91547	0.811506	6.77E-51	-1.69E-46
MS.gene051663	MS.gene91547	0.850666	1.47E-60	-1.69E-46
MS.gene051860	MS.gene91547	0.899808	1.37E-77	-1.69E-46
MS.gene051877	MS.gene91547	0.815428	9.29E-52	-1.69E-46
MS.gene052077	MS.gene91547	0.818012	2.45E-52	-1.69E-46
MS.gene052078	MS.gene91547	0.837584	4.77E-57	-1.69E-46
MS.gene052178	MS.gene91547	0.870221	1.72E-66	-1.69E-46
MS.gene052188	MS.gene91547	0.868155	8.06E-66	-1.69E-46
MS.gene052207	MS.gene91547	0.864748	9.73E-65	-1.69E-46
MS.gene052253	MS.gene91547	0.855399	6.47E-62	-1.69E-46
MS.gene052287	MS.gene91547	0.829585	4.74E-55	-1.69E-46
MS.gene052310	MS.gene91547	0.842312	2.79E-58	-1.69E-46
MS.gene052326	MS.gene91547	0.845027	5.24E-59	-1.69E-46
MS.gene052340	MS.gene91547	0.850289	1.87E-60	-1.69E-46
MS.gene052485	MS.gene91547	0.829659	4.55E-55	-1.69E-46
MS.gene05316	MS.gene91547	0.833432	5.35E-56	-1.69E-46
MS.gene053209	MS.gene91547	0.844216	8.67E-59	-1.69E-46
MS.gene053557	MS.gene91547	0.840678	7.52E-58	-1.69E-46
MS.gene053559	MS.gene91547	0.830953	2.20E-55	-1.69E-46
MS.gene053577	MS.gene91547	0.801381	9.25E-49	-1.69E-46
MS.gene053758	MS.gene91547	0.805913	1.06E-49	-1.69E-46
MS.gene053836	MS.gene91547	0.908438	1.71E-81	-1.69E-46
MS.gene054010	MS.gene91547	0.835256	1.87E-56	-1.69E-46
MS.gene054011	MS.gene91547	0.859479	4.02E-63	-1.69E-46
MS.gene054012	MS.gene91547	0.84795	8.36E-60	-1.69E-46
MS.gene054013	MS.gene91547	0.841373	4.94E-58	-1.69E-46
MS.gene054123	MS.gene91547	0.83545	1.67E-56	-1.69E-46
MS.gene054184	MS.gene91547	0.811369	7.25E-51	-1.69E-46
MS.gene054185	MS.gene91547	0.814367	1.60E-51	-1.69E-46
MS.gene054214	MS.gene91547	0.811961	5.39E-51	-1.69E-46
MS.gene054379	MS.gene91547	0.836478	9.14E-57	-1.69E-46
MS.gene054473	MS.gene91547	0.864452	1.20E-64	-1.69E-46
MS.gene054542	MS.gene91547	0.816732	4.75E-52	-1.69E-46
MS.gene05455	MS.gene91547	0.824647	7.21E-54	-1.69E-46
MS.gene054930	MS.gene91547	0.831638	1.49E-55	-1.69E-46
MS.gene054955	MS.gene91547	0.802011	6.87E-49	-1.69E-46
MS.gene054983	MS.gene91547	0.80948	1.85E-50	-1.69E-46
MS.gene055116	MS.gene91547	0.834677	2.61E-56	-1.69E-46
MS.gene055277	MS.gene91547	0.903157	4.64E-79	-1.69E-46
MS.gene055303	MS.gene91547	0.809678	1.68E-50	-1.69E-46
MS.gene055390	MS.gene91547	0.871717	5.53E-67	-1.69E-46
MS.gene055422	MS.gene91547	0.905806	2.91E-80	-1.69E-46
MS.gene055428	MS.gene91547	0.868649	5.58E-66	-1.69E-46
MS.gene055604	MS.gene91547	0.850984	1.19E-60	-1.69E-46
MS.gene055712	MS.gene91547	0.800691	1.28E-48	-1.69E-46
MS.gene055859	MS.gene91547	0.829734	4.36E-55	-1.69E-46
MS.gene056069	MS.gene91547	-0.815955	7.09E-52	-1.69E-46
MS.gene056191	MS.gene91547	0.843486	1.36E-58	-1.69E-46
MS.gene056314	MS.gene91547	0.833862	4.18E-56	-1.69E-46
MS.gene056407	MS.gene91547	0.816023	6.85E-52	-1.69E-46
MS.gene056410	MS.gene91547	0.849981	2.28E-60	-1.69E-46
MS.gene056447	MS.gene91547	0.810122	1.35E-50	-1.69E-46
MS.gene056609	MS.gene91547	0.803705	3.07E-49	-1.69E-46
MS.gene056612	MS.gene91547	0.845673	3.51E-59	-1.69E-46
MS.gene056875	MS.gene91547	0.8073	5.41E-50	-1.69E-46
MS.gene056902	MS.gene91547	0.833192	6.14E-56	-1.69E-46
MS.gene056931	MS.gene91547	0.866609	2.52E-65	-1.69E-46
MS.gene056933	MS.gene91547	0.860877	1.52E-63	-1.69E-46
MS.gene056935	MS.gene91547	0.851631	7.83E-61	-1.69E-46
MS.gene056979	MS.gene91547	0.803343	3.65E-49	-1.69E-46
MS.gene05702	MS.gene91547	0.831177	1.93E-55	-1.69E-46
MS.gene057121	MS.gene91547	0.84522	4.65E-59	-1.69E-46
MS.gene057123	MS.gene91547	0.811084	8.36E-51	-1.69E-46
MS.gene057245	MS.gene91547	0.850037	2.20E-60	-1.69E-46
MS.gene05733	MS.gene91547	0.816123	6.50E-52	-1.69E-46
MS.gene057439	MS.gene91547	0.806376	8.48E-50	-1.69E-46
MS.gene057448	MS.gene91547	0.862483	4.91E-64	-1.69E-46
MS.gene057449	MS.gene91547	0.856583	2.92E-62	-1.69E-46
MS.gene057450	MS.gene91547	0.864772	9.56E-65	-1.69E-46
MS.gene057469	MS.gene91547	0.862717	4.16E-64	-1.69E-46
MS.gene057779	MS.gene91547	0.839904	1.20E-57	-1.69E-46
MS.gene057782	MS.gene91547	0.800246	1.58E-48	-1.69E-46
MS.gene057796	MS.gene91547	0.812771	3.59E-51	-1.69E-46
MS.gene058002	MS.gene91547	0.875748	2.41E-68	-1.69E-46
MS.gene058082	MS.gene91547	0.825061	5.75E-54	-1.69E-46
MS.gene05811	MS.gene91547	0.901244	3.26E-78	-1.69E-46
MS.gene058142	MS.gene91547	0.803731	3.03E-49	-1.69E-46
MS.gene058293	MS.gene91547	0.813317	2.72E-51	-1.69E-46
MS.gene05842	MS.gene91547	0.825799	3.85E-54	-1.69E-46
MS.gene058484	MS.gene91547	0.834474	2.93E-56	-1.69E-46
MS.gene058660	MS.gene91547	0.880499	5.22E-70	-1.69E-46
MS.gene058710	MS.gene91547	0.814795	1.28E-51	-1.69E-46
MS.gene058845	MS.gene91547	0.846097	2.69E-59	-1.69E-46
MS.gene05886	MS.gene91547	0.804691	1.91E-49	-1.69E-46
MS.gene058928	MS.gene91547	0.849079	4.07E-60	-1.69E-46
MS.gene059033	MS.gene91547	-0.804909	1.72E-49	-1.69E-46
MS.gene05907	MS.gene91547	0.888806	4.26E-73	-1.69E-46
MS.gene059285	MS.gene91547	0.822547	2.23E-53	-1.69E-46
MS.gene059294	MS.gene91547	0.858003	1.11E-62	-1.69E-46
MS.gene059342	MS.gene91547	0.824969	6.05E-54	-1.69E-46
MS.gene059366	MS.gene91547	0.810944	8.96E-51	-1.69E-46
MS.gene059518	MS.gene91547	0.855158	7.61E-62	-1.69E-46
MS.gene059597	MS.gene91547	0.880844	3.93E-70	-1.69E-46
MS.gene05959	MS.gene91547	0.803281	3.76E-49	-1.69E-46
MS.gene059676	MS.gene91547	0.845007	5.31E-59	-1.69E-46
MS.gene059688	MS.gene91547	0.868429	6.57E-66	-1.69E-46
MS.gene059692	MS.gene91547	0.868943	4.48E-66	-1.69E-46
MS.gene059695	MS.gene91547	0.859648	3.58E-63	-1.69E-46
MS.gene059708	MS.gene91547	0.815771	7.79E-52	-1.69E-46
MS.gene059711	MS.gene91547	0.821326	4.29E-53	-1.69E-46
MS.gene059807	MS.gene91547	0.822075	2.88E-53	-1.69E-46
MS.gene05984	MS.gene91547	0.910591	1.58E-82	-1.69E-46
MS.gene059894	MS.gene91547	0.864601	1.08E-64	-1.69E-46
MS.gene059899	MS.gene91547	0.81388	2.05E-51	-1.69E-46
MS.gene059974	MS.gene91547	0.815424	9.31E-52	-1.69E-46
MS.gene060005	MS.gene91547	0.81991	9.06E-53	-1.69E-46
MS.gene06037	MS.gene91547	0.859396	4.26E-63	-1.69E-46
MS.gene060476	MS.gene91547	0.817843	2.67E-52	-1.69E-46
MS.gene060495	MS.gene91547	0.843954	1.02E-58	-1.69E-46
MS.gene060559	MS.gene91547	0.871511	6.46E-67	-1.69E-46
MS.gene060804	MS.gene91547	0.801977	6.98E-49	-1.69E-46
MS.gene060837	MS.gene91547	0.807766	4.31E-50	-1.69E-46
MS.gene060986	MS.gene91547	0.805171	1.52E-49	-1.69E-46
MS.gene061049	MS.gene91547	0.875707	2.49E-68	-1.69E-46
MS.gene061051	MS.gene91547	-0.849514	3.08E-60	-1.69E-46
MS.gene061071	MS.gene91547	0.808181	3.51E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene60546	MS.gene91547	PPI
MS.gene90302	MS.gene91547	PPI
MS.gene49944	MS.gene91547	PPI
MS.gene012589	MS.gene91547	PPI
MS.gene053226	MS.gene91547	PPI
MS.gene035599	MS.gene91547	PPI
MS.gene018833	MS.gene91547	PPI
MS.gene042282	MS.gene91547	PPI
MS.gene047773	MS.gene91547	PPI
MS.gene60282	MS.gene91547	PPI
MS.gene05308	MS.gene91547	PPI
MS.gene91307	MS.gene91547	PPI
MS.gene91547	MS.gene000608	PPI
MS.gene07878	MS.gene91547	PPI
MS.gene012546	MS.gene91547	PPI
MS.gene035570	MS.gene91547	PPI
MS.gene96690	MS.gene91547	PPI
MS.gene056884	MS.gene91547	PPI
MS.gene91547	MS.gene012586	PPI
MS.gene006075	MS.gene91547	PPI
MS.gene055308	MS.gene91547	PPI
MS.gene046942	MS.gene91547	PPI
MS.gene064542	MS.gene91547	PPI
MS.gene010494	MS.gene91547	PPI
MS.gene64538	MS.gene91547	PPI
MS.gene20014	MS.gene91547	PPI
MS.gene05515	MS.gene91547	PPI
MS.gene61430	MS.gene91547	PPI
MS.gene58877	MS.gene91547	PPI
MS.gene81752	MS.gene91547	PPI
MS.gene91547	MS.gene042280	PPI
MS.gene62095	MS.gene91547	PPI
MS.gene011293	MS.gene91547	PPI
MS.gene88847	MS.gene91547	PPI
MS.gene88066	MS.gene91547	PPI
MS.gene012490	MS.gene91547	PPI
MS.gene040998	MS.gene91547	PPI
MS.gene065746	MS.gene91547	PPI
MS.gene78077	MS.gene91547	PPI
MS.gene86666	MS.gene91547	PPI
MS.gene92358	MS.gene91547	PPI
MS.gene001928	MS.gene91547	PPI
MS.gene33202	MS.gene91547	PPI
MS.gene91547	MS.gene035629	PPI
MS.gene065590	MS.gene91547	PPI
MS.gene32631	MS.gene91547	PPI
MS.gene072892	MS.gene91547	PPI
MS.gene065748	MS.gene91547	PPI
MS.gene034858	MS.gene91547	PPI
MS.gene044806	MS.gene91547	PPI
MS.gene014834	MS.gene91547	PPI
MS.gene035571	MS.gene91547	PPI
MS.gene041002	MS.gene91547	PPI
MS.gene034251	MS.gene91547	PPI
MS.gene005816	MS.gene91547	PPI
MS.gene91547	MS.gene015986	PPI
MS.gene91547	MS.gene60765	PPI
MS.gene73119	MS.gene91547	PPI
MS.gene40741	MS.gene91547	PPI
MS.gene81853	MS.gene91547	PPI
MS.gene33917	MS.gene91547	PPI
MS.gene71616	MS.gene91547	PPI
MS.gene035805	MS.gene91547	PPI
MS.gene91547	MS.gene61697	PPI
MS.gene59359	MS.gene91547	PPI
MS.gene001733	MS.gene91547	PPI
MS.gene024961	MS.gene91547	PPI
MS.gene042281	MS.gene91547	PPI
MS.gene30352	MS.gene91547	PPI
MS.gene40526	MS.gene91547	PPI
MS.gene012587	MS.gene91547	PPI
MS.gene052433	MS.gene91547	PPI
MS.gene67063	MS.gene91547	PPI
MS.gene57783	MS.gene91547	PPI
MS.gene91547	MS.gene91723	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91547.t1	MTR_1g082215	95.442	351	16	0	1	351	282	632	0.0	661

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene91547.t1	AT5G27330	33.032	221	138	3	135	348	408	625	1.02e-22	99.8
MS.gene91547.t1	AT3G05130	27.632	228	133	5	114	338	423	621	6.21e-13	70.1

Find 56 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACAAATAAGGTGGAGAATT+TGG	0.209500	1.2:+60641090	MS.gene91547:CDS
TGTCTCAGGTTAATCATTAT+AGG	0.291389	1.2:+60640777	MS.gene91547:CDS
CACTGTTGCACATGTGTCTA+AGG	0.328802	1.2:+60641360	MS.gene91547:CDS
ATATGACGAGGCAACAAATA+AGG	0.371426	1.2:+60641078	MS.gene91547:CDS
AATCAATTCAAAGCAAACTT+TGG	0.409026	1.2:+60641324	MS.gene91547:CDS
AGCTAGAGATGAGGTTGAGA+AGG	0.410360	1.2:+60640634	MS.gene91547:CDS
GGATATGGTTAAGAGAGAAT+TGG	0.418650	1.2:+60640577	None:intergenic
TCTGCGTCTGATGCACATAA+AGG	0.420247	1.2:+60641532	MS.gene91547:CDS
GCAGTCACAAGTTGTGGAAA+TGG	0.421287	1.2:+60640880	MS.gene91547:CDS
TTAAGAGAGAATTGGAGAAT+AGG	0.439435	1.2:+60640585	MS.gene91547:CDS
AAAATTGTAGCTAGAGAGTC+TGG	0.443169	1.2:+60640734	MS.gene91547:CDS
TAAGAATGCTGTTGAGGAAG+TGG	0.466160	1.2:+60640943	MS.gene91547:CDS
GAGGTTGAGAAGGTTAAAGT+TGG	0.473556	1.2:+60640644	MS.gene91547:CDS
AATTTGGAGTTGCAAGTTGT+GGG	0.486287	1.2:+60641106	MS.gene91547:CDS
AAACAATGGATTACTGTCTC+AGG	0.487360	1.2:+60640763	MS.gene91547:CDS
TACTGAATTGAAGCTTAAGC+AGG	0.508643	1.2:+60641039	MS.gene91547:CDS
GAATTTGCAGTCACAAGTTG+TGG	0.509082	1.2:+60640874	MS.gene91547:CDS
AGTAGCAGCAGAGGTTAAAC+CGG	0.511423	1.2:-60641569	None:intergenic
GAATTTGGAGTTGCAAGTTG+TGG	0.512655	1.2:+60641105	MS.gene91547:CDS
CACATAAAGGTAAGAACTTG+TGG	0.519666	1.2:+60641545	MS.gene91547:CDS
TGTACTGAAGGGTGTTGTAG+AGG	0.520552	1.2:+60640706	MS.gene91547:CDS
AGCACAAATAGTAGCAGCAG+AGG	0.529268	1.2:-60641578	None:intergenic
TTGAGGAAGTGGAGCTTGAG+AGG	0.534554	1.2:+60640954	MS.gene91547:CDS
CAAGAAAGCATTCAAAGCTA+AGG	0.537974	1.2:+60641462	MS.gene91547:CDS
AATGAGACAAACAAGGAGCT+AGG	0.538433	1.2:+60641196	MS.gene91547:CDS
AAACAAAGTGGAGGATTTGG+AGG	0.546631	1.2:+60641009	MS.gene91547:CDS
ATTCAAAGCTAAGGATGAGC+TGG	0.556043	1.2:+60641471	MS.gene91547:CDS
TGAAGGGTGTTGTAGAGGAG+TGG	0.561592	1.2:+60640711	MS.gene91547:CDS
TGAGAGGGATAACGTCAGAA+AGG	0.563589	1.2:+60640970	MS.gene91547:CDS
TGAGAATGCTGAAGCTGAGT+TGG	0.565780	1.2:+60641144	MS.gene91547:CDS
TGCAGCTCAAAGAGAGTGCA+AGG	0.569535	1.2:+60641273	MS.gene91547:CDS
ATGTTATAAGAATGCTGTTG+AGG	0.573650	1.2:+60640937	MS.gene91547:CDS
GAGAGGGATAACGTCAGAAA+GGG	0.575443	1.2:+60640971	MS.gene91547:CDS
AAAGGTAAGAACTTGTGGAC+CGG	0.591726	1.2:+60641550	MS.gene91547:CDS
AATGAAGTCGTTAAGTTGCA+AGG	0.591972	1.2:+60640674	MS.gene91547:CDS
GTCACAAGTTGTGGAAATGG+AGG	0.603940	1.2:+60640883	MS.gene91547:CDS
TAGGCAGCGTGAGGTTGATG+AGG	0.607173	1.2:+60640604	MS.gene91547:CDS
CAAAGCTAAGGATGAGCTGG+TGG	0.611150	1.2:+60641474	MS.gene91547:CDS
TGAGGAAGTGGAGCTTGAGA+GGG	0.621802	1.2:+60640955	MS.gene91547:CDS
TTGACTGCATATGTTGCTAA+AGG	0.622390	1.2:+60641607	MS.gene91547:CDS
AGGTGAAATAAGTGTACTGA+AGG	0.625603	1.2:+60640694	MS.gene91547:CDS
GTTGCAAGTTGTGGGACTGA+AGG	0.629045	1.2:+60641114	MS.gene91547:CDS
CAACAGTAAGAAGTTTGATG+AGG	0.631997	1.2:+60640835	MS.gene91547:CDS
TGACGAGGCAACAAATAAGG+TGG	0.639359	1.2:+60641081	MS.gene91547:CDS
ACTCTCTTTGAGCTGCAATG+AGG	0.642172	1.2:-60641267	None:intergenic
TGCTGAAGCTGAGTTGGTCA+AGG	0.646705	1.2:+60641150	MS.gene91547:CDS
GGCGAGAAGAGCTAGAGATG+AGG	0.648893	1.2:+60640625	MS.gene91547:CDS
CGTTAATCAAAACATCTATG+CGG	0.652889	1.2:-60641222	None:intergenic
CATCATGAAAAGATATGACG+AGG	0.665707	1.2:+60641066	MS.gene91547:CDS
ACATGCTTCTTCTCACCGCG+AGG	0.668840	1.2:-60641400	None:intergenic
TCGCGGTGAGAAGAAGCATG+TGG	0.678181	1.2:+60641402	MS.gene91547:CDS
GAAGATGAATGAGACAAACA+AGG	0.682202	1.2:+60641189	MS.gene91547:CDS
ATTGGAGAATAGGCAGCGTG+AGG	0.687102	1.2:+60640595	MS.gene91547:CDS
GGTGAAATAAGTGTACTGAA+GGG	0.705436	1.2:+60640695	MS.gene91547:CDS
ACATGTGTCTAAGGAAAGTG+TGG	0.709564	1.2:+60641369	MS.gene91547:CDS
AGTGTGGAAGTGATTCCTCG+CGG	0.788854	1.2:+60641385	MS.gene91547:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATCAATTCAAAGCAAACTT+TGG	+	chr1.2:60641324-60641343	MS.gene91547:CDS	25.0%
!	TGATGAAAAGAAAAACAAAG+TGG	+	chr1.2:60640997-60641016	MS.gene91547:CDS	25.0%
!!!	AGATGTTTTGATTAACGAAA+AGG	+	chr1.2:60641228-60641247	MS.gene91547:CDS	25.0%
	AACAAATAAGGTGGAGAATT+TGG	+	chr1.2:60641090-60641109	MS.gene91547:CDS	30.0%
	ATGTTATAAGAATGCTGTTG+AGG	+	chr1.2:60640937-60640956	MS.gene91547:CDS	30.0%
	CGTTAATCAAAACATCTATG+CGG	-	chr1.2:60641225-60641244	None:intergenic	30.0%
	TGAAAAGAAAAACAAAGTGG+AGG	+	chr1.2:60641000-60641019	MS.gene91547:CDS	30.0%
	TGTCTCAGGTTAATCATTAT+AGG	+	chr1.2:60640777-60640796	MS.gene91547:CDS	30.0%
	TTAAGAGAGAATTGGAGAAT+AGG	+	chr1.2:60640585-60640604	MS.gene91547:CDS	30.0%
	AAAATTGTAGCTAGAGAGTC+TGG	+	chr1.2:60640734-60640753	MS.gene91547:CDS	35.0%
	AGGTGAAATAAGTGTACTGA+AGG	+	chr1.2:60640694-60640713	MS.gene91547:CDS	35.0%
	ATATGACGAGGCAACAAATA+AGG	+	chr1.2:60641078-60641097	MS.gene91547:CDS	35.0%
	CAACAGTAAGAAGTTTGATG+AGG	+	chr1.2:60640835-60640854	MS.gene91547:CDS	35.0%
	CACATAAAGGTAAGAACTTG+TGG	+	chr1.2:60641545-60641564	MS.gene91547:CDS	35.0%
	CATCATGAAAAGATATGACG+AGG	+	chr1.2:60641066-60641085	MS.gene91547:CDS	35.0%
	GAAAAACAAAGTGGAGGATT+TGG	+	chr1.2:60641006-60641025	MS.gene91547:CDS	35.0%
	GAAGATGAATGAGACAAACA+AGG	+	chr1.2:60641189-60641208	MS.gene91547:CDS	35.0%
	GGTGAAATAAGTGTACTGAA+GGG	+	chr1.2:60640695-60640714	MS.gene91547:CDS	35.0%
	TACTGAATTGAAGCTTAAGC+AGG	+	chr1.2:60641039-60641058	MS.gene91547:CDS	35.0%
	TGATGAGGAGAAAAAGAAAG+TGG	+	chr1.2:60640850-60640869	MS.gene91547:CDS	35.0%
	TTGACTGCATATGTTGCTAA+AGG	+	chr1.2:60641607-60641626	MS.gene91547:CDS	35.0%
!	AATGAAGTCGTTAAGTTGCA+AGG	+	chr1.2:60640674-60640693	MS.gene91547:CDS	35.0%
!	AATTTGGAGTTGCAAGTTGT+GGG	+	chr1.2:60641106-60641125	MS.gene91547:CDS	35.0%
!	CTCGTCATATCTTTTCATGA+TGG	-	chr1.2:60641068-60641087	None:intergenic	35.0%
!!	AAACAATGGATTACTGTCTC+AGG	+	chr1.2:60640763-60640782	MS.gene91547:CDS	35.0%
!!	CAAGAAAGCATTCAAAGCTA+AGG	+	chr1.2:60641462-60641481	MS.gene91547:CDS	35.0%
	AAACAAAGTGGAGGATTTGG+AGG	+	chr1.2:60641009-60641028	MS.gene91547:CDS	40.0%
	AAAGGTAAGAACTTGTGGAC+CGG	+	chr1.2:60641550-60641569	MS.gene91547:CDS	40.0%
	AATGAGACAAACAAGGAGCT+AGG	+	chr1.2:60641196-60641215	MS.gene91547:CDS	40.0%
	ACATGTGTCTAAGGAAAGTG+TGG	+	chr1.2:60641369-60641388	MS.gene91547:CDS	40.0%
	ATTCAAAGCTAAGGATGAGC+TGG	+	chr1.2:60641471-60641490	MS.gene91547:CDS	40.0%
	GAATTTGCAGTCACAAGTTG+TGG	+	chr1.2:60640874-60640893	MS.gene91547:CDS	40.0%
	GAGGTTGAGAAGGTTAAAGT+TGG	+	chr1.2:60640644-60640663	MS.gene91547:CDS	40.0%
	GAGTCTGGAGAGAAAAACAA+TGG	+	chr1.2:60640749-60640768	MS.gene91547:CDS	40.0%
	TAAGAATGCTGTTGAGGAAG+TGG	+	chr1.2:60640943-60640962	MS.gene91547:CDS	40.0%
!	GAATTTGGAGTTGCAAGTTG+TGG	+	chr1.2:60641105-60641124	MS.gene91547:CDS	40.0%
!	GTCTTTTGCTGAAGAACTTG+AGG	+	chr1.2:60641435-60641454	MS.gene91547:CDS	40.0%
	ACTCTCTTTGAGCTGCAATG+AGG	-	chr1.2:60641270-60641289	None:intergenic	45.0%
	AGCACAAATAGTAGCAGCAG+AGG	-	chr1.2:60641581-60641600	None:intergenic	45.0%
	AGCTAGAGATGAGGTTGAGA+AGG	+	chr1.2:60640634-60640653	MS.gene91547:CDS	45.0%
	AGTAGCAGCAGAGGTTAAAC+CGG	-	chr1.2:60641572-60641591	None:intergenic	45.0%
	CACTGTTGCACATGTGTCTA+AGG	+	chr1.2:60641360-60641379	MS.gene91547:CDS	45.0%
	GAGAGGGATAACGTCAGAAA+GGG	+	chr1.2:60640971-60640990	MS.gene91547:CDS	45.0%
	GCAGTCACAAGTTGTGGAAA+TGG	+	chr1.2:60640880-60640899	MS.gene91547:CDS	45.0%
	GTCACAAGTTGTGGAAATGG+AGG	+	chr1.2:60640883-60640902	MS.gene91547:CDS	45.0%
	TCTGCGTCTGATGCACATAA+AGG	+	chr1.2:60641532-60641551	MS.gene91547:CDS	45.0%
	TGACGAGGCAACAAATAAGG+TGG	+	chr1.2:60641081-60641100	MS.gene91547:CDS	45.0%
	TGAGAATGCTGAAGCTGAGT+TGG	+	chr1.2:60641144-60641163	MS.gene91547:CDS	45.0%
	TGAGAGGGATAACGTCAGAA+AGG	+	chr1.2:60640970-60640989	MS.gene91547:CDS	45.0%
!!	TGTACTGAAGGGTGTTGTAG+AGG	+	chr1.2:60640706-60640725	MS.gene91547:CDS	45.0%
	AGTGTGGAAGTGATTCCTCG+CGG	+	chr1.2:60641385-60641404	MS.gene91547:CDS	50.0%
	ATTGGAGAATAGGCAGCGTG+AGG	+	chr1.2:60640595-60640614	MS.gene91547:CDS	50.0%
	CAAAGCTAAGGATGAGCTGG+TGG	+	chr1.2:60641474-60641493	MS.gene91547:CDS	50.0%
	GTTGCAAGTTGTGGGACTGA+AGG	+	chr1.2:60641114-60641133	MS.gene91547:CDS	50.0%
	TGAGGAAGTGGAGCTTGAGA+GGG	+	chr1.2:60640955-60640974	MS.gene91547:CDS	50.0%
	TTGAGGAAGTGGAGCTTGAG+AGG	+	chr1.2:60640954-60640973	MS.gene91547:CDS	50.0%
!	TGCAGCTCAAAGAGAGTGCA+AGG	+	chr1.2:60641273-60641292	MS.gene91547:CDS	50.0%
!!	TGAAGGGTGTTGTAGAGGAG+TGG	+	chr1.2:60640711-60640730	MS.gene91547:CDS	50.0%
!!	TGCTGAAGCTGAGTTGGTCA+AGG	+	chr1.2:60641150-60641169	MS.gene91547:CDS	50.0%
	ACATGCTTCTTCTCACCGCG+AGG	-	chr1.2:60641403-60641422	None:intergenic	55.0%
	GGCGAGAAGAGCTAGAGATG+AGG	+	chr1.2:60640625-60640644	MS.gene91547:CDS	55.0%
!	TCGCGGTGAGAAGAAGCATG+TGG	+	chr1.2:60641402-60641421	MS.gene91547:CDS	55.0%
!!	TAGGCAGCGTGAGGTTGATG+AGG	+	chr1.2:60640604-60640623	MS.gene91547:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	60640581	60641636	60640581	ID=MS.gene91547
chr1.2	mRNA	60640581	60641636	60640581	ID=MS.gene91547.t1;Parent=MS.gene91547
chr1.2	exon	60640581	60641636	60640581	ID=MS.gene91547.t1.exon1;Parent=MS.gene91547.t1
chr1.2	CDS	60640581	60641636	60640581	ID=cds.MS.gene91547.t1;Parent=MS.gene91547.t1

Gene Sequence

>MS.gene91547

ATGGTTAAGAGAGAATTGGAGAATAGGCAGCGTGAGGTTGATGAGGCGAGAAGAGCTAGAGATGAGGTTGAGAAGGTTAAAGTTGGCTATGAGAATGAAGTCGTTAAGTTGCAAGGTGAAATAAGTGTACTGAAGGGTGTTGTAGAGGAGTGGAAAATTGTAGCTAGAGAGTCTGGAGAGAAAAACAATGGATTACTGTCTCAGGTTAATCATTATAGGAATGTTATTGATGAAGTGAAGTCTATGAATGAGCTCAACAGTAAGAAGTTTGATGAGGAGAAAAAGAAAGTGGAGAATTTGCAGTCACAAGTTGTGGAAATGGAGGAAAAAATTGAGCTATTACTCTCTCAAGTTCAATGTTATAAGAATGCTGTTGAGGAAGTGGAGCTTGAGAGGGATAACGTCAGAAAGGGATATGATGAAAAGAAAAACAAAGTGGAGGATTTGGAGGCACATGTTACTGAATTGAAGCTTAAGCAGGATACCATCATGAAAAGATATGACGAGGCAACAAATAAGGTGGAGAATTTGGAGTTGCAAGTTGTGGGACTGAAGGAAAAAATTGAGAATGCTGAAGCTGAGTTGGTCAAGGTGAGTAGCGAGAAAGAGAAGATGAATGAGACAAACAAGGAGCTAGGAAGCCGCATAGATGTTTTGATTAACGAAAAGGATGCTACACATAGTAGCCTCATTGCAGCTCAAAGAGAGTGCAAGGATTTGAGAGCTAAGTTTGAGTCTTCTAGAATCAATTCAAAGCAAACTTTGGAATTGTTGAAGAGCACTGTTGCACATGTGTCTAAGGAAAGTGTGGAAGTGATTCCTCGCGGTGAGAAGAAGCATGTGGAAGAAATTCAGTCTTTTGCTGAAGAACTTGAGGCAATCAAGAAAGCATTCAAAGCTAAGGATGAGCTGGTGGATGATATGAAGAAACAAGTTGTATCACTGCAGAAATCTGCGTCTGATGCACATAAAGGTAAGAACTTGTGGACCGGTTTAACCTCTGCTGCTACTATTTGTGCTTTTGCGTTGACTGCATATGTTGCTAAAGGACGTTGA

Protein sequence

>MS.gene91547.t1

MVKRELENRQREVDEARRARDEVEKVKVGYENEVVKLQGEISVLKGVVEEWKIVARESGEKNNGLLSQVNHYRNVIDEVKSMNELNSKKFDEEKKKVENLQSQVVEMEEKIELLLSQVQCYKNAVEEVELERDNVRKGYDEKKNKVEDLEAHVTELKLKQDTIMKRYDEATNKVENLELQVVGLKEKIENAEAELVKVSSEKEKMNETNKELGSRIDVLINEKDATHSSLIAAQRECKDLRAKFESSRINSKQTLELLKSTVAHVSKESVEVIPRGEKKHVEEIQSFAEELEAIKKAFKAKDELVDDMKKQVVSLQKSASDAHKGKNLWTGLTSAATICAFALTAYVAKGR