Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005908.t1 | XP_024641064.1 | 97.1 | 343 | 10 | 0 | 1 | 343 | 1 | 343 | 2.50E-194 | 688 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005908.t1 | Q54P70 | 28.7 | 195 | 116 | 5 | 165 | 341 | 575 | 764 | 1.0e-10 | 69.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005908.t1 | G7I502 | 97.1 | 343 | 10 | 0 | 1 | 343 | 1 | 343 | 1.8e-194 | 688.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064483 | MS.gene005908 | PPI |
MS.gene051473 | MS.gene005908 | PPI |
MS.gene005908 | MS.gene029809 | PPI |
MS.gene055898 | MS.gene005908 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005908.t1 | MTR_1g094650 | 97.085 | 343 | 10 | 0 | 1 | 343 | 1 | 343 | 0.0 | 696 |
MS.gene005908.t1 | MTR_1g063900 | 49.708 | 342 | 133 | 6 | 10 | 343 | 8 | 318 | 4.04e-101 | 303 |
MS.gene005908.t1 | MTR_6g033065 | 56.989 | 186 | 79 | 1 | 156 | 340 | 27 | 212 | 2.59e-74 | 230 |
MS.gene005908.t1 | MTR_1g063900 | 45.918 | 294 | 120 | 6 | 10 | 295 | 8 | 270 | 1.55e-71 | 225 |
MS.gene005908.t1 | MTR_3g081150 | 56.213 | 169 | 74 | 0 | 175 | 343 | 47 | 215 | 8.09e-68 | 214 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005908.t1 | AT5G04250 | 51.884 | 345 | 148 | 5 | 4 | 345 | 2 | 331 | 5.18e-109 | 323 |
MS.gene005908.t1 | AT5G04250 | 51.884 | 345 | 148 | 5 | 4 | 345 | 2 | 331 | 5.18e-109 | 323 |
MS.gene005908.t1 | AT5G03330 | 53.310 | 287 | 123 | 4 | 54 | 340 | 60 | 335 | 2.84e-88 | 271 |
MS.gene005908.t1 | AT5G03330 | 53.310 | 287 | 123 | 4 | 54 | 340 | 60 | 335 | 2.84e-88 | 271 |
MS.gene005908.t1 | AT5G03330 | 50.903 | 277 | 125 | 4 | 54 | 330 | 60 | 325 | 2.40e-76 | 240 |
MS.gene005908.t1 | AT5G03330 | 50.903 | 277 | 125 | 4 | 54 | 330 | 60 | 325 | 2.40e-76 | 240 |
MS.gene005908.t1 | AT3G02070 | 59.016 | 183 | 75 | 0 | 158 | 340 | 19 | 201 | 7.55e-75 | 231 |
MS.gene005908.t1 | AT3G02070 | 59.016 | 183 | 75 | 0 | 158 | 340 | 19 | 201 | 7.55e-75 | 231 |
MS.gene005908.t1 | AT3G22260 | 53.005 | 183 | 84 | 1 | 166 | 346 | 47 | 229 | 4.70e-65 | 207 |
MS.gene005908.t1 | AT3G22260 | 53.005 | 183 | 84 | 1 | 166 | 346 | 47 | 229 | 4.70e-65 | 207 |
MS.gene005908.t1 | AT3G22260 | 53.005 | 183 | 84 | 1 | 166 | 346 | 47 | 229 | 4.70e-65 | 207 |
MS.gene005908.t1 | AT3G22260 | 53.005 | 183 | 84 | 1 | 166 | 346 | 47 | 229 | 4.70e-65 | 207 |
MS.gene005908.t1 | AT3G22260 | 53.005 | 183 | 84 | 1 | 166 | 346 | 47 | 229 | 4.70e-65 | 207 |
MS.gene005908.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.35e-63 | 203 |
MS.gene005908.t1 | AT2G39320 | 40.984 | 122 | 52 | 2 | 223 | 343 | 2 | 104 | 1.70e-23 | 96.7 |
Find 84 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGTAATATTTCTGAGCTTT+TGG | 0.231658 | 1.2:+73829435 | MS.gene005908:intron |
CTTGATTCCATGGAATCTTC+TGG | 0.245382 | 1.2:+73824204 | MS.gene005908:CDS |
GAGCATGAAGTTGGAGTATT+TGG | 0.256310 | 1.2:+73824494 | MS.gene005908:CDS |
CATGATGACATCACATGATA+TGG | 0.308680 | 1.2:+73823987 | None:intergenic |
ATATGAACTGATTGAGTCTA+AGG | 0.313550 | 1.2:+73826890 | MS.gene005908:CDS |
GAGTATTTGGTTCGTCTTCT+AGG | 0.317804 | 1.2:+73824507 | MS.gene005908:CDS |
ATGACTCATCTACGGGATTC+TGG | 0.332360 | 1.2:-73824421 | None:intergenic |
CGTACAAATTTGTGGAGGTT+TGG | 0.367169 | 1.2:-73827854 | None:intergenic |
ACCTGTCTAGCAGCCTTTGA+TGG | 0.372482 | 1.2:-73825104 | None:intergenic |
GGGCGATCATGTCACGTTGC+AGG | 0.384197 | 1.2:+73828176 | MS.gene005908:CDS |
CTATGCTGGTTATGTTCCTA+TGG | 0.389215 | 1.2:+73828008 | MS.gene005908:CDS |
GAAGTTACACTTACAGGAAT+AGG | 0.398508 | 1.2:-73824635 | None:intergenic |
ATTTGTGATTACATCTTTCA+AGG | 0.399824 | 1.2:+73829116 | MS.gene005908:CDS |
ATAAATATGTTACCTCCTTC+CGG | 0.400065 | 1.2:-73829485 | None:intergenic |
AATCCTCCGCTTCTTTCATA+TGG | 0.401116 | 1.2:-73824445 | None:intergenic |
TGATGAAATGTGGCGTTCAT+TGG | 0.411463 | 1.2:+73824553 | MS.gene005908:CDS |
TGATCAAATCTTACTTCTTG+TGG | 0.413550 | 1.2:-73829178 | None:intergenic |
TTGATTCCATGGAATCTTCT+GGG | 0.418354 | 1.2:+73824205 | MS.gene005908:CDS |
ACATAACCAGCATAGAGATC+TGG | 0.421382 | 1.2:-73828000 | None:intergenic |
GTTGCAGGCTGCTGCAGATT+GGG | 0.423487 | 1.2:+73828191 | MS.gene005908:CDS |
CGTTGCAGGCTGCTGCAGAT+TGG | 0.424955 | 1.2:+73828190 | MS.gene005908:CDS |
ACCATCAAAGGCTGCTAGAC+AGG | 0.427425 | 1.2:+73825103 | MS.gene005908:CDS |
TTTGGTTCGTCTTCTAGGTC+AGG | 0.429238 | 1.2:+73824512 | MS.gene005908:CDS |
GTGGCGTTCATTGGAAATAT+CGG | 0.434139 | 1.2:+73824562 | MS.gene005908:CDS |
GAAAATGATGAGCATGAAGT+TGG | 0.445523 | 1.2:+73824485 | MS.gene005908:CDS |
TGCGACTATGCACTCTTAAG+AGG | 0.446381 | 1.2:+73829790 | MS.gene005908:CDS |
TCGGACGAGTCTTCTCTTGA+TGG | 0.446395 | 1.2:+73824581 | MS.gene005908:CDS |
ACGGGAACAAGTTGTTCAAC+AGG | 0.449520 | 1.2:+73827874 | MS.gene005908:CDS |
TCAAACAGGAGCTATAACTT+TGG | 0.457569 | 1.2:+73824291 | MS.gene005908:CDS |
GATCCCCTGGTGTCGTAACT+CGG | 0.467589 | 1.2:+73824070 | MS.gene005908:CDS |
GGATCCTGACGTTGTTCGAT+GGG | 0.467870 | 1.2:+73824008 | MS.gene005908:CDS |
GCATTACAACTCAATTTATC+CGG | 0.470926 | 1.2:+73829466 | MS.gene005908:CDS |
ATTATCACATCTTGATTCCA+TGG | 0.475855 | 1.2:+73824194 | MS.gene005908:CDS |
CTGATTGAGTCTAAGGTTGA+TGG | 0.477397 | 1.2:+73826897 | MS.gene005908:CDS |
AATATTTAAAGAAGATGAGC+AGG | 0.478327 | 1.2:+73828040 | MS.gene005908:CDS |
AATTTGTTAGGAGTGGTGAA+TGG | 0.479280 | 1.2:+73828154 | MS.gene005908:intron |
CACATTTCATCAGTAATGAT+AGG | 0.479848 | 1.2:-73824542 | None:intergenic |
ACTGGCTATCTTCTTCAAAC+AGG | 0.480173 | 1.2:+73824277 | MS.gene005908:CDS |
TAGTCAAGTTCAATATGTTA+CGG | 0.494793 | 1.2:+73824107 | MS.gene005908:CDS |
TAGCCAGTCCTGTGCATCTA+CGG | 0.494897 | 1.2:-73824262 | None:intergenic |
TGGATCCTGACGTTGTTCGA+TGG | 0.500356 | 1.2:+73824007 | MS.gene005908:CDS |
AGGCCCCATCGAACAACGTC+AGG | 0.501197 | 1.2:-73824012 | None:intergenic |
CTTGTTCCCGTACAAATTTG+TGG | 0.501678 | 1.2:-73827862 | None:intergenic |
CATATGGTATGACTCATCTA+CGG | 0.505093 | 1.2:-73824429 | None:intergenic |
TCTTCTCTTGATGGTGAAGT+AGG | 0.505900 | 1.2:+73824590 | MS.gene005908:CDS |
TTTCCACATGGTCGATCCCC+TGG | 0.508416 | 1.2:+73824057 | MS.gene005908:CDS |
ATATGGTATGACTCATCTAC+GGG | 0.510485 | 1.2:-73824428 | None:intergenic |
TTACAGGAATAGGAACCATC+TGG | 0.510872 | 1.2:-73824625 | None:intergenic |
CATAACCAGCATAGAGATCT+GGG | 0.512866 | 1.2:-73827999 | None:intergenic |
AGGATTGTGGTCCAAGTGAA+AGG | 0.513940 | 1.2:+73824462 | MS.gene005908:CDS |
CAAACCTCCACAAATTTGTA+CGG | 0.514664 | 1.2:+73827855 | MS.gene005908:CDS |
ATTTGTTAGGAGTGGTGAAT+GGG | 0.523506 | 1.2:+73828155 | MS.gene005908:intron |
CATCCGTAGATGCACAGGAC+TGG | 0.527233 | 1.2:+73824259 | MS.gene005908:CDS |
CATCCTCCCAGAAGATTCCA+TGG | 0.533488 | 1.2:-73824211 | None:intergenic |
AAGAAGTATCAGACCATCAA+AGG | 0.544120 | 1.2:+73825091 | MS.gene005908:CDS |
TCCGACCCAGATCTCTATGC+TGG | 0.548139 | 1.2:+73827994 | MS.gene005908:CDS |
GATACTTCTTCGTTCTCAGA+TGG | 0.551344 | 1.2:-73825078 | None:intergenic |
AAATATTCACTATAAACCAT+AGG | 0.553433 | 1.2:-73828024 | None:intergenic |
CAAGTTCAATATGTTACGGA+AGG | 0.555014 | 1.2:+73824111 | MS.gene005908:CDS |
GCGAGCATCCGTAGATGCAC+AGG | 0.562509 | 1.2:+73824254 | MS.gene005908:CDS |
ATGAAAGAAGCGGAGGATTG+TGG | 0.568765 | 1.2:+73824449 | MS.gene005908:CDS |
TGATGGAGATGGTAACTGTC+AGG | 0.570584 | 1.2:+73826914 | MS.gene005908:CDS |
TACAACTCAATTTATCCGGA+AGG | 0.580859 | 1.2:+73829470 | MS.gene005908:CDS |
GGATTGTGGTCCAAGTGAAA+GGG | 0.581256 | 1.2:+73824463 | MS.gene005908:CDS |
GAGTCTAAGGTTGATGGAGA+TGG | 0.583074 | 1.2:+73826903 | MS.gene005908:CDS |
AAACCTCCACAAATTTGTAC+GGG | 0.584066 | 1.2:+73827856 | MS.gene005908:CDS |
AGGCAAAAGATTAAACCAGA+TGG | 0.599929 | 1.2:+73824610 | MS.gene005908:CDS |
TCACACCGAGTTACGACACC+AGG | 0.603061 | 1.2:-73824075 | None:intergenic |
AACTCAATTTATCCGGAAGG+AGG | 0.611887 | 1.2:+73829473 | MS.gene005908:CDS |
TGCAAACATCTAGAAGATGT+AGG | 0.621131 | 1.2:-73824032 | None:intergenic |
CTTGTGGACTTCTGTATCTG+CGG | 0.625166 | 1.2:-73829162 | None:intergenic |
TTTGTTAGGAGTGGTGAATG+GGG | 0.625472 | 1.2:+73828156 | MS.gene005908:intron |
GTCATACCATATGAAAGAAG+CGG | 0.641922 | 1.2:+73824439 | MS.gene005908:CDS |
ACCAGCATAGAGATCTGGGT+CGG | 0.658906 | 1.2:-73827995 | None:intergenic |
ATACCATATGAAAGAAGCGG+AGG | 0.659464 | 1.2:+73824442 | MS.gene005908:CDS |
TTCAAATGTTGAACATGACG+AGG | 0.665749 | 1.2:+73824146 | MS.gene005908:CDS |
GATGTTTGCACATTTCCACA+TGG | 0.675781 | 1.2:+73824045 | MS.gene005908:CDS |
GTTCCCGTACAAATTTGTGG+AGG | 0.677176 | 1.2:-73827859 | None:intergenic |
ACACCAGGGGATCGACCATG+TGG | 0.680011 | 1.2:-73824060 | None:intergenic |
GATCCTGACGTTGTTCGATG+GGG | 0.691921 | 1.2:+73824009 | MS.gene005908:CDS |
CTATCATTACTGATGAAATG+TGG | 0.702769 | 1.2:+73824543 | MS.gene005908:CDS |
ATTCCATGGAATCTTCTGGG+AGG | 0.705324 | 1.2:+73824208 | MS.gene005908:CDS |
CACACCGAGTTACGACACCA+GGG | 0.709258 | 1.2:-73824074 | None:intergenic |
ACACCGAGTTACGACACCAG+GGG | 0.746885 | 1.2:-73824073 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATAATAAAAGCTT+CGG | + | chr1.2:73826041-73826060 | MS.gene005908:intron | 10.0% |
!! | AAAAATTATTTGTCTTTAAA+TGG | + | chr1.2:73828856-73828875 | MS.gene005908:intron | 10.0% |
!! | AAAACATTCATAAATTTATT+GGG | + | chr1.2:73827016-73827035 | MS.gene005908:intron | 10.0% |
!! | ACTACTAATTAATAATTATT+TGG | - | chr1.2:73826147-73826166 | None:intergenic | 10.0% |
!! | ATTAATTAAAATTGATGTAT+AGG | - | chr1.2:73828348-73828367 | None:intergenic | 10.0% |
!! | GCAAAAAAAAAAAAAAAAAA+AGG | - | chr1.2:73824792-73824811 | None:intergenic | 10.0% |
!! | TAAAACATTCATAAATTTAT+TGG | + | chr1.2:73827015-73827034 | MS.gene005908:intron | 10.0% |
!! | TAAATTCTTTAATTATGTAT+AGG | + | chr1.2:73828933-73828952 | MS.gene005908:intron | 10.0% |
!! | TAATAATTATTTGGTATAAT+AGG | - | chr1.2:73826138-73826157 | None:intergenic | 10.0% |
!! | TTATTAATTAGTAGTTATAT+TGG | + | chr1.2:73826152-73826171 | MS.gene005908:intron | 10.0% |
!!! | ATCAATTTTAATTAATCAAA+TGG | + | chr1.2:73828352-73828371 | MS.gene005908:intron | 10.0% |
!! | AAACAGAAGAAAATTATAAT+AGG | - | chr1.2:73828249-73828268 | None:intergenic | 15.0% |
!! | ATGAAAAAGATTTAATAAGA+TGG | + | chr1.2:73826714-73826733 | MS.gene005908:intron | 15.0% |
!! | ATTGGTATTATAATCTTTAT+TGG | + | chr1.2:73828830-73828849 | MS.gene005908:intron | 15.0% |
!! | GTAGAAAAAAATATAAAAAG+AGG | - | chr1.2:73826766-73826785 | None:intergenic | 15.0% |
!! | TTAATTATGTATAGGAATTA+AGG | + | chr1.2:73828941-73828960 | MS.gene005908:intron | 15.0% |
!!! | AATTTATGAATGTTTTAACA+AGG | - | chr1.2:73827012-73827031 | None:intergenic | 15.0% |
!!! | ATTATATTTTTTACGAAAAC+AGG | - | chr1.2:73826033-73826052 | None:intergenic | 15.0% |
!!! | ATTTTATTTTTTATGTCTGT+TGG | + | chr1.2:73825135-73825154 | MS.gene005908:intron | 15.0% |
!!! | ATTTTTTAGCATTATTAACT+TGG | + | chr1.2:73827718-73827737 | MS.gene005908:intron | 15.0% |
!!! | CAAATTCATAATTTTCTTAA+AGG | - | chr1.2:73825341-73825360 | None:intergenic | 15.0% |
!!! | GATTTCTATATATATTGTTT+TGG | - | chr1.2:73826519-73826538 | None:intergenic | 15.0% |
!!! | TAATTGTTATTAGGAAAATT+GGG | - | chr1.2:73828584-73828603 | None:intergenic | 15.0% |
!!! | TTAATTGTTATTAGGAAAAT+TGG | - | chr1.2:73828585-73828604 | None:intergenic | 15.0% |
!!! | TTCTATCATAAACTAAATTT+TGG | - | chr1.2:73828447-73828466 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTTTTGCTTC+TGG | + | chr1.2:73824795-73824814 | MS.gene005908:intron | 15.0% |
!! | AAAAAAAAAAACATGTTTGC+TGG | - | chr1.2:73826072-73826091 | None:intergenic | 20.0% |
!! | AAAAAAAAAACATGTTTGCT+GGG | - | chr1.2:73826071-73826090 | None:intergenic | 20.0% |
!! | AAAAAAAAGCAACAAAGAAA+AGG | + | chr1.2:73825534-73825553 | MS.gene005908:intron | 20.0% |
!! | AAATATTCACTATAAACCAT+AGG | - | chr1.2:73828027-73828046 | None:intergenic | 20.0% |
!! | AAGTTATTGAGAAACTAATT+TGG | - | chr1.2:73825783-73825802 | None:intergenic | 20.0% |
!! | AATTGAATCATAAACTACTT+TGG | - | chr1.2:73829564-73829583 | None:intergenic | 20.0% |
!! | ATTAAGAAACTAACTCATTA+AGG | - | chr1.2:73825810-73825829 | None:intergenic | 20.0% |
!! | CACTCAAATTAAAATTTGAT+AGG | - | chr1.2:73829325-73829344 | None:intergenic | 20.0% |
!! | GAATCAATACATATGATTAA+AGG | - | chr1.2:73827944-73827963 | None:intergenic | 20.0% |
!! | GTATTTAATTAACTTCTTCT+AGG | - | chr1.2:73825173-73825192 | None:intergenic | 20.0% |
!! | TACATATGAATTTCTGAATT+TGG | + | chr1.2:73826381-73826400 | MS.gene005908:intron | 20.0% |
!! | TCATAACATTTGTAGAAAAA+AGG | - | chr1.2:73827535-73827554 | None:intergenic | 20.0% |
!! | TGTTATGAATCTTATGATAT+AGG | + | chr1.2:73827547-73827566 | MS.gene005908:intron | 20.0% |
!! | TTTAAACCTATGATATATCA+AGG | - | chr1.2:73828808-73828827 | None:intergenic | 20.0% |
!! | TTTAATCCTTGATATATCAT+AGG | + | chr1.2:73828799-73828818 | MS.gene005908:intron | 20.0% |
!!! | AATTGTTATTAGGAAAATTG+GGG | - | chr1.2:73828583-73828602 | None:intergenic | 20.0% |
!!! | ATCAAATTTTAATTTGAGTG+TGG | + | chr1.2:73829325-73829344 | MS.gene005908:intron | 20.0% |
!!! | ATTCATAATTTTCTTAAACG+AGG | - | chr1.2:73825338-73825357 | None:intergenic | 20.0% |
!!! | GTATGTTTTTGTTGATTTTA+GGG | - | chr1.2:73825059-73825078 | None:intergenic | 20.0% |
!!! | GTATTATAGTTATTTTAGAG+AGG | + | chr1.2:73825367-73825386 | MS.gene005908:intron | 20.0% |
!!! | TGGTCAACTTATATATTTTT+TGG | - | chr1.2:73827421-73827440 | None:intergenic | 20.0% |
!!! | TTCATAATTTTCTTAAACGA+GGG | - | chr1.2:73825337-73825356 | None:intergenic | 20.0% |
! | AAAGAGATCATCTTATTAGT+TGG | - | chr1.2:73826591-73826610 | None:intergenic | 25.0% |
! | AAATGAAAACTGTACTAGAT+AGG | - | chr1.2:73825686-73825705 | None:intergenic | 25.0% |
! | AAGAGATCATCTTATTAGTT+GGG | - | chr1.2:73826590-73826609 | None:intergenic | 25.0% |
! | AATATTACTGCATAAATCAC+AGG | - | chr1.2:73829425-73829444 | None:intergenic | 25.0% |
! | AATATTTAAAGAAGATGAGC+AGG | + | chr1.2:73828040-73828059 | MS.gene005908:CDS | 25.0% |
! | ACAAAATATTGTCTGTTACA+AGG | - | chr1.2:73825261-73825280 | None:intergenic | 25.0% |
! | ACACCTAAAAACAACTATAT+TGG | - | chr1.2:73826264-73826283 | None:intergenic | 25.0% |
! | AGTACATGTAAATGTGAATA+TGG | + | chr1.2:73829241-73829260 | MS.gene005908:intron | 25.0% |
! | AGTTTATGATAGAACATCAT+TGG | + | chr1.2:73828453-73828472 | MS.gene005908:intron | 25.0% |
! | ATAAGTAAATATCATGTCAC+CGG | - | chr1.2:73828904-73828923 | None:intergenic | 25.0% |
! | ATATACAAAAATACAGCCAA+TGG | + | chr1.2:73829630-73829649 | MS.gene005908:intron | 25.0% |
! | ATATCATAGGTTTAAACGAT+TGG | + | chr1.2:73828812-73828831 | MS.gene005908:intron | 25.0% |
! | ATATTGGTGTATCACTATAT+TGG | - | chr1.2:73826248-73826267 | None:intergenic | 25.0% |
! | ATTTACTTGAATGACTGATA+TGG | + | chr1.2:73829058-73829077 | MS.gene005908:intron | 25.0% |
! | ATTTGCGACAATTAACTATT+TGG | - | chr1.2:73828750-73828769 | None:intergenic | 25.0% |
! | ATTTGTGATTACATCTTTCA+AGG | + | chr1.2:73829116-73829135 | MS.gene005908:CDS | 25.0% |
! | GAAGAAAATTATAATAGGCA+AGG | - | chr1.2:73828244-73828263 | None:intergenic | 25.0% |
! | GACTTTAAATAAAGCCATAT+TGG | - | chr1.2:73828105-73828124 | None:intergenic | 25.0% |
! | GGAAGAAAAAAAAAACCAAA+TGG | - | chr1.2:73825240-73825259 | None:intergenic | 25.0% |
! | GTGATATATAATCAACATGT+AGG | + | chr1.2:73824386-73824405 | MS.gene005908:intron | 25.0% |
! | TAAAATTGATGTATAGGAGT+TGG | - | chr1.2:73828342-73828361 | None:intergenic | 25.0% |
! | TAGACCTTGAAAAACTATAA+GGG | + | chr1.2:73828383-73828402 | MS.gene005908:intron | 25.0% |
! | TAGTCAAGTTCAATATGTTA+CGG | + | chr1.2:73824107-73824126 | MS.gene005908:CDS | 25.0% |
! | TATGAATTTCTGAATTTGGT+AGG | + | chr1.2:73826385-73826404 | MS.gene005908:intron | 25.0% |
! | TATTGGTGTATCACTATATT+GGG | - | chr1.2:73826247-73826266 | None:intergenic | 25.0% |
! | TCTCAAAGAGAAGTTAAAAT+GGG | + | chr1.2:73825482-73825501 | MS.gene005908:intron | 25.0% |
! | TTAAAATAAACTCTGACACT+TGG | - | chr1.2:73828317-73828336 | None:intergenic | 25.0% |
! | TTAAAATTTGATAGGTAAGC+AGG | - | chr1.2:73829317-73829336 | None:intergenic | 25.0% |
! | TTAGACCTTGAAAAACTATA+AGG | + | chr1.2:73828382-73828401 | MS.gene005908:intron | 25.0% |
! | TTATCAGAAGTAAATCCTTT+GGG | + | chr1.2:73827481-73827500 | MS.gene005908:intron | 25.0% |
! | TTATGTTTCTTATGCCAATA+TGG | + | chr1.2:73828088-73828107 | MS.gene005908:intron | 25.0% |
! | TTATTTGCACATCCAATTTA+AGG | + | chr1.2:73829582-73829601 | MS.gene005908:intron | 25.0% |
! | TTCTCAAAGAGAAGTTAAAA+TGG | + | chr1.2:73825481-73825500 | MS.gene005908:intron | 25.0% |
! | TTTATCAGAAGTAAATCCTT+TGG | + | chr1.2:73827480-73827499 | MS.gene005908:intron | 25.0% |
! | TTTGTATATAGGAGATTTCA+TGG | - | chr1.2:73829619-73829638 | None:intergenic | 25.0% |
!! | AAAAAAAAACATGTTTGCTG+GGG | - | chr1.2:73826070-73826089 | None:intergenic | 25.0% |
!! | AAATATATAAGTTGACCACA+TGG | + | chr1.2:73827423-73827442 | MS.gene005908:intron | 25.0% |
!! | AATAATAAAGAGTGACTTGT+TGG | + | chr1.2:73827782-73827801 | MS.gene005908:intron | 25.0% |
!! | ACTAATAAGATGATCTCTTT+TGG | + | chr1.2:73826591-73826610 | MS.gene005908:intron | 25.0% |
!! | ATGTTATAACTTGTGAAAGT+AGG | + | chr1.2:73827059-73827078 | MS.gene005908:intron | 25.0% |
!! | GAGTTAGTTTCTTAATTACT+TGG | + | chr1.2:73825814-73825833 | MS.gene005908:intron | 25.0% |
!! | GCTTTATGTATGAATTTGTT+AGG | + | chr1.2:73828142-73828161 | MS.gene005908:intron | 25.0% |
!! | TCATAATTTTCTTAAACGAG+GGG | - | chr1.2:73825336-73825355 | None:intergenic | 25.0% |
!! | TCATAATTTTCTTAAAGGAG+AGG | - | chr1.2:73825424-73825443 | None:intergenic | 25.0% |
!!! | ACACCAATATAGTTGTTTTT+AGG | + | chr1.2:73826258-73826277 | MS.gene005908:intron | 25.0% |
!!! | ACTGCGTTTTAATTGTTATT+AGG | - | chr1.2:73828593-73828612 | None:intergenic | 25.0% |
!!! | AGTAATATTTCTGAGCTTTT+GGG | + | chr1.2:73829436-73829455 | MS.gene005908:intron | 25.0% |
!!! | AGTTTTTCAAGGTCTAAATA+TGG | - | chr1.2:73828379-73828398 | None:intergenic | 25.0% |
!!! | GGTATGTTTTTGTTGATTTT+AGG | - | chr1.2:73825060-73825079 | None:intergenic | 25.0% |
!!! | TAGTTATTTTCGTATGTAAG+AGG | + | chr1.2:73824345-73824364 | MS.gene005908:intron | 25.0% |
!!! | TTGGCTGTATTTTTGTATAT+AGG | - | chr1.2:73829630-73829649 | None:intergenic | 25.0% |
!!! | TTTTTATCTAGAGAAGTGTA+GGG | + | chr1.2:73825706-73825725 | MS.gene005908:intron | 25.0% |
!!! | TTTTTTATCTAGAGAAGTGT+AGG | + | chr1.2:73825705-73825724 | MS.gene005908:intron | 25.0% |
!!! | TTTTTTTTCTTTTCAAGCTG+TGG | - | chr1.2:73825520-73825539 | None:intergenic | 25.0% |
AAAGCTATCAGCAAAACATA+AGG | - | chr1.2:73828127-73828146 | None:intergenic | 30.0% | |
AAAGTAGGATTAAGAATGAG+GGG | + | chr1.2:73827074-73827093 | MS.gene005908:intron | 30.0% | |
AACTATAAGGGGAAACTATT+AGG | + | chr1.2:73828395-73828414 | MS.gene005908:intron | 30.0% | |
AACTTCTAAATACACCCATT+CGG | + | chr1.2:73826213-73826232 | MS.gene005908:intron | 30.0% | |
AATCATCTCTAGTATGTGAA+AGG | - | chr1.2:73825591-73825610 | None:intergenic | 30.0% | |
AATGGGAATGAATATGCTAT+TGG | - | chr1.2:73827236-73827255 | None:intergenic | 30.0% | |
AATTATTGCTTAGTCGTGTA+TGG | - | chr1.2:73826187-73826206 | None:intergenic | 30.0% | |
AATTTGTGCCTTTCATTAGA+AGG | + | chr1.2:73825734-73825753 | MS.gene005908:intron | 30.0% | |
AGACCTTGAAAAACTATAAG+GGG | + | chr1.2:73828384-73828403 | MS.gene005908:intron | 30.0% | |
ATAAATATGTTACCTCCTTC+CGG | - | chr1.2:73829488-73829507 | None:intergenic | 30.0% | |
ATATGAACTGATTGAGTCTA+AGG | + | chr1.2:73826890-73826909 | MS.gene005908:CDS | 30.0% | |
ATCAGTCATTCAAGTAAATG+AGG | - | chr1.2:73829057-73829076 | None:intergenic | 30.0% | |
ATTATCACATCTTGATTCCA+TGG | + | chr1.2:73824194-73824213 | MS.gene005908:CDS | 30.0% | |
ATTATTGCTTAGTCGTGTAT+GGG | - | chr1.2:73826186-73826205 | None:intergenic | 30.0% | |
ATTGTCGCAAATAGTTCAAA+TGG | + | chr1.2:73828758-73828777 | MS.gene005908:intron | 30.0% | |
ATTTACATTGTTGTCTCTCT+TGG | - | chr1.2:73827326-73827345 | None:intergenic | 30.0% | |
CACATTTCATCAGTAATGAT+AGG | - | chr1.2:73824545-73824564 | None:intergenic | 30.0% | |
CTATCATTACTGATGAAATG+TGG | + | chr1.2:73824543-73824562 | MS.gene005908:CDS | 30.0% | |
CTCAAAGAGAAGTTAAAATG+GGG | + | chr1.2:73825483-73825502 | MS.gene005908:intron | 30.0% | |
CTCTTTATACTATGAACAGA+AGG | + | chr1.2:73827384-73827403 | MS.gene005908:intron | 30.0% | |
CTTCTTGACTTAGTTTCTAA+AGG | + | chr1.2:73826475-73826494 | MS.gene005908:intron | 30.0% | |
GAAAGTAGGATTAAGAATGA+GGG | + | chr1.2:73827073-73827092 | MS.gene005908:intron | 30.0% | |
GATTGTTCCCTTAAATCTTT+GGG | + | chr1.2:73825607-73825626 | MS.gene005908:intron | 30.0% | |
GCATTACAACTCAATTTATC+CGG | + | chr1.2:73829466-73829485 | MS.gene005908:CDS | 30.0% | |
TAAATGGAACTGCTGTAAAA+AGG | + | chr1.2:73828872-73828891 | MS.gene005908:intron | 30.0% | |
TAACTTTGGTACTAGAAACT+TGG | + | chr1.2:73824305-73824324 | MS.gene005908:intron | 30.0% | |
TAGTTAGTTACTTGAATCGT+GGG | + | chr1.2:73824846-73824865 | MS.gene005908:intron | 30.0% | |
TATCAGAAGTAAATCCTTTG+GGG | + | chr1.2:73827482-73827501 | MS.gene005908:intron | 30.0% | |
TATGCTATTAATGAACCATG+TGG | - | chr1.2:73827441-73827460 | None:intergenic | 30.0% | |
TCTTATTGCTAGATAACCAT+TGG | - | chr1.2:73829649-73829668 | None:intergenic | 30.0% | |
TGAAAGTAGGATTAAGAATG+AGG | + | chr1.2:73827072-73827091 | MS.gene005908:intron | 30.0% | |
TGATCAAATCTTACTTCTTG+TGG | - | chr1.2:73829181-73829200 | None:intergenic | 30.0% | |
TGATTGTTCCCTTAAATCTT+TGG | + | chr1.2:73825606-73825625 | MS.gene005908:intron | 30.0% | |
TGTAATTTGATCCATGTAGA+CGG | + | chr1.2:73828476-73828495 | MS.gene005908:intron | 30.0% | |
TGTACTAGATAGGATATAAG+AGG | - | chr1.2:73825676-73825695 | None:intergenic | 30.0% | |
TTCAAAAAGAATCCAGTCAA+AGG | - | chr1.2:73826665-73826684 | None:intergenic | 30.0% | |
! | ATATATGTCTGAAGTCTTCA+CGG | - | chr1.2:73827200-73827219 | None:intergenic | 30.0% |
! | GATGATTTTGCATAGAATTC+AGG | + | chr1.2:73824689-73824708 | MS.gene005908:intron | 30.0% |
! | TTTCCCCTTATAGTTTTTCA+AGG | - | chr1.2:73828390-73828409 | None:intergenic | 30.0% |
!! | ATGGAGAAGTCTTTTTAAAG+TGG | - | chr1.2:73825200-73825219 | None:intergenic | 30.0% |
!! | ATGTATGAATTTGTTAGGAG+TGG | + | chr1.2:73828147-73828166 | MS.gene005908:intron | 30.0% |
!! | CAATGATGTTTTTACCTGTT+TGG | + | chr1.2:73827910-73827929 | MS.gene005908:intron | 30.0% |
!! | CAGTAATATTTCTGAGCTTT+TGG | + | chr1.2:73829435-73829454 | MS.gene005908:intron | 30.0% |
!! | CATTGCAGTTTTATGTAACA+TGG | + | chr1.2:73829750-73829769 | MS.gene005908:intron | 30.0% |
!! | GAGCGTTTTAAACCTTAAAT+TGG | - | chr1.2:73829597-73829616 | None:intergenic | 30.0% |
!! | TTTTATCTAGAGAAGTGTAG+GGG | + | chr1.2:73825707-73825726 | MS.gene005908:intron | 30.0% |
!!! | ACTTAGCATTTTTCTGAAAC+AGG | - | chr1.2:73829390-73829409 | None:intergenic | 30.0% |
AAACCTCCACAAATTTGTAC+GGG | + | chr1.2:73827856-73827875 | MS.gene005908:CDS | 35.0% | |
AAAGAAGAGACATGAAGAAG+TGG | - | chr1.2:73824668-73824687 | None:intergenic | 35.0% | |
AAGTTGTTCAACAGGTTTGT+TGG | + | chr1.2:73827882-73827901 | MS.gene005908:intron | 35.0% | |
AATCTTCTCTATCCTTTGAC+TGG | + | chr1.2:73826650-73826669 | MS.gene005908:intron | 35.0% | |
AATTTCCATTATCGTGTGTC+TGG | - | chr1.2:73829527-73829546 | None:intergenic | 35.0% | |
ACCAAATGAATTCAAGAGCA+TGG | - | chr1.2:73829717-73829736 | None:intergenic | 35.0% | |
ACGCAGTCTTCAAAAAGAAT+TGG | + | chr1.2:73828606-73828625 | MS.gene005908:intron | 35.0% | |
ACTGCATAAATCACAGGTAA+AGG | - | chr1.2:73829419-73829438 | None:intergenic | 35.0% | |
ACTTCTAAATACACCCATTC+GGG | + | chr1.2:73826214-73826233 | MS.gene005908:intron | 35.0% | |
ACTTCTTCATGTCTCTTCTT+TGG | + | chr1.2:73824667-73824686 | MS.gene005908:intron | 35.0% | |
AGCAATAAGAACCAATGAGT+TGG | + | chr1.2:73829659-73829678 | MS.gene005908:intron | 35.0% | |
AGGCAAAAGATTAAACCAGA+TGG | + | chr1.2:73824610-73824629 | MS.gene005908:CDS | 35.0% | |
ATATGGTATGACTCATCTAC+GGG | - | chr1.2:73824431-73824450 | None:intergenic | 35.0% | |
CAAACCTCCACAAATTTGTA+CGG | + | chr1.2:73827855-73827874 | MS.gene005908:CDS | 35.0% | |
CAAGTTCAATATGTTACGGA+AGG | + | chr1.2:73824111-73824130 | MS.gene005908:CDS | 35.0% | |
CAATATTCTTCGACAGGAAT+GGG | - | chr1.2:73827253-73827272 | None:intergenic | 35.0% | |
CACGATTCAAGTAACTAACT+AGG | - | chr1.2:73824847-73824866 | None:intergenic | 35.0% | |
CATATGGTATGACTCATCTA+CGG | - | chr1.2:73824432-73824451 | None:intergenic | 35.0% | |
CTAGTTAGTTACTTGAATCG+TGG | + | chr1.2:73824845-73824864 | MS.gene005908:intron | 35.0% | |
CTTAAAGGAGAGGATATGAA+AGG | - | chr1.2:73825414-73825433 | None:intergenic | 35.0% | |
CTTCTGATAAACTCTCACTA+TGG | - | chr1.2:73827471-73827490 | None:intergenic | 35.0% | |
GAAAATGATGAGCATGAAGT+TGG | + | chr1.2:73824485-73824504 | MS.gene005908:CDS | 35.0% | |
GAAATGCAATATTCTTCGAC+AGG | - | chr1.2:73827259-73827278 | None:intergenic | 35.0% | |
GAAGATTACAATGACTTCCT+AGG | - | chr1.2:73826637-73826656 | None:intergenic | 35.0% | |
GAAGTTACACTTACAGGAAT+AGG | - | chr1.2:73824638-73824657 | None:intergenic | 35.0% | |
GAATCATAAAGAGCCAGATT+GGG | + | chr1.2:73826682-73826701 | MS.gene005908:intron | 35.0% | |
GACTAATAAAGCCAACTCAT+TGG | - | chr1.2:73829673-73829692 | None:intergenic | 35.0% | |
GGAAACTATTAGGAAAGACT+TGG | + | chr1.2:73828405-73828424 | MS.gene005908:intron | 35.0% | |
GGATATAAATGTAGCAACCA+GGG | + | chr1.2:73824816-73824835 | MS.gene005908:intron | 35.0% | |
GGTTCTACCCAAAGATTTAA+GGG | - | chr1.2:73825617-73825636 | None:intergenic | 35.0% | |
GTCATACCATATGAAAGAAG+CGG | + | chr1.2:73824439-73824458 | MS.gene005908:CDS | 35.0% | |
TAACTAACTAGGAATTACCC+TGG | - | chr1.2:73824836-73824855 | None:intergenic | 35.0% | |
TACAACTCAATTTATCCGGA+AGG | + | chr1.2:73829470-73829489 | MS.gene005908:CDS | 35.0% | |
TATAAGAGGATATGAGCACT+AGG | - | chr1.2:73825662-73825681 | None:intergenic | 35.0% | |
TCAAACAGGAGCTATAACTT+TGG | + | chr1.2:73824291-73824310 | MS.gene005908:CDS | 35.0% | |
TCCATGCTCTTGAATTCATT+TGG | + | chr1.2:73829713-73829732 | MS.gene005908:intron | 35.0% | |
TGAACTGAAGTTACACTTAC+AGG | - | chr1.2:73824644-73824663 | None:intergenic | 35.0% | |
TGAATCATAAAGAGCCAGAT+TGG | + | chr1.2:73826681-73826700 | MS.gene005908:intron | 35.0% | |
TGCAAACATCTAGAAGATGT+AGG | - | chr1.2:73824035-73824054 | None:intergenic | 35.0% | |
TGGATATAAATGTAGCAACC+AGG | + | chr1.2:73824815-73824834 | MS.gene005908:intron | 35.0% | |
TGTGGAGAAAAATTCCAAAC+TGG | + | chr1.2:73827166-73827185 | MS.gene005908:intron | 35.0% | |
TTCAAATGTTGAACATGACG+AGG | + | chr1.2:73824146-73824165 | MS.gene005908:CDS | 35.0% | |
TTGATTCCATGGAATCTTCT+GGG | + | chr1.2:73824205-73824224 | MS.gene005908:CDS | 35.0% | |
TTTCTCATGTCCTTTCAGTA+TGG | + | chr1.2:73829084-73829103 | MS.gene005908:intron | 35.0% | |
! | AGTAATTTGTCCTCTCTTCT+TGG | - | chr1.2:73825292-73825311 | None:intergenic | 35.0% |
! | ATTTGTTAGGAGTGGTGAAT+GGG | + | chr1.2:73828155-73828174 | MS.gene005908:intron | 35.0% |
! | TATATGTCTGAAGTCTTCAC+GGG | - | chr1.2:73827199-73827218 | None:intergenic | 35.0% |
! | TCATCATTTTCCCTTTCACT+TGG | - | chr1.2:73824476-73824495 | None:intergenic | 35.0% |
! | TGGTTCTACCCAAAGATTTA+AGG | - | chr1.2:73825618-73825637 | None:intergenic | 35.0% |
! | TGTCTGGAGTGTATGTATAA+AGG | - | chr1.2:73829511-73829530 | None:intergenic | 35.0% |
!! | AAGAAGTATCAGACCATCAA+AGG | + | chr1.2:73825091-73825110 | MS.gene005908:CDS | 35.0% |
!! | AATTTGTTAGGAGTGGTGAA+TGG | + | chr1.2:73828154-73828173 | MS.gene005908:intron | 35.0% |
!! | AGCATTATTAACTTGGTGTG+TGG | + | chr1.2:73827725-73827744 | MS.gene005908:intron | 35.0% |
!! | AGTTTGGAATTTTTCTCCAC+AGG | - | chr1.2:73827167-73827186 | None:intergenic | 35.0% |
!! | TGATGTTTTTACCTGTTTGG+TGG | + | chr1.2:73827913-73827932 | MS.gene005908:intron | 35.0% |
!!! | AACCAAATGGCTGTGTTTTT+TGG | - | chr1.2:73825227-73825246 | None:intergenic | 35.0% |
!!! | ACCAAATGGCTGTGTTTTTT+GGG | - | chr1.2:73825226-73825245 | None:intergenic | 35.0% |
!!! | GCATATTGTGTGTTTTGAAG+TGG | + | chr1.2:73829002-73829021 | MS.gene005908:intron | 35.0% |
!!! | TATTGTTTTGGCAGCTAGTA+TGG | - | chr1.2:73826507-73826526 | None:intergenic | 35.0% |
!!! | TATTTTGACGCCATACTGAA+AGG | - | chr1.2:73829097-73829116 | None:intergenic | 35.0% |
AAAAAAGGATGTGTTCCTGC+AGG | - | chr1.2:73824777-73824796 | None:intergenic | 40.0% | |
AACTCAATTTATCCGGAAGG+AGG | + | chr1.2:73829473-73829492 | MS.gene005908:CDS | 40.0% | |
AAGAAGACACCAAGCAAGAT+CGG | - | chr1.2:73826461-73826480 | None:intergenic | 40.0% | |
AATCCTCCGCTTCTTTCATA+TGG | - | chr1.2:73824448-73824467 | None:intergenic | 40.0% | |
ACATAACCAGCATAGAGATC+TGG | - | chr1.2:73828003-73828022 | None:intergenic | 40.0% | |
ACCTAGACGTTAATTACCTG+TGG | + | chr1.2:73827148-73827167 | MS.gene005908:intron | 40.0% | |
ACTGGCTATCTTCTTCAAAC+AGG | + | chr1.2:73824277-73824296 | MS.gene005908:CDS | 40.0% | |
AGACTTGGAGATCAATGAGT+TGG | + | chr1.2:73828420-73828439 | MS.gene005908:intron | 40.0% | |
AGGATAAACTGAGTACTCTG+TGG | + | chr1.2:73828961-73828980 | MS.gene005908:intron | 40.0% | |
ATACCATATGAAAGAAGCGG+AGG | + | chr1.2:73824442-73824461 | MS.gene005908:CDS | 40.0% | |
ATTAACGTCTAGGTGAAGGT+AGG | - | chr1.2:73827142-73827161 | None:intergenic | 40.0% | |
CATAACCAGCATAGAGATCT+GGG | - | chr1.2:73828002-73828021 | None:intergenic | 40.0% | |
CGTACAAATTTGTGGAGGTT+TGG | - | chr1.2:73827857-73827876 | None:intergenic | 40.0% | |
CTTGATTCCATGGAATCTTC+TGG | + | chr1.2:73824204-73824223 | MS.gene005908:CDS | 40.0% | |
CTTGTTCCCGTACAAATTTG+TGG | - | chr1.2:73827865-73827884 | None:intergenic | 40.0% | |
GAAGTTAAAATGGGGAGACA+AGG | + | chr1.2:73825491-73825510 | MS.gene005908:intron | 40.0% | |
GAATCGGAAATTGTTGGGAA+CGG | + | chr1.2:73825924-73825943 | MS.gene005908:intron | 40.0% | |
GAGAGGACAAATTACTGCAA+AGG | + | chr1.2:73825296-73825315 | MS.gene005908:intron | 40.0% | |
GAGGAATGAACAAAACGCAA+TGG | - | chr1.2:73829038-73829057 | None:intergenic | 40.0% | |
GATACTTCTTCGTTCTCAGA+TGG | - | chr1.2:73825081-73825100 | None:intergenic | 40.0% | |
GATGTTTGCACATTTCCACA+TGG | + | chr1.2:73824045-73824064 | MS.gene005908:CDS | 40.0% | |
GCAATATTCTTCGACAGGAA+TGG | - | chr1.2:73827254-73827273 | None:intergenic | 40.0% | |
GCATGAGACCTTCTAATGAA+AGG | - | chr1.2:73825745-73825764 | None:intergenic | 40.0% | |
GGATAAACTGAGTACTCTGT+GGG | + | chr1.2:73828962-73828981 | MS.gene005908:intron | 40.0% | |
GGGTGTTTAATATAGCTGTG+AGG | - | chr1.2:73827121-73827140 | None:intergenic | 40.0% | |
GGGTTTAGACCAAAAAGAGA+GGG | - | chr1.2:73828563-73828582 | None:intergenic | 40.0% | |
GGTAATTAACGTCTAGGTGA+AGG | - | chr1.2:73827146-73827165 | None:intergenic | 40.0% | |
GGTGTATCACTATATTGGGA+AGG | - | chr1.2:73826243-73826262 | None:intergenic | 40.0% | |
GTATGTGAAAGGAATTGAGC+AGG | - | chr1.2:73825580-73825599 | None:intergenic | 40.0% | |
GTCCAGAATCGGAAATTGTT+GGG | + | chr1.2:73825919-73825938 | MS.gene005908:intron | 40.0% | |
GTGGCGTTCATTGGAAATAT+CGG | + | chr1.2:73824562-73824581 | MS.gene005908:CDS | 40.0% | |
GTTACCATAACCAAGAAGAG+AGG | + | chr1.2:73825279-73825298 | MS.gene005908:intron | 40.0% | |
TACAATGACTTCCTAGGTCA+AGG | - | chr1.2:73826631-73826650 | None:intergenic | 40.0% | |
TCAAGCTCCTGTTTATTGCA+CGG | - | chr1.2:73824914-73824933 | None:intergenic | 40.0% | |
TCCACAGGTAATTAACGTCT+AGG | - | chr1.2:73827152-73827171 | None:intergenic | 40.0% | |
TGATGAAATGTGGCGTTCAT+TGG | + | chr1.2:73824553-73824572 | MS.gene005908:CDS | 40.0% | |
TGTTGTCTCTCTTGGATAGA+CGG | - | chr1.2:73827318-73827337 | None:intergenic | 40.0% | |
TTAACGTCTAGGTGAAGGTA+GGG | - | chr1.2:73827141-73827160 | None:intergenic | 40.0% | |
TTACAGGAATAGGAACCATC+TGG | - | chr1.2:73824628-73824647 | None:intergenic | 40.0% | |
TTCCCAACAATTTCCGATTC+TGG | - | chr1.2:73825924-73825943 | None:intergenic | 40.0% | |
TTGTCCTCTCTTCTTGGTTA+TGG | - | chr1.2:73825286-73825305 | None:intergenic | 40.0% | |
TTTGTTAGGAGTGGTGAATG+GGG | + | chr1.2:73828156-73828175 | MS.gene005908:intron | 40.0% | |
! | CTATGCTGGTTATGTTCCTA+TGG | + | chr1.2:73828008-73828027 | MS.gene005908:CDS | 40.0% |
! | CTGATTGAGTCTAAGGTTGA+TGG | + | chr1.2:73826897-73826916 | MS.gene005908:CDS | 40.0% |
! | GAGCATGAAGTTGGAGTATT+TGG | + | chr1.2:73824494-73824513 | MS.gene005908:CDS | 40.0% |
! | GAGTATTTGGTTCGTCTTCT+AGG | + | chr1.2:73824507-73824526 | MS.gene005908:CDS | 40.0% |
!! | AGAAGTAAATCCTTTGGGGT+GGG | + | chr1.2:73827486-73827505 | MS.gene005908:intron | 40.0% |
!! | TCTTCTCTTGATGGTGAAGT+AGG | + | chr1.2:73824590-73824609 | MS.gene005908:CDS | 40.0% |
!!! | CCAAATGGCTGTGTTTTTTG+GGG | - | chr1.2:73825225-73825244 | None:intergenic | 40.0% |
AAACTGAGTACTCTGTGGGT+GGG | + | chr1.2:73828966-73828985 | MS.gene005908:intron | 45.0% | |
AAGCTCCTGTTTATTGCACG+GGG | - | chr1.2:73824912-73824931 | None:intergenic | 45.0% | |
ACACTCCAGACACACGATAA+TGG | + | chr1.2:73829519-73829538 | MS.gene005908:intron | 45.0% | |
ACGGGAACAAGTTGTTCAAC+AGG | + | chr1.2:73827874-73827893 | MS.gene005908:CDS | 45.0% | |
AGAGGATATGAGCACTAGGT+AGG | - | chr1.2:73825658-73825677 | None:intergenic | 45.0% | |
AGGATTGTGGTCCAAGTGAA+AGG | + | chr1.2:73824462-73824481 | MS.gene005908:CDS | 45.0% | |
AGTGTGGTGCATAATCTCTG+TGG | + | chr1.2:73829341-73829360 | MS.gene005908:intron | 45.0% | |
ATCTCTGTGGTGTGTACTGT+TGG | + | chr1.2:73829354-73829373 | MS.gene005908:intron | 45.0% | |
ATGAAAGAAGCGGAGGATTG+TGG | + | chr1.2:73824449-73824468 | MS.gene005908:CDS | 45.0% | |
ATGACTCATCTACGGGATTC+TGG | - | chr1.2:73824424-73824443 | None:intergenic | 45.0% | |
ATGACTTCCTAGGTCAAGGT+TGG | - | chr1.2:73826627-73826646 | None:intergenic | 45.0% | |
ATTCCATGGAATCTTCTGGG+AGG | + | chr1.2:73824208-73824227 | MS.gene005908:CDS | 45.0% | |
ATTGGGAAGGTTTCCCGAAT+GGG | - | chr1.2:73826230-73826249 | None:intergenic | 45.0% | |
CAAGCTCCTGTTTATTGCAC+GGG | - | chr1.2:73824913-73824932 | None:intergenic | 45.0% | |
CCCCAAAAAACACAGCCATT+TGG | + | chr1.2:73825222-73825241 | MS.gene005908:intron | 45.0% | |
CTATACCCCGTGCAATAAAC+AGG | + | chr1.2:73824904-73824923 | MS.gene005908:intron | 45.0% | |
CTTGTGGACTTCTGTATCTG+CGG | - | chr1.2:73829165-73829184 | None:intergenic | 45.0% | |
GGAACTGCTGTAAAAAGGTG+AGG | + | chr1.2:73828877-73828896 | MS.gene005908:intron | 45.0% | |
GGATTGTGGTCCAAGTGAAA+GGG | + | chr1.2:73824463-73824482 | MS.gene005908:CDS | 45.0% | |
GGGGTCACAAGATCATGAAT+CGG | - | chr1.2:73826436-73826455 | None:intergenic | 45.0% | |
GGGGTTTAGACCAAAAAGAG+AGG | - | chr1.2:73828564-73828583 | None:intergenic | 45.0% | |
GGGTCACAAGATCATGAATC+GGG | - | chr1.2:73826435-73826454 | None:intergenic | 45.0% | |
GGTCACAAGATCATGAATCG+GGG | - | chr1.2:73826434-73826453 | None:intergenic | 45.0% | |
GGTCCAGAATCGGAAATTGT+TGG | + | chr1.2:73825918-73825937 | MS.gene005908:intron | 45.0% | |
GTCACAAGATCATGAATCGG+GGG | - | chr1.2:73826433-73826452 | None:intergenic | 45.0% | |
GTTCCCGTACAAATTTGTGG+AGG | - | chr1.2:73827862-73827881 | None:intergenic | 45.0% | |
TAAACTGAGTACTCTGTGGG+TGG | + | chr1.2:73828965-73828984 | MS.gene005908:intron | 45.0% | |
TATAGCTGTGAGGCAGTGTT+TGG | - | chr1.2:73827111-73827130 | None:intergenic | 45.0% | |
TATTGGGAAGGTTTCCCGAA+TGG | - | chr1.2:73826231-73826250 | None:intergenic | 45.0% | |
TCATCCAACACATCCCAATC+TGG | - | chr1.2:73826698-73826717 | None:intergenic | 45.0% | |
TCTCTCTTGGATAGACGGTT+GGG | - | chr1.2:73827313-73827332 | None:intergenic | 45.0% | |
TGACTTCCTAGGTCAAGGTT+GGG | - | chr1.2:73826626-73826645 | None:intergenic | 45.0% | |
TGATGGAGATGGTAACTGTC+AGG | + | chr1.2:73826914-73826933 | MS.gene005908:CDS | 45.0% | |
TGCGACTATGCACTCTTAAG+AGG | + | chr1.2:73829790-73829809 | MS.gene005908:CDS | 45.0% | |
TGCTGCAGATTGGGTATGAA+GGG | + | chr1.2:73828200-73828219 | MS.gene005908:intron | 45.0% | |
TGCTGTAAAAAGGTGAGGAC+CGG | + | chr1.2:73828882-73828901 | MS.gene005908:intron | 45.0% | |
TGCTTAGTCGTGTATGGGTA+AGG | - | chr1.2:73826181-73826200 | None:intergenic | 45.0% | |
TGCTTGAGTAGGTCCAGAAT+CGG | + | chr1.2:73825908-73825927 | MS.gene005908:intron | 45.0% | |
! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr1.2:73828502-73828521 | None:intergenic | 45.0% |
! | ACCTTCAGAAGAAGGGGTTT+TGG | - | chr1.2:73826554-73826573 | None:intergenic | 45.0% |
! | ATTTCTGAGCTTTTGGGCAG+AGG | + | chr1.2:73829442-73829461 | MS.gene005908:CDS | 45.0% |
! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr1.2:73828503-73828522 | None:intergenic | 45.0% |
! | CAGAAGTAAATCCTTTGGGG+TGG | + | chr1.2:73827485-73827504 | MS.gene005908:intron | 45.0% |
! | CTTTGTGAGCCCTCTCTTTT+TGG | + | chr1.2:73828551-73828570 | MS.gene005908:intron | 45.0% |
! | GAGAGGGCTCACAAAGATTT+TGG | - | chr1.2:73828547-73828566 | None:intergenic | 45.0% |
! | GGGCTCACAAAGATTTTGGA+AGG | - | chr1.2:73828543-73828562 | None:intergenic | 45.0% |
! | GTTCTAACTTGCACGCAAAG+AGG | - | chr1.2:73826790-73826809 | None:intergenic | 45.0% |
! | TTCAAGAGCATGGAAGAGAC+TGG | - | chr1.2:73829707-73829726 | None:intergenic | 45.0% |
! | TTTGGTTCGTCTTCTAGGTC+AGG | + | chr1.2:73824512-73824531 | MS.gene005908:CDS | 45.0% |
!! | GAAGTAAATCCTTTGGGGTG+GGG | + | chr1.2:73827487-73827506 | MS.gene005908:intron | 45.0% |
!! | GAGTCTAAGGTTGATGGAGA+TGG | + | chr1.2:73826903-73826922 | MS.gene005908:CDS | 45.0% |
!! | TAAAGGAAGCACCACCAAAC+AGG | - | chr1.2:73827927-73827946 | None:intergenic | 45.0% |
!! | AAATAAATATTATATAATAC+TGG | - | chr1.2:73826986-73827005 | None:intergenic | 5.0% |
ACACCAAGCAAGATCGGTAG+GGG | - | chr1.2:73826455-73826474 | None:intergenic | 50.0% | |
ACCAGCATAGAGATCTGGGT+CGG | - | chr1.2:73827998-73828017 | None:intergenic | 50.0% | |
ACCATCAAAGGCTGCTAGAC+AGG | + | chr1.2:73825103-73825122 | MS.gene005908:CDS | 50.0% | |
ACCTGTCTAGCAGCCTTTGA+TGG | - | chr1.2:73825107-73825126 | None:intergenic | 50.0% | |
ACGCGTGGAAACGGTGAAAT+CGG | + | chr1.2:73825964-73825983 | MS.gene005908:intron | 50.0% | |
AGACACCAAGCAAGATCGGT+AGG | - | chr1.2:73826457-73826476 | None:intergenic | 50.0% | |
AGAGCCAGATTGGGATGTGT+TGG | + | chr1.2:73826691-73826710 | MS.gene005908:intron | 50.0% | |
CATCCTCCCAGAAGATTCCA+TGG | - | chr1.2:73824214-73824233 | None:intergenic | 50.0% | |
CCACTTAGTGGGAAAAGGCT+TGG | + | chr1.2:73828501-73828520 | MS.gene005908:intron | 50.0% | |
CCCGAAATTTCAAGGAGACG+CGG | - | chr1.2:73825990-73826009 | None:intergenic | 50.0% | |
CCGCGTCTCCTTGAAATTTC+GGG | + | chr1.2:73825987-73826006 | MS.gene005908:intron | 50.0% | |
CCTGCGAACCCGAAATTTCA+AGG | - | chr1.2:73825998-73826017 | None:intergenic | 50.0% | |
CTGCAGACCTTCAGAAGAAG+GGG | - | chr1.2:73826560-73826579 | None:intergenic | 50.0% | |
CTGCTGCAGATTGGGTATGA+AGG | + | chr1.2:73828199-73828218 | MS.gene005908:intron | 50.0% | |
CTTTGGGTAGAACCACAGAG+TGG | + | chr1.2:73825623-73825642 | MS.gene005908:intron | 50.0% | |
GACACCAAGCAAGATCGGTA+GGG | - | chr1.2:73826456-73826475 | None:intergenic | 50.0% | |
GATCCTGACGTTGTTCGATG+GGG | + | chr1.2:73824009-73824028 | MS.gene005908:CDS | 50.0% | |
GCCAAAACCCCTTCTTCTGA+AGG | + | chr1.2:73826550-73826569 | MS.gene005908:intron | 50.0% | |
GCCGCGTCTCCTTGAAATTT+CGG | + | chr1.2:73825986-73826005 | MS.gene005908:intron | 50.0% | |
GCTGCAGACCTTCAGAAGAA+GGG | - | chr1.2:73826561-73826580 | None:intergenic | 50.0% | |
GGAGATGGTAACTGTCAGGT+TGG | + | chr1.2:73826918-73826937 | MS.gene005908:intron | 50.0% | |
GGATCCTGACGTTGTTCGAT+GGG | + | chr1.2:73824008-73824027 | MS.gene005908:CDS | 50.0% | |
GTCTCTCTTGGATAGACGGT+TGG | - | chr1.2:73827314-73827333 | None:intergenic | 50.0% | |
TACCATCTGCGTGCTTGAGT+AGG | + | chr1.2:73825897-73825916 | MS.gene005908:intron | 50.0% | |
TAGCCAGTCCTGTGCATCTA+CGG | - | chr1.2:73824265-73824284 | None:intergenic | 50.0% | |
TCCTAGGTCAAGGTTGGGAT+GGG | - | chr1.2:73826621-73826640 | None:intergenic | 50.0% | |
TCGGACGAGTCTTCTCTTGA+TGG | + | chr1.2:73824581-73824600 | MS.gene005908:CDS | 50.0% | |
TCTTGGATAGACGGTTGGGT+GGG | - | chr1.2:73827309-73827328 | None:intergenic | 50.0% | |
TGAATCGGGGGATCACAACA+CGG | - | chr1.2:73826421-73826440 | None:intergenic | 50.0% | |
TGCTGCAGACCTTCAGAAGA+AGG | - | chr1.2:73826562-73826581 | None:intergenic | 50.0% | |
TGGATCCTGACGTTGTTCGA+TGG | + | chr1.2:73824007-73824026 | MS.gene005908:CDS | 50.0% | |
TTCCTAGGTCAAGGTTGGGA+TGG | - | chr1.2:73826622-73826641 | None:intergenic | 50.0% | |
! | ACCGTTTCCACGCGTTTTTG+CGG | - | chr1.2:73825959-73825978 | None:intergenic | 50.0% |
! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr1.2:73828504-73828523 | None:intergenic | 50.0% |
!! | CCTTGAAATTTCGGGTTCGC+AGG | + | chr1.2:73825995-73826014 | MS.gene005908:intron | 50.0% |
!! | GAAATTTCGGGTTCGCAGGT+CGG | + | chr1.2:73825999-73826018 | MS.gene005908:intron | 50.0% |
!!! | GGCTGTGTTTTTTGGGGAGA+TGG | - | chr1.2:73825219-73825238 | None:intergenic | 50.0% |
ACACCGAGTTACGACACCAG+GGG | - | chr1.2:73824076-73824095 | None:intergenic | 55.0% | |
ACTAAGTGGGGCCGTCTACA+TGG | - | chr1.2:73828490-73828509 | None:intergenic | 55.0% | |
ATGTAGACGGCCCCACTTAG+TGG | + | chr1.2:73828489-73828508 | MS.gene005908:intron | 55.0% | |
CACACCGAGTTACGACACCA+GGG | - | chr1.2:73824077-73824096 | None:intergenic | 55.0% | |
CATCCGTAGATGCACAGGAC+TGG | + | chr1.2:73824259-73824278 | MS.gene005908:CDS | 55.0% | |
CTCTTGGATAGACGGTTGGG+TGG | - | chr1.2:73827310-73827329 | None:intergenic | 55.0% | |
GAATCGGGGGATCACAACAC+GGG | - | chr1.2:73826420-73826439 | None:intergenic | 55.0% | |
GACCTACTCAAGCACGCAGA+TGG | - | chr1.2:73825902-73825921 | None:intergenic | 55.0% | |
GCCGCAAAAACGCGTGGAAA+CGG | + | chr1.2:73825955-73825974 | MS.gene005908:intron | 55.0% | |
GGAAATTGTTGGGAACGGCC+AGG | + | chr1.2:73825929-73825948 | MS.gene005908:intron | 55.0% | |
GGGTAGAACCACAGAGTGGA+GGG | + | chr1.2:73825627-73825646 | MS.gene005908:intron | 55.0% | |
GGTAGAACCACAGAGTGGAG+GGG | + | chr1.2:73825628-73825647 | MS.gene005908:intron | 55.0% | |
GTTGCAGGCTGCTGCAGATT+GGG | + | chr1.2:73828191-73828210 | MS.gene005908:CDS | 55.0% | |
TCACACCGAGTTACGACACC+AGG | - | chr1.2:73824078-73824097 | None:intergenic | 55.0% | |
TCCCATCCCAACCTTGACCT+AGG | + | chr1.2:73826617-73826636 | MS.gene005908:intron | 55.0% | |
TCCGACCCAGATCTCTATGC+TGG | + | chr1.2:73827994-73828013 | MS.gene005908:CDS | 55.0% | |
TGACCCCTACCGATCTTGCT+TGG | + | chr1.2:73826449-73826468 | MS.gene005908:intron | 55.0% | |
TGGGTAGAACCACAGAGTGG+AGG | + | chr1.2:73825626-73825645 | MS.gene005908:intron | 55.0% | |
TGTAGACGGCCCCACTTAGT+GGG | + | chr1.2:73828490-73828509 | MS.gene005908:intron | 55.0% | |
TTTCCACATGGTCGATCCCC+TGG | + | chr1.2:73824057-73824076 | MS.gene005908:CDS | 55.0% | |
!! | AATCCTTTGGGGTGGGGTAG+AGG | + | chr1.2:73827493-73827512 | MS.gene005908:intron | 55.0% |
!! | ATCCTTTGGGGTGGGGTAGA+GGG | + | chr1.2:73827494-73827513 | MS.gene005908:intron | 55.0% |
!! | GATCCCCTGGTGTCGTAACT+CGG | + | chr1.2:73824070-73824089 | MS.gene005908:CDS | 55.0% |
AACCCTCTACCCCACCCCAA+AGG | - | chr1.2:73827499-73827518 | None:intergenic | 60.0% | |
ACACCAGGGGATCGACCATG+TGG | - | chr1.2:73824063-73824082 | None:intergenic | 60.0% | |
AGGATCGCCGCAAAAACGCG+TGG | + | chr1.2:73825949-73825968 | MS.gene005908:intron | 60.0% | |
AGGCCCCATCGAACAACGTC+AGG | - | chr1.2:73824015-73824034 | None:intergenic | 60.0% | |
CACATAACGCTGCGACCTGC+AGG | + | chr1.2:73824759-73824778 | MS.gene005908:intron | 60.0% | |
CGGCCCCACTTAGTGGGAAA+AGG | + | chr1.2:73828496-73828515 | MS.gene005908:intron | 60.0% | |
CGTTGCAGGCTGCTGCAGAT+TGG | + | chr1.2:73828190-73828209 | MS.gene005908:CDS | 60.0% | |
GCGAGCATCCGTAGATGCAC+AGG | + | chr1.2:73824254-73824273 | MS.gene005908:CDS | 60.0% | |
GGGCGATCATGTCACGTTGC+AGG | + | chr1.2:73828176-73828195 | MS.gene005908:CDS | 60.0% | |
TCACGGGAGCAGCACCAGTT+TGG | - | chr1.2:73827183-73827202 | None:intergenic | 60.0% | |
! | ACGCGTTTTTGCGGCGATCC+TGG | - | chr1.2:73825950-73825969 | None:intergenic | 60.0% |
AGGTGTGCCCCTCCACTCTG+TGG | - | chr1.2:73825638-73825657 | None:intergenic | 65.0% | |
! | CGGGTTCGCAGGTCGGTTCA+CGG | + | chr1.2:73826006-73826025 | MS.gene005908:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 73823988 | 73829858 | 73823988 | ID=MS.gene005908 |
chr1.2 | mRNA | 73823988 | 73829858 | 73823988 | ID=MS.gene005908.t1;Parent=MS.gene005908 |
chr1.2 | exon | 73823988 | 73824312 | 73823988 | ID=MS.gene005908.t1.exon1;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73823988 | 73824312 | 73823988 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73824408 | 73824643 | 73824408 | ID=MS.gene005908.t1.exon2;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73824408 | 73824643 | 73824408 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73825051 | 73825124 | 73825051 | ID=MS.gene005908.t1.exon3;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73825051 | 73825124 | 73825051 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73826881 | 73826935 | 73826881 | ID=MS.gene005908.t1.exon4;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73826881 | 73826935 | 73826881 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73827821 | 73827895 | 73827821 | ID=MS.gene005908.t1.exon5;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73827821 | 73827895 | 73827821 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73827988 | 73828061 | 73827988 | ID=MS.gene005908.t1.exon6;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73827988 | 73828061 | 73827988 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73828164 | 73828212 | 73828164 | ID=MS.gene005908.t1.exon7;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73828164 | 73828212 | 73828164 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73829102 | 73829186 | 73829102 | ID=MS.gene005908.t1.exon8;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73829102 | 73829186 | 73829102 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73829438 | 73829494 | 73829438 | ID=MS.gene005908.t1.exon9;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73829438 | 73829494 | 73829438 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
chr1.2 | exon | 73829758 | 73829858 | 73829758 | ID=MS.gene005908.t1.exon10;Parent=MS.gene005908.t1 |
chr1.2 | CDS | 73829758 | 73829858 | 73829758 | ID=cds.MS.gene005908.t1;Parent=MS.gene005908.t1 |
Gene Sequence |
Protein sequence |