Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007672.t1 | KEH30032.1 | 86.3 | 402 | 38 | 1 | 1 | 385 | 1 | 402 | 2.70E-191 | 677.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007672.t1 | Q6DBP8 | 35.1 | 308 | 160 | 9 | 73 | 367 | 10 | 290 | 1.2e-38 | 162.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007672.t1 | A0A072UK09 | 86.3 | 402 | 38 | 1 | 1 | 385 | 1 | 402 | 1.9e-191 | 677.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene007672.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31281 | MS.gene007672 | PPI |
| MS.gene007672 | MS.gene08700 | PPI |
| MS.gene028707 | MS.gene007672 | PPI |
| MS.gene08700 | MS.gene007672 | PPI |
| MS.gene08652 | MS.gene007672 | PPI |
| MS.gene058934 | MS.gene007672 | PPI |
| MS.gene007672 | MS.gene08652 | PPI |
| MS.gene68594 | MS.gene007672 | PPI |
| MS.gene028706 | MS.gene007672 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007672.t1 | MTR_4g058910 | 88.614 | 404 | 25 | 2 | 1 | 385 | 1 | 402 | 0.0 | 677 |
| MS.gene007672.t1 | MTR_2g094600 | 54.348 | 322 | 123 | 7 | 62 | 383 | 4 | 301 | 8.36e-102 | 304 |
| MS.gene007672.t1 | MTR_1g094930 | 64.894 | 94 | 28 | 1 | 293 | 381 | 143 | 236 | 8.03e-36 | 131 |
| MS.gene007672.t1 | MTR_1g094930 | 64.894 | 94 | 28 | 1 | 293 | 381 | 238 | 331 | 3.01e-35 | 132 |
| MS.gene007672.t1 | MTR_1g116010 | 78.462 | 65 | 14 | 0 | 297 | 361 | 164 | 228 | 5.51e-33 | 124 |
| MS.gene007672.t1 | MTR_1g046680 | 72.222 | 72 | 20 | 0 | 297 | 368 | 172 | 243 | 1.60e-31 | 120 |
| MS.gene007672.t1 | MTR_4g071590 | 72.059 | 68 | 19 | 0 | 296 | 363 | 210 | 277 | 1.87e-31 | 121 |
| MS.gene007672.t1 | MTR_4g471590 | 72.059 | 68 | 19 | 0 | 296 | 363 | 210 | 277 | 1.87e-31 | 121 |
| MS.gene007672.t1 | MTR_3g117380 | 69.444 | 72 | 22 | 0 | 292 | 363 | 224 | 295 | 5.60e-31 | 120 |
| MS.gene007672.t1 | MTR_6g032830 | 43.605 | 172 | 61 | 5 | 222 | 361 | 89 | 256 | 1.03e-30 | 118 |
| MS.gene007672.t1 | MTR_5g007600 | 66.279 | 86 | 28 | 1 | 278 | 363 | 241 | 325 | 1.46e-30 | 119 |
| MS.gene007672.t1 | MTR_5g007600 | 63.750 | 80 | 29 | 0 | 281 | 360 | 141 | 220 | 3.45e-27 | 110 |
| MS.gene007672.t1 | MTR_8g076340 | 68.000 | 75 | 22 | 1 | 297 | 371 | 218 | 290 | 1.97e-30 | 118 |
| MS.gene007672.t1 | MTR_7g085410 | 71.831 | 71 | 20 | 0 | 294 | 364 | 185 | 255 | 3.18e-30 | 117 |
| MS.gene007672.t1 | MTR_1g006650 | 73.134 | 67 | 18 | 0 | 297 | 363 | 234 | 300 | 3.62e-30 | 119 |
| MS.gene007672.t1 | MTR_8g013950 | 64.198 | 81 | 29 | 0 | 283 | 363 | 212 | 292 | 9.81e-30 | 117 |
| MS.gene007672.t1 | MTR_5g021340 | 68.000 | 75 | 22 | 1 | 297 | 371 | 300 | 372 | 1.13e-29 | 118 |
| MS.gene007672.t1 | MTR_3g109760 | 73.134 | 67 | 18 | 0 | 297 | 363 | 207 | 273 | 7.97e-29 | 114 |
| MS.gene007672.t1 | MTR_7g446110 | 53.165 | 79 | 37 | 0 | 280 | 358 | 170 | 248 | 3.68e-22 | 94.7 |
| MS.gene007672.t1 | MTR_7g445950 | 53.247 | 77 | 36 | 0 | 282 | 358 | 105 | 181 | 4.72e-22 | 92.8 |
| MS.gene007672.t1 | MTR_7g446070 | 51.948 | 77 | 37 | 0 | 282 | 358 | 117 | 193 | 3.10e-21 | 90.9 |
| MS.gene007672.t1 | MTR_7g445980 | 51.250 | 80 | 38 | 1 | 280 | 358 | 16 | 95 | 2.39e-19 | 82.8 |
| MS.gene007672.t1 | MTR_5g020230 | 37.662 | 77 | 42 | 2 | 257 | 329 | 80 | 154 | 3.93e-11 | 63.2 |
| MS.gene007672.t1 | MTR_7g112330 | 57.500 | 40 | 17 | 0 | 293 | 332 | 18 | 57 | 9.87e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007672.t1 | AT1G08010 | 34.810 | 316 | 150 | 10 | 73 | 367 | 10 | 290 | 8.81e-47 | 162 |
| MS.gene007672.t1 | AT1G08010 | 34.810 | 316 | 150 | 10 | 73 | 367 | 10 | 290 | 8.81e-47 | 162 |
| MS.gene007672.t1 | AT1G08010 | 34.810 | 316 | 150 | 10 | 73 | 367 | 10 | 290 | 8.81e-47 | 162 |
| MS.gene007672.t1 | AT1G08000 | 35.570 | 298 | 155 | 7 | 79 | 366 | 17 | 287 | 6.01e-43 | 152 |
| MS.gene007672.t1 | AT1G08000 | 35.570 | 298 | 155 | 7 | 79 | 366 | 17 | 287 | 6.01e-43 | 152 |
| MS.gene007672.t1 | AT2G28340 | 33.442 | 308 | 143 | 8 | 70 | 367 | 6 | 261 | 1.52e-35 | 132 |
| MS.gene007672.t1 | AT3G54810 | 77.778 | 72 | 16 | 0 | 292 | 363 | 224 | 295 | 1.03e-33 | 128 |
| MS.gene007672.t1 | AT3G54810 | 77.778 | 72 | 16 | 0 | 292 | 363 | 224 | 295 | 1.03e-33 | 128 |
| MS.gene007672.t1 | AT4G36240 | 45.714 | 140 | 57 | 4 | 222 | 361 | 108 | 228 | 5.10e-31 | 118 |
| MS.gene007672.t1 | AT3G24050 | 71.429 | 70 | 20 | 0 | 294 | 363 | 191 | 260 | 1.12e-30 | 118 |
| MS.gene007672.t1 | AT3G60530 | 69.014 | 71 | 22 | 0 | 297 | 367 | 158 | 228 | 3.32e-30 | 116 |
| MS.gene007672.t1 | AT4G32890 | 68.056 | 72 | 23 | 0 | 292 | 363 | 192 | 263 | 3.37e-30 | 118 |
| MS.gene007672.t1 | AT5G25830 | 50.000 | 122 | 46 | 2 | 242 | 363 | 179 | 285 | 7.47e-30 | 117 |
| MS.gene007672.t1 | AT5G66320 | 66.216 | 74 | 25 | 0 | 290 | 363 | 242 | 315 | 2.44e-29 | 116 |
| MS.gene007672.t1 | AT5G66320 | 66.216 | 74 | 25 | 0 | 290 | 363 | 242 | 315 | 2.44e-29 | 116 |
| MS.gene007672.t1 | AT2G45050 | 53.000 | 100 | 44 | 1 | 267 | 363 | 146 | 245 | 3.94e-29 | 114 |
| MS.gene007672.t1 | AT3G51080 | 65.789 | 76 | 24 | 1 | 297 | 372 | 221 | 294 | 7.46e-29 | 114 |
| MS.gene007672.t1 | AT4G34680 | 60.976 | 82 | 30 | 1 | 294 | 373 | 177 | 258 | 8.62e-29 | 113 |
| MS.gene007672.t1 | AT4G34680 | 60.976 | 82 | 30 | 1 | 294 | 373 | 177 | 258 | 8.62e-29 | 113 |
| MS.gene007672.t1 | AT3G45170 | 62.857 | 70 | 26 | 0 | 294 | 363 | 112 | 181 | 1.26e-27 | 108 |
| MS.gene007672.t1 | AT2G18380 | 54.545 | 44 | 19 | 1 | 286 | 329 | 82 | 124 | 6.20e-11 | 62.0 |
Find 82 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATTGAAGGAGACATTT+TGG | 0.217499 | 4.3:+42472631 | None:intergenic |
| GAGAAATTGTTCACAAGATT+TGG | 0.237962 | 4.3:+42474308 | None:intergenic |
| TATTTATCATCAAACCTTTC+AGG | 0.244075 | 4.3:-42472054 | MS.gene007672:CDS |
| CAAGCATTGCATAGGGTCTT+AGG | 0.290975 | 4.3:+42472231 | None:intergenic |
| CTAGCTGCAGGCCGATATTC+AGG | 0.293194 | 4.3:+42472177 | None:intergenic |
| GTTAATCAGGAGACTGTTAA+AGG | 0.309270 | 4.3:-42472090 | MS.gene007672:CDS |
| GATACATTTATGTTAGAGTT+AGG | 0.318485 | 4.3:-42475600 | MS.gene007672:CDS |
| CAGGCCGATATTCAGGAAAT+AGG | 0.331499 | 4.3:+42472184 | None:intergenic |
| GGTCTTGGAAATCAGGAAAA+AGG | 0.338584 | 4.3:-42472112 | MS.gene007672:CDS |
| ACAAGAAGGTCTTGGAAATC+AGG | 0.346966 | 4.3:-42472119 | MS.gene007672:CDS |
| TCTGCAGTTCACGCAGTTGA+TGG | 0.376015 | 4.3:+42475554 | None:intergenic |
| GTCGCCTATTTCCTGAATAT+CGG | 0.393892 | 4.3:-42472188 | MS.gene007672:CDS |
| GCGTAAATTTGTTCCATTGA+AGG | 0.400336 | 4.3:+42472620 | None:intergenic |
| TGGGAGATATTGTCTTTCCT+TGG | 0.402736 | 4.3:+42472369 | None:intergenic |
| CTGAAACTGGGCTGTAGGTT+CGG | 0.407286 | 4.3:+42472592 | None:intergenic |
| TACCACGAGGACGCTTTGTC+GGG | 0.437518 | 4.3:+42472511 | None:intergenic |
| AAAGAAATTAACGGCGGTGG+TGG | 0.437736 | 4.3:+42475487 | None:intergenic |
| TCCGATTGCTGCTTTAGAAA+AGG | 0.439187 | 4.3:+42472435 | None:intergenic |
| AAATTCTCACAAGAAGGTCT+TGG | 0.447787 | 4.3:-42472127 | MS.gene007672:CDS |
| TGCACTGATGCTTCAAAGGT+TGG | 0.449929 | 4.3:+42472153 | None:intergenic |
| TCAAAGGTTGGGCTAGCTGC+AGG | 0.450155 | 4.3:+42472165 | None:intergenic |
| GGCGCCTCTCAAGCTTCGAC+AGG | 0.458075 | 4.3:-42472482 | MS.gene007672:CDS |
| ATCCAAAATGTCTCCTTCAA+TGG | 0.458572 | 4.3:-42472633 | MS.gene007672:CDS |
| ATGCTTGTGGAGTTCGATAC+AGG | 0.460657 | 4.3:-42472215 | MS.gene007672:CDS |
| CATAGGGTCTTAGGACCCTT+AGG | 0.477379 | 4.3:+42472240 | None:intergenic |
| TCTCAATGCTATTAGAGAGC+TGG | 0.477442 | 4.3:+42472349 | None:intergenic |
| CGTGAACTGCAGATAGATAA+GGG | 0.483479 | 4.3:-42475544 | MS.gene007672:CDS |
| GGACGCTTTGTCGGGATCAC+TGG | 0.489854 | 4.3:+42472519 | None:intergenic |
| CACCAAGAGATGGTTCTTCA+AGG | 0.491420 | 4.3:+42474381 | None:intergenic |
| GGAAACTGATGGTGTGGAAC+AGG | 0.492036 | 4.3:-42474426 | MS.gene007672:CDS |
| CTCAATGCTATTAGAGAGCT+GGG | 0.500421 | 4.3:+42472350 | None:intergenic |
| AAGACTGCTGGACCTGCATA+TGG | 0.501903 | 4.3:-42472669 | MS.gene007672:CDS |
| TTACCACGAGGACGCTTTGT+CGG | 0.503422 | 4.3:+42472510 | None:intergenic |
| CACCTTGAAGAACCATCTCT+TGG | 0.504280 | 4.3:-42474383 | MS.gene007672:CDS |
| GCACTGATGCTTCAAAGGTT+GGG | 0.507344 | 4.3:+42472154 | None:intergenic |
| GCGTGAACTGCAGATAGATA+AGG | 0.514186 | 4.3:-42475545 | MS.gene007672:CDS |
| TTTAGAAAAGGAGGTATGAA+TGG | 0.517959 | 4.3:+42472447 | None:intergenic |
| CAATGGAGAGAGGGGCCTAA+GGG | 0.517972 | 4.3:-42472255 | MS.gene007672:CDS |
| CTGCTAATATGAAGAACAGC+TGG | 0.521475 | 4.3:-42474532 | MS.gene007672:CDS |
| AAACAGCTTGGAAAGACTGC+TGG | 0.521813 | 4.3:-42472681 | MS.gene007672:intron |
| TGTGGAGTTCGATACAGGTC+TGG | 0.526380 | 4.3:-42472210 | MS.gene007672:CDS |
| ACAATGGAGAGAGGGGCCTA+AGG | 0.527062 | 4.3:-42472256 | MS.gene007672:CDS |
| TGAAAGCAGTAGTTATTCCT+CGG | 0.529501 | 4.3:-42472565 | MS.gene007672:CDS |
| AAACCTTTCAGGAATTCTCT+AGG | 0.536952 | 4.3:-42472043 | None:intergenic |
| CTGATGGTGTGGAACAGGAT+TGG | 0.558249 | 4.3:-42474421 | MS.gene007672:CDS |
| GAACTCCACAAGCATTGCAT+AGG | 0.559486 | 4.3:+42472223 | None:intergenic |
| TGAAACGCCACAATGGAGAG+AGG | 0.562131 | 4.3:-42472265 | MS.gene007672:CDS |
| GCACTCAAATTCTCACAAGA+AGG | 0.564610 | 4.3:-42472133 | MS.gene007672:CDS |
| TGAGTGCACTGATGCTTCAA+AGG | 0.568513 | 4.3:+42472149 | None:intergenic |
| CAATCGGATAAACAGCGTGC+TGG | 0.568743 | 4.3:-42472420 | MS.gene007672:CDS |
| TGTCGAAGCTTGAGAGGCGC+CGG | 0.571004 | 4.3:+42472484 | None:intergenic |
| TAGAAAATGTACGCATTGCG+AGG | 0.571149 | 4.3:-42472292 | MS.gene007672:CDS |
| AGAGCCTGTCGAAGCTTGAG+AGG | 0.571997 | 4.3:+42472478 | None:intergenic |
| GGTGTGTCGGATGAAATTCT+TGG | 0.574371 | 4.3:-42474488 | MS.gene007672:CDS |
| TCAGTTTCCACATCTTCAAG+TGG | 0.590091 | 4.3:+42474440 | None:intergenic |
| AACTCCACAAGCATTGCATA+GGG | 0.590903 | 4.3:+42472224 | None:intergenic |
| TATCCTAGAGAATTCCTGAA+AGG | 0.593357 | 4.3:+42472040 | None:intergenic |
| AAGACCCTATGCAATGCTTG+TGG | 0.595397 | 4.3:-42472228 | MS.gene007672:CDS |
| GAATGATGATGATGAGATGA+GGG | 0.602624 | 4.3:+42475515 | None:intergenic |
| TTAGGCCCCTCTCTCCATTG+TGG | 0.615985 | 4.3:+42472258 | None:intergenic |
| GAAACGCCACAATGGAGAGA+GGG | 0.617261 | 4.3:-42472264 | MS.gene007672:CDS |
| TCGCCGCGTAGCTCAAATGC+CGG | 0.621988 | 4.3:+42474347 | None:intergenic |
| AGCGTCCTCGTGGTAAACGC+CGG | 0.626063 | 4.3:-42472503 | MS.gene007672:CDS |
| AGAAAAGAGACATGTCACAT+GGG | 0.632184 | 4.3:-42475645 | None:intergenic |
| TGATGATGATGAGATGAGGG+AGG | 0.633605 | 4.3:+42475518 | None:intergenic |
| TAGAAAAGAGACATGTCACA+TGG | 0.642596 | 4.3:-42475646 | None:intergenic |
| GAAAAGAGACATGTCACATG+GGG | 0.645423 | 4.3:-42475644 | None:intergenic |
| CTTGAAGATGTGGAAACTGA+TGG | 0.650171 | 4.3:-42474437 | MS.gene007672:CDS |
| GATTGCTGCTTTAGAAAAGG+AGG | 0.655195 | 4.3:+42472438 | None:intergenic |
| ACTGAGAAAACACCAAGAGA+TGG | 0.656666 | 4.3:+42474371 | None:intergenic |
| TGAATGATGATGATGAGATG+AGG | 0.666818 | 4.3:+42475514 | None:intergenic |
| AAAGTTGTAATTCTCAACCG+AGG | 0.667884 | 4.3:+42472548 | None:intergenic |
| ATCCCGACAAAGCGTCCTCG+TGG | 0.667975 | 4.3:-42472513 | MS.gene007672:CDS |
| AGATGTGGAAACTGATGGTG+TGG | 0.668716 | 4.3:-42474432 | MS.gene007672:CDS |
| GTTTGATGATAAATACAACA+TGG | 0.669284 | 4.3:+42472062 | None:intergenic |
| AAACGCCACAATGGAGAGAG+GGG | 0.674715 | 4.3:-42472263 | MS.gene007672:CDS |
| TTCAATGGAACAAATTTACG+CGG | 0.676345 | 4.3:-42472618 | MS.gene007672:CDS |
| AGGTAACTGAAACGCCACAA+TGG | 0.680689 | 4.3:-42472272 | MS.gene007672:CDS |
| AGGCGCCGGCGTTTACCACG+AGG | 0.716581 | 4.3:+42472498 | None:intergenic |
| AAAAGAGACATGTCACATGG+GGG | 0.731690 | 4.3:-42475643 | None:intergenic |
| GTACCGGCATTTGAGCTACG+CGG | 0.750665 | 4.3:-42474350 | MS.gene007672:CDS |
| TCAAGCTTAAAAGATCGACG+AGG | 0.809147 | 4.3:-42473891 | MS.gene007672:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATATTTTTTTAAAATAA+GGG | - | chr4.3:42474634-42474653 | MS.gene007672:intron | 0.0% |
| !! | GTTATATTTATATACTTTAA+GGG | - | chr4.3:42472986-42473005 | MS.gene007672:intron | 10.0% |
| !! | TGTTATATTTATATACTTTA+AGG | - | chr4.3:42472985-42473004 | MS.gene007672:intron | 10.0% |
| !! | AAATGAAAAAGAAAGAATAT+TGG | + | chr4.3:42472248-42472267 | None:intergenic | 15.0% |
| !! | AATTATTATATGTTTAGAGA+CGG | - | chr4.3:42474665-42474684 | MS.gene007672:intron | 15.0% |
| !! | ACTGAAAAAAAAGAAATTAA+CGG | + | chr4.3:42472203-42472222 | None:intergenic | 15.0% |
| !! | TAAAGTATATAAATAAGATG+AGG | - | chr4.3:42472832-42472851 | MS.gene007672:intron | 15.0% |
| !!! | ATATTTTTTTAAAATAAGGG+AGG | - | chr4.3:42474637-42474656 | MS.gene007672:intron | 15.0% |
| !!! | ATGTGTTATAAAACTTTTTT+GGG | - | chr4.3:42473906-42473925 | MS.gene007672:CDS | 15.0% |
| !!! | TAATGTTTTAATTAAACTCA+AGG | + | chr4.3:42474893-42474912 | None:intergenic | 15.0% |
| !!! | TATTTTTTTAAAATAAGGGA+GGG | - | chr4.3:42474638-42474657 | MS.gene007672:intron | 15.0% |
| !!! | TTTACTTTTATGATACATTT+TGG | - | chr4.3:42474058-42474077 | MS.gene007672:intron | 15.0% |
| !!! | TTTTTTGACAAGAATTTTAA+TGG | - | chr4.3:42473169-42473188 | MS.gene007672:intron | 15.0% |
| !! | AAAGTCTTAAAGACATAATA+TGG | + | chr4.3:42472355-42472374 | None:intergenic | 20.0% |
| !! | AGATTGTACATTATGAATAA+TGG | + | chr4.3:42472299-42472318 | None:intergenic | 20.0% |
| !! | ATTATTATATGTTTAGAGAC+GGG | - | chr4.3:42474666-42474685 | MS.gene007672:intron | 20.0% |
| !! | TGATAAATTAATTATGTGCA+TGG | - | chr4.3:42473468-42473487 | MS.gene007672:intron | 20.0% |
| !!! | AATTTCTTTTTTTTCAGTTC+CGG | - | chr4.3:42472205-42472224 | MS.gene007672:CDS | 20.0% |
| !!! | ATTTTTTTAAAATAAGGGAG+GGG | - | chr4.3:42474639-42474658 | MS.gene007672:intron | 20.0% |
| !!! | GATGTGTTATAAAACTTTTT+TGG | - | chr4.3:42473905-42473924 | MS.gene007672:CDS | 20.0% |
| !!! | TACTTTAAGAAGTAAATTGA+TGG | - | chr4.3:42473029-42473048 | MS.gene007672:intron | 20.0% |
| !!! | TGTGTTATAAAACTTTTTTG+GGG | - | chr4.3:42473907-42473926 | MS.gene007672:CDS | 20.0% |
| !!! | TTCTTTTTGAAATGTTTTCT+AGG | - | chr4.3:42473870-42473889 | MS.gene007672:intron | 20.0% |
| ! | AAATAAGCGAAACAAAATTG+AGG | + | chr4.3:42472274-42472293 | None:intergenic | 25.0% |
| ! | ATACTTACAACTTCAAAACA+TGG | + | chr4.3:42474331-42474350 | None:intergenic | 25.0% |
| ! | CTCTGATAATAAAAAATGTG+TGG | + | chr4.3:42473541-42473560 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGAAATTAACGG+CGG | + | chr4.3:42472200-42472219 | None:intergenic | 25.0% |
| ! | GATACATTTATGTTAGAGTT+AGG | - | chr4.3:42472078-42472097 | MS.gene007672:CDS | 25.0% |
| ! | GCTCAAAATATGTTCAAAAA+AGG | - | chr4.3:42474138-42474157 | MS.gene007672:intron | 25.0% |
| ! | TATTTATCATCAAACCTTTC+AGG | - | chr4.3:42475624-42475643 | MS.gene007672:CDS | 25.0% |
| !! | AAAGTATGGAAGAATTTTAG+TGG | - | chr4.3:42474864-42474883 | MS.gene007672:intron | 25.0% |
| !! | GTTTGATGATAAATACAACA+TGG | + | chr4.3:42475619-42475638 | None:intergenic | 25.0% |
| !! | TCTTCTTAGACGTTTTTAAT+TGG | - | chr4.3:42473637-42473656 | MS.gene007672:intron | 25.0% |
| !! | TTCGTGTATGATTAATTTTC+AGG | - | chr4.3:42474185-42474204 | MS.gene007672:intron | 25.0% |
| !! | TTTTCTTATACTTCAGTAAC+TGG | - | chr4.3:42472925-42472944 | MS.gene007672:intron | 25.0% |
| !!! | GTTTAAGTATCTTTTTGACT+CGG | - | chr4.3:42473847-42473866 | MS.gene007672:intron | 25.0% |
| !!! | GTTTTTCAAATAAAACAGCT+TGG | - | chr4.3:42474985-42475004 | MS.gene007672:intron | 25.0% |
| !!! | TTGTTTGCTAGTTGATTTTT+GGG | + | chr4.3:42472634-42472653 | None:intergenic | 25.0% |
| !!! | TTTGTTTGCTAGTTGATTTT+TGG | + | chr4.3:42472635-42472654 | None:intergenic | 25.0% |
| !!! | TTTTAGTTGTGATGAATAGA+TGG | - | chr4.3:42474350-42474369 | MS.gene007672:CDS | 25.0% |
| AAAGGCTAATTCGTTTGATA+GGG | - | chr4.3:42473588-42473607 | MS.gene007672:intron | 30.0% | |
| AAATCTGTCTCAAATTCTCT+TGG | - | chr4.3:42474241-42474260 | MS.gene007672:intron | 30.0% | |
| AACAATCAGATGCTAATTTC+TGG | + | chr4.3:42474952-42474971 | None:intergenic | 30.0% | |
| AATCAGGAAAAAGGTTAATC+AGG | - | chr4.3:42475575-42475594 | MS.gene007672:CDS | 30.0% | |
| ACGGATTTCATATACTTTAG+GGG | - | chr4.3:42472957-42472976 | MS.gene007672:intron | 30.0% | |
| AGTATCCTGCAAAAAGATTA+GGG | + | chr4.3:42473128-42473147 | None:intergenic | 30.0% | |
| CTGAACACAAATCATGATAA+TGG | - | chr4.3:42474083-42474102 | MS.gene007672:intron | 30.0% | |
| GAGAAATTGTTCACAAGATT+TGG | + | chr4.3:42473373-42473392 | None:intergenic | 30.0% | |
| GATTCTCAATTACTAATGGA+TGG | - | chr4.3:42473097-42473116 | MS.gene007672:intron | 30.0% | |
| GCAACATACTTTATATACTC+CGG | + | chr4.3:42472863-42472882 | None:intergenic | 30.0% | |
| GTTGGATTCTCAATTACTAA+TGG | - | chr4.3:42473093-42473112 | MS.gene007672:intron | 30.0% | |
| TACTTCAGAGACTAAATTGA+CGG | + | chr4.3:42472788-42472807 | None:intergenic | 30.0% | |
| TGCTTTCAAAAACTGAAACT+GGG | + | chr4.3:42475101-42475120 | None:intergenic | 30.0% | |
| TTCAATGGAACAAATTTACG+CGG | - | chr4.3:42475060-42475079 | MS.gene007672:intron | 30.0% | |
| TTGCAACATAAAGTCTATGT+AGG | - | chr4.3:42474525-42474544 | MS.gene007672:CDS | 30.0% | |
| ! | ATAGGGTTTATCCTTTTCAA+CGG | - | chr4.3:42473605-42473624 | MS.gene007672:intron | 30.0% |
| ! | GACGGATTTCATATACTTTA+GGG | - | chr4.3:42472956-42472975 | MS.gene007672:intron | 30.0% |
| ! | TAATTTTACTCGCATGCTTT+TGG | - | chr4.3:42474581-42474600 | MS.gene007672:intron | 30.0% |
| ! | TTTAGAAAAGGAGGTATGAA+TGG | + | chr4.3:42475234-42475253 | None:intergenic | 30.0% |
| !! | CAAGAATTTTAATGGTGTGT+CGG | - | chr4.3:42473177-42473196 | MS.gene007672:intron | 30.0% |
| !! | TGACGGATTTCATATACTTT+AGG | - | chr4.3:42472955-42472974 | MS.gene007672:intron | 30.0% |
| AAAAAAGAAATTAACGGCGG+TGG | + | chr4.3:42472197-42472216 | None:intergenic | 35.0% | |
| AAAGTTGTAATTCTCAACCG+AGG | + | chr4.3:42475133-42475152 | None:intergenic | 35.0% | |
| AAATTCTCACAAGAAGGTCT+TGG | - | chr4.3:42475551-42475570 | MS.gene007672:CDS | 35.0% | |
| AACTCAATCAACCTAGTCAT+TGG | + | chr4.3:42474507-42474526 | None:intergenic | 35.0% | |
| AATGTAAGAGACTAACGTGA+CGG | - | chr4.3:42472901-42472920 | MS.gene007672:intron | 35.0% | |
| AATTATCAGATGCCATCCTA+CGG | + | chr4.3:42474778-42474797 | None:intergenic | 35.0% | |
| AGTGTGAAGTAGCATATGTT+GGG | - | chr4.3:42473070-42473089 | MS.gene007672:intron | 35.0% | |
| ATAGTACTCATACCTTAACG+TGG | - | chr4.3:42474267-42474286 | MS.gene007672:intron | 35.0% | |
| ATCATCTATCGATCTTATCC+TGG | + | chr4.3:42474449-42474468 | None:intergenic | 35.0% | |
| ATCCAAAATGTCTCCTTCAA+TGG | - | chr4.3:42475045-42475064 | MS.gene007672:intron | 35.0% | |
| ATGGGGGAATAAGAAAAAAG+TGG | - | chr4.3:42472051-42472070 | MS.gene007672:CDS | 35.0% | |
| CAAAGGCTAATTCGTTTGAT+AGG | - | chr4.3:42473587-42473606 | MS.gene007672:intron | 35.0% | |
| CACAGAGAAAATCACTTGAA+AGG | + | chr4.3:42474823-42474842 | None:intergenic | 35.0% | |
| CAGTATCCTGCAAAAAGATT+AGG | + | chr4.3:42473129-42473148 | None:intergenic | 35.0% | |
| CTGCTTTCAAAAACTGAAAC+TGG | + | chr4.3:42475102-42475121 | None:intergenic | 35.0% | |
| GCGTGTATACATGTAAAGTA+TGG | - | chr4.3:42474850-42474869 | MS.gene007672:intron | 35.0% | |
| GGTAATGAATGACATTCCTT+TGG | - | chr4.3:42474416-42474435 | MS.gene007672:CDS | 35.0% | |
| GTAATTGCTTAATGTTCCCA+TGG | - | chr4.3:42472747-42472766 | MS.gene007672:intron | 35.0% | |
| GTATCCTGCAAAAAGATTAG+GGG | + | chr4.3:42473127-42473146 | None:intergenic | 35.0% | |
| GTTAATCAGGAGACTGTTAA+AGG | - | chr4.3:42475588-42475607 | MS.gene007672:CDS | 35.0% | |
| GTTTATTCTTCCTCTACCAT+GGG | + | chr4.3:42472766-42472785 | None:intergenic | 35.0% | |
| TAAATAAGATGAGGAGTCTC+CGG | - | chr4.3:42472841-42472860 | MS.gene007672:intron | 35.0% | |
| TATCACTGGATTACAAAGCT+AGG | - | chr4.3:42474735-42474754 | MS.gene007672:intron | 35.0% | |
| TATCCTGCAAAAAGATTAGG+GGG | + | chr4.3:42473126-42473145 | None:intergenic | 35.0% | |
| TGAAAGCAGTAGTTATTCCT+CGG | - | chr4.3:42475113-42475132 | MS.gene007672:intron | 35.0% | |
| TGGGGGAATAAGAAAAAAGT+GGG | - | chr4.3:42472052-42472071 | MS.gene007672:CDS | 35.0% | |
| TTACTACAATGATGTTGTGC+AGG | - | chr4.3:42473729-42473748 | MS.gene007672:intron | 35.0% | |
| ! | ATTGAAGGAGACATTTTGGA+TGG | + | chr4.3:42475046-42475065 | None:intergenic | 35.0% |
| ! | GAATGATGATGATGAGATGA+GGG | + | chr4.3:42472166-42472185 | None:intergenic | 35.0% |
| ! | GACTGGTTATCTTATCAGAA+TGG | - | chr4.3:42472659-42472678 | MS.gene007672:CDS | 35.0% |
| ! | GCGTAAATTTGTTCCATTGA+AGG | + | chr4.3:42475061-42475080 | None:intergenic | 35.0% |
| ! | TAAGACTTTGTTTGCCACTT+GGG | - | chr4.3:42472366-42472385 | MS.gene007672:CDS | 35.0% |
| ! | TAGGGTTTATCCTTTTCAAC+GGG | - | chr4.3:42473606-42473625 | MS.gene007672:intron | 35.0% |
| ! | TATGCTTGCTTTGATGACTA+TGG | - | chr4.3:42473669-42473688 | MS.gene007672:intron | 35.0% |
| ! | TGAATGATGATGATGAGATG+AGG | + | chr4.3:42472167-42472186 | None:intergenic | 35.0% |
| ! | TGATGACTATGGCATTTTGT+TGG | - | chr4.3:42473680-42473699 | MS.gene007672:intron | 35.0% |
| ! | TGATTTTCCACTTGAAGATG+TGG | - | chr4.3:42473231-42473250 | MS.gene007672:intron | 35.0% |
| ! | TTAAGACTTTGTTTGCCACT+TGG | - | chr4.3:42472365-42472384 | MS.gene007672:CDS | 35.0% |
| ! | TTCCATTGAAGGAGACATTT+TGG | + | chr4.3:42475050-42475069 | None:intergenic | 35.0% |
| ! | TTGAAGGAGACATTTTGGAT+GGG | + | chr4.3:42475045-42475064 | None:intergenic | 35.0% |
| !! | CTTTCAAGTGATTTTCTCTG+TGG | - | chr4.3:42474821-42474840 | MS.gene007672:intron | 35.0% |
| !! | TTGTTGGTCAGGATTTTTAG+CGG | - | chr4.3:42473696-42473715 | MS.gene007672:intron | 35.0% |
| !!! | TCCTTTTCTAAAGCAGCAAT+CGG | - | chr4.3:42475242-42475261 | MS.gene007672:intron | 35.0% |
| AAAAACTGAAACTGGGCTGT+AGG | + | chr4.3:42475094-42475113 | None:intergenic | 40.0% | |
| ACAAGAAGGTCTTGGAAATC+AGG | - | chr4.3:42475559-42475578 | MS.gene007672:CDS | 40.0% | |
| ACTAGCAAACAAAGCTTGAC+TGG | - | chr4.3:42472642-42472661 | MS.gene007672:CDS | 40.0% | |
| ACTGAGAAAACACCAAGAGA+TGG | + | chr4.3:42473310-42473329 | None:intergenic | 40.0% | |
| AGAGTCCTGTTGTGTATGTT+TGG | - | chr4.3:42473557-42473576 | MS.gene007672:intron | 40.0% | |
| AGCAACCAAACATACACAAC+AGG | + | chr4.3:42473565-42473584 | None:intergenic | 40.0% | |
| ATTATCAGATGCCATCCTAC+GGG | + | chr4.3:42474777-42474796 | None:intergenic | 40.0% | |
| ATTCTCCCCTTTCACTTACT+AGG | + | chr4.3:42473813-42473832 | None:intergenic | 40.0% | |
| CATGCAGTAGGTAGTATTGT+TGG | - | chr4.3:42472686-42472705 | MS.gene007672:intron | 40.0% | |
| CATTATGCAGAGCCCAAAAA+AGG | - | chr4.3:42475286-42475305 | MS.gene007672:intron | 40.0% | |
| CGTGAACTGCAGATAGATAA+GGG | - | chr4.3:42472134-42472153 | MS.gene007672:CDS | 40.0% | |
| CTCAATGCTATTAGAGAGCT+GGG | + | chr4.3:42475331-42475350 | None:intergenic | 40.0% | |
| CTCAGAAAGTGAGAAAGTTC+TGG | - | chr4.3:42474302-42474321 | MS.gene007672:CDS | 40.0% | |
| CTGCTAATATGAAGAACAGC+TGG | - | chr4.3:42473146-42473165 | MS.gene007672:intron | 40.0% | |
| CTTGAAGATGGTTTATGGCT+AGG | - | chr4.3:42474387-42474406 | MS.gene007672:CDS | 40.0% | |
| CTTGAAGATGTGGAAACTGA+TGG | - | chr4.3:42473241-42473260 | MS.gene007672:intron | 40.0% | |
| GAAAGTTACACCCGTTGAAA+AGG | + | chr4.3:42473619-42473638 | None:intergenic | 40.0% | |
| GACCATCATACAGTCTTCAA+CGG | - | chr4.3:42474699-42474718 | MS.gene007672:intron | 40.0% | |
| GAGTGTGAAGTAGCATATGT+TGG | - | chr4.3:42473069-42473088 | MS.gene007672:intron | 40.0% | |
| GCACTCAAATTCTCACAAGA+AGG | - | chr4.3:42475545-42475564 | MS.gene007672:CDS | 40.0% | |
| GGTCTTGGAAATCAGGAAAA+AGG | - | chr4.3:42475566-42475585 | MS.gene007672:CDS | 40.0% | |
| GGTGTTCAACCTAACAGTAA+CGG | + | chr4.3:42472422-42472441 | None:intergenic | 40.0% | |
| GGTTTATTCTTCCTCTACCA+TGG | + | chr4.3:42472767-42472786 | None:intergenic | 40.0% | |
| GTATGTTTGGTTGCTTGCAA+AGG | - | chr4.3:42473570-42473589 | MS.gene007672:intron | 40.0% | |
| GTCGCCTATTTCCTGAATAT+CGG | - | chr4.3:42475490-42475509 | MS.gene007672:CDS | 40.0% | |
| GTGATTGAACTCTGTATCAC+TGG | - | chr4.3:42474721-42474740 | MS.gene007672:intron | 40.0% | |
| GTGTGAAGTAGCATATGTTG+GGG | - | chr4.3:42473071-42473090 | MS.gene007672:intron | 40.0% | |
| GTGTGCTTGAAGATGGTTTA+TGG | - | chr4.3:42474382-42474401 | MS.gene007672:CDS | 40.0% | |
| TACTCATACCTTAACGTGGA+GGG | - | chr4.3:42474271-42474290 | MS.gene007672:intron | 40.0% | |
| TAGAAAATGTACGCATTGCG+AGG | - | chr4.3:42475386-42475405 | MS.gene007672:intron | 40.0% | |
| TATATGTTTAGAGACGGGAG+AGG | - | chr4.3:42474671-42474690 | MS.gene007672:intron | 40.0% | |
| TCAAGCTTAAAAGATCGACG+AGG | - | chr4.3:42473787-42473806 | MS.gene007672:intron | 40.0% | |
| TCAATCAACCTAGTCATTGG+CGG | + | chr4.3:42474504-42474523 | None:intergenic | 40.0% | |
| TCAGTTTCCACATCTTCAAG+TGG | + | chr4.3:42473241-42473260 | None:intergenic | 40.0% | |
| TCTCAATGCTATTAGAGAGC+TGG | + | chr4.3:42475332-42475351 | None:intergenic | 40.0% | |
| TGGGAGATATTGTCTTTCCT+TGG | + | chr4.3:42475312-42475331 | None:intergenic | 40.0% | |
| TGGTTTATGGCTAGGTAACA+TGG | - | chr4.3:42474395-42474414 | MS.gene007672:CDS | 40.0% | |
| TTCATGTGTGTGCTTGAAGA+TGG | - | chr4.3:42474375-42474394 | MS.gene007672:CDS | 40.0% | |
| ! | AACTCCACAAGCATTGCATA+GGG | + | chr4.3:42475457-42475476 | None:intergenic | 40.0% |
| ! | ACTATGGCATTTTGTTGGTC+AGG | - | chr4.3:42473685-42473704 | MS.gene007672:intron | 40.0% |
| ! | TTTCCCCCTAATCTTTTTGC+AGG | - | chr4.3:42473120-42473139 | MS.gene007672:intron | 40.0% |
| !! | GATTGCTGCTTTAGAAAAGG+AGG | + | chr4.3:42475243-42475262 | None:intergenic | 40.0% |
| !! | GGAATAGTTTTGCCATATGC+AGG | + | chr4.3:42475024-42475043 | None:intergenic | 40.0% |
| !! | TCCGATTGCTGCTTTAGAAA+AGG | + | chr4.3:42475246-42475265 | None:intergenic | 40.0% |
| !! | TTTGTTTGCCACTTGGGTTT+TGG | - | chr4.3:42472372-42472391 | MS.gene007672:CDS | 40.0% |
| !!! | GTCTTTCCTTGGCCTTTTTT+GGG | + | chr4.3:42475301-42475320 | None:intergenic | 40.0% |
| !!! | TCTTGGTGTTTTCTCAGTAC+CGG | - | chr4.3:42473312-42473331 | MS.gene007672:intron | 40.0% |
| !!! | TGTCTTTCCTTGGCCTTTTT+TGG | + | chr4.3:42475302-42475321 | None:intergenic | 40.0% |
| !!! | TGTTGGTCAGGATTTTTAGC+GGG | - | chr4.3:42473697-42473716 | MS.gene007672:intron | 40.0% |
| AAACAGCTTGGAAAGACTGC+TGG | - | chr4.3:42474997-42475016 | MS.gene007672:intron | 45.0% | |
| AAAGAAATTAACGGCGGTGG+TGG | + | chr4.3:42472194-42472213 | None:intergenic | 45.0% | |
| AAGACCCTATGCAATGCTTG+TGG | - | chr4.3:42475450-42475469 | MS.gene007672:intron | 45.0% | |
| ACGAGGCCTAGTAAGTGAAA+GGG | - | chr4.3:42473804-42473823 | MS.gene007672:intron | 45.0% | |
| ACTCATACCTTAACGTGGAG+GGG | - | chr4.3:42474272-42474291 | MS.gene007672:intron | 45.0% | |
| AGGTAACTGAAACGCCACAA+TGG | - | chr4.3:42475406-42475425 | MS.gene007672:intron | 45.0% | |
| ATGCTTGTGGAGTTCGATAC+AGG | - | chr4.3:42475463-42475482 | MS.gene007672:intron | 45.0% | |
| CACCAAGAGATGGTTCTTCA+AGG | + | chr4.3:42473300-42473319 | None:intergenic | 45.0% | |
| CACCGTTGAAGACTGTATGA+TGG | + | chr4.3:42474704-42474723 | None:intergenic | 45.0% | |
| CACCTTGAAGAACCATCTCT+TGG | - | chr4.3:42473295-42473314 | MS.gene007672:intron | 45.0% | |
| CAGGCCGATATTCAGGAAAT+AGG | + | chr4.3:42475497-42475516 | None:intergenic | 45.0% | |
| GAAGTAGCATATGTTGGGGT+TGG | - | chr4.3:42473075-42473094 | MS.gene007672:intron | 45.0% | |
| GCGTGAACTGCAGATAGATA+AGG | - | chr4.3:42472133-42472152 | MS.gene007672:CDS | 45.0% | |
| GCTTAATGTTCCCATGGTAG+AGG | - | chr4.3:42472753-42472772 | MS.gene007672:intron | 45.0% | |
| GGACATTTGAAGAGACTCAC+CGG | + | chr4.3:42472227-42472246 | None:intergenic | 45.0% | |
| GGTGTGTCGGATGAAATTCT+TGG | - | chr4.3:42473190-42473209 | MS.gene007672:intron | 45.0% | |
| GTACTCATACCTTAACGTGG+AGG | - | chr4.3:42474270-42474289 | MS.gene007672:intron | 45.0% | |
| GTTCAACCTAACAGTAACGG+AGG | + | chr4.3:42472419-42472438 | None:intergenic | 45.0% | |
| TATACGCCTCCGTTACTGTT+AGG | - | chr4.3:42472410-42472429 | MS.gene007672:CDS | 45.0% | |
| TCCATCCAAACAGCAAAGAC+AGG | + | chr4.3:42473417-42473436 | None:intergenic | 45.0% | |
| TTATCCTGGTTGTCAGCCAA+AGG | + | chr4.3:42474435-42474454 | None:intergenic | 45.0% | |
| ! | AGATGTGGAAACTGATGGTG+TGG | - | chr4.3:42473246-42473265 | MS.gene007672:intron | 45.0% |
| ! | CAAGCATTGCATAGGGTCTT+AGG | + | chr4.3:42475450-42475469 | None:intergenic | 45.0% |
| ! | GAACTCCACAAGCATTGCAT+AGG | + | chr4.3:42475458-42475477 | None:intergenic | 45.0% |
| ! | GCACTGATGCTTCAAAGGTT+GGG | + | chr4.3:42475527-42475546 | None:intergenic | 45.0% |
| ! | GTGATTTTCTCTGTGGACTC+TGG | - | chr4.3:42474828-42474847 | MS.gene007672:intron | 45.0% |
| ! | TGAGTGCACTGATGCTTCAA+AGG | + | chr4.3:42475532-42475551 | None:intergenic | 45.0% |
| ! | TGATGATGATGAGATGAGGG+AGG | + | chr4.3:42472163-42472182 | None:intergenic | 45.0% |
| ! | TGCACTGATGCTTCAAAGGT+TGG | + | chr4.3:42475528-42475547 | None:intergenic | 45.0% |
| !! | TCCTGTCTTTGCTGTTTGGA+TGG | - | chr4.3:42473413-42473432 | MS.gene007672:intron | 45.0% |
| !!! | TTTGCCACTTGGGTTTTGGA+GGG | - | chr4.3:42472376-42472395 | MS.gene007672:CDS | 45.0% |
| !!! | GATAATATTTTTTTAAAATA+AGG | - | chr4.3:42474633-42474652 | MS.gene007672:intron | 5.0% |
| AAAACTCGCACACAACTGCG+AGG | + | chr4.3:42472467-42472486 | None:intergenic | 50.0% | |
| AAACGCCACAATGGAGAGAG+GGG | - | chr4.3:42475415-42475434 | MS.gene007672:intron | 50.0% | |
| AAGACTGCTGGACCTGCATA+TGG | - | chr4.3:42475009-42475028 | MS.gene007672:intron | 50.0% | |
| CAATCGGATAAACAGCGTGC+TGG | - | chr4.3:42475258-42475277 | MS.gene007672:intron | 50.0% | |
| CAGAATGGTGCACATGCAGT+AGG | - | chr4.3:42472674-42472693 | MS.gene007672:CDS | 50.0% | |
| CATAGGGTCTTAGGACCCTT+AGG | + | chr4.3:42475441-42475460 | None:intergenic | 50.0% | |
| CATTCCTTTGGCTGACAACC+AGG | - | chr4.3:42474428-42474447 | MS.gene007672:CDS | 50.0% | |
| CGAGGCCTAGTAAGTGAAAG+GGG | - | chr4.3:42473805-42473824 | MS.gene007672:intron | 50.0% | |
| CGAGGTCTTAGGTTCAAAGC+GGG | + | chr4.3:42472449-42472468 | None:intergenic | 50.0% | |
| CTGAAACTGGGCTGTAGGTT+CGG | + | chr4.3:42475089-42475108 | None:intergenic | 50.0% | |
| CTTAGGTTCAAAGCGGGTGA+AGG | + | chr4.3:42472443-42472462 | None:intergenic | 50.0% | |
| GAAACGCCACAATGGAGAGA+GGG | - | chr4.3:42475414-42475433 | MS.gene007672:intron | 50.0% | |
| GACGAGGCCTAGTAAGTGAA+AGG | - | chr4.3:42473803-42473822 | MS.gene007672:intron | 50.0% | |
| GCGAGGTCTTAGGTTCAAAG+CGG | + | chr4.3:42472450-42472469 | None:intergenic | 50.0% | |
| TCTGCAGTTCACGCAGTTGA+TGG | + | chr4.3:42472127-42472146 | None:intergenic | 50.0% | |
| TGAAACGCCACAATGGAGAG+AGG | - | chr4.3:42475413-42475432 | MS.gene007672:intron | 50.0% | |
| TGTGGAGTTCGATACAGGTC+TGG | - | chr4.3:42475468-42475487 | MS.gene007672:intron | 50.0% | |
| TTACCACGAGGACGCTTTGT+CGG | + | chr4.3:42475171-42475190 | None:intergenic | 50.0% | |
| ! | CAGTAACTGGTGACGAGTGA+CGG | - | chr4.3:42472938-42472957 | MS.gene007672:intron | 50.0% |
| ! | CTGATGGTGTGGAACAGGAT+TGG | - | chr4.3:42473257-42473276 | MS.gene007672:intron | 50.0% |
| ! | GGAAACTGATGGTGTGGAAC+AGG | - | chr4.3:42473252-42473271 | MS.gene007672:intron | 50.0% |
| !! | CTGCTCCTGTCTTTGCTGTT+TGG | - | chr4.3:42473409-42473428 | MS.gene007672:intron | 50.0% |
| !! | GTTTGCCACTTGGGTTTTGG+AGG | - | chr4.3:42472375-42472394 | MS.gene007672:CDS | 50.0% |
| !!! | TTGCCACTTGGGTTTTGGAG+GGG | - | chr4.3:42472377-42472396 | MS.gene007672:CDS | 50.0% |
| ACAATGGAGAGAGGGGCCTA+AGG | - | chr4.3:42475422-42475441 | MS.gene007672:intron | 55.0% | |
| AGAGCCTGTCGAAGCTTGAG+AGG | + | chr4.3:42475203-42475222 | None:intergenic | 55.0% | |
| CAATGGAGAGAGGGGCCTAA+GGG | - | chr4.3:42475423-42475442 | MS.gene007672:intron | 55.0% | |
| CGCAATACCCCTCCACGTTA+AGG | + | chr4.3:42474282-42474301 | None:intergenic | 55.0% | |
| CTAGCTGCAGGCCGATATTC+AGG | + | chr4.3:42475504-42475523 | None:intergenic | 55.0% | |
| CTGTCATGCCGCCAATGACT+AGG | - | chr4.3:42474493-42474512 | MS.gene007672:CDS | 55.0% | |
| GCACACAACTGCGAGGTCTT+AGG | + | chr4.3:42472460-42472479 | None:intergenic | 55.0% | |
| GCAGAGCCCAAAAAAGGCCA+AGG | - | chr4.3:42475292-42475311 | MS.gene007672:intron | 55.0% | |
| TACCACGAGGACGCTTTGTC+GGG | + | chr4.3:42475170-42475189 | None:intergenic | 55.0% | |
| TCTCCCCTCCAAAACCCAAG+TGG | + | chr4.3:42472383-42472402 | None:intergenic | 55.0% | |
| TTAGGCCCCTCTCTCCATTG+TGG | + | chr4.3:42475423-42475442 | None:intergenic | 55.0% | |
| ! | GTACCGGCATTTGAGCTACG+CGG | - | chr4.3:42473328-42473347 | MS.gene007672:intron | 55.0% |
| !! | TCAAAGGTTGGGCTAGCTGC+AGG | + | chr4.3:42475516-42475535 | None:intergenic | 55.0% |
| !!! | ACTTGGGTTTTGGAGGGGAG+AGG | - | chr4.3:42472382-42472401 | MS.gene007672:CDS | 55.0% |
| AGCGTCCTCGTGGTAAACGC+CGG | - | chr4.3:42475175-42475194 | MS.gene007672:intron | 60.0% | |
| ATTCGCCAAAGCGCACCCGT+AGG | - | chr4.3:42474759-42474778 | MS.gene007672:intron | 60.0% | |
| GGACGCTTTGTCGGGATCAC+TGG | + | chr4.3:42475162-42475181 | None:intergenic | 60.0% | |
| TCGCCGCGTAGCTCAAATGC+CGG | + | chr4.3:42473334-42473353 | None:intergenic | 60.0% | |
| ! | ATCCCGACAAAGCGTCCTCG+TGG | - | chr4.3:42475165-42475184 | MS.gene007672:intron | 60.0% |
| ! | TGTCGAAGCTTGAGAGGCGC+CGG | + | chr4.3:42475197-42475216 | None:intergenic | 60.0% |
| GCCAAAGCGCACCCGTAGGA+TGG | - | chr4.3:42474763-42474782 | MS.gene007672:intron | 65.0% | |
| GCCATCCTACGGGTGCGCTT+TGG | + | chr4.3:42474767-42474786 | None:intergenic | 65.0% | |
| GGCGCCTCTCAAGCTTCGAC+AGG | - | chr4.3:42475196-42475215 | MS.gene007672:intron | 65.0% | |
| !! | AGGCGCCGGCGTTTACCACG+AGG | + | chr4.3:42475183-42475202 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 42472044 | 42475656 | 42472044 | ID=MS.gene007672 |
| chr4.3 | mRNA | 42472044 | 42475656 | 42472044 | ID=MS.gene007672.t1;Parent=MS.gene007672 |
| chr4.3 | exon | 42475474 | 42475656 | 42475474 | ID=MS.gene007672.t1.exon1;Parent=MS.gene007672.t1 |
| chr4.3 | CDS | 42475474 | 42475656 | 42475474 | ID=cds.MS.gene007672.t1;Parent=MS.gene007672.t1 |
| chr4.3 | exon | 42474301 | 42474558 | 42474301 | ID=MS.gene007672.t1.exon2;Parent=MS.gene007672.t1 |
| chr4.3 | CDS | 42474301 | 42474558 | 42474301 | ID=cds.MS.gene007672.t1;Parent=MS.gene007672.t1 |
| chr4.3 | exon | 42473887 | 42473949 | 42473887 | ID=MS.gene007672.t1.exon3;Parent=MS.gene007672.t1 |
| chr4.3 | CDS | 42473887 | 42473949 | 42473887 | ID=cds.MS.gene007672.t1;Parent=MS.gene007672.t1 |
| chr4.3 | exon | 42472044 | 42472697 | 42472044 | ID=MS.gene007672.t1.exon4;Parent=MS.gene007672.t1 |
| chr4.3 | CDS | 42472044 | 42472697 | 42472044 | ID=cds.MS.gene007672.t1;Parent=MS.gene007672.t1 |
| Gene Sequence |
| Protein sequence |
