Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31281.t1 | XP_003597258.1 | 95.1 | 306 | 14 | 1 | 1 | 306 | 8 | 312 | 1.40E-163 | 585.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31281.t1 | Q6DBP8 | 40.8 | 287 | 138 | 11 | 8 | 274 | 10 | 284 | 1.7e-43 | 177.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31281.t1 | G7IRU3 | 95.1 | 306 | 14 | 1 | 1 | 306 | 8 | 312 | 1.0e-163 | 585.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene31281.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058934 | MS.gene31281 | 0.886552 | 3.10E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31281 | MS.gene007672 | PPI |
| MS.gene31281 | MS.gene68594 | PPI |
| MS.gene028707 | MS.gene31281 | PPI |
| MS.gene31281 | MS.gene08652 | PPI |
| MS.gene31281 | MS.gene028706 | PPI |
| MS.gene31281 | MS.gene058934 | PPI |
| MS.gene31281 | MS.gene08700 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31281.t1 | MTR_2g094600 | 95.098 | 306 | 14 | 1 | 1 | 306 | 8 | 312 | 0.0 | 592 |
| MS.gene31281.t1 | MTR_4g058910 | 53.459 | 318 | 125 | 7 | 1 | 295 | 83 | 400 | 4.85e-92 | 279 |
| MS.gene31281.t1 | MTR_1g094930 | 47.312 | 186 | 70 | 6 | 117 | 274 | 26 | 211 | 6.85e-43 | 147 |
| MS.gene31281.t1 | MTR_1g094930 | 47.312 | 186 | 70 | 6 | 117 | 274 | 121 | 306 | 4.46e-42 | 148 |
| MS.gene31281.t1 | MTR_1g046680 | 50.000 | 142 | 47 | 3 | 133 | 274 | 119 | 236 | 5.49e-35 | 127 |
| MS.gene31281.t1 | MTR_1g116010 | 71.622 | 74 | 21 | 0 | 208 | 281 | 162 | 235 | 6.14e-34 | 124 |
| MS.gene31281.t1 | MTR_7g085410 | 66.667 | 84 | 28 | 0 | 195 | 278 | 173 | 256 | 1.15e-33 | 124 |
| MS.gene31281.t1 | MTR_6g032830 | 77.143 | 70 | 16 | 0 | 210 | 279 | 192 | 261 | 4.51e-33 | 122 |
| MS.gene31281.t1 | MTR_5g007600 | 70.130 | 77 | 23 | 0 | 198 | 274 | 247 | 323 | 5.83e-33 | 124 |
| MS.gene31281.t1 | MTR_5g007600 | 65.789 | 76 | 26 | 0 | 198 | 273 | 145 | 220 | 1.09e-29 | 115 |
| MS.gene31281.t1 | MTR_8g076340 | 48.936 | 141 | 62 | 4 | 135 | 274 | 151 | 282 | 1.53e-31 | 119 |
| MS.gene31281.t1 | MTR_1g006650 | 76.923 | 65 | 15 | 0 | 210 | 274 | 234 | 298 | 1.66e-31 | 120 |
| MS.gene31281.t1 | MTR_4g071590 | 75.385 | 65 | 16 | 0 | 210 | 274 | 211 | 275 | 3.45e-31 | 118 |
| MS.gene31281.t1 | MTR_4g471590 | 75.385 | 65 | 16 | 0 | 210 | 274 | 211 | 275 | 3.45e-31 | 118 |
| MS.gene31281.t1 | MTR_3g117380 | 67.123 | 73 | 24 | 0 | 202 | 274 | 221 | 293 | 5.22e-31 | 118 |
| MS.gene31281.t1 | MTR_8g013950 | 75.385 | 65 | 16 | 0 | 210 | 274 | 226 | 290 | 1.72e-29 | 115 |
| MS.gene31281.t1 | MTR_3g109760 | 75.385 | 65 | 16 | 0 | 210 | 274 | 207 | 271 | 2.78e-29 | 114 |
| MS.gene31281.t1 | MTR_5g021340 | 73.846 | 65 | 17 | 0 | 210 | 274 | 300 | 364 | 3.83e-29 | 115 |
| MS.gene31281.t1 | MTR_7g445950 | 39.231 | 130 | 76 | 1 | 142 | 271 | 55 | 181 | 1.46e-22 | 92.8 |
| MS.gene31281.t1 | MTR_7g446070 | 52.055 | 73 | 35 | 0 | 199 | 271 | 121 | 193 | 1.18e-19 | 85.5 |
| MS.gene31281.t1 | MTR_7g446110 | 56.061 | 66 | 29 | 0 | 210 | 275 | 187 | 252 | 5.48e-19 | 84.7 |
| MS.gene31281.t1 | MTR_7g445980 | 47.619 | 84 | 43 | 1 | 193 | 275 | 16 | 99 | 7.06e-19 | 80.5 |
| MS.gene31281.t1 | MTR_7g112330 | 57.778 | 45 | 19 | 0 | 201 | 245 | 13 | 57 | 1.67e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31281.t1 | AT1G08010 | 41.115 | 287 | 137 | 11 | 8 | 274 | 10 | 284 | 7.28e-55 | 181 |
| MS.gene31281.t1 | AT1G08010 | 41.115 | 287 | 137 | 11 | 8 | 274 | 10 | 284 | 7.28e-55 | 181 |
| MS.gene31281.t1 | AT1G08010 | 41.115 | 287 | 137 | 11 | 8 | 274 | 10 | 284 | 7.28e-55 | 181 |
| MS.gene31281.t1 | AT1G08000 | 40.441 | 272 | 145 | 8 | 14 | 274 | 17 | 282 | 2.94e-52 | 174 |
| MS.gene31281.t1 | AT1G08000 | 40.441 | 272 | 145 | 8 | 14 | 274 | 17 | 282 | 2.94e-52 | 174 |
| MS.gene31281.t1 | AT2G28340 | 35.943 | 281 | 138 | 10 | 5 | 274 | 6 | 255 | 6.38e-40 | 141 |
| MS.gene31281.t1 | AT3G54810 | 70.238 | 84 | 25 | 0 | 201 | 284 | 220 | 303 | 1.32e-34 | 128 |
| MS.gene31281.t1 | AT3G54810 | 70.238 | 84 | 25 | 0 | 201 | 284 | 220 | 303 | 1.32e-34 | 128 |
| MS.gene31281.t1 | AT4G32890 | 49.640 | 139 | 52 | 4 | 139 | 274 | 138 | 261 | 2.33e-33 | 124 |
| MS.gene31281.t1 | AT3G24050 | 64.286 | 84 | 27 | 1 | 194 | 274 | 175 | 258 | 3.93e-33 | 123 |
| MS.gene31281.t1 | AT4G36240 | 42.759 | 145 | 68 | 3 | 140 | 284 | 109 | 238 | 1.15e-31 | 118 |
| MS.gene31281.t1 | AT5G25830 | 47.368 | 152 | 59 | 5 | 140 | 274 | 136 | 283 | 2.12e-31 | 120 |
| MS.gene31281.t1 | AT3G60530 | 68.354 | 79 | 22 | 1 | 199 | 274 | 144 | 222 | 3.38e-31 | 117 |
| MS.gene31281.t1 | AT2G45050 | 59.140 | 93 | 35 | 1 | 185 | 274 | 151 | 243 | 1.98e-30 | 115 |
| MS.gene31281.t1 | AT5G66320 | 59.574 | 94 | 27 | 2 | 185 | 274 | 227 | 313 | 1.39e-29 | 115 |
| MS.gene31281.t1 | AT5G66320 | 59.574 | 94 | 27 | 2 | 185 | 274 | 227 | 313 | 1.39e-29 | 115 |
| MS.gene31281.t1 | AT4G34680 | 62.500 | 80 | 28 | 1 | 197 | 274 | 165 | 244 | 2.38e-29 | 113 |
| MS.gene31281.t1 | AT4G34680 | 62.500 | 80 | 28 | 1 | 197 | 274 | 165 | 244 | 2.38e-29 | 113 |
| MS.gene31281.t1 | AT3G51080 | 72.308 | 65 | 18 | 0 | 210 | 274 | 221 | 285 | 3.99e-28 | 110 |
| MS.gene31281.t1 | AT3G45170 | 51.111 | 90 | 44 | 0 | 185 | 274 | 90 | 179 | 6.31e-27 | 105 |
| MS.gene31281.t1 | AT5G26930 | 54.762 | 42 | 19 | 0 | 204 | 245 | 20 | 61 | 3.58e-11 | 60.1 |
| MS.gene31281.t1 | AT4G26150 | 32.710 | 107 | 60 | 2 | 136 | 240 | 133 | 229 | 4.32e-11 | 63.5 |
| MS.gene31281.t1 | AT2G18380 | 40.278 | 72 | 34 | 2 | 180 | 242 | 53 | 124 | 6.46e-11 | 61.2 |
Find 65 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTCGGGCACGCTTTAC+TGG | 0.142278 | 2.4:-7872523 | None:intergenic |
| CTGTTCGCCGGCCGGTATTC+AGG | 0.236111 | 2.4:-7872844 | None:intergenic |
| GCTTCCTCAGTTGAGAATTC+TGG | 0.240866 | 2.4:+7872481 | MS.gene31281:CDS |
| TTCTTTCATTGCTAGCTTAC+AGG | 0.246670 | 2.4:+7872585 | MS.gene31281:CDS |
| ACACTGTCCTACAGAATTTC+CGG | 0.284166 | 2.4:-7872983 | None:intergenic |
| ACAAGCATTGCAGAGCGTTT+TGG | 0.323869 | 2.4:-7872791 | None:intergenic |
| AGAACTGCTGGACCAATATA+TGG | 0.343881 | 2.4:+7872370 | MS.gene31281:CDS |
| AGAGAAGCCTTCCCCGAGTT+GGG | 0.363900 | 2.4:-7869269 | None:intergenic |
| TACTTCGGGCACGCTTTACT+GGG | 0.367389 | 2.4:-7872522 | None:intergenic |
| AGGACGACGGCGTTTACTTC+GGG | 0.370626 | 2.4:-7872536 | None:intergenic |
| TAGTCATCAAAGACGGTGTT+AGG | 0.392164 | 2.4:+7872929 | MS.gene31281:CDS |
| TTCCGAATATGAAGGGATCT+TGG | 0.400481 | 2.4:+7869059 | None:intergenic |
| GAAGAAGATTGGAGTGCTCT+TGG | 0.409178 | 2.4:+7869178 | MS.gene31281:CDS |
| CAAATACTGCTGAAGAAGAT+TGG | 0.423472 | 2.4:+7869167 | MS.gene31281:CDS |
| TAGAAAGGGGCATTCTGCTT+GGG | 0.445514 | 2.4:-7872403 | None:intergenic |
| AAAGAAGCGGCAAGAACTGC+TGG | 0.447119 | 2.4:+7872358 | MS.gene31281:CDS |
| CACTGTCCTACAGAATTTCC+GGG | 0.456379 | 2.4:-7872982 | None:intergenic |
| TTGGCTTCATCAAATGTTCC+CGG | 0.465571 | 2.4:+7872964 | MS.gene31281:CDS |
| ACAAAAGTGGGGCTGTTCGC+CGG | 0.466878 | 2.4:-7872856 | None:intergenic |
| TCTGTAGGACAGTGTTATCC+TGG | 0.467939 | 2.4:+7872991 | MS.gene31281:CDS |
| AATACAGGATTTAAGCTTGA+AGG | 0.479268 | 2.4:-7872556 | None:intergenic |
| ATGAAAGAAATCGAGAATAC+AGG | 0.480881 | 2.4:-7872571 | None:intergenic |
| ATGCTTGTGGTGTTCGGTAC+AGG | 0.486984 | 2.4:+7872806 | MS.gene31281:CDS |
| ATAGAAAGGGGCATTCTGCT+TGG | 0.489652 | 2.4:-7872404 | None:intergenic |
| AAACAGTCACAAGAAGGTTC+TGG | 0.490245 | 2.4:+7872894 | MS.gene31281:CDS |
| ACATTTGATGAAGCCAACTT+AGG | 0.491700 | 2.4:-7872958 | None:intergenic |
| AAGGACGACGGCGTTTACTT+CGG | 0.496252 | 2.4:-7872537 | None:intergenic |
| TCTGCAATGCTTGTGGTGTT+CGG | 0.497409 | 2.4:+7872800 | MS.gene31281:CDS |
| CAGAGAAGCCTTCCCCGAGT+TGG | 0.499799 | 2.4:-7869270 | None:intergenic |
| TGTGGTGTTCGGTACAGGTC+TGG | 0.506214 | 2.4:+7872811 | MS.gene31281:CDS |
| TGCACAGATGCTACAAAAGT+GGG | 0.515410 | 2.4:-7872868 | None:intergenic |
| AAAATGAGAATCCCCAACTC+GGG | 0.526899 | 2.4:+7869257 | MS.gene31281:CDS |
| GCACGCTTTACTGGGATGAC+AGG | 0.530384 | 2.4:-7872514 | None:intergenic |
| AAGTGGGGCTGTTCGCCGGC+CGG | 0.532753 | 2.4:-7872852 | None:intergenic |
| TGTTAGGATCCGTCCTAAGT+TGG | 0.534235 | 2.4:+7872945 | MS.gene31281:CDS |
| CCGGCCGGTATTCAGGATAG+AGG | 0.538514 | 2.4:-7872837 | None:intergenic |
| TTCCCCAATAATAAAAGAAG+CGG | 0.551958 | 2.4:+7872345 | MS.gene31281:CDS |
| GTGCACAGATGCTACAAAAG+TGG | 0.558433 | 2.4:-7872869 | None:intergenic |
| TTGGGTCCCTCTCTCCATTG+TGG | 0.572384 | 2.4:-7872763 | None:intergenic |
| GAGAAGCCTTCCCCGAGTTG+GGG | 0.575311 | 2.4:-7869268 | None:intergenic |
| GAGAATCCCCAACTCGGGGA+AGG | 0.582084 | 2.4:+7869262 | MS.gene31281:CDS |
| TTGATGAAGCCAACTTAGGA+CGG | 0.591529 | 2.4:-7872954 | None:intergenic |
| GTCGCCTCTATCCTGAATAC+CGG | 0.595004 | 2.4:+7872833 | MS.gene31281:CDS |
| AAAACGCTCTGCAATGCTTG+TGG | 0.598857 | 2.4:+7872793 | MS.gene31281:CDS |
| GAGATCATCGAAAGTCTCAT+CGG | 0.601725 | 2.4:-7869110 | None:intergenic |
| AGTTGTGCTTCAATACAGCC+CGG | 0.602280 | 2.4:+7872435 | MS.gene31281:CDS |
| CAGGATATTCCGAATATGAA+GGG | 0.603930 | 2.4:+7869052 | None:intergenic |
| AATGTTCCCGGAAATTCTGT+AGG | 0.604813 | 2.4:+7872976 | MS.gene31281:CDS |
| GAGAAAGTGCACACATTGTG+AGG | 0.609475 | 2.4:+7872729 | MS.gene31281:CDS |
| TTTGCGTCCACATCTTCCAA+TGG | 0.611208 | 2.4:-7869148 | None:intergenic |
| GAGACTCCACAATGGAGAGA+GGG | 0.617903 | 2.4:+7872757 | MS.gene31281:CDS |
| AGAGACTCCACAATGGAGAG+AGG | 0.626282 | 2.4:+7872756 | MS.gene31281:CDS |
| GCACTCAAACAGTCACAAGA+AGG | 0.630356 | 2.4:+7872888 | MS.gene31281:CDS |
| GTGTCCCCAGCAGTATTCTG+TGG | 0.631226 | 2.4:+7869226 | MS.gene31281:CDS |
| GACAACTGACTCTTGTGATG+AGG | 0.655145 | 2.4:-7872704 | None:intergenic |
| CCTCTATCCTGAATACCGGC+CGG | 0.661479 | 2.4:+7872837 | MS.gene31281:CDS |
| AAAGCCAGAATTCTCAACTG+AGG | 0.662049 | 2.4:-7872485 | None:intergenic |
| GATTTAAGCTTGAAGGACGA+CGG | 0.671757 | 2.4:-7872549 | None:intergenic |
| AAATGAGAATCCCCAACTCG+GGG | 0.675438 | 2.4:+7869258 | MS.gene31281:CDS |
| TTTACCACAGAATACTGCTG+GGG | 0.680114 | 2.4:-7869230 | None:intergenic |
| AAGAAGGTTCTGGAGATGCG+AGG | 0.680850 | 2.4:+7872904 | MS.gene31281:CDS |
| CGAGGCGTAGTCATCAAAGA+CGG | 0.686995 | 2.4:+7872922 | MS.gene31281:CDS |
| CAATGGAGAGAGGGACCCAA+CGG | 0.691262 | 2.4:+7872766 | MS.gene31281:CDS |
| GCACAGATGCTACAAAAGTG+GGG | 0.711092 | 2.4:-7872867 | None:intergenic |
| AGGTCACAGAGACTCCACAA+TGG | 0.715521 | 2.4:+7872749 | MS.gene31281:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGGAAATATAAAAAT+CGG | - | chr2.4:7872285-7872304 | None:intergenic | 10.0% |
| !! | ATAGTATTAAAATAAAAACT+GGG | + | chr2.4:7870808-7870827 | MS.gene31281:intron | 10.0% |
| !!! | ATTTTTAATTTAATCAAAAC+AGG | - | chr2.4:7870614-7870633 | None:intergenic | 10.0% |
| !!! | TTATTTTAATACTATCAATA+AGG | - | chr2.4:7870803-7870822 | None:intergenic | 10.0% |
| !! | AAACAGTAAAATAAAGATAT+AGG | + | chr2.4:7871299-7871318 | MS.gene31281:intron | 15.0% |
| !! | GATAGTATTAAAATAAAAAC+TGG | + | chr2.4:7870807-7870826 | MS.gene31281:intron | 15.0% |
| !! | TAGTATTAAAATAAAAACTG+GGG | + | chr2.4:7870809-7870828 | MS.gene31281:intron | 15.0% |
| !! | TTGAATTTAATAATTGAAAG+AGG | - | chr2.4:7872211-7872230 | None:intergenic | 15.0% |
| !!! | TTTTTTGACAAGAATTTTAA+TGG | + | chr2.4:7869082-7869101 | MS.gene31281:CDS | 15.0% |
| !! | AACTATATATAAACAATGCT+TGG | + | chr2.4:7871670-7871689 | MS.gene31281:intron | 20.0% |
| !! | AATAATTGAAAGAGGAAATT+GGG | - | chr2.4:7872203-7872222 | None:intergenic | 20.0% |
| !! | ACATATAAGATAAAATCCAA+AGG | + | chr2.4:7869967-7869986 | MS.gene31281:intron | 20.0% |
| !! | ACTAATAAAAATATGATGAG+CGG | + | chr2.4:7870504-7870523 | MS.gene31281:intron | 20.0% |
| !! | AGTAAAGAAACAGAAAAAAA+GGG | + | chr2.4:7872651-7872670 | MS.gene31281:CDS | 20.0% |
| !! | ATAGATCATCTCAAATAAAA+CGG | - | chr2.4:7869521-7869540 | None:intergenic | 20.0% |
| !! | ATGGATAGTTATCAATTATA+AGG | - | chr2.4:7872251-7872270 | None:intergenic | 20.0% |
| !! | GTAAAATAAAGATATAGGTT+AGG | + | chr2.4:7871304-7871323 | MS.gene31281:intron | 20.0% |
| !! | GTCAAATCATCAAAATAATA+AGG | - | chr2.4:7872117-7872136 | None:intergenic | 20.0% |
| !! | TAATAATTGAAAGAGGAAAT+TGG | - | chr2.4:7872204-7872223 | None:intergenic | 20.0% |
| !! | TATCATCAAAACAACAAAAA+AGG | - | chr2.4:7872300-7872319 | None:intergenic | 20.0% |
| !! | TCATTTATTACAAAGTAGTT+TGG | - | chr2.4:7869743-7869762 | None:intergenic | 20.0% |
| !! | TTATATGTTTCGAAACAATT+CGG | + | chr2.4:7870403-7870422 | MS.gene31281:intron | 20.0% |
| !!! | AACTTTTTTTTCATAGAAAG+GGG | - | chr2.4:7872419-7872438 | None:intergenic | 20.0% |
| !!! | ACAACTTTTTTTTCATAGAA+AGG | - | chr2.4:7872421-7872440 | None:intergenic | 20.0% |
| !!! | ACATTTAAGTTCATGTTATA+AGG | - | chr2.4:7871505-7871524 | None:intergenic | 20.0% |
| !!! | CAACTTTTTTTTCATAGAAA+GGG | - | chr2.4:7872420-7872439 | None:intergenic | 20.0% |
| !!! | GTGTGTTTAATTTTGTTAAA+GGG | + | chr2.4:7871414-7871433 | MS.gene31281:intron | 20.0% |
| !!! | TACTCATAACTTGTATTTTT+TGG | + | chr2.4:7871613-7871632 | MS.gene31281:intron | 20.0% |
| !!! | TGGAGTTTATTTGTTTATTT+TGG | + | chr2.4:7870769-7870788 | MS.gene31281:intron | 20.0% |
| !!! | TGTGTGTTTAATTTTGTTAA+AGG | + | chr2.4:7871413-7871432 | MS.gene31281:intron | 20.0% |
| !!! | TGTGTTTAATTTTGTTAAAG+GGG | + | chr2.4:7871415-7871434 | MS.gene31281:intron | 20.0% |
| ! | AAAGTAAACTAGAATAGTGT+CGG | + | chr2.4:7869680-7869699 | MS.gene31281:intron | 25.0% |
| ! | AATGAAACAGAAAATGATGA+CGG | + | chr2.4:7871977-7871996 | MS.gene31281:intron | 25.0% |
| ! | AATTACCAATCATCATTGTT+CGG | + | chr2.4:7871369-7871388 | MS.gene31281:intron | 25.0% |
| ! | ACTGAAAAAACATCAAAACA+CGG | - | chr2.4:7869208-7869227 | None:intergenic | 25.0% |
| ! | AGATAACAAACATCAAAGTA+TGG | - | chr2.4:7869339-7869358 | None:intergenic | 25.0% |
| ! | AGTTATCAATTATAAGGCTA+TGG | - | chr2.4:7872245-7872264 | None:intergenic | 25.0% |
| ! | ATACTATCAATAAGGATCTA+CGG | - | chr2.4:7870795-7870814 | None:intergenic | 25.0% |
| ! | CAATACGATTTACTCATTAT+CGG | + | chr2.4:7870976-7870995 | MS.gene31281:intron | 25.0% |
| ! | GAGTAAAGAAACAGAAAAAA+AGG | + | chr2.4:7872650-7872669 | MS.gene31281:CDS | 25.0% |
| ! | TAAAATGAACAACAATACCA+TGG | + | chr2.4:7871447-7871466 | MS.gene31281:intron | 25.0% |
| ! | TCGCTACTTATGATATAATA+TGG | + | chr2.4:7869310-7869329 | MS.gene31281:intron | 25.0% |
| ! | TGTTTCCCTCAAAAAAAAAA+AGG | - | chr2.4:7871473-7871492 | None:intergenic | 25.0% |
| ! | TTCTACAATAAATGATCGTA+AGG | - | chr2.4:7870238-7870257 | None:intergenic | 25.0% |
| !! | ACAACTAGAATATTTTACGT+AGG | + | chr2.4:7869614-7869633 | MS.gene31281:intron | 25.0% |
| !! | ACGTATCTTTTGGTATAAAT+CGG | - | chr2.4:7870149-7870168 | None:intergenic | 25.0% |
| !! | ATCTTCATATACGTATCTTT+TGG | - | chr2.4:7870159-7870178 | None:intergenic | 25.0% |
| !! | CTCTGAAAAATTTCAACTTT+AGG | - | chr2.4:7871136-7871155 | None:intergenic | 25.0% |
| !! | GGAATAGTTTTTCCATATAT+TGG | - | chr2.4:7872385-7872404 | None:intergenic | 25.0% |
| !! | TTGCAAATGTTTGGTTATTT+TGG | + | chr2.4:7871696-7871715 | MS.gene31281:intron | 25.0% |
| !!! | CTAAAGTTGAAATTTTTCAG+AGG | + | chr2.4:7871134-7871153 | MS.gene31281:intron | 25.0% |
| !!! | GCTAAATTTAAGTTGTGTAA+TGG | + | chr2.4:7871341-7871360 | MS.gene31281:intron | 25.0% |
| !!! | GTGTTTAATTTTGTTAAAGG+GGG | + | chr2.4:7871416-7871435 | MS.gene31281:intron | 25.0% |
| !!! | TTGTTGTTTTGATGATAACT+TGG | + | chr2.4:7872303-7872322 | MS.gene31281:intron | 25.0% |
| AAAATAAAAACTGGGGCAAA+AGG | + | chr2.4:7870816-7870835 | MS.gene31281:intron | 30.0% | |
| AAAGAGATCGAGAAAAAGTT+AGG | - | chr2.4:7870267-7870286 | None:intergenic | 30.0% | |
| AAGTTCATGTTATAAGGCTA+TGG | - | chr2.4:7871499-7871518 | None:intergenic | 30.0% | |
| AATACAGGATTTAAGCTTGA+AGG | - | chr2.4:7872559-7872578 | None:intergenic | 30.0% | |
| ATGAAAGAAATCGAGAATAC+AGG | - | chr2.4:7872574-7872593 | None:intergenic | 30.0% | |
| ATGTTAACATTTCCTCCTAA+AGG | - | chr2.4:7869584-7869603 | None:intergenic | 30.0% | |
| CAGTCAAATCAAATCCAAAA+TGG | + | chr2.4:7870451-7870470 | MS.gene31281:intron | 30.0% | |
| CGATAATGAGTAAATCGTAT+TGG | - | chr2.4:7870978-7870997 | None:intergenic | 30.0% | |
| CTTGGATCTCATTACAATTT+CGG | - | chr2.4:7872067-7872086 | None:intergenic | 30.0% | |
| GATAGTATTTGGTAAATGGT+GGG | + | chr2.4:7871809-7871828 | MS.gene31281:intron | 30.0% | |
| GTGTGATAGTATTTGGTAAA+TGG | + | chr2.4:7871805-7871824 | MS.gene31281:intron | 30.0% | |
| GTTAATAGCAGATGAAACAA+GGG | - | chr2.4:7871056-7871075 | None:intergenic | 30.0% | |
| TAATGAGTAAATCGTATTGG+CGG | - | chr2.4:7870975-7870994 | None:intergenic | 30.0% | |
| TCAGAAAGTAAGAAAGTTTC+TGG | + | chr2.4:7871646-7871665 | MS.gene31281:intron | 30.0% | |
| TGATAGTATTTGGTAAATGG+TGG | + | chr2.4:7871808-7871827 | MS.gene31281:intron | 30.0% | |
| TGATTATCAATTGAGAACAG+CGG | + | chr2.4:7870693-7870712 | MS.gene31281:intron | 30.0% | |
| TTAATAAATTGTCCCCACTT+AGG | - | chr2.4:7869911-7869930 | None:intergenic | 30.0% | |
| TTCCCCAATAATAAAAGAAG+CGG | + | chr2.4:7872345-7872364 | MS.gene31281:CDS | 30.0% | |
| TTCTTAAGAGACAATAGTTC+AGG | + | chr2.4:7872021-7872040 | MS.gene31281:intron | 30.0% | |
| TTTAACGTTGTTACATTCCA+AGG | - | chr2.4:7870055-7870074 | None:intergenic | 30.0% | |
| ! | AAATTTGTTTCCTTAAGCAG+TGG | + | chr2.4:7871761-7871780 | MS.gene31281:intron | 30.0% |
| ! | TTCTTCTCTGTGTACATTTT+TGG | + | chr2.4:7871231-7871250 | MS.gene31281:intron | 30.0% |
| ! | TTTCAACTTTAGGAGCATAA+AGG | - | chr2.4:7871126-7871145 | None:intergenic | 30.0% |
| !! | CAAGTTTTTCGATTTTCCAT+TGG | + | chr2.4:7869132-7869151 | MS.gene31281:CDS | 30.0% |
| !! | TGGATTTGATTTGACTGTTA+GGG | - | chr2.4:7870448-7870467 | None:intergenic | 30.0% |
| !! | TTGCCGCTTCTTTTATTATT+GGG | - | chr2.4:7872351-7872370 | None:intergenic | 30.0% |
| !! | TTGGATTTGATTTGACTGTT+AGG | - | chr2.4:7870449-7870468 | None:intergenic | 30.0% |
| !! | TTTTATTAGTTGTTTTGCGC+TGG | - | chr2.4:7870494-7870513 | None:intergenic | 30.0% |
| !!! | CATGGCCTTTTTTTTTTTGA+GGG | + | chr2.4:7871465-7871484 | MS.gene31281:intron | 30.0% |
| AAAAATGAGAATCCCCAACT+CGG | + | chr2.4:7869256-7869275 | MS.gene31281:CDS | 35.0% | |
| AACAACGTTAAAACCCCTTA+GGG | + | chr2.4:7870063-7870082 | MS.gene31281:intron | 35.0% | |
| AACAGAAATTGCTTTGTGCA+AGG | - | chr2.4:7871857-7871876 | None:intergenic | 35.0% | |
| AAGTTTAGTTGCATCCTCAA+TGG | + | chr2.4:7869861-7869880 | MS.gene31281:intron | 35.0% | |
| AAGTTTCTGCAAAATCGAAC+GGG | - | chr2.4:7871213-7871232 | None:intergenic | 35.0% | |
| ACAGAAATTGCTTTGTGCAA+GGG | - | chr2.4:7871856-7871875 | None:intergenic | 35.0% | |
| ACATTTGATGAAGCCAACTT+AGG | - | chr2.4:7872961-7872980 | None:intergenic | 35.0% | |
| AGGGTCCAGTTATTTAATAC+TGG | - | chr2.4:7871837-7871856 | None:intergenic | 35.0% | |
| ATCAATTATCAGATGCTGTC+AGG | - | chr2.4:7872139-7872158 | None:intergenic | 35.0% | |
| ATCTCAAATAAAACGGTCGA+TGG | - | chr2.4:7869514-7869533 | None:intergenic | 35.0% | |
| CAAATACTGCTGAAGAAGAT+TGG | + | chr2.4:7869167-7869186 | MS.gene31281:CDS | 35.0% | |
| CCTCAAAAAAAAAAAGGCCA+TGG | - | chr2.4:7871467-7871486 | None:intergenic | 35.0% | |
| CGAAACATATAATCACACAG+AGG | - | chr2.4:7870395-7870414 | None:intergenic | 35.0% | |
| CGTGACATGTAGATTGAATT+TGG | + | chr2.4:7869763-7869782 | MS.gene31281:intron | 35.0% | |
| CTCGAGACTACAAATTTACA+TGG | - | chr2.4:7871576-7871595 | None:intergenic | 35.0% | |
| GAAGTTTCTGCAAAATCGAA+CGG | - | chr2.4:7871214-7871233 | None:intergenic | 35.0% | |
| GGAAGATAATAACGAGAGAA+TGG | - | chr2.4:7870293-7870312 | None:intergenic | 35.0% | |
| GGGATCCAGTATTAAATAAC+TGG | + | chr2.4:7871829-7871848 | MS.gene31281:intron | 35.0% | |
| GGTTAATAGCAGATGAAACA+AGG | - | chr2.4:7871057-7871076 | None:intergenic | 35.0% | |
| GTGTCTTGTGTGATAGTATT+TGG | + | chr2.4:7871798-7871817 | MS.gene31281:intron | 35.0% | |
| TAACAACGTTAAAACCCCTT+AGG | + | chr2.4:7870062-7870081 | MS.gene31281:intron | 35.0% | |
| TTCAGAGGTTTCACAACAAA+GGG | + | chr2.4:7871149-7871168 | MS.gene31281:intron | 35.0% | |
| TTTCAGAGGTTTCACAACAA+AGG | + | chr2.4:7871148-7871167 | MS.gene31281:intron | 35.0% | |
| ! | AATTGGGTGATATGCTACTT+TGG | - | chr2.4:7872187-7872206 | None:intergenic | 35.0% |
| ! | ATTTTACCACAGAATACTGC+TGG | - | chr2.4:7869235-7869254 | None:intergenic | 35.0% |
| ! | ATTTTCCATCATCAGCCTAA+AGG | + | chr2.4:7870314-7870333 | MS.gene31281:intron | 35.0% |
| ! | GATGGTTTTCATCTAGAAGT+TGG | + | chr2.4:7870749-7870768 | MS.gene31281:intron | 35.0% |
| ! | TGTTTGCTAGAGATTCAGTT+AGG | + | chr2.4:7869824-7869843 | MS.gene31281:intron | 35.0% |
| ! | TTCTTTCATTGCTAGCTTAC+AGG | + | chr2.4:7872585-7872604 | MS.gene31281:CDS | 35.0% |
| ! | TTTGAGATGATCTATGCTGA+AGG | + | chr2.4:7869526-7869545 | MS.gene31281:intron | 35.0% |
| ! | TTTTACCACAGAATACTGCT+GGG | - | chr2.4:7869234-7869253 | None:intergenic | 35.0% |
| ! | TTTTGCTGAACTTTGAACTC+AGG | + | chr2.4:7869558-7869577 | MS.gene31281:intron | 35.0% |
| !! | ATGAGTACGAAAGTGTTGTT+AGG | - | chr2.4:7871600-7871619 | None:intergenic | 35.0% |
| !! | CATTTTTGGATGGCATTAGA+AGG | + | chr2.4:7871245-7871264 | MS.gene31281:intron | 35.0% |
| !! | CTTGCCGCTTCTTTTATTAT+TGG | - | chr2.4:7872352-7872371 | None:intergenic | 35.0% |
| !! | TCTCTGTGTACATTTTTGGA+TGG | + | chr2.4:7871235-7871254 | MS.gene31281:intron | 35.0% |
| !! | TGCCGCTTCTTTTATTATTG+GGG | - | chr2.4:7872350-7872369 | None:intergenic | 35.0% |
| !! | TTAGGCTGATGATGGAAAAT+GGG | - | chr2.4:7870314-7870333 | None:intergenic | 35.0% |
| !! | TTTAGGCTGATGATGGAAAA+TGG | - | chr2.4:7870315-7870334 | None:intergenic | 35.0% |
| !!! | CCATGGCCTTTTTTTTTTTG+AGG | + | chr2.4:7871464-7871483 | MS.gene31281:intron | 35.0% |
| AAAATCGGATGCAGCATCAA+TGG | - | chr2.4:7872270-7872289 | None:intergenic | 40.0% | |
| AAAATGAGAATCCCCAACTC+GGG | + | chr2.4:7869257-7869276 | MS.gene31281:CDS | 40.0% | |
| AAACAGTCACAAGAAGGTTC+TGG | + | chr2.4:7872894-7872913 | MS.gene31281:CDS | 40.0% | |
| AAAGCCAGAATTCTCAACTG+AGG | - | chr2.4:7872488-7872507 | None:intergenic | 40.0% | |
| AAAGTGGCTGAAACTAGACT+TGG | + | chr2.4:7871917-7871936 | MS.gene31281:intron | 40.0% | |
| AACAAAGGGAAGAGGAAAGT+AGG | + | chr2.4:7871163-7871182 | MS.gene31281:intron | 40.0% | |
| AACCTCAAAGTTGAGTGTAG+AGG | + | chr2.4:7870119-7870138 | MS.gene31281:intron | 40.0% | |
| AACTTTGAACTCAGGCCTTT+AGG | + | chr2.4:7869566-7869585 | MS.gene31281:intron | 40.0% | |
| AAGTGGCTGAAACTAGACTT+GGG | + | chr2.4:7871918-7871937 | MS.gene31281:intron | 40.0% | |
| AATGTTCCCGGAAATTCTGT+AGG | + | chr2.4:7872976-7872995 | MS.gene31281:CDS | 40.0% | |
| ACACTGTCCTACAGAATTTC+CGG | - | chr2.4:7872986-7873005 | None:intergenic | 40.0% | |
| ACAGAAAAAAAGGGAGCTCT+CGG | + | chr2.4:7872660-7872679 | MS.gene31281:CDS | 40.0% | |
| AGAACTGCTGGACCAATATA+TGG | + | chr2.4:7872370-7872389 | MS.gene31281:CDS | 40.0% | |
| AGACACAAGGGAATAGAAGA+TGG | + | chr2.4:7870731-7870750 | MS.gene31281:intron | 40.0% | |
| AGCACTGCGTTGAAGTATAA+TGG | - | chr2.4:7869429-7869448 | None:intergenic | 40.0% | |
| AGGTTAGGAAATGAGTCATC+TGG | + | chr2.4:7871319-7871338 | MS.gene31281:intron | 40.0% | |
| AGTTTCTGCAAAATCGAACG+GGG | - | chr2.4:7871212-7871231 | None:intergenic | 40.0% | |
| ATCCTCTACACTCAACTTTG+AGG | - | chr2.4:7870124-7870143 | None:intergenic | 40.0% | |
| ATCTAATCGTCCACTGCTTA+AGG | - | chr2.4:7871774-7871793 | None:intergenic | 40.0% | |
| ATGGGATTTGTGAAGACACA+AGG | + | chr2.4:7870718-7870737 | MS.gene31281:intron | 40.0% | |
| CAATTGAGAACAGCGGTAAT+GGG | + | chr2.4:7870700-7870719 | MS.gene31281:intron | 40.0% | |
| CAGCATCTCGAGGATAATTT+AGG | - | chr2.4:7871078-7871097 | None:intergenic | 40.0% | |
| CTGCCTTCAAAAACAGAAAC+CGG | - | chr2.4:7872457-7872476 | None:intergenic | 40.0% | |
| GAGAACCGAACAATGATGAT+TGG | - | chr2.4:7871377-7871396 | None:intergenic | 40.0% | |
| GAGATCATCGAAAGTCTCAT+CGG | - | chr2.4:7869113-7869132 | None:intergenic | 40.0% | |
| GATTTAAGCTTGAAGGACGA+CGG | - | chr2.4:7872552-7872571 | None:intergenic | 40.0% | |
| GCACTGCGTTGAAGTATAAT+GGG | - | chr2.4:7869428-7869447 | None:intergenic | 40.0% | |
| GCAGAATGTGAGTGAAAAAG+TGG | + | chr2.4:7869795-7869814 | MS.gene31281:intron | 40.0% | |
| GCTAGAGATTCAGTTAGGAA+GGG | + | chr2.4:7869829-7869848 | MS.gene31281:intron | 40.0% | |
| GCTTGGAGTTTGCAAATGTT+TGG | + | chr2.4:7871687-7871706 | MS.gene31281:intron | 40.0% | |
| TACTCATTATCGGCAGTAAC+AGG | + | chr2.4:7870986-7871005 | MS.gene31281:intron | 40.0% | |
| TAGTCATCAAAGACGGTGTT+AGG | + | chr2.4:7872929-7872948 | MS.gene31281:CDS | 40.0% | |
| TCAATTGAGAACAGCGGTAA+TGG | + | chr2.4:7870699-7870718 | MS.gene31281:intron | 40.0% | |
| TGCACAGATGCTACAAAAGT+GGG | - | chr2.4:7872871-7872890 | None:intergenic | 40.0% | |
| TGCCTTCAAAAACAGAAACC+GGG | - | chr2.4:7872456-7872475 | None:intergenic | 40.0% | |
| TGCTAGAGATTCAGTTAGGA+AGG | + | chr2.4:7869828-7869847 | MS.gene31281:intron | 40.0% | |
| TGGGATTTGTGAAGACACAA+GGG | + | chr2.4:7870719-7870738 | MS.gene31281:intron | 40.0% | |
| TGTGATGCGAGATATACGAT+GGG | + | chr2.4:7870634-7870653 | MS.gene31281:intron | 40.0% | |
| TTCAGCTTAACCAGGATTCT+CGG | + | chr2.4:7870016-7870035 | MS.gene31281:intron | 40.0% | |
| TTGATGAAGCCAACTTAGGA+CGG | - | chr2.4:7872957-7872976 | None:intergenic | 40.0% | |
| TTGATGAAGCCTCTTGAGTT+TGG | + | chr2.4:7871893-7871912 | MS.gene31281:intron | 40.0% | |
| TTGGCTTCATCAAATGTTCC+CGG | + | chr2.4:7872964-7872983 | MS.gene31281:CDS | 40.0% | |
| TTGTGATGCGAGATATACGA+TGG | + | chr2.4:7870633-7870652 | MS.gene31281:intron | 40.0% | |
| TTTACCACAGAATACTGCTG+GGG | - | chr2.4:7869233-7869252 | None:intergenic | 40.0% | |
| TTTAGCAAGTCACTGTGCAA+AGG | - | chr2.4:7869663-7869682 | None:intergenic | 40.0% | |
| TTTAGTTGCATCCTCAATGG+CGG | + | chr2.4:7869864-7869883 | MS.gene31281:intron | 40.0% | |
| ! | CGATTTTCCATTGGAAGATG+TGG | + | chr2.4:7869141-7869160 | MS.gene31281:CDS | 40.0% |
| ! | TAAAACGGTCGATGGATTCA+TGG | - | chr2.4:7869506-7869525 | None:intergenic | 40.0% |
| ! | TACATTAAGCAGAGCATCAG+AGG | - | chr2.4:7870904-7870923 | None:intergenic | 40.0% |
| ! | TTGCGTCATGAAGACCATTT+TGG | - | chr2.4:7870468-7870487 | None:intergenic | 40.0% |
| !! | AAACTAGAATAGTGTCGGCT+AGG | + | chr2.4:7869685-7869704 | MS.gene31281:intron | 40.0% |
| !! | TGATGACGGTTCAAGTATCT+TGG | + | chr2.4:7871991-7872010 | MS.gene31281:intron | 40.0% |
| !! | TGTGAGTGACTTGGTGTATT+TGG | + | chr2.4:7872090-7872109 | MS.gene31281:intron | 40.0% |
| AAAACGCTCTGCAATGCTTG+TGG | + | chr2.4:7872793-7872812 | MS.gene31281:CDS | 45.0% | |
| AAAGGTTAAGAAGTGGGTGG+TGG | + | chr2.4:7870834-7870853 | MS.gene31281:intron | 45.0% | |
| AAATGAGAATCCCCAACTCG+GGG | + | chr2.4:7869258-7869277 | MS.gene31281:CDS | 45.0% | |
| AACCAGATGATCTCCCTAAG+GGG | - | chr2.4:7870079-7870098 | None:intergenic | 45.0% | |
| AAGGTTAAGAAGTGGGTGGT+GGG | + | chr2.4:7870835-7870854 | MS.gene31281:intron | 45.0% | |
| ACCAAGTCACTCACAGAACT+TGG | - | chr2.4:7872085-7872104 | None:intergenic | 45.0% | |
| AGAATAACAGCAGCATCTCG+AGG | - | chr2.4:7871088-7871107 | None:intergenic | 45.0% | |
| AGAATCAAACCCGAGAATCC+TGG | - | chr2.4:7870029-7870048 | None:intergenic | 45.0% | |
| AGTAGCGACAGAATACTCAC+AGG | - | chr2.4:7869298-7869317 | None:intergenic | 45.0% | |
| AGTTGTGCTTCAATACAGCC+CGG | + | chr2.4:7872435-7872454 | MS.gene31281:CDS | 45.0% | |
| CACTGTCCTACAGAATTTCC+GGG | - | chr2.4:7872985-7873004 | None:intergenic | 45.0% | |
| CAGAAAAAAAGGGAGCTCTC+GGG | + | chr2.4:7872661-7872680 | MS.gene31281:CDS | 45.0% | |
| CCATCTCTTCTAAGCACCTT+TGG | - | chr2.4:7869986-7870005 | None:intergenic | 45.0% | |
| GAACCAGATGATCTCCCTAA+GGG | - | chr2.4:7870080-7870099 | None:intergenic | 45.0% | |
| GCAAAAGGTTAAGAAGTGGG+TGG | + | chr2.4:7870831-7870850 | MS.gene31281:intron | 45.0% | |
| GCACAGATGCTACAAAAGTG+GGG | - | chr2.4:7872870-7872889 | None:intergenic | 45.0% | |
| GCACTCAAACAGTCACAAGA+AGG | + | chr2.4:7872888-7872907 | MS.gene31281:CDS | 45.0% | |
| GCCTCTTGAGTTTGGTAAAG+TGG | + | chr2.4:7871901-7871920 | MS.gene31281:intron | 45.0% | |
| GCTTCCTCAGTTGAGAATTC+TGG | + | chr2.4:7872481-7872500 | MS.gene31281:CDS | 45.0% | |
| GGGGCAAAAGGTTAAGAAGT+GGG | + | chr2.4:7870828-7870847 | MS.gene31281:intron | 45.0% | |
| GGTTTCACAACAAAGGGAAG+AGG | + | chr2.4:7871155-7871174 | MS.gene31281:intron | 45.0% | |
| GTGCACAGATGCTACAAAAG+TGG | - | chr2.4:7872872-7872891 | None:intergenic | 45.0% | |
| TCAGCTTAACCAGGATTCTC+GGG | + | chr2.4:7870017-7870036 | MS.gene31281:intron | 45.0% | |
| TCCAAGTTCTGTGAGTGACT+TGG | + | chr2.4:7872081-7872100 | MS.gene31281:intron | 45.0% | |
| TCTGCAATGCTTGTGGTGTT+CGG | + | chr2.4:7872800-7872819 | MS.gene31281:CDS | 45.0% | |
| TCTGTAGGACAGTGTTATCC+TGG | + | chr2.4:7872991-7873010 | MS.gene31281:CDS | 45.0% | |
| TGAGTTGCTTCAGCTTAACC+AGG | + | chr2.4:7870008-7870027 | MS.gene31281:intron | 45.0% | |
| TGGATGGCATTAGAAGGCTT+TGG | + | chr2.4:7871251-7871270 | MS.gene31281:intron | 45.0% | |
| TGGGGCAAAAGGTTAAGAAG+TGG | + | chr2.4:7870827-7870846 | MS.gene31281:intron | 45.0% | |
| TGTTAGGATCCGTCCTAAGT+TGG | + | chr2.4:7872945-7872964 | MS.gene31281:CDS | 45.0% | |
| TTTGAACTCAGGCCTTTAGG+AGG | + | chr2.4:7869569-7869588 | MS.gene31281:intron | 45.0% | |
| TTTGCGTCCACATCTTCCAA+TGG | - | chr2.4:7869151-7869170 | None:intergenic | 45.0% | |
| ! | GAAGAAGATTGGAGTGCTCT+TGG | + | chr2.4:7869178-7869197 | MS.gene31281:CDS | 45.0% |
| ! | GACAACTGACTCTTGTGATG+AGG | - | chr2.4:7872707-7872726 | None:intergenic | 45.0% |
| ! | GAGAAAGTGCACACATTGTG+AGG | + | chr2.4:7872729-7872748 | MS.gene31281:CDS | 45.0% |
| ! | GCCACTTTACCAAACTCAAG+AGG | - | chr2.4:7871905-7871924 | None:intergenic | 45.0% |
| !! | ACAAGCATTGCAGAGCGTTT+TGG | - | chr2.4:7872794-7872813 | None:intergenic | 45.0% |
| !! | ATAGAAAGGGGCATTCTGCT+TGG | - | chr2.4:7872407-7872426 | None:intergenic | 45.0% |
| !! | CAAGCATTGCAGAGCGTTTT+GGG | - | chr2.4:7872793-7872812 | None:intergenic | 45.0% |
| !! | CCAAAGGTGCTTAGAAGAGA+TGG | + | chr2.4:7869983-7870002 | MS.gene31281:intron | 45.0% |
| !! | TAGAAAGGGGCATTCTGCTT+GGG | - | chr2.4:7872406-7872425 | None:intergenic | 45.0% |
| !!! | AGCCCGGTTTCTGTTTTTGA+AGG | + | chr2.4:7872451-7872470 | MS.gene31281:CDS | 45.0% |
| AAAGAAGCGGCAAGAACTGC+TGG | + | chr2.4:7872358-7872377 | MS.gene31281:CDS | 50.0% | |
| AACCCCTTAGGGAGATCATC+TGG | + | chr2.4:7870074-7870093 | MS.gene31281:intron | 50.0% | |
| AAGGACGACGGCGTTTACTT+CGG | - | chr2.4:7872540-7872559 | None:intergenic | 50.0% | |
| AGAGACTCCACAATGGAGAG+AGG | + | chr2.4:7872756-7872775 | MS.gene31281:CDS | 50.0% | |
| AGGTCACAGAGACTCCACAA+TGG | + | chr2.4:7872749-7872768 | MS.gene31281:CDS | 50.0% | |
| AGGTCTATGTTTGCCTGAGG+GGG | - | chr2.4:7870880-7870899 | None:intergenic | 50.0% | |
| AGGTTAAGAAGTGGGTGGTG+GGG | + | chr2.4:7870836-7870855 | MS.gene31281:intron | 50.0% | |
| ATGCGAGATATACGATGGGC+TGG | + | chr2.4:7870638-7870657 | MS.gene31281:intron | 50.0% | |
| ATGCTTGTGGTGTTCGGTAC+AGG | + | chr2.4:7872806-7872825 | MS.gene31281:CDS | 50.0% | |
| CAGGTCTATGTTTGCCTGAG+GGG | - | chr2.4:7870881-7870900 | None:intergenic | 50.0% | |
| CCCTGTGTGGAAAAACGGTA+GGG | + | chr2.4:7870344-7870363 | MS.gene31281:intron | 50.0% | |
| CGAGGCGTAGTCATCAAAGA+CGG | + | chr2.4:7872922-7872941 | MS.gene31281:CDS | 50.0% | |
| CTGTGCCCTGTGTGGAAAAA+CGG | + | chr2.4:7870339-7870358 | MS.gene31281:intron | 50.0% | |
| GAGACTCCACAATGGAGAGA+GGG | + | chr2.4:7872757-7872776 | MS.gene31281:CDS | 50.0% | |
| GCAGGTCTATGTTTGCCTGA+GGG | - | chr2.4:7870882-7870901 | None:intergenic | 50.0% | |
| GGAACCAGATGATCTCCCTA+AGG | - | chr2.4:7870081-7870100 | None:intergenic | 50.0% | |
| GTCGCCTCTATCCTGAATAC+CGG | + | chr2.4:7872833-7872852 | MS.gene31281:CDS | 50.0% | |
| GTGAGTGGCAACACCAACTT+TGG | + | chr2.4:7870942-7870961 | MS.gene31281:intron | 50.0% | |
| GTTAATCCCTCCAATCGCCT+GGG | - | chr2.4:7870102-7870121 | None:intergenic | 50.0% | |
| TACTTCGGGCACGCTTTACT+GGG | - | chr2.4:7872525-7872544 | None:intergenic | 50.0% | |
| TCGGGTTTGATTCTGAGCCT+TGG | + | chr2.4:7870035-7870054 | MS.gene31281:intron | 50.0% | |
| TGCTGAGCCTATTCTGTGAG+TGG | + | chr2.4:7870927-7870946 | MS.gene31281:intron | 50.0% | |
| TTACATTGATGCACCCCCTC+AGG | + | chr2.4:7870864-7870883 | MS.gene31281:intron | 50.0% | |
| TTACTTCGGGCACGCTTTAC+TGG | - | chr2.4:7872526-7872545 | None:intergenic | 50.0% | |
| TTCTGCAAAATCGAACGGGG+AGG | - | chr2.4:7871209-7871228 | None:intergenic | 50.0% | |
| ! | GGTGTTGCCACTCACAGAAT+AGG | - | chr2.4:7870937-7870956 | None:intergenic | 50.0% |
| ! | TTAAGCAGAGCATCAGAGGC+AGG | - | chr2.4:7870900-7870919 | None:intergenic | 50.0% |
| !! | AAGAAGGTTCTGGAGATGCG+AGG | + | chr2.4:7872904-7872923 | MS.gene31281:CDS | 50.0% |
| !! | AATGGCGGATTCAAGACCCT+GGG | + | chr2.4:7869879-7869898 | MS.gene31281:intron | 50.0% |
| !! | CCCTACCGTTTTTCCACACA+GGG | - | chr2.4:7870347-7870366 | None:intergenic | 50.0% |
| !! | TCCCTACCGTTTTTCCACAC+AGG | - | chr2.4:7870348-7870367 | None:intergenic | 50.0% |
| ACAAAAGTGGGGCTGTTCGC+CGG | - | chr2.4:7872859-7872878 | None:intergenic | 55.0% | |
| AGAGAAGCCTTCCCCGAGTT+GGG | - | chr2.4:7869272-7869291 | None:intergenic | 55.0% | |
| AGGACGACGGCGTTTACTTC+GGG | - | chr2.4:7872539-7872558 | None:intergenic | 55.0% | |
| CAATGGAGAGAGGGACCCAA+CGG | + | chr2.4:7872766-7872785 | MS.gene31281:CDS | 55.0% | |
| CAGCGCCTTTAGGCTGATGA+TGG | - | chr2.4:7870322-7870341 | None:intergenic | 55.0% | |
| CCTCTATCCTGAATACCGGC+CGG | + | chr2.4:7872837-7872856 | MS.gene31281:CDS | 55.0% | |
| GCACGCTTTACTGGGATGAC+AGG | - | chr2.4:7872517-7872536 | None:intergenic | 55.0% | |
| GCCCTGTGTGGAAAAACGGT+AGG | + | chr2.4:7870343-7870362 | MS.gene31281:intron | 55.0% | |
| GGCAGGTCTATGTTTGCCTG+AGG | - | chr2.4:7870883-7870902 | None:intergenic | 55.0% | |
| GGGTCTTGAATCCGCCATTG+AGG | - | chr2.4:7869878-7869897 | None:intergenic | 55.0% | |
| GGTTAATCCCTCCAATCGCC+TGG | - | chr2.4:7870103-7870122 | None:intergenic | 55.0% | |
| GTGTCCCCAGCAGTATTCTG+TGG | + | chr2.4:7869226-7869245 | MS.gene31281:CDS | 55.0% | |
| TGGCGGCACACTTCCAAAGT+TGG | - | chr2.4:7870958-7870977 | None:intergenic | 55.0% | |
| TGTGGTGTTCGGTACAGGTC+TGG | + | chr2.4:7872811-7872830 | MS.gene31281:CDS | 55.0% | |
| TTGGGTCCCTCTCTCCATTG+TGG | - | chr2.4:7872766-7872785 | None:intergenic | 55.0% | |
| ! | AGGGAGATCATCTGGTTCCC+AGG | + | chr2.4:7870082-7870101 | MS.gene31281:intron | 55.0% |
| ! | TCATCTGGTTCCCAGGCGAT+TGG | + | chr2.4:7870089-7870108 | MS.gene31281:intron | 55.0% |
| !! | CAATGGCGGATTCAAGACCC+TGG | + | chr2.4:7869878-7869897 | MS.gene31281:intron | 55.0% |
| !!! | CAGAGCGTTTTGGGACCGTT+GGG | - | chr2.4:7872784-7872803 | None:intergenic | 55.0% |
| ACACAGGGCACAGCGCCTTT+AGG | - | chr2.4:7870332-7870351 | None:intergenic | 60.0% | |
| ACCCTGGGTAAGCGCCTAAG+TGG | + | chr2.4:7869894-7869913 | MS.gene31281:intron | 60.0% | |
| CAGAGAAGCCTTCCCCGAGT+TGG | - | chr2.4:7869273-7869292 | None:intergenic | 60.0% | |
| CCCACTTAGGCGCTTACCCA+GGG | - | chr2.4:7869898-7869917 | None:intergenic | 60.0% | |
| CCCTGGGTAAGCGCCTAAGT+GGG | + | chr2.4:7869895-7869914 | MS.gene31281:intron | 60.0% | |
| CCGGCCGGTATTCAGGATAG+AGG | - | chr2.4:7872840-7872859 | None:intergenic | 60.0% | |
| CCTGGGTAAGCGCCTAAGTG+GGG | + | chr2.4:7869896-7869915 | MS.gene31281:intron | 60.0% | |
| CTGGTTCCCAGGCGATTGGA+GGG | + | chr2.4:7870093-7870112 | MS.gene31281:intron | 60.0% | |
| GAGAAGCCTTCCCCGAGTTG+GGG | - | chr2.4:7869271-7869290 | None:intergenic | 60.0% | |
| GAGAATCCCCAACTCGGGGA+AGG | + | chr2.4:7869262-7869281 | MS.gene31281:CDS | 60.0% | |
| ! | TCTGGTTCCCAGGCGATTGG+AGG | + | chr2.4:7870092-7870111 | MS.gene31281:intron | 60.0% |
| !! | TAAAGGCGCTGTGCCCTGTG+TGG | + | chr2.4:7870331-7870350 | MS.gene31281:intron | 60.0% |
| !!! | GCAGAGCGTTTTGGGACCGT+TGG | - | chr2.4:7872785-7872804 | None:intergenic | 60.0% |
| CCCCACTTAGGCGCTTACCC+AGG | - | chr2.4:7869899-7869918 | None:intergenic | 65.0% | |
| CTGTTCGCCGGCCGGTATTC+AGG | - | chr2.4:7872847-7872866 | None:intergenic | 65.0% | |
| AAGTGGGGCTGTTCGCCGGC+CGG | - | chr2.4:7872855-7872874 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 7869067 | 7873023 | 7869067 | ID=MS.gene31281 |
| chr2.4 | mRNA | 7869067 | 7873023 | 7869067 | ID=MS.gene31281.t1;Parent=MS.gene31281 |
| chr2.4 | exon | 7869067 | 7869297 | 7869067 | ID=MS.gene31281.t1.exon1;Parent=MS.gene31281.t1 |
| chr2.4 | CDS | 7869067 | 7869297 | 7869067 | ID=cds.MS.gene31281.t1;Parent=MS.gene31281.t1 |
| chr2.4 | exon | 7872334 | 7873023 | 7872334 | ID=MS.gene31281.t1.exon2;Parent=MS.gene31281.t1 |
| chr2.4 | CDS | 7872334 | 7873023 | 7872334 | ID=cds.MS.gene31281.t1;Parent=MS.gene31281.t1 |
| Gene Sequence |
| Protein sequence |
