Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21128.t1 | XP_013469143.1 | 98.2 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.00E+00 | 1080.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21128.t1 | P55826 | 77.6 | 540 | 115 | 2 | 12 | 551 | 4 | 537 | 3.2e-239 | 828.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21128.t1 | A0A072VNG3 | 98.2 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.0e+00 | 1080.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene21128 | 0.803374 | 3.59E-49 | -1.69E-46 |
MS.gene049232 | MS.gene21128 | 0.80377 | 2.97E-49 | -1.69E-46 |
MS.gene049285 | MS.gene21128 | 0.862307 | 5.56E-64 | -1.69E-46 |
MS.gene049320 | MS.gene21128 | 0.847029 | 1.50E-59 | -1.69E-46 |
MS.gene049627 | MS.gene21128 | 0.849007 | 4.26E-60 | -1.69E-46 |
MS.gene05010 | MS.gene21128 | 0.814204 | 1.74E-51 | -1.69E-46 |
MS.gene050163 | MS.gene21128 | 0.866242 | 3.29E-65 | -1.69E-46 |
MS.gene050165 | MS.gene21128 | 0.884109 | 2.54E-71 | -1.69E-46 |
MS.gene050333 | MS.gene21128 | 0.896293 | 4.24E-76 | -1.69E-46 |
MS.gene050504 | MS.gene21128 | 0.853054 | 3.08E-61 | -1.69E-46 |
MS.gene050518 | MS.gene21128 | 0.849706 | 2.72E-60 | -1.69E-46 |
MS.gene050612 | MS.gene21128 | 0.85223 | 5.29E-61 | -1.69E-46 |
MS.gene050675 | MS.gene21128 | 0.831942 | 1.25E-55 | -1.69E-46 |
MS.gene050699 | MS.gene21128 | 0.819045 | 1.43E-52 | -1.69E-46 |
MS.gene050876 | MS.gene21128 | 0.892965 | 9.75E-75 | -1.69E-46 |
MS.gene05087 | MS.gene21128 | 0.884223 | 2.30E-71 | -1.69E-46 |
MS.gene050904 | MS.gene21128 | 0.812924 | 3.32E-51 | -1.69E-46 |
MS.gene050986 | MS.gene21128 | 0.852806 | 3.62E-61 | -1.69E-46 |
MS.gene05100 | MS.gene21128 | 0.81207 | 5.10E-51 | -1.69E-46 |
MS.gene051564 | MS.gene21128 | 0.802882 | 4.54E-49 | -1.69E-46 |
MS.gene051810 | MS.gene21128 | 0.831451 | 1.66E-55 | -1.69E-46 |
MS.gene051949 | MS.gene21128 | 0.833239 | 5.98E-56 | -1.69E-46 |
MS.gene052271 | MS.gene21128 | 0.806612 | 7.56E-50 | -1.69E-46 |
MS.gene052486 | MS.gene21128 | 0.81544 | 9.24E-52 | -1.69E-46 |
MS.gene052916 | MS.gene21128 | 0.830345 | 3.09E-55 | -1.69E-46 |
MS.gene053213 | MS.gene21128 | 0.805316 | 1.42E-49 | -1.69E-46 |
MS.gene053286 | MS.gene21128 | 0.813196 | 2.89E-51 | -1.69E-46 |
MS.gene054600 | MS.gene21128 | 0.800904 | 1.16E-48 | -1.69E-46 |
MS.gene054638 | MS.gene21128 | 0.844288 | 8.29E-59 | -1.69E-46 |
MS.gene054642 | MS.gene21128 | 0.832738 | 7.96E-56 | -1.69E-46 |
MS.gene054954 | MS.gene21128 | 0.859181 | 4.94E-63 | -1.69E-46 |
MS.gene055333 | MS.gene21128 | -0.821859 | 3.23E-53 | -1.69E-46 |
MS.gene055362 | MS.gene21128 | 0.848835 | 4.76E-60 | -1.69E-46 |
MS.gene055502 | MS.gene21128 | 0.805889 | 1.07E-49 | -1.69E-46 |
MS.gene055634 | MS.gene21128 | 0.908402 | 1.78E-81 | -1.69E-46 |
MS.gene055636 | MS.gene21128 | 0.82714 | 1.84E-54 | -1.69E-46 |
MS.gene055638 | MS.gene21128 | 0.863273 | 2.80E-64 | -1.69E-46 |
MS.gene055750 | MS.gene21128 | 0.808503 | 3.00E-50 | -1.69E-46 |
MS.gene055751 | MS.gene21128 | 0.8244 | 8.24E-54 | -1.69E-46 |
MS.gene055776 | MS.gene21128 | 0.827458 | 1.55E-54 | -1.69E-46 |
MS.gene055849 | MS.gene21128 | 0.826932 | 2.07E-54 | -1.69E-46 |
MS.gene056409 | MS.gene21128 | 0.8162 | 6.25E-52 | -1.69E-46 |
MS.gene056449 | MS.gene21128 | 0.809803 | 1.58E-50 | -1.69E-46 |
MS.gene056450 | MS.gene21128 | 0.826098 | 3.27E-54 | -1.69E-46 |
MS.gene056504 | MS.gene21128 | 0.806074 | 9.81E-50 | -1.69E-46 |
MS.gene056510 | MS.gene21128 | 0.822044 | 2.92E-53 | -1.69E-46 |
MS.gene056549 | MS.gene21128 | 0.806292 | 8.83E-50 | -1.69E-46 |
MS.gene056657 | MS.gene21128 | 0.854021 | 1.62E-61 | -1.69E-46 |
MS.gene056692 | MS.gene21128 | 0.848282 | 6.77E-60 | -1.69E-46 |
MS.gene056910 | MS.gene21128 | 0.83057 | 2.73E-55 | -1.69E-46 |
MS.gene057148 | MS.gene21128 | 0.849947 | 2.33E-60 | -1.69E-46 |
MS.gene057831 | MS.gene21128 | 0.800997 | 1.11E-48 | -1.69E-46 |
MS.gene057986 | MS.gene21128 | 0.846104 | 2.68E-59 | -1.69E-46 |
MS.gene058419 | MS.gene21128 | 0.818826 | 1.60E-52 | -1.69E-46 |
MS.gene058719 | MS.gene21128 | 0.843215 | 1.61E-58 | -1.69E-46 |
MS.gene058773 | MS.gene21128 | 0.849413 | 3.29E-60 | -1.69E-46 |
MS.gene059022 | MS.gene21128 | 0.867558 | 1.25E-65 | -1.69E-46 |
MS.gene059026 | MS.gene21128 | 0.853528 | 2.25E-61 | -1.69E-46 |
MS.gene059029 | MS.gene21128 | 0.80696 | 6.38E-50 | -1.69E-46 |
MS.gene059079 | MS.gene21128 | 0.804372 | 2.23E-49 | -1.69E-46 |
MS.gene059677 | MS.gene21128 | 0.848285 | 6.76E-60 | -1.69E-46 |
MS.gene059718 | MS.gene21128 | 0.809744 | 1.63E-50 | -1.69E-46 |
MS.gene059865 | MS.gene21128 | 0.808177 | 3.52E-50 | -1.69E-46 |
MS.gene060703 | MS.gene21128 | 0.869855 | 2.26E-66 | -1.69E-46 |
MS.gene060762 | MS.gene21128 | 0.814603 | 1.42E-51 | -1.69E-46 |
MS.gene06077 | MS.gene21128 | 0.83042 | 2.97E-55 | -1.69E-46 |
MS.gene061150 | MS.gene21128 | 0.81399 | 1.94E-51 | -1.69E-46 |
MS.gene061171 | MS.gene21128 | 0.836817 | 7.49E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034800 | MS.gene21128 | PPI |
MS.gene055647 | MS.gene21128 | PPI |
MS.gene007149 | MS.gene21128 | PPI |
MS.gene025636 | MS.gene21128 | PPI |
MS.gene41080 | MS.gene21128 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21128.t1 | MTR_1g085730 | 98.185 | 551 | 10 | 0 | 1 | 551 | 1 | 551 | 0.0 | 1097 |
MS.gene21128.t1 | MTR_1g085730 | 97.527 | 364 | 9 | 0 | 1 | 364 | 1 | 364 | 0.0 | 723 |
MS.gene21128.t1 | MTR_7g031310 | 29.615 | 493 | 310 | 14 | 73 | 545 | 16 | 491 | 4.36e-51 | 182 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21128.t1 | AT4G01690 | 78.889 | 540 | 108 | 4 | 12 | 551 | 4 | 537 | 0.0 | 854 |
MS.gene21128.t1 | AT4G01690 | 74.259 | 540 | 102 | 5 | 12 | 551 | 4 | 506 | 0.0 | 784 |
MS.gene21128.t1 | AT5G14220 | 27.959 | 490 | 319 | 12 | 75 | 545 | 21 | 495 | 3.02e-49 | 178 |
MS.gene21128.t1 | AT5G14220 | 27.959 | 490 | 319 | 12 | 75 | 545 | 69 | 543 | 7.28e-49 | 178 |
MS.gene21128.t1 | AT5G14220 | 28.041 | 485 | 295 | 14 | 75 | 545 | 21 | 465 | 8.42e-47 | 171 |
MS.gene21128.t1 | AT5G14220 | 26.398 | 447 | 299 | 11 | 118 | 545 | 2 | 437 | 3.34e-40 | 152 |
MS.gene21128.t1 | AT5G14220 | 26.398 | 447 | 299 | 11 | 118 | 545 | 2 | 437 | 3.34e-40 | 152 |
Find 172 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTCAGGATCCAATTGTTT+TGG | 0.225364 | 1.4:+67893891 | MS.gene21128:CDS |
CAAAATGGTGGTAGCATTAT+TGG | 0.232913 | 1.4:+67891425 | MS.gene21128:CDS |
CCTGAGCATTTGGATTTATA+AGG | 0.239671 | 1.4:-67893876 | None:intergenic |
ATTGGAGGGGCTACCAATTC+TGG | 0.258952 | 1.4:+67893305 | MS.gene21128:CDS |
GATTTGAGGGGCTGTTCCTT+GGG | 0.259606 | 1.4:+67894004 | MS.gene21128:CDS |
TGCAAAGAAACAACTCCTTC+TGG | 0.269612 | 1.4:-67891848 | None:intergenic |
TGGAGAGAGATGGGTTTCTT+TGG | 0.273128 | 1.4:+67888998 | MS.gene21128:CDS |
TCTCTCCTGTATTGCTTTGA+AGG | 0.274882 | 1.4:-67891453 | None:intergenic |
GGCAAGATCAGGGCTGGCTT+TGG | 0.280653 | 1.4:+67889961 | MS.gene21128:CDS |
GGCAAATCAGTTGGCTTTCC+CGG | 0.284184 | 1.4:-67889913 | None:intergenic |
TCTGATCTAATGGCTTCTTT+TGG | 0.297997 | 1.4:-67892982 | None:intergenic |
ACAATTGGATCCTGAGCATT+TGG | 0.304286 | 1.4:-67893886 | None:intergenic |
GATGGTGAGTTGAAGGGATT+TGG | 0.305933 | 1.4:+67893015 | MS.gene21128:CDS |
TTAAGTATGAAAGCAGCTTT+TGG | 0.310156 | 1.4:+67891383 | MS.gene21128:CDS |
TTTGAAGGACGATCTTGTTT+TGG | 0.318825 | 1.4:+67889837 | MS.gene21128:CDS |
GCCTCGGTAACAACAACATT+GGG | 0.323168 | 1.4:-67888943 | None:intergenic |
TCAGAAGGTTGAAAACTATT+AGG | 0.342704 | 1.4:-67889030 | None:intergenic |
CTTCCAGGTGGTGCTCGGTT+AGG | 0.346004 | 1.4:-67893263 | None:intergenic |
CCATTCCACAACACAAATCT+AGG | 0.348854 | 1.4:-67889874 | None:intergenic |
GGATTTGAGGGGCTGTTCCT+TGG | 0.351474 | 1.4:+67894003 | MS.gene21128:CDS |
ACAGTTTGACCCTTTGGCTT+TGG | 0.353786 | 1.4:-67891592 | None:intergenic |
TACCTAATGTTTGCACTCCT+TGG | 0.364807 | 1.4:-67893056 | None:intergenic |
TGAGTATTGGTGGCAAGATC+AGG | 0.365761 | 1.4:+67889950 | MS.gene21128:CDS |
GAGTTCGTGCGTCGAAATCT+TGG | 0.366392 | 1.4:+67890171 | MS.gene21128:CDS |
TTCTTTGACTTAATGAGTAT+TGG | 0.369041 | 1.4:+67889937 | MS.gene21128:CDS |
TTGAATTGGAGGAGGGGAAA+GGG | 0.374371 | 1.4:-67888711 | None:intergenic |
GTAACAAGGTGAAGTTATCT+TGG | 0.380123 | 1.4:+67891768 | MS.gene21128:CDS |
GCTATTCCACAGTTCTTAGT+TGG | 0.382466 | 1.4:+67893934 | MS.gene21128:CDS |
GAAATGGAAACTGCCGCAAC+TGG | 0.385344 | 1.4:-67892955 | None:intergenic |
GCAAAGAAACAACTCCTTCT+GGG | 0.387031 | 1.4:-67891847 | None:intergenic |
CGGAGAAGGGTTTGAGAGGG+TGG | 0.387238 | 1.4:-67888673 | None:intergenic |
TATCAAGCATTCTGATCTAA+TGG | 0.392972 | 1.4:-67892992 | None:intergenic |
GGAGAGAGATGGGTTTCTTT+GGG | 0.394520 | 1.4:+67888999 | MS.gene21128:CDS |
TGGCTCTGACCTGAACAAAA+AGG | 0.394707 | 1.4:-67890222 | None:intergenic |
CTTTGATAAAATCCCAGAAT+TGG | 0.395418 | 1.4:-67893318 | None:intergenic |
CTATGTGTCTGGTGTTGCCT+TGG | 0.396049 | 1.4:+67894032 | MS.gene21128:CDS |
AGTTCGTGCGTCGAAATCTT+GGG | 0.397568 | 1.4:+67890172 | MS.gene21128:CDS |
TTCAAGAGTAGAACCCTTCC+AGG | 0.398239 | 1.4:-67893278 | None:intergenic |
TTCCAGGTGGTGCTCGGTTA+GGG | 0.398524 | 1.4:-67893262 | None:intergenic |
GATCCAACAGTTTGACCCTT+TGG | 0.399991 | 1.4:-67891598 | None:intergenic |
GATGGGTTTCTTTGGGAAGA+AGG | 0.407260 | 1.4:+67889006 | MS.gene21128:CDS |
GGTTTGAGAGGGTGGGAAGA+AGG | 0.407669 | 1.4:-67888665 | None:intergenic |
ACCACCTCAAAATCAAATTC+CGG | 0.416364 | 1.4:+67888826 | MS.gene21128:CDS |
TTGGAGGGGCTACCAATTCT+GGG | 0.425638 | 1.4:+67893306 | MS.gene21128:CDS |
TGGGAAATTGAGGCCGGTGC+CGG | 0.426371 | 1.4:+67889894 | MS.gene21128:CDS |
GTGGTGCTCGGTTAGGGAAA+AGG | 0.428455 | 1.4:-67893256 | None:intergenic |
GTCAAACTGTTGGATCATTC+CGG | 0.429218 | 1.4:+67891605 | MS.gene21128:CDS |
GCAACATGGTAAGTCCCTTC+CGG | 0.429534 | 1.4:-67891624 | None:intergenic |
AGTATTAGTAAACTGGATAG+TGG | 0.439960 | 1.4:+67891800 | MS.gene21128:CDS |
CTAGATTTGTGTTGTGGAAT+GGG | 0.440359 | 1.4:+67889875 | MS.gene21128:CDS |
AGGGCTGGCTTTGGAGCACT+TGG | 0.442410 | 1.4:+67889970 | MS.gene21128:CDS |
TACCTAGCAGAAATTGCGTT+TGG | 0.443372 | 1.4:-67891646 | None:intergenic |
ATGGAGATGAGGTCGGAGAA+GGG | 0.448046 | 1.4:-67888686 | None:intergenic |
TGGAGGAGGGGAAAGGGGAA+TGG | 0.448268 | 1.4:-67888705 | None:intergenic |
TTTGAATTGGAGGAGGGGAA+AGG | 0.454290 | 1.4:-67888712 | None:intergenic |
TGAATTGGAGGAGGGGAAAG+GGG | 0.455157 | 1.4:-67888710 | None:intergenic |
TCAGTTGGCTTTCCCGGCAC+CGG | 0.460917 | 1.4:-67889907 | None:intergenic |
TACTCTTGAATTACATTGGA+GGG | 0.461041 | 1.4:+67893291 | MS.gene21128:CDS |
GGAGACGGAGAATGGGGTTA+TGG | 0.461330 | 1.4:-67888762 | None:intergenic |
TATGTGTCTGGTGTTGCCTT+GGG | 0.462152 | 1.4:+67894033 | MS.gene21128:CDS |
GTGTGGAGGCTCGAACAAAA+TGG | 0.463440 | 1.4:+67891410 | MS.gene21128:CDS |
GGGAAAGGGGAATGGAGATG+AGG | 0.463920 | 1.4:-67888697 | None:intergenic |
AATGGAGATGAGGTCGGAGA+AGG | 0.468631 | 1.4:-67888687 | None:intergenic |
GGAGCAACGGAGACGGAGAA+TGG | 0.472053 | 1.4:-67888770 | None:intergenic |
AAGGAACAGCCCCTCAAATC+CGG | 0.472268 | 1.4:-67894001 | None:intergenic |
GTTCTACTCTTGAATTACAT+TGG | 0.473931 | 1.4:+67893287 | MS.gene21128:CDS |
AGAAAACACACTGGAGGAGG+AGG | 0.474459 | 1.4:-67890000 | None:intergenic |
AACACAAATCTAGGTGCATC+AGG | 0.475052 | 1.4:-67889865 | None:intergenic |
GAGCAACGGAGACGGAGAAT+GGG | 0.476836 | 1.4:-67888769 | None:intergenic |
TGGTGCTCGGTTAGGGAAAA+GGG | 0.478452 | 1.4:-67893255 | None:intergenic |
TTTGACTTAATGAGTATTGG+TGG | 0.479201 | 1.4:+67889940 | MS.gene21128:CDS |
GAAAGTGCATCTGCAGCAGC+AGG | 0.479760 | 1.4:-67892916 | None:intergenic |
GGGAAATTGAGGCCGGTGCC+GGG | 0.482439 | 1.4:+67889895 | MS.gene21128:CDS |
AGATCAGAATGCTTGATAGA+TGG | 0.483446 | 1.4:+67892997 | MS.gene21128:CDS |
CGCCTCGGTAACAACAACAT+TGG | 0.487396 | 1.4:-67888944 | None:intergenic |
GCCTTGGGAAGGTGTGTTGA+GGG | 0.489434 | 1.4:+67894048 | MS.gene21128:CDS |
CCTTATAAATCCAAATGCTC+AGG | 0.489745 | 1.4:+67893876 | MS.gene21128:CDS |
GCGTCGAAATCTTGGGGCCG+AGG | 0.491211 | 1.4:+67890179 | MS.gene21128:CDS |
AGCCAAGGAGTGCAAACATT+AGG | 0.492529 | 1.4:+67893054 | MS.gene21128:CDS |
GACTGTGTGGTTGTTGGTGG+TGG | 0.492721 | 1.4:+67888865 | MS.gene21128:CDS |
TTCCCTAACCGAGCACCACC+TGG | 0.500403 | 1.4:+67893260 | MS.gene21128:CDS |
CTTGATAGATGGTGAGTTGA+AGG | 0.501381 | 1.4:+67893008 | MS.gene21128:CDS |
ATTTGAGGGGCTGTTCCTTG+GGG | 0.502668 | 1.4:+67894005 | MS.gene21128:CDS |
AAGGGGAATGGAGATGAGGT+CGG | 0.506042 | 1.4:-67888693 | None:intergenic |
AAGCCAAAGGGTCAAACTGT+TGG | 0.506404 | 1.4:+67891595 | MS.gene21128:CDS |
GTGACAGGGTCATGAGGAAT+CGG | 0.511762 | 1.4:+67890143 | MS.gene21128:intron |
TCCGTCGACTGTGTGGTTGT+TGG | 0.512497 | 1.4:+67888859 | MS.gene21128:CDS |
ATTATTACCGTGGAGAGAGA+TGG | 0.512962 | 1.4:+67888988 | MS.gene21128:CDS |
TGCCTTGGGAAGGTGTGTTG+AGG | 0.513044 | 1.4:+67894047 | MS.gene21128:CDS |
TGGAGCCTTCAAAGCAATAC+AGG | 0.517480 | 1.4:+67891448 | MS.gene21128:CDS |
CCTAGATTTGTGTTGTGGAA+TGG | 0.519996 | 1.4:+67889874 | MS.gene21128:CDS |
ATACTCATTAAGTCAAAGAA+AGG | 0.523934 | 1.4:-67889934 | None:intergenic |
ACAGACAGTGGTTGCAGCAA+TGG | 0.525178 | 1.4:-67891914 | None:intergenic |
GTTGTTGGTGGTGGCATCAG+TGG | 0.527241 | 1.4:+67888874 | MS.gene21128:CDS |
CAGTGGACTATGTATTGCTC+AGG | 0.529861 | 1.4:+67888891 | MS.gene21128:CDS |
CTACTCTTGAATTACATTGG+AGG | 0.531064 | 1.4:+67893290 | MS.gene21128:CDS |
AGGTCGGAGAAGGGTTTGAG+AGG | 0.531727 | 1.4:-67888677 | None:intergenic |
TTATTACCGTGGAGAGAGAT+GGG | 0.537500 | 1.4:+67888989 | MS.gene21128:CDS |
CCGCAATGGAGCAACGGAGA+CGG | 0.540345 | 1.4:-67888777 | None:intergenic |
CAAAGAAACAACTCCTTCTG+GGG | 0.540704 | 1.4:-67891846 | None:intergenic |
GCAGGTGGACAGTGGTTTGA+AGG | 0.542677 | 1.4:+67889822 | MS.gene21128:intron |
AGAAATTGCGTTTGGCAACA+TGG | 0.544410 | 1.4:-67891638 | None:intergenic |
TGTTGTGGAATGGGAAATTG+AGG | 0.544788 | 1.4:+67889884 | MS.gene21128:CDS |
TCATATACAGGTGTCTATGC+CGG | 0.548115 | 1.4:+67891347 | MS.gene21128:intron |
ATTGGTGGCAAGATCAGGGC+TGG | 0.549710 | 1.4:+67889955 | MS.gene21128:CDS |
ACTCTTGAATTACATTGGAG+GGG | 0.550694 | 1.4:+67893292 | MS.gene21128:CDS |
AAAAGAAAACACACTGGAGG+AGG | 0.550713 | 1.4:-67890003 | None:intergenic |
GAACCCTTCCAGGTGGTGCT+CGG | 0.551325 | 1.4:-67893268 | None:intergenic |
GTCGACTGTGTGGTTGTTGG+TGG | 0.553915 | 1.4:+67888862 | MS.gene21128:CDS |
TCAAAGAAAGGCAAATCAGT+TGG | 0.554397 | 1.4:-67889922 | None:intergenic |
GATTTGGTCAATTGCATCCA+CGG | 0.558189 | 1.4:+67893031 | MS.gene21128:CDS |
GGAGAAGGGTTTGAGAGGGT+GGG | 0.559498 | 1.4:-67888672 | None:intergenic |
TGTCTGGTGTTGCCTTGGGA+AGG | 0.559605 | 1.4:+67894037 | MS.gene21128:CDS |
GAGTATTGGTGGCAAGATCA+GGG | 0.567150 | 1.4:+67889951 | MS.gene21128:CDS |
TTTGAGGGGCTGTTCCTTGG+GGG | 0.567319 | 1.4:+67894006 | MS.gene21128:CDS |
TGCGGTGGATTCCTCCGCAA+TGG | 0.568908 | 1.4:-67888791 | None:intergenic |
TAGGCGTCTGCCAAAGCCAA+AGG | 0.571021 | 1.4:+67891582 | MS.gene21128:intron |
GAGGCGAAAGATCGAGTTGG+TGG | 0.572541 | 1.4:+67888961 | MS.gene21128:CDS |
ATGCACCTAGATTTGTGTTG+TGG | 0.582787 | 1.4:+67889869 | MS.gene21128:CDS |
TAACCGAGCACCACCTGGAA+GGG | 0.584581 | 1.4:+67893265 | MS.gene21128:CDS |
CAATTGCATCCACGGAGCCA+AGG | 0.584598 | 1.4:+67893039 | MS.gene21128:CDS |
AACCACACAGTCGACGGATG+AGG | 0.587789 | 1.4:-67888854 | None:intergenic |
AGGCGTCTGCCAAAGCCAAA+GGG | 0.588421 | 1.4:+67891583 | MS.gene21128:intron |
AATGGTGGTAGCATTATTGG+TGG | 0.588539 | 1.4:+67891428 | MS.gene21128:CDS |
CTAACCGAGCACCACCTGGA+AGG | 0.589476 | 1.4:+67893264 | MS.gene21128:CDS |
AACTGTTGGATCATTCCGGA+AGG | 0.589794 | 1.4:+67891609 | MS.gene21128:CDS |
TGTTGGCAGGTTAGGTAACA+AGG | 0.592433 | 1.4:+67891754 | MS.gene21128:intron |
GTCGACGGATGAGGACTCTC+CGG | 0.593499 | 1.4:-67888845 | None:intergenic |
GCAGCAATGGACTAGCAACA+TGG | 0.594611 | 1.4:-67891901 | None:intergenic |
ACTAGCAACATGGGAAGGAA+TGG | 0.596346 | 1.4:-67891891 | None:intergenic |
CCGTCTCCGTTGCTCCATTG+CGG | 0.597409 | 1.4:+67888777 | MS.gene21128:CDS |
ACCAACAACCACACAGTCGA+CGG | 0.599076 | 1.4:-67888860 | None:intergenic |
TCCCTCAACACACCTTCCCA+AGG | 0.601614 | 1.4:-67894049 | None:intergenic |
CTTTCTACAAAGCATGCTGA+TGG | 0.605299 | 1.4:+67888916 | MS.gene21128:CDS |
TTTGTTTAATTGCAGACGGA+GGG | 0.606182 | 1.4:+67893814 | MS.gene21128:intron |
GTTTGCACTCCTTGGCTCCG+TGG | 0.607612 | 1.4:-67893048 | None:intergenic |
TACTTCAGCTGCTATCTCGT+AGG | 0.608699 | 1.4:-67894073 | None:intergenic |
ACCAACTCGATCTTTCGCCT+CGG | 0.609410 | 1.4:-67888959 | None:intergenic |
GAAAACACACTGGAGGAGGA+GGG | 0.609629 | 1.4:-67889999 | None:intergenic |
CCCCAATGTTGTTGTTACCG+AGG | 0.610569 | 1.4:+67888942 | MS.gene21128:CDS |
GGTCGGAGAAGGGTTTGAGA+GGG | 0.614662 | 1.4:-67888676 | None:intergenic |
ATGGTGAGCATAGGATCAGA+AGG | 0.615324 | 1.4:-67889045 | None:intergenic |
CATACCACCATGGTGAGCAT+AGG | 0.615890 | 1.4:-67889054 | None:intergenic |
ATGGAAACTGCCGCAACTGG+AGG | 0.618307 | 1.4:-67892952 | None:intergenic |
TCTCCGTTGCTCCATTGCGG+AGG | 0.619176 | 1.4:+67888780 | MS.gene21128:CDS |
TGATCCTATGCTCACCATGG+TGG | 0.621350 | 1.4:+67889050 | MS.gene21128:CDS |
ATTCCTCCGCAATGGAGCAA+CGG | 0.621982 | 1.4:-67888783 | None:intergenic |
TGCCAAACGCAATTTCTGCT+AGG | 0.622423 | 1.4:+67891644 | MS.gene21128:CDS |
GTCCTCATCCGTCGACTGTG+TGG | 0.625269 | 1.4:+67888852 | MS.gene21128:CDS |
AAGAACTGTGGAATAGCTTG+AGG | 0.628529 | 1.4:-67893928 | None:intergenic |
TTGATAGATGGTGAGTTGAA+GGG | 0.630684 | 1.4:+67893009 | MS.gene21128:CDS |
TGCAGAGAGTGTACAAGTAG+CGG | 0.631367 | 1.4:+67894109 | MS.gene21128:CDS |
ACGAAGGTGACAGGGTCATG+AGG | 0.634684 | 1.4:+67890137 | MS.gene21128:intron |
GTGGAATGGGAAATTGAGGC+CGG | 0.635091 | 1.4:+67889888 | MS.gene21128:CDS |
AAGAAACCCATCTCTCTCCA+CGG | 0.637483 | 1.4:-67888995 | None:intergenic |
AGGCGAAAGATCGAGTTGGT+GGG | 0.637489 | 1.4:+67888962 | MS.gene21128:CDS |
CAGCAATGGACTAGCAACAT+GGG | 0.637669 | 1.4:-67891900 | None:intergenic |
TGGTGGGAATATTATTACCG+TGG | 0.637750 | 1.4:+67888978 | MS.gene21128:CDS |
TTATTTGTGCAGGTGGACAG+TGG | 0.638748 | 1.4:+67889814 | MS.gene21128:intron |
AATGGACTAGCAACATGGGA+AGG | 0.638945 | 1.4:-67891896 | None:intergenic |
GTTCGTGCGTCGAAATCTTG+GGG | 0.639972 | 1.4:+67890173 | MS.gene21128:CDS |
AGATGTCCAACTAAGAACTG+TGG | 0.655954 | 1.4:-67893940 | None:intergenic |
TTCTGATCCTATGCTCACCA+TGG | 0.662399 | 1.4:+67889047 | MS.gene21128:CDS |
GAAGAAGGTGAGTGTAACCA+TGG | 0.663337 | 1.4:-67888650 | None:intergenic |
AGCAACGGAGACGGAGAATG+GGG | 0.663402 | 1.4:-67888768 | None:intergenic |
ACCGAGGCGAAAGATCGAGT+TGG | 0.669092 | 1.4:+67888958 | MS.gene21128:CDS |
TTGACGTATGAAACCCCAGA+AGG | 0.670583 | 1.4:+67891833 | MS.gene21128:CDS |
ACTGTTGGATCATTCCGGAA+GGG | 0.675135 | 1.4:+67891610 | MS.gene21128:CDS |
TGGAGGCTCGAACAAAATGG+TGG | 0.692440 | 1.4:+67891413 | MS.gene21128:CDS |
TTGATTACAACATACCACCA+TGG | 0.703359 | 1.4:-67889064 | None:intergenic |
CCTCGGTAACAACAACATTG+GGG | 0.719137 | 1.4:-67888942 | None:intergenic |
AAGAGTAGAACCCTTCCAGG+TGG | 0.742286 | 1.4:-67893275 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTAATATTTAAAATAGA+GGG | + | chr1.4:67891065-67891084 | MS.gene21128:intron | 10.0% |
!!! | TTGATTAATATTTAAAATAG+AGG | + | chr1.4:67891064-67891083 | MS.gene21128:intron | 10.0% |
!!! | TTTTTTGTTTTAAATTAAGT+TGG | - | chr1.4:67890857-67890876 | None:intergenic | 10.0% |
!! | AAGAAAATTAAACAAAAGAA+AGG | - | chr1.4:67890033-67890052 | None:intergenic | 15.0% |
!! | ACTATGTTAAATGAAATATA+TGG | + | chr1.4:67890053-67890072 | MS.gene21128:intron | 15.0% |
!! | AGAAAATTAAACAAAAGAAA+GGG | - | chr1.4:67890032-67890051 | None:intergenic | 15.0% |
!! | ATGAAGTAATATTAAAGAAA+AGG | - | chr1.4:67891269-67891288 | None:intergenic | 15.0% |
!! | TTGAAATTGAAATTGAAATT+TGG | + | chr1.4:67889136-67889155 | MS.gene21128:intron | 15.0% |
!!! | AAATTAAGTTGGATATTTTT+TGG | - | chr1.4:67890846-67890865 | None:intergenic | 15.0% |
!!! | AATGAATTTTGATTTTGAAT+TGG | - | chr1.4:67888728-67888747 | None:intergenic | 15.0% |
!!! | AGTTTTATTAGTTGAATATT+TGG | + | chr1.4:67891982-67892001 | MS.gene21128:intron | 15.0% |
!!! | GTCATTTTTTTTAGTAAATT+TGG | + | chr1.4:67889217-67889236 | MS.gene21128:intron | 15.0% |
!!! | TTATGTCTTTTCATATTTAT+CGG | - | chr1.4:67889390-67889409 | None:intergenic | 15.0% |
!!! | TTTTATATAATATAGGAGTT+TGG | + | chr1.4:67890337-67890356 | MS.gene21128:intron | 15.0% |
!! | AAAGTTTCTCTTAAAAATAC+CGG | + | chr1.4:67893982-67894001 | MS.gene21128:CDS | 20.0% |
!! | AAGAAACTTCTTATTCTATT+AGG | - | chr1.4:67890424-67890443 | None:intergenic | 20.0% |
!! | AAGTATGTAAAATATGTAAC+AGG | - | chr1.4:67893716-67893735 | None:intergenic | 20.0% |
!! | ATATGATATAATATTGACGA+AGG | + | chr1.4:67890121-67890140 | MS.gene21128:intron | 20.0% |
!! | TAATGCGAATATTAAAGAAA+AGG | - | chr1.4:67891295-67891314 | None:intergenic | 20.0% |
!! | TACAGTTCATAATTTATACT+TGG | - | chr1.4:67893158-67893177 | None:intergenic | 20.0% |
!! | TATTGCCAATTAAAAAAACA+AGG | - | chr1.4:67892476-67892495 | None:intergenic | 20.0% |
!! | TCATTTATAAGAGGAAAAAT+TGG | - | chr1.4:67891203-67891222 | None:intergenic | 20.0% |
!! | TCATTTCATATCAAAATATC+CGG | - | chr1.4:67890998-67891017 | None:intergenic | 20.0% |
!! | TGTGATTGATATAATAATAC+TGG | - | chr1.4:67892450-67892469 | None:intergenic | 20.0% |
!! | TTAAATGAAATATATGGAAC+TGG | + | chr1.4:67890059-67890078 | MS.gene21128:intron | 20.0% |
!! | TTAACGTATCAAAATAGAAA+AGG | + | chr1.4:67889185-67889204 | MS.gene21128:intron | 20.0% |
!! | TTGAATTTATTATGCAAAAG+TGG | + | chr1.4:67893084-67893103 | MS.gene21128:intron | 20.0% |
!! | TTTCTTTAATATTCGCATTA+AGG | + | chr1.4:67891295-67891314 | MS.gene21128:intron | 20.0% |
!!! | AAATTTCAGTTTTTAAGAGA+CGG | - | chr1.4:67890484-67890503 | None:intergenic | 20.0% |
!!! | ACAAATAAGTTATTTCTGAA+TGG | + | chr1.4:67892817-67892836 | MS.gene21128:intron | 20.0% |
!!! | ATAATTGATTAATTAGCTTC+TGG | + | chr1.4:67889277-67889296 | MS.gene21128:intron | 20.0% |
!!! | ATGGATTTGAAATATTCTTT+GGG | - | chr1.4:67890453-67890472 | None:intergenic | 20.0% |
!!! | CATAACTCTAAAATATTACA+AGG | - | chr1.4:67892568-67892587 | None:intergenic | 20.0% |
!!! | CGGAGATTTTTATATAATAT+AGG | + | chr1.4:67890330-67890349 | MS.gene21128:intron | 20.0% |
!!! | GATTTTTCTATAAAAATCAG+AGG | - | chr1.4:67892203-67892222 | None:intergenic | 20.0% |
!!! | TAGAGATGTTTTTGTAATTT+TGG | + | chr1.4:67889731-67889750 | MS.gene21128:intron | 20.0% |
!!! | TCAGAGTAAATGTATTTTTA+CGG | - | chr1.4:67891506-67891525 | None:intergenic | 20.0% |
!!! | TGAGTTTTAAACAAATGAAA+AGG | - | chr1.4:67890772-67890791 | None:intergenic | 20.0% |
!!! | TTTTGTAATTTTGGAACATT+TGG | + | chr1.4:67889740-67889759 | MS.gene21128:intron | 20.0% |
! | AAAATCAGAGGATGATAAAT+AGG | - | chr1.4:67892191-67892210 | None:intergenic | 25.0% |
! | AAATCAGAGGATGATAAATA+GGG | - | chr1.4:67892190-67892209 | None:intergenic | 25.0% |
! | AAATTGGAAGAAAGGAAAAA+TGG | - | chr1.4:67891187-67891206 | None:intergenic | 25.0% |
! | AAGTAAACAACCGATATTTA+AGG | - | chr1.4:67892710-67892729 | None:intergenic | 25.0% |
! | AAGTTTAAACACTTGAAACA+AGG | - | chr1.4:67893521-67893540 | None:intergenic | 25.0% |
! | AGAACTAGTTCCTTAAATAT+CGG | + | chr1.4:67892697-67892716 | MS.gene21128:intron | 25.0% |
! | ATACTCATTAAGTCAAAGAA+AGG | - | chr1.4:67889937-67889956 | None:intergenic | 25.0% |
! | ATGGTGCATTTATCAAATTA+AGG | - | chr1.4:67891168-67891187 | None:intergenic | 25.0% |
! | ATTTGCATAGATTAAGACTT+TGG | + | chr1.4:67890507-67890526 | MS.gene21128:intron | 25.0% |
! | CAGAATCAAAGACAAAAATT+TGG | + | chr1.4:67892367-67892386 | MS.gene21128:intron | 25.0% |
! | CTAGAATCTTGTGAAAAAAT+TGG | + | chr1.4:67889501-67889520 | MS.gene21128:intron | 25.0% |
! | CTTATGGCTGTTAAAATATT+TGG | + | chr1.4:67892403-67892422 | MS.gene21128:intron | 25.0% |
! | GGTAATGATAACATATTTGT+GGG | + | chr1.4:67893206-67893225 | MS.gene21128:intron | 25.0% |
! | GTAATTATTAAAAAATCGCG+TGG | - | chr1.4:67893132-67893151 | None:intergenic | 25.0% |
! | GTTCATAATTTATACTTGGA+TGG | - | chr1.4:67893154-67893173 | None:intergenic | 25.0% |
! | TATATGATCAAATAACAGAG+AGG | - | chr1.4:67893693-67893712 | None:intergenic | 25.0% |
! | TTAACAATAATTTCACAGTC+AGG | - | chr1.4:67892528-67892547 | None:intergenic | 25.0% |
! | TTTCCAAAAACTTACTACTA+CGG | + | chr1.4:67892282-67892301 | MS.gene21128:intron | 25.0% |
! | TTTGCATAGATTAAGACTTT+GGG | + | chr1.4:67890508-67890527 | MS.gene21128:intron | 25.0% |
!! | ATACATTTACTCTGAGTTTT+TGG | + | chr1.4:67891511-67891530 | MS.gene21128:intron | 25.0% |
!! | GATGGATTTGAAATATTCTT+TGG | - | chr1.4:67890454-67890473 | None:intergenic | 25.0% |
!! | GCTTTCATACTTAATTTTGA+AGG | - | chr1.4:67891377-67891396 | None:intergenic | 25.0% |
!! | TAAAATGTGTTGTGTAGTTT+TGG | + | chr1.4:67893176-67893195 | MS.gene21128:intron | 25.0% |
!! | TAAGGATTTTTCTCAAATCT+CGG | - | chr1.4:67893861-67893880 | None:intergenic | 25.0% |
!! | TGGATTTGAAATATTCTTTG+GGG | - | chr1.4:67890452-67890471 | None:intergenic | 25.0% |
!! | TGGTAATGATAACATATTTG+TGG | + | chr1.4:67893205-67893224 | MS.gene21128:intron | 25.0% |
!! | TTCATATTTATCGGTTAGTT+TGG | - | chr1.4:67889381-67889400 | None:intergenic | 25.0% |
!! | TTCTTTGACTTAATGAGTAT+TGG | + | chr1.4:67889937-67889956 | MS.gene21128:CDS | 25.0% |
!! | TTTCTTTTCTGTTCAACATA+TGG | + | chr1.4:67892224-67892243 | MS.gene21128:intron | 25.0% |
!!! | AAATGTATTTTTACGGATCA+CGG | - | chr1.4:67891499-67891518 | None:intergenic | 25.0% |
!!! | AATTTCAGTTTTTAAGAGAC+GGG | - | chr1.4:67890483-67890502 | None:intergenic | 25.0% |
!!! | CAGTTCCTTGTTTTTTTAAT+TGG | + | chr1.4:67892468-67892487 | MS.gene21128:intron | 25.0% |
!!! | CTGTAAGTTTTTCTAAAAAG+TGG | + | chr1.4:67891933-67891952 | MS.gene21128:intron | 25.0% |
!!! | GAATTTTGATTTTGAATTGG+AGG | - | chr1.4:67888725-67888744 | None:intergenic | 25.0% |
!!! | GCTTTTAAGTATTAGTAAAC+TGG | + | chr1.4:67891793-67891812 | MS.gene21128:CDS | 25.0% |
!!! | TACTACGGATAATTTTGTTT+GGG | + | chr1.4:67892297-67892316 | MS.gene21128:intron | 25.0% |
!!! | TAGTTGTTTTGTTTGGTTTT+TGG | + | chr1.4:67889614-67889633 | MS.gene21128:intron | 25.0% |
AAACACTCAAACAATCAAAG+AGG | - | chr1.4:67892107-67892126 | None:intergenic | 30.0% | |
AAACAGGACAATGAAAAAGT+TGG | - | chr1.4:67890248-67890267 | None:intergenic | 30.0% | |
AAATGCCTCAACTTATATGA+TGG | - | chr1.4:67892865-67892884 | None:intergenic | 30.0% | |
AAGAGGAAAAATTGGAAGAA+AGG | - | chr1.4:67891195-67891214 | None:intergenic | 30.0% | |
AATAGGGAAATGTGAAATCA+TGG | - | chr1.4:67892174-67892193 | None:intergenic | 30.0% | |
ACCCTATAATATTCAGTTCT+TGG | + | chr1.4:67890360-67890379 | MS.gene21128:intron | 30.0% | |
ACTGATTGCAACAATTATGT+AGG | + | chr1.4:67891563-67891582 | MS.gene21128:intron | 30.0% | |
AGAGATATTGAAATGTAGTC+AGG | - | chr1.4:67892891-67892910 | None:intergenic | 30.0% | |
AGGATTTCAAGAGAAGATTT+GGG | - | chr1.4:67890881-67890900 | None:intergenic | 30.0% | |
AGTATTAGTAAACTGGATAG+TGG | + | chr1.4:67891800-67891819 | MS.gene21128:CDS | 30.0% | |
ATTAGTTGAATATTTGGACC+TGG | + | chr1.4:67891988-67892007 | MS.gene21128:intron | 30.0% | |
CACACATAACTCAAACTATA+GGG | + | chr1.4:67891125-67891144 | MS.gene21128:intron | 30.0% | |
CTTAAAAATACCGGATTTGA+GGG | + | chr1.4:67893991-67894010 | MS.gene21128:CDS | 30.0% | |
CTTTGATAAAATCCCAGAAT+TGG | - | chr1.4:67893321-67893340 | None:intergenic | 30.0% | |
GAAAAAATTGGTTACCAAAC+AGG | + | chr1.4:67889513-67889532 | MS.gene21128:intron | 30.0% | |
GATATGAAATGAGACTTTAG+AGG | + | chr1.4:67891006-67891025 | MS.gene21128:intron | 30.0% | |
GCAATTAAACAAAAGGCTTT+AGG | - | chr1.4:67893807-67893826 | None:intergenic | 30.0% | |
GCCAAGAACTGAATATTATA+GGG | - | chr1.4:67890364-67890383 | None:intergenic | 30.0% | |
GTGTTTGAATTTGTAGTGTT+TGG | + | chr1.4:67889338-67889357 | MS.gene21128:intron | 30.0% | |
GTTCTACTCTTGAATTACAT+TGG | + | chr1.4:67893287-67893306 | MS.gene21128:CDS | 30.0% | |
GTTGTTACTATTAATCAGCT+TGG | + | chr1.4:67889674-67889693 | MS.gene21128:intron | 30.0% | |
TACTCTTGAATTACATTGGA+GGG | + | chr1.4:67893291-67893310 | MS.gene21128:CDS | 30.0% | |
TAGGATTTCAAGAGAAGATT+TGG | - | chr1.4:67890882-67890901 | None:intergenic | 30.0% | |
TATCAAGCATTCTGATCTAA+TGG | - | chr1.4:67892995-67893014 | None:intergenic | 30.0% | |
TCACACATAACTCAAACTAT+AGG | + | chr1.4:67891124-67891143 | MS.gene21128:intron | 30.0% | |
TCAGAAGGTTGAAAACTATT+AGG | - | chr1.4:67889033-67889052 | None:intergenic | 30.0% | |
TCTTAAAAATACCGGATTTG+AGG | + | chr1.4:67893990-67894009 | MS.gene21128:CDS | 30.0% | |
TGCTTGTCATCATTTATAAG+AGG | - | chr1.4:67891212-67891231 | None:intergenic | 30.0% | |
TTAAAAATACCGGATTTGAG+GGG | + | chr1.4:67893992-67894011 | MS.gene21128:CDS | 30.0% | |
TTAAAGCTTCATTCGTAATG+TGG | + | chr1.4:67889100-67889119 | MS.gene21128:intron | 30.0% | |
TTAGAAAAACTTACAGACAG+TGG | - | chr1.4:67891929-67891948 | None:intergenic | 30.0% | |
TTAGTTGAATATTTGGACCT+GGG | + | chr1.4:67891989-67892008 | MS.gene21128:intron | 30.0% | |
TTATAGCTTATAAGCTCGTA+TGG | - | chr1.4:67889549-67889568 | None:intergenic | 30.0% | |
! | AACATAAAAGTACAGGTAGT+TGG | - | chr1.4:67890306-67890325 | None:intergenic | 30.0% |
! | AATGATTTTCATCAGAACTC+TGG | + | chr1.4:67893479-67893498 | MS.gene21128:intron | 30.0% |
! | ATTGATTAATTAGCTTCTGG+CGG | + | chr1.4:67889280-67889299 | MS.gene21128:intron | 30.0% |
! | ATTTTGTAGAATGCGAGATT+AGG | - | chr1.4:67890901-67890920 | None:intergenic | 30.0% |
! | CTACTACGGATAATTTTGTT+TGG | + | chr1.4:67892296-67892315 | MS.gene21128:intron | 30.0% |
! | CTGCATATTGTGTTAGTTTA+GGG | + | chr1.4:67890628-67890647 | MS.gene21128:intron | 30.0% |
! | GATATTTTGCCATAGTTGAT+GGG | + | chr1.4:67891533-67891552 | MS.gene21128:intron | 30.0% |
! | GCAATATTTCTATGTTCATG+CGG | + | chr1.4:67890557-67890576 | MS.gene21128:intron | 30.0% |
! | TAAGTATGAAAGCAGCTTTT+GGG | + | chr1.4:67891384-67891403 | MS.gene21128:CDS | 30.0% |
! | TATCCGTAGTAGTAAGTTTT+TGG | - | chr1.4:67892288-67892307 | None:intergenic | 30.0% |
! | TCTGCATATTGTGTTAGTTT+AGG | + | chr1.4:67890627-67890646 | MS.gene21128:intron | 30.0% |
! | TTAAGTATGAAAGCAGCTTT+TGG | + | chr1.4:67891383-67891402 | MS.gene21128:CDS | 30.0% |
! | TTAGGGCGTAATTACAATTT+TGG | + | chr1.4:67890645-67890664 | MS.gene21128:intron | 30.0% |
! | TTGATTCTGAAAACTGTCTA+TGG | - | chr1.4:67892356-67892375 | None:intergenic | 30.0% |
! | TTTTGTAAGTATACACGTCT+TGG | + | chr1.4:67892036-67892055 | MS.gene21128:intron | 30.0% |
!! | AATGTATTTTTACGGATCAC+GGG | - | chr1.4:67891498-67891517 | None:intergenic | 30.0% |
!! | AGACACTTAGTTGTTTTGTT+TGG | + | chr1.4:67889607-67889626 | MS.gene21128:intron | 30.0% |
!! | AGATGCTTAGTTGTTTTGTT+TGG | + | chr1.4:67889640-67889659 | MS.gene21128:intron | 30.0% |
!! | AGCTGATTTTTGTCATATAC+AGG | + | chr1.4:67891335-67891354 | MS.gene21128:intron | 30.0% |
!! | ATAAGTGGCTACACTTTTTA+GGG | + | chr1.4:67890590-67890609 | MS.gene21128:intron | 30.0% |
!! | ATCTTTGAAATCTTGGTCAA+AGG | + | chr1.4:67893584-67893603 | MS.gene21128:intron | 30.0% |
!! | GAAGAGAATCTTTGAAATCT+TGG | + | chr1.4:67893577-67893596 | MS.gene21128:intron | 30.0% |
!! | TTACGAATGAAGCTTTAAAG+AGG | - | chr1.4:67889098-67889117 | None:intergenic | 30.0% |
!! | TTTGACTTAATGAGTATTGG+TGG | + | chr1.4:67889940-67889959 | MS.gene21128:CDS | 30.0% |
!! | TTTGATTTTGAATTGGAGGA+GGG | - | chr1.4:67888721-67888740 | None:intergenic | 30.0% |
!!! | ACATGTTGGTAATATGGTTT+TGG | + | chr1.4:67889786-67889805 | MS.gene21128:intron | 30.0% |
!!! | CAATTCTGGGATTTTATCAA+AGG | + | chr1.4:67893319-67893338 | MS.gene21128:CDS | 30.0% |
!!! | TTTGGTTGTTTTATTTGTGC+AGG | + | chr1.4:67889804-67889823 | MS.gene21128:intron | 30.0% |
!!! | TTTTGATTTTGAATTGGAGG+AGG | - | chr1.4:67888722-67888741 | None:intergenic | 30.0% |
AAAACTAAAGACCTGCAGTA+AGG | - | chr1.4:67892064-67892083 | None:intergenic | 35.0% | |
AAATAAGGCGAAAGTGAAAG+AGG | + | chr1.4:67893406-67893425 | MS.gene21128:intron | 35.0% | |
AACAACTGAGAGTGAAAAAC+AGG | - | chr1.4:67890264-67890283 | None:intergenic | 35.0% | |
AACATATTTGTGGGTTTGAC+AGG | + | chr1.4:67893215-67893234 | MS.gene21128:intron | 35.0% | |
ACCACCTCAAAATCAAATTC+CGG | + | chr1.4:67888826-67888845 | MS.gene21128:CDS | 35.0% | |
ACTCTTGAATTACATTGGAG+GGG | + | chr1.4:67893292-67893311 | MS.gene21128:CDS | 35.0% | |
AGATCAGAATGCTTGATAGA+TGG | + | chr1.4:67892997-67893016 | MS.gene21128:CDS | 35.0% | |
ATAATATTGACGAAGGTGAC+AGG | + | chr1.4:67890128-67890147 | MS.gene21128:intron | 35.0% | |
ATCAAAAGAAAACACACTGG+AGG | - | chr1.4:67890009-67890028 | None:intergenic | 35.0% | |
ATGAAATATATGGAACTGGC+AGG | + | chr1.4:67890063-67890082 | MS.gene21128:intron | 35.0% | |
ATGACAAAAATCAGCTAAGC+AGG | - | chr1.4:67891331-67891350 | None:intergenic | 35.0% | |
ATTTCTGAATGGCCAATTTC+TGG | + | chr1.4:67892828-67892847 | MS.gene21128:intron | 35.0% | |
CAAAAAACCCGTAATGTTTC+CGG | + | chr1.4:67892640-67892659 | MS.gene21128:intron | 35.0% | |
CAAAATGGTGGTAGCATTAT+TGG | + | chr1.4:67891425-67891444 | MS.gene21128:CDS | 35.0% | |
CCAAAAAGCAGTTATCATGA+TGG | - | chr1.4:67890401-67890420 | None:intergenic | 35.0% | |
CCTGAGCATTTGGATTTATA+AGG | - | chr1.4:67893879-67893898 | None:intergenic | 35.0% | |
CCTTATAAATCCAAATGCTC+AGG | + | chr1.4:67893876-67893895 | MS.gene21128:CDS | 35.0% | |
CGCCAAGAACTGAATATTAT+AGG | - | chr1.4:67890365-67890384 | None:intergenic | 35.0% | |
CTACTCTTGAATTACATTGG+AGG | + | chr1.4:67893290-67893309 | MS.gene21128:CDS | 35.0% | |
CTAGATTTGTGTTGTGGAAT+GGG | + | chr1.4:67889875-67889894 | MS.gene21128:CDS | 35.0% | |
CTATATAGCTTCTGCTATGT+AGG | - | chr1.4:67892679-67892698 | None:intergenic | 35.0% | |
GTAAACTAACCCATCAACTA+TGG | - | chr1.4:67891545-67891564 | None:intergenic | 35.0% | |
GTAACAAGGTGAAGTTATCT+TGG | + | chr1.4:67891768-67891787 | MS.gene21128:CDS | 35.0% | |
GTTACCAAACAGGTCTAATT+TGG | + | chr1.4:67889523-67889542 | MS.gene21128:intron | 35.0% | |
TAATATTGACGAAGGTGACA+GGG | + | chr1.4:67890129-67890148 | MS.gene21128:intron | 35.0% | |
TCAAAGAAAGGCAAATCAGT+TGG | - | chr1.4:67889925-67889944 | None:intergenic | 35.0% | |
TCCGTCTGCAATTAAACAAA+AGG | - | chr1.4:67893814-67893833 | None:intergenic | 35.0% | |
TGCAATTGTTTGAGCTGTTA+TGG | + | chr1.4:67893379-67893398 | MS.gene21128:intron | 35.0% | |
TGCGGAATTTGTAACATAAG+TGG | + | chr1.4:67890575-67890594 | MS.gene21128:intron | 35.0% | |
TGGTGAAACAACTAGAACAA+TGG | - | chr1.4:67891689-67891708 | None:intergenic | 35.0% | |
TTAGTGATTAGCAGGTTCTA+GGG | + | chr1.4:67892326-67892345 | MS.gene21128:intron | 35.0% | |
TTCAATAAGACAAATGACCC+AGG | - | chr1.4:67892009-67892028 | None:intergenic | 35.0% | |
TTGATTACAACATACCACCA+TGG | - | chr1.4:67889067-67889086 | None:intergenic | 35.0% | |
TTTAGGCTCTGTCAAAATAG+CGG | + | chr1.4:67889254-67889273 | MS.gene21128:intron | 35.0% | |
TTTAGTGATTAGCAGGTTCT+AGG | + | chr1.4:67892325-67892344 | MS.gene21128:intron | 35.0% | |
TTTGTTTAATTGCAGACGGA+GGG | + | chr1.4:67893814-67893833 | MS.gene21128:intron | 35.0% | |
! | ACTGGTTTCTTCAGACTTAT+AGG | - | chr1.4:67892432-67892451 | None:intergenic | 35.0% |
! | AGCTGTTATGGTGTCAAATA+AGG | + | chr1.4:67893391-67893410 | MS.gene21128:intron | 35.0% |
! | CATTTTGAGCTTATAGCAGA+TGG | - | chr1.4:67889573-67889592 | None:intergenic | 35.0% |
! | CTACCTGTACTTTTATGTTC+TGG | + | chr1.4:67890307-67890326 | MS.gene21128:intron | 35.0% |
! | CTTCATCATGTCTTGATGAT+TGG | + | chr1.4:67893647-67893666 | MS.gene21128:intron | 35.0% |
! | GGATATTTTGCCATAGTTGA+TGG | + | chr1.4:67891532-67891551 | MS.gene21128:intron | 35.0% |
! | GTTTGAGTTATGTGTGACTT+TGG | - | chr1.4:67891121-67891140 | None:intergenic | 35.0% |
! | TCTAATGGCTTCTTTTGGAT+AGG | - | chr1.4:67892980-67892999 | None:intergenic | 35.0% |
! | TCTGATCTAATGGCTTCTTT+TGG | - | chr1.4:67892985-67893004 | None:intergenic | 35.0% |
! | TTCTTTTCCTTCGTTGTTGT+TGG | + | chr1.4:67893429-67893448 | MS.gene21128:intron | 35.0% |
! | TTGATAGATGGTGAGTTGAA+GGG | + | chr1.4:67893009-67893028 | MS.gene21128:CDS | 35.0% |
! | TTGATTTTGAATTGGAGGAG+GGG | - | chr1.4:67888720-67888739 | None:intergenic | 35.0% |
!! | AAGCTTTAAGCTACTTGAAG+TGG | + | chr1.4:67889444-67889463 | MS.gene21128:intron | 35.0% |
!! | ACTTAATTTTGAAGGATCGC+CGG | - | chr1.4:67891369-67891388 | None:intergenic | 35.0% |
!! | ATGTATTTTTACGGATCACG+GGG | - | chr1.4:67891497-67891516 | None:intergenic | 35.0% |
!! | CATAAGTGGCTACACTTTTT+AGG | + | chr1.4:67890589-67890608 | MS.gene21128:intron | 35.0% |
!! | CCATCATGATAACTGCTTTT+TGG | + | chr1.4:67890398-67890417 | MS.gene21128:intron | 35.0% |
!! | GCCTTTTGTTTAATTGCAGA+CGG | + | chr1.4:67893810-67893829 | MS.gene21128:intron | 35.0% |
!! | TCTGGGATTTTATCAAAGGT+AGG | + | chr1.4:67893323-67893342 | MS.gene21128:intron | 35.0% |
!! | TTTGAAGGACGATCTTGTTT+TGG | + | chr1.4:67889837-67889856 | MS.gene21128:CDS | 35.0% |
!! | TTTTGTTTAATTGCAGACGG+AGG | + | chr1.4:67893813-67893832 | MS.gene21128:intron | 35.0% |
!!! | ATGTGTTGTGTAGTTTTGGA+AGG | + | chr1.4:67893180-67893199 | MS.gene21128:intron | 35.0% |
!!! | ATTACGGGTTTTTTGCATAC+AGG | - | chr1.4:67892635-67892654 | None:intergenic | 35.0% |
!!! | GATTTTGAGGTGGTTTTAGT+CGG | - | chr1.4:67888820-67888839 | None:intergenic | 35.0% |
!!! | GGTTTTGTTTAGTGATTAGC+AGG | + | chr1.4:67892318-67892337 | MS.gene21128:intron | 35.0% |
!!! | GTCTCTGTAGTTTTTTTCGA+GGG | - | chr1.4:67891099-67891118 | None:intergenic | 35.0% |
!!! | TTGAAGGACGATCTTGTTTT+GGG | + | chr1.4:67889838-67889857 | MS.gene21128:CDS | 35.0% |
!!! | TTGTGTAGTTTTGGAAGGTA+TGG | + | chr1.4:67893185-67893204 | MS.gene21128:intron | 35.0% |
AAAAGAAAACACACTGGAGG+AGG | - | chr1.4:67890006-67890025 | None:intergenic | 40.0% | |
AACACAAATCTAGGTGCATC+AGG | - | chr1.4:67889868-67889887 | None:intergenic | 40.0% | |
AACACTTGAAACAAGGTCAC+TGG | - | chr1.4:67893514-67893533 | None:intergenic | 40.0% | |
AAGAACTGTGGAATAGCTTG+AGG | - | chr1.4:67893931-67893950 | None:intergenic | 40.0% | |
AATGGTGGTAGCATTATTGG+TGG | + | chr1.4:67891428-67891447 | MS.gene21128:CDS | 40.0% | |
ACAATTGGATCCTGAGCATT+TGG | - | chr1.4:67893889-67893908 | None:intergenic | 40.0% | |
ACACCTAGTTTATCCGCTAT+CGG | - | chr1.4:67889322-67889341 | None:intergenic | 40.0% | |
ACTCTAACCCCCAAAACAAT+TGG | - | chr1.4:67893904-67893923 | None:intergenic | 40.0% | |
ACTGGCAGGATAAATAATGC+AGG | + | chr1.4:67890077-67890096 | MS.gene21128:intron | 40.0% | |
AGAAATTGCGTTTGGCAACA+TGG | - | chr1.4:67891641-67891660 | None:intergenic | 40.0% | |
AGAGCCTAAATACACATTCG+AGG | - | chr1.4:67889244-67889263 | None:intergenic | 40.0% | |
AGATGTCCAACTAAGAACTG+TGG | - | chr1.4:67893943-67893962 | None:intergenic | 40.0% | |
AGTCGCCATCATATAAGTTG+AGG | + | chr1.4:67892857-67892876 | MS.gene21128:intron | 40.0% | |
ATGCACCTAGATTTGTGTTG+TGG | + | chr1.4:67889869-67889888 | MS.gene21128:CDS | 40.0% | |
ATGGCCAAATTAGACCTGTT+TGG | - | chr1.4:67889530-67889549 | None:intergenic | 40.0% | |
ATTATTACCGTGGAGAGAGA+TGG | + | chr1.4:67888988-67889007 | MS.gene21128:CDS | 40.0% | |
CAAAGAAACAACTCCTTCTG+GGG | - | chr1.4:67891849-67891868 | None:intergenic | 40.0% | |
CAGGACAATGAAAAAGTTGG+TGG | - | chr1.4:67890245-67890264 | None:intergenic | 40.0% | |
CAGTCAGGCACAAATAAACA+AGG | - | chr1.4:67892513-67892532 | None:intergenic | 40.0% | |
CCATATTACCAACATGTGTG+AGG | - | chr1.4:67889783-67889802 | None:intergenic | 40.0% | |
CCATTCCACAACACAAATCT+AGG | - | chr1.4:67889877-67889896 | None:intergenic | 40.0% | |
CCTAGATTTGTGTTGTGGAA+TGG | + | chr1.4:67889874-67889893 | MS.gene21128:CDS | 40.0% | |
CTGAACAAAAAGGCTCTATC+AGG | - | chr1.4:67890215-67890234 | None:intergenic | 40.0% | |
CTTCTGCTATGTAGGATCTA+AGG | - | chr1.4:67892671-67892690 | None:intergenic | 40.0% | |
CTTTCTACAAAGCATGCTGA+TGG | + | chr1.4:67888916-67888935 | MS.gene21128:CDS | 40.0% | |
GCAAAGAAACAACTCCTTCT+GGG | - | chr1.4:67891850-67891869 | None:intergenic | 40.0% | |
GCTATGTAGGATCTAAGGAA+TGG | - | chr1.4:67892666-67892685 | None:intergenic | 40.0% | |
GCTATTCCACAGTTCTTAGT+TGG | + | chr1.4:67893934-67893953 | MS.gene21128:CDS | 40.0% | |
GGGATCAAAAGAAAACACAC+TGG | - | chr1.4:67890012-67890031 | None:intergenic | 40.0% | |
GGTTGTTTACTTCAAAGCCA+GGG | + | chr1.4:67892718-67892737 | MS.gene21128:intron | 40.0% | |
GTCAAACTGTTGGATCATTC+CGG | + | chr1.4:67891605-67891624 | MS.gene21128:CDS | 40.0% | |
GTTATGTAGTTGTAGTGCAG+TGG | + | chr1.4:67892582-67892601 | MS.gene21128:intron | 40.0% | |
TACCTAATGTTTGCACTCCT+TGG | - | chr1.4:67893059-67893078 | None:intergenic | 40.0% | |
TACCTAGCAGAAATTGCGTT+TGG | - | chr1.4:67891649-67891668 | None:intergenic | 40.0% | |
TAGTCGTTCTTTACTATCCC+TGG | - | chr1.4:67893460-67893479 | None:intergenic | 40.0% | |
TATCAGGCGTTCAAAAACCT+CGG | - | chr1.4:67890199-67890218 | None:intergenic | 40.0% | |
TATTACCAACATGTGTGAGG+CGG | - | chr1.4:67889780-67889799 | None:intergenic | 40.0% | |
TCAGTTCTTGGCGAATGAAA+TGG | + | chr1.4:67890372-67890391 | MS.gene21128:intron | 40.0% | |
TCATATACAGGTGTCTATGC+CGG | + | chr1.4:67891347-67891366 | MS.gene21128:intron | 40.0% | |
TCTCTCCTGTATTGCTTTGA+AGG | - | chr1.4:67891456-67891475 | None:intergenic | 40.0% | |
TGCAAAGAAACAACTCCTTC+TGG | - | chr1.4:67891851-67891870 | None:intergenic | 40.0% | |
TGGTCCTCGAATGTGTATTT+AGG | + | chr1.4:67889237-67889256 | MS.gene21128:intron | 40.0% | |
TGGTGGGAATATTATTACCG+TGG | + | chr1.4:67888978-67888997 | MS.gene21128:CDS | 40.0% | |
TGTTGTGGAATGGGAAATTG+AGG | + | chr1.4:67889884-67889903 | MS.gene21128:CDS | 40.0% | |
TGTTTCACCAGTATTCACGT+TGG | + | chr1.4:67891699-67891718 | MS.gene21128:intron | 40.0% | |
TTACAGGAACACGATTCACT+AGG | - | chr1.4:67891732-67891751 | None:intergenic | 40.0% | |
TTATTACCGTGGAGAGAGAT+GGG | + | chr1.4:67888989-67889008 | MS.gene21128:CDS | 40.0% | |
! | AACAAATGAAAAGGAGCGCA+AGG | - | chr1.4:67890763-67890782 | None:intergenic | 40.0% |
! | CATCATGTCTTGATGATTGG+TGG | + | chr1.4:67893650-67893669 | MS.gene21128:intron | 40.0% |
! | CCTGTACTTTTATGTTCTGG+CGG | + | chr1.4:67890310-67890329 | MS.gene21128:intron | 40.0% |
! | CTGATAGAGCCTTTTTGTTC+AGG | + | chr1.4:67890213-67890232 | MS.gene21128:CDS | 40.0% |
! | CTTGATAGATGGTGAGTTGA+AGG | + | chr1.4:67893008-67893027 | MS.gene21128:CDS | 40.0% |
! | GATTTGGTCAATTGCATCCA+CGG | + | chr1.4:67893031-67893050 | MS.gene21128:CDS | 40.0% |
! | GCTCAGGATCCAATTGTTTT+GGG | + | chr1.4:67893892-67893911 | MS.gene21128:CDS | 40.0% |
! | GCTTGAGCTATGTGTGATTT+TGG | + | chr1.4:67890676-67890695 | MS.gene21128:intron | 40.0% |
! | GGCTTCTTTTGGATAGGAAA+TGG | - | chr1.4:67892974-67892993 | None:intergenic | 40.0% |
! | TCTTGATGATTGGTGGTTCT+GGG | + | chr1.4:67893657-67893676 | MS.gene21128:intron | 40.0% |
! | TGCTCAGGATCCAATTGTTT+TGG | + | chr1.4:67893891-67893910 | MS.gene21128:CDS | 40.0% |
!! | CAGTTTTTAAGAGACGGGTT+GGG | - | chr1.4:67890478-67890497 | None:intergenic | 40.0% |
!! | CCTCACACATGTTGGTAATA+TGG | + | chr1.4:67889780-67889799 | MS.gene21128:intron | 40.0% |
!! | CTCAGGATCCAATTGTTTTG+GGG | + | chr1.4:67893893-67893912 | MS.gene21128:CDS | 40.0% |
!! | CTCTCCGGAATTTGATTTTG+AGG | - | chr1.4:67888833-67888852 | None:intergenic | 40.0% |
!! | CTTCCATAGAAGAGTACTAC+AGG | + | chr1.4:67893613-67893632 | MS.gene21128:intron | 40.0% |
!! | TCAGTTTTTAAGAGACGGGT+TGG | - | chr1.4:67890479-67890498 | None:intergenic | 40.0% |
!! | TCCGGAATTTGATTTTGAGG+TGG | - | chr1.4:67888830-67888849 | None:intergenic | 40.0% |
!!! | AGTTTTTAAGAGACGGGTTG+GGG | - | chr1.4:67890477-67890496 | None:intergenic | 40.0% |
!!! | GGTCTCTGTAGTTTTTTTCG+AGG | - | chr1.4:67891100-67891119 | None:intergenic | 40.0% |
!!! | GGTTGTTTTATTTGTGCAGG+TGG | + | chr1.4:67889807-67889826 | MS.gene21128:intron | 40.0% |
!!! | TCAGGATCCAATTGTTTTGG+GGG | + | chr1.4:67893894-67893913 | MS.gene21128:CDS | 40.0% |
AACATCGCCAACGTGAATAC+TGG | - | chr1.4:67891709-67891728 | None:intergenic | 45.0% | |
AACTGTTGGATCATTCCGGA+AGG | + | chr1.4:67891609-67891628 | MS.gene21128:CDS | 45.0% | |
AAGAAACCCATCTCTCTCCA+CGG | - | chr1.4:67888998-67889017 | None:intergenic | 45.0% | |
AAGCCAAAGCCTATCTCACA+AGG | - | chr1.4:67892767-67892786 | None:intergenic | 45.0% | |
AAGCCAAAGGGTCAAACTGT+TGG | + | chr1.4:67891595-67891614 | MS.gene21128:CDS | 45.0% | |
AATCGCGTGGCAACTTAAAG+TGG | - | chr1.4:67893119-67893138 | None:intergenic | 45.0% | |
ACTAGCAACATGGGAAGGAA+TGG | - | chr1.4:67891894-67891913 | None:intergenic | 45.0% | |
ACTGTTGGATCATTCCGGAA+GGG | + | chr1.4:67891610-67891629 | MS.gene21128:CDS | 45.0% | |
AGCCAAAGCCTATCTCACAA+GGG | - | chr1.4:67892766-67892785 | None:intergenic | 45.0% | |
AGGAATGGCCGGAAACATTA+CGG | - | chr1.4:67892651-67892670 | None:intergenic | 45.0% | |
AGTACAGGTAGTTGGCTGAA+AGG | - | chr1.4:67890298-67890317 | None:intergenic | 45.0% | |
AGTTCGTGCGTCGAAATCTT+GGG | + | chr1.4:67890172-67890191 | MS.gene21128:CDS | 45.0% | |
ATCCCTTGTGAGATAGGCTT+TGG | + | chr1.4:67892761-67892780 | MS.gene21128:intron | 45.0% | |
ATCGTGTTCCTGTAACCTGT+TGG | + | chr1.4:67891737-67891756 | MS.gene21128:intron | 45.0% | |
ATGGTGAGCATAGGATCAGA+AGG | - | chr1.4:67889048-67889067 | None:intergenic | 45.0% | |
CATCACATCCCTTGTGAGAT+AGG | + | chr1.4:67892755-67892774 | MS.gene21128:intron | 45.0% | |
CCTCGGTAACAACAACATTG+GGG | - | chr1.4:67888945-67888964 | None:intergenic | 45.0% | |
CGGTTGTTTACTTCAAAGCC+AGG | + | chr1.4:67892717-67892736 | MS.gene21128:intron | 45.0% | |
GACATGATGAAGCAGTACAG+CGG | - | chr1.4:67893639-67893658 | None:intergenic | 45.0% | |
GATCCAACAGTTTGACCCTT+TGG | - | chr1.4:67891601-67891620 | None:intergenic | 45.0% | |
GCCTCGGTAACAACAACATT+GGG | - | chr1.4:67888946-67888965 | None:intergenic | 45.0% | |
GCGACTATCATGCCAGAAAT+TGG | - | chr1.4:67892843-67892862 | None:intergenic | 45.0% | |
GGAGTTTCCAACAACAACGA+AGG | - | chr1.4:67893439-67893458 | None:intergenic | 45.0% | |
GTAGATAAGCTAGCCGATAG+CGG | + | chr1.4:67889306-67889325 | MS.gene21128:intron | 45.0% | |
TACTTCAAAGCCAGGGTTTC+AGG | + | chr1.4:67892725-67892744 | MS.gene21128:intron | 45.0% | |
TACTTCAGCTGCTATCTCGT+AGG | - | chr1.4:67894076-67894095 | None:intergenic | 45.0% | |
TGCCAAACGCAATTTCTGCT+AGG | + | chr1.4:67891644-67891663 | MS.gene21128:CDS | 45.0% | |
TGGAGCCTTCAAAGCAATAC+AGG | + | chr1.4:67891448-67891467 | MS.gene21128:CDS | 45.0% | |
TGTAGGATCTAAGGAATGGC+CGG | - | chr1.4:67892662-67892681 | None:intergenic | 45.0% | |
TGTTGGCAGGTTAGGTAACA+AGG | + | chr1.4:67891754-67891773 | MS.gene21128:intron | 45.0% | |
TTATTTGTGCAGGTGGACAG+TGG | + | chr1.4:67889814-67889833 | MS.gene21128:intron | 45.0% | |
TTCAAGAGTAGAACCCTTCC+AGG | - | chr1.4:67893281-67893300 | None:intergenic | 45.0% | |
TTCTGATCCTATGCTCACCA+TGG | + | chr1.4:67889047-67889066 | MS.gene21128:CDS | 45.0% | |
TTGAATTGGAGGAGGGGAAA+GGG | - | chr1.4:67888714-67888733 | None:intergenic | 45.0% | |
TTGACGTATGAAACCCCAGA+AGG | + | chr1.4:67891833-67891852 | MS.gene21128:CDS | 45.0% | |
TTGTTACCTAACCTGCCAAC+AGG | - | chr1.4:67891755-67891774 | None:intergenic | 45.0% | |
TTTGAATTGGAGGAGGGGAA+AGG | - | chr1.4:67888715-67888734 | None:intergenic | 45.0% | |
! | ACAGTTTGACCCTTTGGCTT+TGG | - | chr1.4:67891595-67891614 | None:intergenic | 45.0% |
! | AGCCAAGGAGTGCAAACATT+AGG | + | chr1.4:67893054-67893073 | MS.gene21128:CDS | 45.0% |
! | CCGCCAGAACATAAAAGTAC+AGG | - | chr1.4:67890313-67890332 | None:intergenic | 45.0% |
! | CGTTGTTGTTGGAAACTCCA+GGG | + | chr1.4:67893440-67893459 | MS.gene21128:intron | 45.0% |
! | GAAGTAAGCTTGTCGCTTCT+TGG | - | chr1.4:67891241-67891260 | None:intergenic | 45.0% |
! | GATGGGTTTCTTTGGGAAGA+AGG | + | chr1.4:67889006-67889025 | MS.gene21128:CDS | 45.0% |
! | GATGGTGAGTTGAAGGGATT+TGG | + | chr1.4:67893015-67893034 | MS.gene21128:CDS | 45.0% |
! | GGAGAGAGATGGGTTTCTTT+GGG | + | chr1.4:67888999-67889018 | MS.gene21128:CDS | 45.0% |
! | GTCTTGATGATTGGTGGTTC+TGG | + | chr1.4:67893656-67893675 | MS.gene21128:intron | 45.0% |
! | TCGTTGTTGTTGGAAACTCC+AGG | + | chr1.4:67893439-67893458 | MS.gene21128:intron | 45.0% |
! | TGGAGAGAGATGGGTTTCTT+TGG | + | chr1.4:67888998-67889017 | MS.gene21128:CDS | 45.0% |
!! | AAGCAGCTTTTGGGAAAGTG+TGG | + | chr1.4:67891393-67891412 | MS.gene21128:CDS | 45.0% |
!! | AATGGACTAGCAACATGGGA+AGG | - | chr1.4:67891899-67891918 | None:intergenic | 45.0% |
!! | CAGCAATGGACTAGCAACAT+GGG | - | chr1.4:67891903-67891922 | None:intergenic | 45.0% |
!! | CAGTGGACTATGTATTGCTC+AGG | + | chr1.4:67888891-67888910 | MS.gene21128:CDS | 45.0% |
!! | GAGTATTGGTGGCAAGATCA+GGG | + | chr1.4:67889951-67889970 | MS.gene21128:CDS | 45.0% |
!! | TAGCCGATAGCGGATAAACT+AGG | + | chr1.4:67889316-67889335 | MS.gene21128:intron | 45.0% |
!! | TATGTGTCTGGTGTTGCCTT+GGG | + | chr1.4:67894033-67894052 | MS.gene21128:CDS | 45.0% |
!! | TATTTTTACGGATCACGGGG+TGG | - | chr1.4:67891494-67891513 | None:intergenic | 45.0% |
!! | TGAGTATTGGTGGCAAGATC+AGG | + | chr1.4:67889950-67889969 | MS.gene21128:CDS | 45.0% |
!! | TGGCTCTGACCTGAACAAAA+AGG | - | chr1.4:67890225-67890244 | None:intergenic | 45.0% |
!!! | GATTGGTGGTTCTGGGTTTT+AGG | + | chr1.4:67893664-67893683 | MS.gene21128:intron | 45.0% |
!!! | GTTTTTAAGAGACGGGTTGG+GGG | - | chr1.4:67890476-67890495 | None:intergenic | 45.0% |
!!! | TTGTTTTGGGGGTTAGAGTG+TGG | + | chr1.4:67893905-67893924 | MS.gene21128:CDS | 45.0% |
!!! | TTTTAAATATTAATCAAATA+TGG | - | chr1.4:67891061-67891080 | None:intergenic | 5.0% |
!!! | TTTTCTAAAAAAAAAAAATA+TGG | + | chr1.4:67890535-67890554 | MS.gene21128:intron | 5.0% |
AAACAAGGTCACTGGACGTC+TGG | - | chr1.4:67893506-67893525 | None:intergenic | 50.0% | |
AAAGCCAGGGTTTCAGGATC+AGG | + | chr1.4:67892731-67892750 | MS.gene21128:intron | 50.0% | |
AAATATCCGGCGCTCAACGA+TGG | - | chr1.4:67890985-67891004 | None:intergenic | 50.0% | |
AAGAGTAGAACCCTTCCAGG+TGG | - | chr1.4:67893278-67893297 | None:intergenic | 50.0% | |
AAGGAACAGCCCCTCAAATC+CGG | - | chr1.4:67894004-67894023 | None:intergenic | 50.0% | |
AAGGGGAATGGAGATGAGGT+CGG | - | chr1.4:67888696-67888715 | None:intergenic | 50.0% | |
AATGGAGATGAGGTCGGAGA+AGG | - | chr1.4:67888690-67888709 | None:intergenic | 50.0% | |
ACAGACAGTGGTTGCAGCAA+TGG | - | chr1.4:67891917-67891936 | None:intergenic | 50.0% | |
ACCAACAACCACACAGTCGA+CGG | - | chr1.4:67888863-67888882 | None:intergenic | 50.0% | |
ACCAACTCGATCTTTCGCCT+CGG | - | chr1.4:67888962-67888981 | None:intergenic | 50.0% | |
ACGTCTTGGTACCTTACTGC+AGG | + | chr1.4:67892050-67892069 | MS.gene21128:intron | 50.0% | |
AGAAAACACACTGGAGGAGG+AGG | - | chr1.4:67890003-67890022 | None:intergenic | 50.0% | |
ATGGAGATGAGGTCGGAGAA+GGG | - | chr1.4:67888689-67888708 | None:intergenic | 50.0% | |
ATGTCCTGATCCTGAAACCC+TGG | - | chr1.4:67892738-67892757 | None:intergenic | 50.0% | |
ATTCCTCCGCAATGGAGCAA+CGG | - | chr1.4:67888786-67888805 | None:intergenic | 50.0% | |
ATTGGAGGGGCTACCAATTC+TGG | + | chr1.4:67893305-67893324 | MS.gene21128:CDS | 50.0% | |
ATTTGAGGGGCTGTTCCTTG+GGG | + | chr1.4:67894005-67894024 | MS.gene21128:CDS | 50.0% | |
CAGCCATAAGCTCTTGCAGT+AGG | - | chr1.4:67892393-67892412 | None:intergenic | 50.0% | |
CATACCACCATGGTGAGCAT+AGG | - | chr1.4:67889057-67889076 | None:intergenic | 50.0% | |
CGCCTCGGTAACAACAACAT+TGG | - | chr1.4:67888947-67888966 | None:intergenic | 50.0% | |
CGGCCTGTAGTACTCTTCTA+TGG | - | chr1.4:67893619-67893638 | None:intergenic | 50.0% | |
CGTAATGTGGCGCATGCAAT+TGG | + | chr1.4:67889113-67889132 | MS.gene21128:intron | 50.0% | |
CTAACCTGCCAACAGGTTAC+AGG | - | chr1.4:67891748-67891767 | None:intergenic | 50.0% | |
CTGTAACCTGTTGGCAGGTT+AGG | + | chr1.4:67891746-67891765 | MS.gene21128:intron | 50.0% | |
GAAAACACACTGGAGGAGGA+GGG | - | chr1.4:67890002-67890021 | None:intergenic | 50.0% | |
GAAATGGAAACTGCCGCAAC+TGG | - | chr1.4:67892958-67892977 | None:intergenic | 50.0% | |
GAGTTCGTGCGTCGAAATCT+TGG | + | chr1.4:67890171-67890190 | MS.gene21128:CDS | 50.0% | |
GATTTGAGGGGCTGTTCCTT+GGG | + | chr1.4:67894004-67894023 | MS.gene21128:CDS | 50.0% | |
GCAACATGGTAAGTCCCTTC+CGG | - | chr1.4:67891627-67891646 | None:intergenic | 50.0% | |
GGAATGGCCGGAAACATTAC+GGG | - | chr1.4:67892650-67892669 | None:intergenic | 50.0% | |
GTGACAGGGTCATGAGGAAT+CGG | + | chr1.4:67890143-67890162 | MS.gene21128:intron | 50.0% | |
GTGGAATGGGAAATTGAGGC+CGG | + | chr1.4:67889888-67889907 | MS.gene21128:CDS | 50.0% | |
GTGTGGAGGCTCGAACAAAA+TGG | + | chr1.4:67891410-67891429 | MS.gene21128:CDS | 50.0% | |
GTTCGTGCGTCGAAATCTTG+GGG | + | chr1.4:67890173-67890192 | MS.gene21128:CDS | 50.0% | |
TCAAATCCATCGTTGAGCGC+CGG | + | chr1.4:67890976-67890995 | MS.gene21128:intron | 50.0% | |
TGAATTGGAGGAGGGGAAAG+GGG | - | chr1.4:67888713-67888732 | None:intergenic | 50.0% | |
TGATCCTATGCTCACCATGG+TGG | + | chr1.4:67889050-67889069 | MS.gene21128:CDS | 50.0% | |
TGGAGGCTCGAACAAAATGG+TGG | + | chr1.4:67891413-67891432 | MS.gene21128:CDS | 50.0% | |
TGGCCTACTGCAAGAGCTTA+TGG | + | chr1.4:67892387-67892406 | MS.gene21128:intron | 50.0% | |
TGGTGCTCGGTTAGGGAAAA+GGG | - | chr1.4:67893258-67893277 | None:intergenic | 50.0% | |
TGTTCCTGTAACCTGTTGGC+AGG | + | chr1.4:67891741-67891760 | MS.gene21128:intron | 50.0% | |
TTGGAGGGGCTACCAATTCT+GGG | + | chr1.4:67893306-67893325 | MS.gene21128:CDS | 50.0% | |
! | CCCCAATGTTGTTGTTACCG+AGG | + | chr1.4:67888942-67888961 | MS.gene21128:CDS | 50.0% |
!! | AGGCGAAAGATCGAGTTGGT+GGG | + | chr1.4:67888962-67888981 | MS.gene21128:CDS | 50.0% |
!! | CAGCTTTTGGGAAAGTGTGG+AGG | + | chr1.4:67891396-67891415 | MS.gene21128:CDS | 50.0% |
!! | CTATGTGTCTGGTGTTGCCT+TGG | + | chr1.4:67894032-67894051 | MS.gene21128:CDS | 50.0% |
!! | GCAGCAATGGACTAGCAACA+TGG | - | chr1.4:67891904-67891923 | None:intergenic | 50.0% |
!! | GGCAAATCAGTTGGCTTTCC+CGG | - | chr1.4:67889916-67889935 | None:intergenic | 50.0% |
!!! | GGTGGTTTTAGTCGGAGATG+CGG | - | chr1.4:67888812-67888831 | None:intergenic | 50.0% |
AACCACACAGTCGACGGATG+AGG | - | chr1.4:67888857-67888876 | None:intergenic | 55.0% | |
ACCGAGGCGAAAGATCGAGT+TGG | + | chr1.4:67888958-67888977 | MS.gene21128:CDS | 55.0% | |
ACGAAGGTGACAGGGTCATG+AGG | + | chr1.4:67890137-67890156 | MS.gene21128:intron | 55.0% | |
AGCAACGGAGACGGAGAATG+GGG | - | chr1.4:67888771-67888790 | None:intergenic | 55.0% | |
AGGCGTCTGCCAAAGCCAAA+GGG | + | chr1.4:67891583-67891602 | MS.gene21128:intron | 55.0% | |
AGGTCGGAGAAGGGTTTGAG+AGG | - | chr1.4:67888680-67888699 | None:intergenic | 55.0% | |
ATGGAAACTGCCGCAACTGG+AGG | - | chr1.4:67892955-67892974 | None:intergenic | 55.0% | |
CAATTGCATCCACGGAGCCA+AGG | + | chr1.4:67893039-67893058 | MS.gene21128:CDS | 55.0% | |
CAGACACATAGTTGCCCCCA+AGG | - | chr1.4:67894023-67894042 | None:intergenic | 55.0% | |
CTTGGGGGCAACTATGTGTC+TGG | + | chr1.4:67894021-67894040 | MS.gene21128:CDS | 55.0% | |
GAGCAACGGAGACGGAGAAT+GGG | - | chr1.4:67888772-67888791 | None:intergenic | 55.0% | |
GCAGGTGGACAGTGGTTTGA+AGG | + | chr1.4:67889822-67889841 | MS.gene21128:intron | 55.0% | |
GGAGAAGGGTTTGAGAGGGT+GGG | - | chr1.4:67888675-67888694 | None:intergenic | 55.0% | |
GGAGACGGAGAATGGGGTTA+TGG | - | chr1.4:67888765-67888784 | None:intergenic | 55.0% | |
GGATTTGAGGGGCTGTTCCT+TGG | + | chr1.4:67894003-67894022 | MS.gene21128:CDS | 55.0% | |
GGGAAAGGGGAATGGAGATG+AGG | - | chr1.4:67888700-67888719 | None:intergenic | 55.0% | |
GGTCGGAGAAGGGTTTGAGA+GGG | - | chr1.4:67888679-67888698 | None:intergenic | 55.0% | |
GGTTTGAGAGGGTGGGAAGA+AGG | - | chr1.4:67888668-67888687 | None:intergenic | 55.0% | |
GTCGACTGTGTGGTTGTTGG+TGG | + | chr1.4:67888862-67888881 | MS.gene21128:CDS | 55.0% | |
GTGGTGCTCGGTTAGGGAAA+AGG | - | chr1.4:67893259-67893278 | None:intergenic | 55.0% | |
TAACCGAGCACCACCTGGAA+GGG | + | chr1.4:67893265-67893284 | MS.gene21128:CDS | 55.0% | |
TAGGCGTCTGCCAAAGCCAA+AGG | + | chr1.4:67891582-67891601 | MS.gene21128:intron | 55.0% | |
TCCCTCAACACACCTTCCCA+AGG | - | chr1.4:67894052-67894071 | None:intergenic | 55.0% | |
TGACACCGCCTCACACATGT+TGG | + | chr1.4:67889772-67889791 | MS.gene21128:intron | 55.0% | |
TTCCAGGTGGTGCTCGGTTA+GGG | - | chr1.4:67893265-67893284 | None:intergenic | 55.0% | |
TTTGAGGGGCTGTTCCTTGG+GGG | + | chr1.4:67894006-67894025 | MS.gene21128:CDS | 55.0% | |
! | ATTGGTGGCAAGATCAGGGC+TGG | + | chr1.4:67889955-67889974 | MS.gene21128:CDS | 55.0% |
! | GAAAGTGCATCTGCAGCAGC+AGG | - | chr1.4:67892919-67892938 | None:intergenic | 55.0% |
! | GACTGTGTGGTTGTTGGTGG+TGG | + | chr1.4:67888865-67888884 | MS.gene21128:CDS | 55.0% |
! | GCCTTGGGAAGGTGTGTTGA+GGG | + | chr1.4:67894048-67894067 | MS.gene21128:CDS | 55.0% |
! | TCCGTCGACTGTGTGGTTGT+TGG | + | chr1.4:67888859-67888878 | MS.gene21128:CDS | 55.0% |
! | TGCCTTGGGAAGGTGTGTTG+AGG | + | chr1.4:67894047-67894066 | MS.gene21128:CDS | 55.0% |
!! | GAGGCGAAAGATCGAGTTGG+TGG | + | chr1.4:67888961-67888980 | MS.gene21128:CDS | 55.0% |
!! | GGTTTTAGTCGGAGATGCGG+TGG | - | chr1.4:67888809-67888828 | None:intergenic | 55.0% |
!! | GTTGTTGGTGGTGGCATCAG+TGG | + | chr1.4:67888874-67888893 | MS.gene21128:CDS | 55.0% |
!! | TGTCTGGTGTTGCCTTGGGA+AGG | + | chr1.4:67894037-67894056 | MS.gene21128:CDS | 55.0% |
!! | TTAAGAGACGGGTTGGGGGA+TGG | - | chr1.4:67890472-67890491 | None:intergenic | 55.0% |
CCGCAATGGAGCAACGGAGA+CGG | - | chr1.4:67888780-67888799 | None:intergenic | 60.0% | |
CCGTCTCCGTTGCTCCATTG+CGG | + | chr1.4:67888777-67888796 | MS.gene21128:CDS | 60.0% | |
CGGAGAAGGGTTTGAGAGGG+TGG | - | chr1.4:67888676-67888695 | None:intergenic | 60.0% | |
CTAACCGAGCACCACCTGGA+AGG | + | chr1.4:67893264-67893283 | MS.gene21128:CDS | 60.0% | |
CTTCCAGGTGGTGCTCGGTT+AGG | - | chr1.4:67893266-67893285 | None:intergenic | 60.0% | |
GAACCCTTCCAGGTGGTGCT+CGG | - | chr1.4:67893271-67893290 | None:intergenic | 60.0% | |
GGAGCAACGGAGACGGAGAA+TGG | - | chr1.4:67888773-67888792 | None:intergenic | 60.0% | |
GTCGACGGATGAGGACTCTC+CGG | - | chr1.4:67888848-67888867 | None:intergenic | 60.0% | |
GTTTGCACTCCTTGGCTCCG+TGG | - | chr1.4:67893051-67893070 | None:intergenic | 60.0% | |
TCTCCGTTGCTCCATTGCGG+AGG | + | chr1.4:67888780-67888799 | MS.gene21128:CDS | 60.0% | |
TGGAGGAGGGGAAAGGGGAA+TGG | - | chr1.4:67888708-67888727 | None:intergenic | 60.0% | |
TGGGAAATTGAGGCCGGTGC+CGG | + | chr1.4:67889894-67889913 | MS.gene21128:CDS | 60.0% | |
TTCCCTAACCGAGCACCACC+TGG | + | chr1.4:67893260-67893279 | MS.gene21128:CDS | 60.0% | |
! | GTCCTCATCCGTCGACTGTG+TGG | + | chr1.4:67888852-67888871 | MS.gene21128:CDS | 60.0% |
! | TGCGGTGGATTCCTCCGCAA+TGG | - | chr1.4:67888794-67888813 | None:intergenic | 60.0% |
!! | AGGGCTGGCTTTGGAGCACT+TGG | + | chr1.4:67889970-67889989 | MS.gene21128:CDS | 60.0% |
!! | GGCAAGATCAGGGCTGGCTT+TGG | + | chr1.4:67889961-67889980 | MS.gene21128:CDS | 60.0% |
!! | TCAGTTGGCTTTCCCGGCAC+CGG | - | chr1.4:67889910-67889929 | None:intergenic | 60.0% |
GCGTCGAAATCTTGGGGCCG+AGG | + | chr1.4:67890179-67890198 | MS.gene21128:CDS | 65.0% | |
GGGAAATTGAGGCCGGTGCC+GGG | + | chr1.4:67889895-67889914 | MS.gene21128:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 67888652 | 67894128 | 67888652 | ID=MS.gene21128 |
chr1.4 | mRNA | 67888652 | 67894128 | 67888652 | ID=MS.gene21128.t1;Parent=MS.gene21128 |
chr1.4 | exon | 67888652 | 67889071 | 67888652 | ID=MS.gene21128.t1.exon1;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67888652 | 67889071 | 67888652 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67889826 | 67890011 | 67889826 | ID=MS.gene21128.t1.exon2;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67889826 | 67890011 | 67889826 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67890150 | 67890234 | 67890150 | ID=MS.gene21128.t1.exon3;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67890150 | 67890234 | 67890150 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67891357 | 67891504 | 67891357 | ID=MS.gene21128.t1.exon4;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67891357 | 67891504 | 67891357 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67891585 | 67891665 | 67891585 | ID=MS.gene21128.t1.exon5;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67891585 | 67891665 | 67891585 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67891763 | 67891934 | 67891763 | ID=MS.gene21128.t1.exon6;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67891763 | 67891934 | 67891763 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67892916 | 67893075 | 67892916 | ID=MS.gene21128.t1.exon7;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67892916 | 67893075 | 67892916 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67893237 | 67893340 | 67893237 | ID=MS.gene21128.t1.exon8;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67893237 | 67893340 | 67893237 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
chr1.4 | exon | 67893829 | 67894128 | 67893829 | ID=MS.gene21128.t1.exon9;Parent=MS.gene21128.t1 |
chr1.4 | CDS | 67893829 | 67894128 | 67893829 | ID=cds.MS.gene21128.t1;Parent=MS.gene21128.t1 |
Gene Sequence |
Protein sequence |