AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68594

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68594.t1 MTR_2g094600 93.960 298 17 1 1 298 4 300 0.0 566
MS.gene68594.t1 MTR_4g058910 53.722 309 121 6 1 287 79 387 1.17e-92 280
MS.gene68594.t1 MTR_1g094930 46.774 186 71 6 121 278 26 211 5.37e-43 147
MS.gene68594.t1 MTR_1g094930 46.774 186 71 6 121 278 121 306 3.77e-42 148
MS.gene68594.t1 MTR_1g046680 50.000 142 47 3 137 278 119 236 3.49e-35 127
MS.gene68594.t1 MTR_1g116010 72.603 73 20 0 212 284 162 234 5.49e-34 124
MS.gene68594.t1 MTR_7g085410 66.667 84 28 0 199 282 173 256 7.62e-34 124
MS.gene68594.t1 MTR_6g032830 77.143 70 16 0 214 283 192 261 3.38e-33 122
MS.gene68594.t1 MTR_5g007600 70.130 77 23 0 202 278 247 323 4.06e-33 124
MS.gene68594.t1 MTR_5g007600 65.789 76 26 0 202 277 145 220 6.84e-30 115
MS.gene68594.t1 MTR_8g076340 48.936 141 62 4 139 278 151 282 9.27e-32 119
MS.gene68594.t1 MTR_1g006650 76.923 65 15 0 214 278 234 298 1.43e-31 120
MS.gene68594.t1 MTR_4g071590 75.385 65 16 0 214 278 211 275 2.95e-31 118
MS.gene68594.t1 MTR_4g471590 75.385 65 16 0 214 278 211 275 2.95e-31 118
MS.gene68594.t1 MTR_3g117380 67.123 73 24 0 206 278 221 293 3.58e-31 119
MS.gene68594.t1 MTR_8g013950 75.385 65 16 0 214 278 226 290 1.40e-29 115
MS.gene68594.t1 MTR_3g109760 75.385 65 16 0 214 278 207 271 2.51e-29 114
MS.gene68594.t1 MTR_5g021340 73.846 65 17 0 214 278 300 364 2.94e-29 115
MS.gene68594.t1 MTR_7g445950 39.231 130 76 1 146 275 55 181 1.29e-22 92.8
MS.gene68594.t1 MTR_7g446070 52.055 73 35 0 203 275 121 193 8.15e-20 85.5
MS.gene68594.t1 MTR_7g446110 56.061 66 29 0 214 279 187 252 3.90e-19 85.1
MS.gene68594.t1 MTR_7g445980 47.619 84 43 1 197 279 16 99 5.46e-19 80.5
MS.gene68594.t1 MTR_7g112330 57.778 45 19 0 205 249 13 57 1.44e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68594.t1 AT1G08010 40.000 285 143 10 12 278 10 284 2.09e-54 179
MS.gene68594.t1 AT1G08010 40.000 285 143 10 12 278 10 284 2.09e-54 179
MS.gene68594.t1 AT1G08010 40.000 285 143 10 12 278 10 284 2.09e-54 179
MS.gene68594.t1 AT1G08000 40.441 272 145 8 18 278 17 282 8.78e-53 175
MS.gene68594.t1 AT1G08000 40.441 272 145 8 18 278 17 282 8.78e-53 175
MS.gene68594.t1 AT2G28340 36.299 281 137 10 9 278 6 255 2.11e-40 142
MS.gene68594.t1 AT3G54810 70.238 84 25 0 205 288 220 303 9.50e-35 128
MS.gene68594.t1 AT3G54810 70.238 84 25 0 205 288 220 303 9.50e-35 128
MS.gene68594.t1 AT4G32890 49.640 139 52 4 143 278 138 261 1.57e-33 125
MS.gene68594.t1 AT3G24050 64.286 84 27 1 198 278 175 258 2.34e-33 123
MS.gene68594.t1 AT4G36240 42.759 145 68 3 144 288 109 238 7.32e-32 119
MS.gene68594.t1 AT5G25830 47.368 152 59 5 144 278 136 283 1.56e-31 120
MS.gene68594.t1 AT3G60530 68.354 79 22 1 203 278 144 222 2.63e-31 117
MS.gene68594.t1 AT2G45050 64.103 78 28 0 201 278 166 243 1.24e-30 116
MS.gene68594.t1 AT5G66320 59.574 94 27 2 189 278 227 313 8.07e-30 115
MS.gene68594.t1 AT5G66320 59.574 94 27 2 189 278 227 313 8.07e-30 115
MS.gene68594.t1 AT4G34680 62.500 80 28 1 201 278 165 244 2.33e-29 113
MS.gene68594.t1 AT4G34680 62.500 80 28 1 201 278 165 244 2.33e-29 113
MS.gene68594.t1 AT3G51080 72.308 65 18 0 214 278 221 285 2.26e-28 111
MS.gene68594.t1 AT3G45170 51.111 90 44 0 189 278 90 179 4.71e-27 105
MS.gene68594.t1 AT5G26930 54.762 42 19 0 208 249 20 61 3.11e-11 60.1
MS.gene68594.t1 AT4G26150 32.710 107 60 2 140 244 133 229 4.48e-11 63.2
MS.gene68594.t1 AT2G18380 40.278 72 34 2 184 246 53 124 5.17e-11 61.6

Find 61 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTTCGGGCACGCTTTAC+TGG 0.142278 2.2:-6798319 None:intergenic
CTGTTCGCCGGCCGGTATTC+AGG 0.236111 2.2:-6798640 None:intergenic
GCTTCCTCAGTTGAGAATTC+TGG 0.240866 2.2:+6798277 MS.gene68594:CDS
TTCTTTCATTGCTAGCTTAC+AGG 0.246670 2.2:+6798381 MS.gene68594:CDS
ACAAGCATTGCAGAGCGTTT+TGG 0.323869 2.2:-6798587 None:intergenic
AGAACTGCTGGACCAATATA+TGG 0.343881 2.2:+6798166 MS.gene68594:CDS
TACTTCGGGCACGCTTTACT+GGG 0.367389 2.2:-6798318 None:intergenic
AGGACGACGGCGTTTACTTC+GGG 0.370626 2.2:-6798332 None:intergenic
AACCAAGATCCCTTCATATT+CGG 0.371276 2.2:-6794520 None:intergenic
AGAGAAGCCTTCCCTGAGTT+GGG 0.379797 2.2:-6794728 None:intergenic
TAGTCATCAAAGACGGTGTT+AGG 0.392164 2.2:+6798725 MS.gene68594:CDS
TTCCGAATATGAAGGGATCT+TGG 0.400481 2.2:+6794518 MS.gene68594:CDS
GAAGAAGATTGGAGTGCTCT+TGG 0.409178 2.2:+6794637 MS.gene68594:CDS
CAAATACTGCTGAAGAAGAT+TGG 0.423472 2.2:+6794626 MS.gene68594:CDS
CAGAAAGGGGCATTCTGCTT+GGG 0.428024 2.2:-6798199 None:intergenic
AAAGAAGCGGCAAGAACTGC+TGG 0.447119 2.2:+6798154 MS.gene68594:CDS
ACAGAAAGGGGCATTCTGCT+TGG 0.464517 2.2:-6798200 None:intergenic
ACAAAAGTGGGGCTGTTCGC+CGG 0.466878 2.2:-6798652 None:intergenic
AATACAGGATTTAAGCTTGA+AGG 0.479268 2.2:-6798352 None:intergenic
ATGAAAGAAATCGAGAATAC+AGG 0.480881 2.2:-6798367 None:intergenic
CAGAGAAGCCTTCCCTGAGT+TGG 0.483014 2.2:-6794729 None:intergenic
ATGCTTGTGGTGTTCGGTAC+AGG 0.486984 2.2:+6798602 MS.gene68594:CDS
AAACAGTCACAAGAAGGTTC+TGG 0.490245 2.2:+6798690 MS.gene68594:CDS
ACATTTGATGAAGCCAACTT+AGG 0.491700 2.2:-6798754 None:intergenic
AAGGACGACGGCGTTTACTT+CGG 0.496252 2.2:-6798333 None:intergenic
TCTGCAATGCTTGTGGTGTT+CGG 0.497409 2.2:+6798596 MS.gene68594:CDS
TGTGGTGTTCGGTACAGGTC+TGG 0.506214 2.2:+6798607 MS.gene68594:CDS
TGCACAGATGCTACAAAAGT+GGG 0.515410 2.2:-6798664 None:intergenic
ACAGGATATTCCGAATATGA+AGG 0.520393 2.2:+6794510 None:intergenic
AAAATGAGAATCCCCAACTC+AGG 0.526198 2.2:+6794716 MS.gene68594:CDS
GCACGCTTTACTGGGATGAC+AGG 0.530384 2.2:-6798310 None:intergenic
AAGTGGGGCTGTTCGCCGGC+CGG 0.532753 2.2:-6798648 None:intergenic
TGTTAGGATCCGTCCTAAGT+TGG 0.534235 2.2:+6798741 MS.gene68594:CDS
CCGGCCGGTATTCAGGATAG+AGG 0.538514 2.2:-6798633 None:intergenic
TTCCCCAATAATAAAAGAAG+CGG 0.551958 2.2:+6798141 MS.gene68594:CDS
GTGCACAGATGCTACAAAAG+TGG 0.558433 2.2:-6798665 None:intergenic
TTGGGTCCCTCTCTCCATTG+TGG 0.572384 2.2:-6798559 None:intergenic
TTGATGAAGCCAACTTAGGA+CGG 0.591529 2.2:-6798750 None:intergenic
GAGAAGCCTTCCCTGAGTTG+GGG 0.592330 2.2:-6794727 None:intergenic
GTCGCCTCTATCCTGAATAC+CGG 0.595004 2.2:+6798629 MS.gene68594:CDS
AAAACGCTCTGCAATGCTTG+TGG 0.598857 2.2:+6798589 MS.gene68594:CDS
GAGATCATCGAAAGTCTCAT+CGG 0.601725 2.2:-6794569 None:intergenic
AGTTGTGCTTCAATACAGCC+CGG 0.602280 2.2:+6798231 MS.gene68594:CDS
CAGGATATTCCGAATATGAA+GGG 0.603930 2.2:+6794511 None:intergenic
AAATGAGAATCCCCAACTCA+GGG 0.606365 2.2:+6794717 MS.gene68594:CDS
GAGAATCCCCAACTCAGGGA+AGG 0.608808 2.2:+6794721 MS.gene68594:CDS
GAGAAAGTGCACACATTGTG+AGG 0.609475 2.2:+6798525 MS.gene68594:CDS
TTTGCGTCCACATCTTCCAA+TGG 0.611208 2.2:-6794607 None:intergenic
GAGACTCCACAATGGAGAGA+GGG 0.617903 2.2:+6798553 MS.gene68594:CDS
AGAGACTCCACAATGGAGAG+AGG 0.626282 2.2:+6798552 MS.gene68594:CDS
GCACTCAAACAGTCACAAGA+AGG 0.630356 2.2:+6798684 MS.gene68594:CDS
GTGTCGCCAGCAGTATTCTG+TGG 0.636643 2.2:+6794685 MS.gene68594:CDS
GACAACTGACTCTTGTGATG+AGG 0.655145 2.2:-6798500 None:intergenic
CCTCTATCCTGAATACCGGC+CGG 0.661479 2.2:+6798633 MS.gene68594:CDS
AAAGCCAGAATTCTCAACTG+AGG 0.662049 2.2:-6798281 None:intergenic
GATTTAAGCTTGAAGGACGA+CGG 0.671757 2.2:-6798345 None:intergenic
AAGAAGGTTCTGGAGATGCG+AGG 0.680850 2.2:+6798700 MS.gene68594:CDS
CGAGGCGTAGTCATCAAAGA+CGG 0.686995 2.2:+6798718 MS.gene68594:CDS
CAATGGAGAGAGGGACCCAA+CGG 0.691262 2.2:+6798562 MS.gene68594:CDS
GCACAGATGCTACAAAAGTG+GGG 0.711092 2.2:-6798663 None:intergenic
AGGTCACAGAGACTCCACAA+TGG 0.715521 2.2:+6798545 MS.gene68594:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGGAAATATAAAAAT+CGG - chr2.2:6798081-6798100 None:intergenic 10.0%
!! ATAGTATTAAAATAAAAACT+GGG + chr2.2:6796604-6796623 MS.gene68594:intron 10.0%
!!! ATTTTTAATTTAATCAAAAC+AGG - chr2.2:6796410-6796429 None:intergenic 10.0%
!!! CATATTTTATTAAATTAAAC+AGG - chr2.2:6796344-6796363 None:intergenic 10.0%
!!! TTATTTTAATACTATCAATA+AGG - chr2.2:6796599-6796618 None:intergenic 10.0%
!! AAACAGTAAAATAAAGATAT+AGG + chr2.2:6797099-6797118 MS.gene68594:intron 15.0%
!! ATATATAAGATAAAATCCAA+AGG + chr2.2:6795438-6795457 MS.gene68594:intron 15.0%
!! CAAAACAACTAATAAAAATA+TGG + chr2.2:6796293-6796312 MS.gene68594:intron 15.0%
!! GATAGTATTAAAATAAAAAC+TGG + chr2.2:6796603-6796622 MS.gene68594:intron 15.0%
!! TAGTATTAAAATAAAAACTG+GGG + chr2.2:6796605-6796624 MS.gene68594:intron 15.0%
!! TTTGAATTAATAATTGAAAG+AGG - chr2.2:6798008-6798027 None:intergenic 15.0%
!!! TTTTTTGACAAGAATTTTAA+TGG + chr2.2:6794541-6794560 MS.gene68594:CDS 15.0%
!! AACTATATATAAACAATGCT+TGG + chr2.2:6797467-6797486 MS.gene68594:intron 20.0%
!! AATAATTGAAAGAGGAAATT+GGG - chr2.2:6798000-6798019 None:intergenic 20.0%
!! AGTAAAGAAACAGAAAAAAA+GGG + chr2.2:6798447-6798466 MS.gene68594:CDS 20.0%
!! ATGGATAGTTATCAATTATA+AGG - chr2.2:6798047-6798066 None:intergenic 20.0%
!! GTAAAATAAAGATATAGGTT+AGG + chr2.2:6797104-6797123 MS.gene68594:intron 20.0%
!! GTCAAATCATCAAAATAATA+AGG - chr2.2:6797914-6797933 None:intergenic 20.0%
!! TAATAATTGAAAGAGGAAAT+TGG - chr2.2:6798001-6798020 None:intergenic 20.0%
!! TATCATCAAAACAACAAAAA+AGG - chr2.2:6798096-6798115 None:intergenic 20.0%
!! TCATTTATTACAAAGTAGTT+TGG - chr2.2:6795214-6795233 None:intergenic 20.0%
!! TTATATGTTTCGAAACAAAT+CGG + chr2.2:6796199-6796218 MS.gene68594:intron 20.0%
!!! ACATTTAAGTTCATGTTATA+AGG - chr2.2:6797302-6797321 None:intergenic 20.0%
!!! GTGTGTTTAATTTTGTTAAA+GGG + chr2.2:6797214-6797233 MS.gene68594:intron 20.0%
!!! TACTCATAACTTGTATTTTT+TGG + chr2.2:6797410-6797429 MS.gene68594:intron 20.0%
!!! TGGAGTTTATTTGTTTATTT+TGG + chr2.2:6796565-6796584 MS.gene68594:intron 20.0%
!!! TGTGTGTTTAATTTTGTTAA+AGG + chr2.2:6797213-6797232 MS.gene68594:intron 20.0%
!!! TGTGTTTAATTTTGTTAAAG+GGG + chr2.2:6797215-6797234 MS.gene68594:intron 20.0%
! AATGAAACAGAAAATGATGA+CGG + chr2.2:6797774-6797793 MS.gene68594:intron 25.0%
! AATTACCAATCATCATTGTT+CGG + chr2.2:6797169-6797188 MS.gene68594:intron 25.0%
! ACTAATAAAAATATGGTGAG+CGG + chr2.2:6796300-6796319 MS.gene68594:intron 25.0%
! ACTGAAAAAACATCAAAACA+CGG - chr2.2:6794667-6794686 None:intergenic 25.0%
! AGATAACAAACATCAAAGTA+TGG - chr2.2:6794796-6794815 None:intergenic 25.0%
! AGTTATCAATTATAAGGCTA+TGG - chr2.2:6798041-6798060 None:intergenic 25.0%
! ATACTATCAATAAGGATCTA+CGG - chr2.2:6796591-6796610 None:intergenic 25.0%
! CAATACGATTTACTCATTAT+CGG + chr2.2:6796774-6796793 MS.gene68594:intron 25.0%
! GAGTAAAGAAACAGAAAAAA+AGG + chr2.2:6798446-6798465 MS.gene68594:CDS 25.0%
! TAAAATGAACAACAATACCA+TGG + chr2.2:6797244-6797263 MS.gene68594:intron 25.0%
! TCTACAAATAAATGATCGTA+AGG - chr2.2:6796031-6796050 None:intergenic 25.0%
! TGTTTCCCTCAAAAAAAAAA+AGG - chr2.2:6797270-6797289 None:intergenic 25.0%
! TTTAACGTTGTTACATTCAA+AGG - chr2.2:6795848-6795867 None:intergenic 25.0%
!! ACAACTAGAATATTTTACGT+AGG + chr2.2:6795085-6795104 MS.gene68594:intron 25.0%
!! ACGTATCTTTTGGTATAAAT+CGG - chr2.2:6795942-6795961 None:intergenic 25.0%
!! ATCTTCATATACGTATCTTT+TGG - chr2.2:6795952-6795971 None:intergenic 25.0%
!! CTCTGAAAAATTTCAACTTT+AGG - chr2.2:6796934-6796953 None:intergenic 25.0%
!! GGAATAGTTTTTCCATATAT+TGG - chr2.2:6798181-6798200 None:intergenic 25.0%
!! TTGCAAATGTTTGGTTATTT+TGG + chr2.2:6797493-6797512 MS.gene68594:intron 25.0%
!!! AACTTTTTTTTCACAGAAAG+GGG - chr2.2:6798215-6798234 None:intergenic 25.0%
!!! ACAACTTTTTTTTCACAGAA+AGG - chr2.2:6798217-6798236 None:intergenic 25.0%
!!! CAACTTTTTTTTCACAGAAA+GGG - chr2.2:6798216-6798235 None:intergenic 25.0%
!!! CTAAAGTTGAAATTTTTCAG+AGG + chr2.2:6796932-6796951 MS.gene68594:intron 25.0%
!!! GCTAAATTTAAGTTGTGTAA+TGG + chr2.2:6797141-6797160 MS.gene68594:intron 25.0%
!!! GTGTTTAATTTTGTTAAAGG+GGG + chr2.2:6797216-6797235 MS.gene68594:intron 25.0%
!!! TTGTTGTTTTGATGATAACT+TGG + chr2.2:6798099-6798118 MS.gene68594:intron 25.0%
AAAATAAAAACTGGGGCAAA+AGG + chr2.2:6796612-6796631 MS.gene68594:intron 30.0%
AAAGAGATCGAGAAAAAGTT+AGG - chr2.2:6796061-6796080 None:intergenic 30.0%
AAAGCTCAAAGTTGTAGTAA+TGG + chr2.2:6795646-6795665 MS.gene68594:intron 30.0%
AAAGTAAACTAGAGTAGTGT+CGG + chr2.2:6795151-6795170 MS.gene68594:intron 30.0%
AAGTTCATGTTATAAGGCTA+TGG - chr2.2:6797296-6797315 None:intergenic 30.0%
AAGTTTAGTTGCATACTCAA+TGG + chr2.2:6795332-6795351 MS.gene68594:intron 30.0%
AATACAGGATTTAAGCTTGA+AGG - chr2.2:6798355-6798374 None:intergenic 30.0%
ATGAAAGAAATCGAGAATAC+AGG - chr2.2:6798370-6798389 None:intergenic 30.0%
ATGTTAACATTTCCTCCTAA+AGG - chr2.2:6795055-6795074 None:intergenic 30.0%
CAGTCAAATCAAATCCAAAA+TGG + chr2.2:6796247-6796266 MS.gene68594:intron 30.0%
CGATAATGAGTAAATCGTAT+TGG - chr2.2:6796776-6796795 None:intergenic 30.0%
CTTGGATCTCATTACAATTT+CGG - chr2.2:6797864-6797883 None:intergenic 30.0%
GATAGTATTTGGTAAATGGT+GGG + chr2.2:6797606-6797625 MS.gene68594:intron 30.0%
GTGTGATAGTATTTGGTAAA+TGG + chr2.2:6797602-6797621 MS.gene68594:intron 30.0%
GTTAATAGCAGATGAAACAA+GGG - chr2.2:6796854-6796873 None:intergenic 30.0%
TAATGAGTAAATCGTATTGG+CGG - chr2.2:6796773-6796792 None:intergenic 30.0%
TCAGAAAGTAAGAAAGTTTC+TGG + chr2.2:6797443-6797462 MS.gene68594:intron 30.0%
TGATAGTATTTGGTAAATGG+TGG + chr2.2:6797605-6797624 MS.gene68594:intron 30.0%
TGATTATCAATTGAGAACAG+CGG + chr2.2:6796489-6796508 MS.gene68594:intron 30.0%
TGTCGCTACTTATGATAATA+TGG + chr2.2:6794767-6794786 MS.gene68594:intron 30.0%
TTAATAAATTGTCCCCACTT+AGG - chr2.2:6795382-6795401 None:intergenic 30.0%
TTCCCCAATAATAAAAGAAG+CGG + chr2.2:6798141-6798160 MS.gene68594:CDS 30.0%
TTCTTAAGAGACAATAGTTC+AGG + chr2.2:6797818-6797837 MS.gene68594:intron 30.0%
! AAATTTGTTTCCTTAAGCAG+TGG + chr2.2:6797558-6797577 MS.gene68594:intron 30.0%
! TTTCAACTTTAGGAGCATAA+AGG - chr2.2:6796924-6796943 None:intergenic 30.0%
!! CAAGTTTTTCGATTTTCCAT+TGG + chr2.2:6794591-6794610 MS.gene68594:CDS 30.0%
!! TTGCCGCTTCTTTTATTATT+GGG - chr2.2:6798147-6798166 None:intergenic 30.0%
!! TTTTATTAGTTGTTTTGCGC+TGG - chr2.2:6796290-6796309 None:intergenic 30.0%
!!! CATGGCCTTTTTTTTTTTGA+GGG + chr2.2:6797262-6797281 MS.gene68594:intron 30.0%
AACAACGTTAAAACCCCTTA+GGG + chr2.2:6795856-6795875 MS.gene68594:intron 35.0%
AACAGAAATTGCTTTGTGCA+AGG - chr2.2:6797654-6797673 None:intergenic 35.0%
AACCAAGATCCCTTCATATT+CGG - chr2.2:6794523-6794542 None:intergenic 35.0%
AAGTTTCAGCAAAATCGAAC+GGG - chr2.2:6797011-6797030 None:intergenic 35.0%
AATCCTAGTATTACCTCATC+TGG + chr2.2:6795531-6795550 MS.gene68594:intron 35.0%
ACAGAAATTGCTTTGTGCAA+GGG - chr2.2:6797653-6797672 None:intergenic 35.0%
ACATTTGATGAAGCCAACTT+AGG - chr2.2:6798757-6798776 None:intergenic 35.0%
AGGGTCCAGTTATTTAATAC+TGG - chr2.2:6797634-6797653 None:intergenic 35.0%
ATCAATTATCAGATGCTGTC+AGG - chr2.2:6797936-6797955 None:intergenic 35.0%
ATCCTAGTATTACCTCATCT+GGG + chr2.2:6795532-6795551 MS.gene68594:intron 35.0%
CAAATACTGCTGAAGAAGAT+TGG + chr2.2:6794626-6794645 MS.gene68594:CDS 35.0%
CCTCAAAAAAAAAAAGGCCA+TGG - chr2.2:6797264-6797283 None:intergenic 35.0%
CGAAACATATAATCACACAG+AGG - chr2.2:6796191-6796210 None:intergenic 35.0%
CGTGACATGTAGATTGAATT+TGG + chr2.2:6795234-6795253 MS.gene68594:intron 35.0%
CTCAAAGTTGTAGTAATCTC+AGG + chr2.2:6795650-6795669 MS.gene68594:intron 35.0%
CTCGAGACTACAAATTTACA+TGG - chr2.2:6797373-6797392 None:intergenic 35.0%
GAAGTTTCAGCAAAATCGAA+CGG - chr2.2:6797012-6797031 None:intergenic 35.0%
GAGATAATAACGAGAGAGAA+TGG - chr2.2:6796087-6796106 None:intergenic 35.0%
GCAGAATTTGAGTGAAAAAG+TGG + chr2.2:6795266-6795285 MS.gene68594:intron 35.0%
GGGATCCAGTATTAAATAAC+TGG + chr2.2:6797626-6797645 MS.gene68594:intron 35.0%
GGTTAATAGCAGATGAAACA+AGG - chr2.2:6796855-6796874 None:intergenic 35.0%
GTGTCTTGTGTGATAGTATT+TGG + chr2.2:6797595-6797614 MS.gene68594:intron 35.0%
TAACAACGTTAAAACCCCTT+AGG + chr2.2:6795855-6795874 MS.gene68594:intron 35.0%
TCAAAGTTGTAGTAATGGCT+GGG + chr2.2:6795713-6795732 MS.gene68594:intron 35.0%
TGTGAGTGACTTAGTGTATT+TGG + chr2.2:6797887-6797906 MS.gene68594:intron 35.0%
TGTTTCCATAGGAAAAGTTC+AGG + chr2.2:6795588-6795607 MS.gene68594:intron 35.0%
TTCAGAGGTTTCACAACAAA+GGG + chr2.2:6796947-6796966 MS.gene68594:intron 35.0%
TTTAGTTGCATACTCAATGG+CGG + chr2.2:6795335-6795354 MS.gene68594:intron 35.0%
TTTCAGAGGTTTCACAACAA+AGG + chr2.2:6796946-6796965 MS.gene68594:intron 35.0%
! AATTGGGTGATATGCTACTT+TGG - chr2.2:6797984-6798003 None:intergenic 35.0%
! AGCTTTTCCTGCAGATTTTT+GGG - chr2.2:6795632-6795651 None:intergenic 35.0%
! AGTTTCCTGAACTTTTCCTA+TGG - chr2.2:6795596-6795615 None:intergenic 35.0%
! ATTTTACCACAGAATACTGC+TGG - chr2.2:6794694-6794713 None:intergenic 35.0%
! ATTTTCCATCATCAGCCTAA+AGG + chr2.2:6796110-6796129 MS.gene68594:intron 35.0%
! TGTTTGCTAGAGATTCAGTT+AGG + chr2.2:6795295-6795314 MS.gene68594:intron 35.0%
! TTCTTTCATTGCTAGCTTAC+AGG + chr2.2:6798381-6798400 MS.gene68594:CDS 35.0%
! TTTGAGATGATCTATGCTGA+AGG + chr2.2:6794997-6795016 MS.gene68594:intron 35.0%
! TTTTGCTGAACTTTGAACTC+AGG + chr2.2:6795029-6795048 MS.gene68594:intron 35.0%
!! ATGAGTACGAAAGTGTTGTT+AGG - chr2.2:6797397-6797416 None:intergenic 35.0%
!! CTTGCCGCTTCTTTTATTAT+TGG - chr2.2:6798148-6798167 None:intergenic 35.0%
!! TGCCGCTTCTTTTATTATTG+GGG - chr2.2:6798146-6798165 None:intergenic 35.0%
!! TTAGGCTGATGATGGAAAAT+GGG - chr2.2:6796110-6796129 None:intergenic 35.0%
!! TTTAGGCTGATGATGGAAAA+TGG - chr2.2:6796111-6796130 None:intergenic 35.0%
!!! CCATGGCCTTTTTTTTTTTG+AGG + chr2.2:6797261-6797280 MS.gene68594:intron 35.0%
AAAAGTTCAGGAAACTCTGC+AGG + chr2.2:6795600-6795619 MS.gene68594:intron 40.0%
AAAATCGGATGCAGCATCAA+TGG - chr2.2:6798066-6798085 None:intergenic 40.0%
AAAATGAGAATCCCCAACTC+AGG + chr2.2:6794716-6794735 MS.gene68594:CDS 40.0%
AAACAGTCACAAGAAGGTTC+TGG + chr2.2:6798690-6798709 MS.gene68594:CDS 40.0%
AAAGCCAGAATTCTCAACTG+AGG - chr2.2:6798284-6798303 None:intergenic 40.0%
AAAGTGGCTGAAACTAGACT+TGG + chr2.2:6797714-6797733 MS.gene68594:intron 40.0%
AAATCCTTGGCAAAATCTGC+AGG + chr2.2:6795560-6795579 MS.gene68594:intron 40.0%
AAATGAGAATCCCCAACTCA+GGG + chr2.2:6794717-6794736 MS.gene68594:CDS 40.0%
AACAAAGGGAAGAGGAAAGT+AGG + chr2.2:6796961-6796980 MS.gene68594:intron 40.0%
AACCTCAAAGTTGAGTGTAG+AGG + chr2.2:6795912-6795931 MS.gene68594:intron 40.0%
AACTTTGAACTCAGGCCTTT+AGG + chr2.2:6795037-6795056 MS.gene68594:intron 40.0%
AAGTGGCTGAAACTAGACTT+GGG + chr2.2:6797715-6797734 MS.gene68594:intron 40.0%
AATCAGATGATCTCCCTAAG+GGG - chr2.2:6795872-6795891 None:intergenic 40.0%
ACAGAAAAAAAGGGAGCTCT+CGG + chr2.2:6798456-6798475 MS.gene68594:CDS 40.0%
ACTAAGTCACTCACAGAACT+TGG - chr2.2:6797882-6797901 None:intergenic 40.0%
AGAACTGCTGGACCAATATA+TGG + chr2.2:6798166-6798185 MS.gene68594:CDS 40.0%
AGACAACAGGGAATAGAAGA+TGG + chr2.2:6796527-6796546 MS.gene68594:intron 40.0%
AGCACTGCGTTGAAGTATAA+TGG - chr2.2:6794886-6794905 None:intergenic 40.0%
AGGTTAGGAAATGAGTCATC+TGG + chr2.2:6797119-6797138 MS.gene68594:intron 40.0%
AGTTTCAGCAAAATCGAACG+GGG - chr2.2:6797010-6797029 None:intergenic 40.0%
ATCCTCTACACTCAACTTTG+AGG - chr2.2:6795917-6795936 None:intergenic 40.0%
ATCTAATCGTCCACTGCTTA+AGG - chr2.2:6797571-6797590 None:intergenic 40.0%
ATGGGATTTGTGAAGACAAC+AGG + chr2.2:6796514-6796533 MS.gene68594:intron 40.0%
CAAAAGGTTAAGAAGTGGGT+GGG + chr2.2:6796628-6796647 MS.gene68594:intron 40.0%
CAATTGAGAACAGCGGTAAT+GGG + chr2.2:6796496-6796515 MS.gene68594:intron 40.0%
CAGCATCTCGAGGATAATTT+AGG - chr2.2:6796876-6796895 None:intergenic 40.0%
CATTTGTGGATGGCATTAGA+AGG + chr2.2:6797045-6797064 MS.gene68594:intron 40.0%
CTCAAAGTTGTAGTAATGGC+TGG + chr2.2:6795712-6795731 MS.gene68594:intron 40.0%
CTGCCTTCAAAAACAGAAAC+CGG - chr2.2:6798253-6798272 None:intergenic 40.0%
CTTCTCTCTGTGTACATTTG+TGG + chr2.2:6797031-6797050 MS.gene68594:intron 40.0%
GAATCAGATGATCTCCCTAA+GGG - chr2.2:6795873-6795892 None:intergenic 40.0%
GAATTAGCCCAAAAATCTGC+AGG + chr2.2:6795622-6795641 MS.gene68594:intron 40.0%
GAGAACCGAACAATGATGAT+TGG - chr2.2:6797177-6797196 None:intergenic 40.0%
GAGATCATCGAAAGTCTCAT+CGG - chr2.2:6794572-6794591 None:intergenic 40.0%
GATTTAAGCTTGAAGGACGA+CGG - chr2.2:6798348-6798367 None:intergenic 40.0%
GCACTGCGTTGAAGTATAAT+GGG - chr2.2:6794885-6794904 None:intergenic 40.0%
GCTAGAGATTCAGTTAGGAA+GGG + chr2.2:6795300-6795319 MS.gene68594:intron 40.0%
GCTTGGAGTTTGCAAATGTT+TGG + chr2.2:6797484-6797503 MS.gene68594:intron 40.0%
GTAATCTCAGGAAAATCTGC+AGG + chr2.2:6795662-6795681 MS.gene68594:intron 40.0%
TACTCATTATCGGCAGTAAC+AGG + chr2.2:6796784-6796803 MS.gene68594:intron 40.0%
TAGTCATCAAAGACGGTGTT+AGG + chr2.2:6798725-6798744 MS.gene68594:CDS 40.0%
TCAATTGAGAACAGCGGTAA+TGG + chr2.2:6796495-6796514 MS.gene68594:intron 40.0%
TCTCTGTGTACATTTGTGGA+TGG + chr2.2:6797035-6797054 MS.gene68594:intron 40.0%
TGCACAGATGCTACAAAAGT+GGG - chr2.2:6798667-6798686 None:intergenic 40.0%
TGCAGGAAATGTGTTTCCAT+AGG + chr2.2:6795577-6795596 MS.gene68594:intron 40.0%
TGCCTTCAAAAACAGAAACC+GGG - chr2.2:6798252-6798271 None:intergenic 40.0%
TGCTAGAGATTCAGTTAGGA+AGG + chr2.2:6795299-6795318 MS.gene68594:intron 40.0%
TGGGATTTGTGAAGACAACA+GGG + chr2.2:6796515-6796534 MS.gene68594:intron 40.0%
TGTGATGCGAGATATACGTT+GGG + chr2.2:6796430-6796449 MS.gene68594:intron 40.0%
TTCAGCTTAACCAGGATTCT+CGG + chr2.2:6795809-6795828 MS.gene68594:intron 40.0%
TTCCCAGATGAGGTAATACT+AGG - chr2.2:6795537-6795556 None:intergenic 40.0%
TTCCGAATATGAAGGGATCT+TGG + chr2.2:6794518-6794537 MS.gene68594:CDS 40.0%
TTGATGAAGCCAACTTAGGA+CGG - chr2.2:6798753-6798772 None:intergenic 40.0%
TTGATGAAGCCTCTTGAGTT+TGG + chr2.2:6797690-6797709 MS.gene68594:intron 40.0%
TTGTGATGCGAGATATACGT+TGG + chr2.2:6796429-6796448 MS.gene68594:intron 40.0%
TTTAGCAAGTCACTGTGCAA+AGG - chr2.2:6795134-6795153 None:intergenic 40.0%
! ACAACTTTGAGCTTTTCCTG+CGG - chr2.2:6795641-6795660 None:intergenic 40.0%
! AGCTTTTCCTGCGGATTTTT+GGG - chr2.2:6795694-6795713 None:intergenic 40.0%
! ATTTCCTGCAGATTTTGCCA+AGG - chr2.2:6795567-6795586 None:intergenic 40.0%
! CGATTTTCCATTGGAAGATG+TGG + chr2.2:6794600-6794619 MS.gene68594:CDS 40.0%
! GAGCTTTTCCTGCAGATTTT+TGG - chr2.2:6795633-6795652 None:intergenic 40.0%
! GATGGTTTTCGTCTAGAAGT+TGG + chr2.2:6796545-6796564 MS.gene68594:intron 40.0%
! GCAGATTTTGCCAAGGATTT+AGG - chr2.2:6795560-6795579 None:intergenic 40.0%
! GTAATACTAGGATTTTGCCC+AGG - chr2.2:6795525-6795544 None:intergenic 40.0%
! TTGCGTCATGAAGACCATTT+TGG - chr2.2:6796264-6796283 None:intergenic 40.0%
!! TAGGCTGATGATGGAAAATG+GGG - chr2.2:6796109-6796128 None:intergenic 40.0%
AAAACGCTCTGCAATGCTTG+TGG + chr2.2:6798589-6798608 MS.gene68594:CDS 45.0%
AATCCTGGTTAAGCTGAAGC+AGG - chr2.2:6795807-6795826 None:intergenic 45.0%
AGAATAACAGCAGCATCTCG+AGG - chr2.2:6796886-6796905 None:intergenic 45.0%
AGAATCAAACCCGAGAATCC+TGG - chr2.2:6795822-6795841 None:intergenic 45.0%
AGTAGCGACAGAATACTCAC+AGG - chr2.2:6794757-6794776 None:intergenic 45.0%
AGTTGTGCTTCAATACAGCC+CGG + chr2.2:6798231-6798250 MS.gene68594:CDS 45.0%
ATCCTGGTTAAGCTGAAGCA+GGG - chr2.2:6795806-6795825 None:intergenic 45.0%
CAGAAAAAAAGGGAGCTCTC+GGG + chr2.2:6798457-6798476 MS.gene68594:CDS 45.0%
CATCTGGGAACCTAAATCCT+TGG + chr2.2:6795547-6795566 MS.gene68594:intron 45.0%
CCATCTCTTCTAAGCACCTT+TGG - chr2.2:6795457-6795476 None:intergenic 45.0%
GAATTAGCCCAAAAATCCGC+AGG + chr2.2:6795684-6795703 MS.gene68594:intron 45.0%
GCAAAAGGTTAAGAAGTGGG+TGG + chr2.2:6796627-6796646 MS.gene68594:intron 45.0%
GCACAGATGCTACAAAAGTG+GGG - chr2.2:6798666-6798685 None:intergenic 45.0%
GCACTCAAACAGTCACAAGA+AGG + chr2.2:6798684-6798703 MS.gene68594:CDS 45.0%
GCCTCTTGAGTTTGGTAAAG+TGG + chr2.2:6797698-6797717 MS.gene68594:intron 45.0%
GCTTCCTCAGTTGAGAATTC+TGG + chr2.2:6798277-6798296 MS.gene68594:CDS 45.0%
GGAATCAGATGATCTCCCTA+AGG - chr2.2:6795874-6795893 None:intergenic 45.0%
GGGGCAAAAGGTTAAGAAGT+GGG + chr2.2:6796624-6796643 MS.gene68594:intron 45.0%
GGTTTCACAACAAAGGGAAG+AGG + chr2.2:6796953-6796972 MS.gene68594:intron 45.0%
GTGCACAGATGCTACAAAAG+TGG - chr2.2:6798668-6798687 None:intergenic 45.0%
TATGAGTTGCTTCAGCTCAG+TGG + chr2.2:6795477-6795496 MS.gene68594:intron 45.0%
TCAGCTTAACCAGGATTCTC+GGG + chr2.2:6795810-6795829 MS.gene68594:intron 45.0%
TCTGCAATGCTTGTGGTGTT+CGG + chr2.2:6798596-6798615 MS.gene68594:CDS 45.0%
TGCTGAGCTTATTCTGTGAG+TGG + chr2.2:6796725-6796744 MS.gene68594:intron 45.0%
TGGATGGCATTAGAAGGCTT+TGG + chr2.2:6797051-6797070 MS.gene68594:intron 45.0%
TGGGGCAAAAGGTTAAGAAG+TGG + chr2.2:6796623-6796642 MS.gene68594:intron 45.0%
TGTTAGGATCCGTCCTAAGT+TGG + chr2.2:6798741-6798760 MS.gene68594:CDS 45.0%
TTTGAACTCAGGCCTTTAGG+AGG + chr2.2:6795040-6795059 MS.gene68594:intron 45.0%
TTTGCGTCCACATCTTCCAA+TGG - chr2.2:6794610-6794629 None:intergenic 45.0%
! AGGATTTAGGTTCCCAGATG+AGG - chr2.2:6795547-6795566 None:intergenic 45.0%
! ATTAAGCAGAGCATCAGAGC+CGG - chr2.2:6796699-6796718 None:intergenic 45.0%
! GAAGAAGATTGGAGTGCTCT+TGG + chr2.2:6794637-6794656 MS.gene68594:CDS 45.0%
! GAGAAAGTGCACACATTGTG+AGG + chr2.2:6798525-6798544 MS.gene68594:CDS 45.0%
! GAGCTTTTCCTGCGGATTTT+TGG - chr2.2:6795695-6795714 None:intergenic 45.0%
! GCCACTTTACCAAACTCAAG+AGG - chr2.2:6797702-6797721 None:intergenic 45.0%
!! AAACTAGAGTAGTGTCGGCT+AGG + chr2.2:6795156-6795175 MS.gene68594:intron 45.0%
!! ACAAGCATTGCAGAGCGTTT+TGG - chr2.2:6798590-6798609 None:intergenic 45.0%
!! CAAGCATTGCAGAGCGTTTT+GGG - chr2.2:6798589-6798608 None:intergenic 45.0%
!! CCAAAGGTGCTTAGAAGAGA+TGG + chr2.2:6795454-6795473 MS.gene68594:intron 45.0%
!!! AGCCCGGTTTCTGTTTTTGA+AGG + chr2.2:6798247-6798266 MS.gene68594:CDS 45.0%
!!! CCAGGATTTTTCTAGAGCCT+GGG + chr2.2:6795505-6795524 MS.gene68594:intron 45.0%
AAAGAAGCGGCAAGAACTGC+TGG + chr2.2:6798154-6798173 MS.gene68594:CDS 50.0%
AAGGACGACGGCGTTTACTT+CGG - chr2.2:6798336-6798355 None:intergenic 50.0%
AAGGTTAAGAAGTGGGTGGG+TGG + chr2.2:6796631-6796650 MS.gene68594:intron 50.0%
AGAGAAGCCTTCCCTGAGTT+GGG - chr2.2:6794731-6794750 None:intergenic 50.0%
AGAGACTCCACAATGGAGAG+AGG + chr2.2:6798552-6798571 MS.gene68594:CDS 50.0%
AGGTCACAGAGACTCCACAA+TGG + chr2.2:6798545-6798564 MS.gene68594:CDS 50.0%
AGGTTAAGAAGTGGGTGGGT+GGG + chr2.2:6796632-6796651 MS.gene68594:intron 50.0%
AGTCATAGTCAGCGAGCTGA+TGG - chr2.2:6794971-6794990 None:intergenic 50.0%
AGTTGTAGTAATGGCTGGGC+TGG + chr2.2:6795717-6795736 MS.gene68594:intron 50.0%
ATGCGAGATATACGTTGGGC+TGG + chr2.2:6796434-6796453 MS.gene68594:intron 50.0%
ATGCTTGTGGTGTTCGGTAC+AGG + chr2.2:6798602-6798621 MS.gene68594:CDS 50.0%
CCCTCAGGCAAACATAGATC+CGG + chr2.2:6796677-6796696 MS.gene68594:intron 50.0%
CCCTGTGTGGAAAAACGGTA+GGG + chr2.2:6796140-6796159 MS.gene68594:intron 50.0%
CCGGATCTATGTTTGCCTGA+GGG - chr2.2:6796680-6796699 None:intergenic 50.0%
CGAGGCGTAGTCATCAAAGA+CGG + chr2.2:6798718-6798737 MS.gene68594:CDS 50.0%
CGGATCTATGTTTGCCTGAG+GGG - chr2.2:6796679-6796698 None:intergenic 50.0%
GAGACTCCACAATGGAGAGA+GGG + chr2.2:6798553-6798572 MS.gene68594:CDS 50.0%
GGATCTATGTTTGCCTGAGG+GGG - chr2.2:6796678-6796697 None:intergenic 50.0%
GTCGCCTCTATCCTGAATAC+CGG + chr2.2:6798629-6798648 MS.gene68594:CDS 50.0%
GTTAATCCCTCCAATCGCGT+GGG - chr2.2:6795895-6795914 None:intergenic 50.0%
TACTTCGGGCACGCTTTACT+GGG - chr2.2:6798321-6798340 None:intergenic 50.0%
TCATCTGATTCCCACGCGAT+TGG + chr2.2:6795882-6795901 MS.gene68594:intron 50.0%
TCCTGGTTAAGCTGAAGCAG+GGG - chr2.2:6795805-6795824 None:intergenic 50.0%
TTACTTCGGGCACGCTTTAC+TGG - chr2.2:6798322-6798341 None:intergenic 50.0%
TTCAGCAAAATCGAACGGGG+AGG - chr2.2:6797007-6797026 None:intergenic 50.0%
! GGCTGGCTACAAAGGAAAGT+TGG + chr2.2:6795734-6795753 MS.gene68594:intron 50.0%
!! AAGAAGGTTCTGGAGATGCG+AGG + chr2.2:6798700-6798719 MS.gene68594:CDS 50.0%
!! AATGGCGGATTCAAGACCCT+GGG + chr2.2:6795350-6795369 MS.gene68594:intron 50.0%
!! ACAGAAAGGGGCATTCTGCT+TGG - chr2.2:6798203-6798222 None:intergenic 50.0%
!! CAGAAAGGGGCATTCTGCTT+GGG - chr2.2:6798202-6798221 None:intergenic 50.0%
!! CCCAGGCTCTAGAAAAATCC+TGG - chr2.2:6795508-6795527 None:intergenic 50.0%
!! CCCTACCGTTTTTCCACACA+GGG - chr2.2:6796143-6796162 None:intergenic 50.0%
!! TCAGCGAGCTGATGGATTCA+TGG - chr2.2:6794963-6794982 None:intergenic 50.0%
!! TCCCTACCGTTTTTCCACAC+AGG - chr2.2:6796144-6796163 None:intergenic 50.0%
!!! GCCAGGATTTTTCTAGAGCC+TGG + chr2.2:6795504-6795523 MS.gene68594:intron 50.0%
ACAAAAGTGGGGCTGTTCGC+CGG - chr2.2:6798655-6798674 None:intergenic 55.0%
AGGAAAGTTGGAGCTGAGCC+TGG + chr2.2:6795746-6795765 MS.gene68594:intron 55.0%
AGGACGACGGCGTTTACTTC+GGG - chr2.2:6798335-6798354 None:intergenic 55.0%
CAATGGAGAGAGGGACCCAA+CGG + chr2.2:6798562-6798581 MS.gene68594:CDS 55.0%
CAGAGAAGCCTTCCCTGAGT+TGG - chr2.2:6794732-6794751 None:intergenic 55.0%
CCGTGCCCTGTGTGGAAAAA+CGG + chr2.2:6796135-6796154 MS.gene68594:intron 55.0%
CCTCTATCCTGAATACCGGC+CGG + chr2.2:6798633-6798652 MS.gene68594:CDS 55.0%
CTGATTCCCACGCGATTGGA+GGG + chr2.2:6795886-6795905 MS.gene68594:intron 55.0%
GAGAAGCCTTCCCTGAGTTG+GGG - chr2.2:6794730-6794749 None:intergenic 55.0%
GAGAATCCCCAACTCAGGGA+AGG + chr2.2:6794721-6794740 MS.gene68594:CDS 55.0%
GAGTTGCTTCAGCTCAGTGG+CGG + chr2.2:6795480-6795499 MS.gene68594:intron 55.0%
GCACGCTTTACTGGGATGAC+AGG - chr2.2:6798313-6798332 None:intergenic 55.0%
GCCCTGTGTGGAAAAACGGT+AGG + chr2.2:6796139-6796158 MS.gene68594:intron 55.0%
GCCGGATCTATGTTTGCCTG+AGG - chr2.2:6796681-6796700 None:intergenic 55.0%
GGAAAGTTGGAGCTGAGCCT+GGG + chr2.2:6795747-6795766 MS.gene68594:intron 55.0%
GGTTAAGAAGTGGGTGGGTG+GGG + chr2.2:6796633-6796652 MS.gene68594:intron 55.0%
GGTTAATCCCTCCAATCGCG+TGG - chr2.2:6795896-6795915 None:intergenic 55.0%
GTGAGTGGCAACACCAACTC+TGG + chr2.2:6796740-6796759 MS.gene68594:intron 55.0%
GTGTCGCCAGCAGTATTCTG+TGG + chr2.2:6794685-6794704 MS.gene68594:CDS 55.0%
GTTAAGAAGTGGGTGGGTGG+GGG + chr2.2:6796634-6796653 MS.gene68594:intron 55.0%
TCTGATTCCCACGCGATTGG+AGG + chr2.2:6795885-6795904 MS.gene68594:intron 55.0%
TGGTTAAGCTGAAGCAGGGG+CGG - chr2.2:6795802-6795821 None:intergenic 55.0%
TGTGGTGTTCGGTACAGGTC+TGG + chr2.2:6798607-6798626 MS.gene68594:CDS 55.0%
TTAAGAAGTGGGTGGGTGGG+GGG + chr2.2:6796635-6796654 MS.gene68594:intron 55.0%
TTGGGTCCCTCTCTCCATTG+TGG - chr2.2:6798562-6798581 None:intergenic 55.0%
!! AATGGCTGGGCTGGCTACAA+AGG + chr2.2:6795726-6795745 MS.gene68594:intron 55.0%
!! CAATGGCGGATTCAAGACCC+TGG + chr2.2:6795349-6795368 MS.gene68594:intron 55.0%
!! CCGTTTTTCCACACAGGGCA+CGG - chr2.2:6796138-6796157 None:intergenic 55.0%
!!! CAGAGCGTTTTGGGACCGTT+GGG - chr2.2:6798580-6798599 None:intergenic 55.0%
ACCCTGGGTAAGCGCCTAAG+TGG + chr2.2:6795365-6795384 MS.gene68594:intron 60.0%
CCCACTTAGGCGCTTACCCA+GGG - chr2.2:6795369-6795388 None:intergenic 60.0%
CCCTGGGTAAGCGCCTAAGT+GGG + chr2.2:6795366-6795385 MS.gene68594:intron 60.0%
CCGGCCGGTATTCAGGATAG+AGG - chr2.2:6798636-6798655 None:intergenic 60.0%
CCTGGGTAAGCGCCTAAGTG+GGG + chr2.2:6795367-6795386 MS.gene68594:intron 60.0%
CGGCGCCTTTAGGCTGATGA+TGG - chr2.2:6796118-6796137 None:intergenic 60.0%
GCCCCTGCTTCAGCTTAACC+AGG + chr2.2:6795801-6795820 MS.gene68594:intron 60.0%
TGGCGGCACACTTCCAGAGT+TGG - chr2.2:6796756-6796775 None:intergenic 60.0%
!!! GCAGAGCGTTTTGGGACCGT+TGG - chr2.2:6798581-6798600 None:intergenic 60.0%
ACACAGGGCACGGCGCCTTT+AGG - chr2.2:6796128-6796147 None:intergenic 65.0%
ACTAGCCCAGCCTAGCTGGG+GGG + chr2.2:6795771-6795790 MS.gene68594:intron 65.0%
CACTAGCCCAGCCTAGCTGG+GGG + chr2.2:6795770-6795789 MS.gene68594:intron 65.0%
CCCCACTTAGGCGCTTACCC+AGG - chr2.2:6795370-6795389 None:intergenic 65.0%
CTGTTCGCCGGCCGGTATTC+AGG - chr2.2:6798643-6798662 None:intergenic 65.0%
GCACTAGCCCAGCCTAGCTG+GGG + chr2.2:6795769-6795788 MS.gene68594:intron 65.0%
GGCACTAGCCCAGCCTAGCT+GGG + chr2.2:6795768-6795787 MS.gene68594:intron 65.0%
GGTTGGGGATGTACCCCCTC+AGG + chr2.2:6796662-6796681 MS.gene68594:intron 65.0%
! TTCAGCTCAGTGGCGGAGCC+AGG + chr2.2:6795487-6795506 MS.gene68594:intron 65.0%
!! TAAAGGCGCCGTGCCCTGTG+TGG + chr2.2:6796127-6796146 MS.gene68594:intron 65.0%
AAGTGGGGCTGTTCGCCGGC+CGG - chr2.2:6798651-6798670 None:intergenic 70.0%
AAGTGGGTGGGTGGGGGGTG+GGG + chr2.2:6796640-6796659 MS.gene68594:intron 70.0%
AGAAGTGGGTGGGTGGGGGG+TGG + chr2.2:6796638-6796657 MS.gene68594:intron 70.0%
AGCCACCCCCCAGCTAGGCT+GGG - chr2.2:6795779-6795798 None:intergenic 70.0%
GAAGTGGGTGGGTGGGGGGT+GGG + chr2.2:6796639-6796658 MS.gene68594:intron 70.0%
GGGCACTAGCCCAGCCTAGC+TGG + chr2.2:6795767-6795786 MS.gene68594:intron 70.0%
!! GCTAGGCTGGGCTAGTGCCC+AGG - chr2.2:6795767-6795786 None:intergenic 70.0%
AGCCCAGCCTAGCTGGGGGG+TGG + chr2.2:6795774-6795793 MS.gene68594:intron 75.0%
AGTGGGTGGGTGGGGGGTGG+GGG + chr2.2:6796641-6796660 MS.gene68594:intron 75.0%
GAGCCACCCCCCAGCTAGGC+TGG - chr2.2:6795780-6795799 None:intergenic 75.0%
GTGGGTGGGGGGTGGGGGTT+GGG + chr2.2:6796646-6796665 MS.gene68594:intron 75.0%
TGGGTGGGGGGTGGGGGTTG+GGG + chr2.2:6796647-6796666 MS.gene68594:intron 75.0%
! GGCGGAGCCACCCCCCAGCT+AGG - chr2.2:6795784-6795803 None:intergenic 80.0%
! GGTGGGTGGGGGGTGGGGGT+TGG + chr2.2:6796645-6796664 MS.gene68594:intron 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 6794514 6798783 6794514 ID=MS.gene68594
chr2.2 mRNA 6794514 6798783 6794514 ID=MS.gene68594.t1;Parent=MS.gene68594
chr2.2 exon 6794514 6794756 6794514 ID=MS.gene68594.t1.exon1;Parent=MS.gene68594.t1
chr2.2 CDS 6794514 6794756 6794514 ID=cds.MS.gene68594.t1;Parent=MS.gene68594.t1
chr2.2 exon 6798130 6798783 6798130 ID=MS.gene68594.t1.exon2;Parent=MS.gene68594.t1
chr2.2 CDS 6798130 6798783 6798130 ID=cds.MS.gene68594.t1;Parent=MS.gene68594.t1
Gene Sequence

>MS.gene68594

GATATTCCGAATATGAAGGGATCTTGGTTTTTTGACAAGAATTTTAATGGTTTGTCCGATGAGACTTTCGATGATCTCAAGTTTTTCGATTTTCCATTGGAAGATGTGGACGCAAATACTGCTGAAGAAGATTGGAGTGCTCTTGGAGAGCCGTGTTTTGATGTTTTTTCAGTGTCGCCAGCAGTATTCTGTGGTAAAATTAAAAATGAGAATCCCCAACTCAGGGAAGGCTTCTCTGTTCCTGTGAGTATTCTGTCGCTACTTATGATAATATGGACTCCATACTTTGATGTTTGTTATCTGCTTAACTTGTTTTCTGATGTATTACTTCTCTGCTAGTCGTTGTATACATGAAAAGTTGCGATTAGCCCATTATACTTCAACGCAGTGCTCTTATATTTGATAACTTGACTGCATACATTGTTTTATTATGTGAAGCTGAAACACCATGAATCCATCAGCTCGCTGACTATGACTGTTTTATTTGAGATGATCTATGCTGAAGGAATGAAAAGTTTTGCTGAACTTTGAACTCAGGCCTTTAGGAGGAAATGTTAACATTGTTACGTAGACAACTAGAATATTTTACGTAGGCAACTGAGTTTTTACAATTTAAACCTTTGCACAGTGACTTGCTAAAGTAAACTAGAGTAGTGTCGGCTAGGAAATTTGTCAGATTGACAGAAAAATATCAAAACCAAACTACTTTGTAATAAATGACGTGACATGTAGATTGAATTTGGTCTGACATAGCAGAATTTGAGTGAAAAAGTGGATGTCTTGTTTGCTAGAGATTCAGTTAGGAAGGGTTATTGAGCAAGTTTAGTTGCATACTCAATGGCGGATTCAAGACCCTGGGTAAGCGCCTAAGTGGGGACAATTTATTAATTAAAAATAATTATTAATAATAATAATTCTTCTCATATATATAAGATAAAATCCAAAGGTGCTTAGAAGAGATGGTATGAGTTGCTTCAGCTCAGTGGCGGAGCCAGGATTTTTCTAGAGCCTGGGCAAAATCCTAGTATTACCTCATCTGGGAACCTAAATCCTTGGCAAAATCTGCAGGAAATGTGTTTCCATAGGAAAAGTTCAGGAAACTCTGCAGGAATTAGCCCAAAAATCTGCAGGAAAAGCTCAAAGTTGTAGTAATCTCAGGAAAATCTGCAGGAATTAGCCCAAAAATCCGCAGGAAAAGCTCAAAGTTGTAGTAATGGCTGGGCTGGCTACAAAGGAAAGTTGGAGCTGAGCCTGGGCACTAGCCCAGCCTAGCTGGGGGGTGGCTCCGCCCCTGCTTCAGCTTAACCAGGATTCTCGGGTTTGATTCTGAGCCTTTGAATGTAACAACGTTAAAACCCCTTAGGGAGATCATCTGATTCCCACGCGATTGGAGGGATTAACCTCAAAGTTGAGTGTAGAGGATATCCGATTTATACCAAAAGATACGTATATGAAGATTAATACAAATGTTGATAACATAAAATTTAAATATATCTAATACAATAAATTAGATACCTTACGATCATTTATTTGTAGAAAAGTTGCCTAACTTTTTCTCGATCTCTTTGATCCATTCTCTCTCGTTATTATCTCCCCATTTTCCATCATCAGCCTAAAGGCGCCGTGCCCTGTGTGGAAAAACGGTAGGGAATCTGTTGCATTTATATTAAGTGTCCTCTGTGTGATTATATGTTTCGAAACAAATCGGTAATAATAACAAATCAAATCTCTAACAGTCAAATCAAATCCAAAATGGTCTTCATGACGCAAGAACCAGCGCAAAACAACTAATAAAAATATGGTGAGCGGTGTGAAATAAATTGTTTTCCTGTTTAATTTAATAAAATATGTAATATATTGTTGAAATCAAGTTGTAAAGCAAAAGTAAAGATACCTGTTTTGATTAAATTAAAAATTGTGATGCGAGATATACGTTGGGCTGGTGTCTAGATTGCGCACGATAAGAGATGCAATGTGATTATCAATTGAGAACAGCGGTAATGGGATTTGTGAAGACAACAGGGAATAGAAGATGGTTTTCGTCTAGAAGTTGGAGTTTATTTGTTTATTTTGGCCGTAGATCCTTATTGATAGTATTAAAATAAAAACTGGGGCAAAAGGTTAAGAAGTGGGTGGGTGGGGGGTGGGGGTTGGGGATGTACCCCCTCAGGCAAACATAGATCCGGCTCTGATGCTCTGCTTAATGTATGCTGCTGAGCTTATTCTGTGAGTGGCAACACCAACTCTGGAAGTGTGCCGCCAATACGATTTACTCATTATCGGCAGTAACAGGAAATCACAATATAACATATAGTTATAGAAATTCTGATAAAGTTTCCCTTGTTTCATCTGCTATTAACCTAAATTATCCTCGAGATGCTGCTGTTATTCTCTCTATGCTTTGTAGCCTTTATGCTCCTAAAGTTGAAATTTTTCAGAGGTTTCACAACAAAGGGAAGAGGAAAGTAGGAAGTTTTGAGTAATCTCTTTCCTCCCCGTTCGATTTTGCTGAAACTTCTTCTCTCTGTGTACATTTGTGGATGGCATTAGAAGGCTTTGGAAAAAAAAAATAACAGAAAAAACAGAAACAGTAAAATAAAGATATAGGTTAGGAAATGAGTCATCTGGCTAAATTTAAGTTGTGTAATGGTAACAAATTACCAATCATCATTGTTCGGTTCTCAGATTATTCAGTAATCTGTGTGTTTAATTTTGTTAAAGGGGGTCTAATAAAATGAACAACAATACCATGGCCTTTTTTTTTTTGAGGGAAACAATACCATAGCCTTATAACATGAACTTAAATGTAATTCATTTGCAGCTATGTCGATATTTTTATGTATATTTTTGTTTTCACCATGTAAATTTGTAGTCTCGAGTCCTAACAACACTTTCGTACTCATAACTTGTATTTTTTGGTGTGTTGTGCTCAGAAAGTAAGAAAGTTTCTGGCAACTATATATAAACAATGCTTGGAGTTTGCAAATGTTTGGTTATTTTGGATGATGTATAGATAGTATGCATGTGTAGAATTGAAAAAATGAAAATTTGTTTCCTTAAGCAGTGGACGATTAGATGAATGTGTCTTGTGTGATAGTATTTGGTAAATGGTGGGATCCAGTATTAAATAACTGGACCCTTGCACAAAGCAATTTCTGTTTCTGCTCAAATTTAAATTGATGAAGCCTCTTGAGTTTGGTAAAGTGGCTGAAACTAGACTTGGGCTGATTATAGATTTTTAAGCAGATGTAGTTCAATATAATGAAACAGAAAATGATGACGGTTCAAGTATCTTAATCACACTTTCTTAAGAGACAATAGTTCAGGACTATATTTAGTGTTGCAAACCGAAATTGTAATGAGATCCAAGTTCTGTGAGTGACTTAGTGTATTTGGTCCTTATTATTTTGATGATTTGACCTGACAGCATCTGATAATTGATAACTATACTTTATGACTGTGTTTTACCAAAGTAGCATATCACCCAATTTCCTCTTTCAATTATTAATTCAAATAAGCATATACCATAGCCTTATAATTGATAACTATCCATTGATGCTGCATCCGATTTTTATATTTCCTTTTTTGTTGTTTTGATGATAACTTGGCTTTGCAGTTTAATGACATTTCCCCAATAATAAAAGAAGCGGCAAGAACTGCTGGACCAATATATGGAAAAACTATTCCCAAGCAGAATGCCCCTTTCTGTGAAAAAAAAGTTGTGCTTCAATACAGCCCGGTTTCTGTTTTTGAAGGCAGCAGTGCTTCCTCAGTTGAGAATTCTGGCTTTGATCTGCCTGTCATCCCAGTAAAGCGTGCCCGAAGTAAACGCCGTCGTCCTTCAAGCTTAAATCCTGTATTCTCGATTTCTTTCATTGCTAGCTTACAGGCTTTGCATAAGAAGACATCTGCTTTTGAGTCAGATATAAACAGAGTAAAGAAACAGAAAAAAAGGGAGCTCTCGGGTGATATTGAAACGAAGAAATCCTCATCACAAGAGTCAGTTGTCACGAGAAAGTGCACACATTGTGAGGTCACAGAGACTCCACAATGGAGAGAGGGACCCAACGGTCCCAAAACGCTCTGCAATGCTTGTGGTGTTCGGTACAGGTCTGGTCGCCTCTATCCTGAATACCGGCCGGCGAACAGCCCCACTTTTGTAGCATCTGTGCACTCAAACAGTCACAAGAAGGTTCTGGAGATGCGAGGCGTAGTCATCAAAGACGGTGTTAGGATCCGTCCTAAGTTGGCTTCATCAAATGTTCCCTGA
Protein sequence

>MS.gene68594.t1

DIPNMKGSWFFDKNFNGLSDETFDDLKFFDFPLEDVDANTAEEDWSALGEPCFDVFSVSPAVFCGKIKNENPQLREGFSVPFNDISPIIKEAARTAGPIYGKTIPKQNAPFCEKKVVLQYSPVSVFEGSSASSVENSGFDLPVIPVKRARSKRRRPSSLNPVFSISFIASLQALHKKTSAFESDINRVKKQKKRELSGDIETKKSSSQESVVTRKCTHCEVTETPQWREGPNGPKTLCNACGVRYRSGRLYPEYRPANSPTFVASVHSNSHKKVLEMRGVVIKDGVRIRPKLASSNVP