Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008627.t1 | XP_003599332.1 | 90.8 | 346 | 28 | 1 | 132 | 473 | 128 | 473 | 1.90E-106 | 396.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008627.t1 | Q94KD0 | 82.1 | 117 | 21 | 0 | 320 | 436 | 261 | 377 | 1.0e-52 | 209.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008627.t1 | G7J0R5 | 90.8 | 346 | 28 | 1 | 132 | 473 | 128 | 473 | 1.4e-106 | 396.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008627 | MS.gene79126 | PPI |
| MS.gene067039 | MS.gene008627 | PPI |
| MS.gene75567 | MS.gene008627 | PPI |
| MS.gene045227 | MS.gene008627 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008627.t1 | MTR_3g031740 | 92.507 | 347 | 20 | 3 | 132 | 473 | 128 | 473 | 2.00e-170 | 488 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008627.t1 | AT5G58470 | 59.429 | 350 | 118 | 7 | 133 | 473 | 88 | 422 | 1.06e-80 | 256 |
| MS.gene008627.t1 | AT5G58470 | 59.429 | 350 | 118 | 7 | 133 | 473 | 88 | 422 | 1.06e-80 | 256 |
Find 210 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGCTATGCTGGTGGATA+TGG | 0.228290 | 3.4:+60746431 | MS.gene008627:CDS |
| AAAATTTACACTGATGAAAA+TGG | 0.231047 | 3.4:+60749332 | MS.gene008627:CDS |
| GGTGGTGGTGGTGGAGGATA+TGG | 0.242933 | 3.4:+60746617 | MS.gene008627:CDS |
| TGGAAGAAGTGGAGGGAATA+GGG | 0.270712 | 3.4:+60747538 | MS.gene008627:CDS |
| GGTAGAGGAGGTGGTGGTGG+TGG | 0.277683 | 3.4:+60746608 | MS.gene008627:CDS |
| GGTGGTAGAGGAGGTGGTGG+TGG | 0.291014 | 3.4:+60746605 | MS.gene008627:CDS |
| GCCGCTGGAGCTGGCTCAGC+AGG | 0.295410 | 3.4:-60747866 | None:intergenic |
| GCTGCTGCTGCTCAGTCTTA+TGG | 0.300158 | 3.4:+60747623 | MS.gene008627:CDS |
| ATGGAAGAAGTGGAGGGAAT+AGG | 0.315200 | 3.4:+60747537 | MS.gene008627:CDS |
| TCAATGACAAAGCTCTAGTA+TGG | 0.315643 | 3.4:-60749920 | None:intergenic |
| TATGGTGGGAATGCAAATTA+TGG | 0.325350 | 3.4:+60747674 | MS.gene008627:CDS |
| CCATAATGATCCCGCCTATC+AGG | 0.326075 | 3.4:-60749881 | None:intergenic |
| CATTCATATCCTCCTTCATA+TGG | 0.348243 | 3.4:+60747740 | MS.gene008627:CDS |
| GGTGGAAGAGGCGGTGGTGG+TGG | 0.348847 | 3.4:+60746584 | MS.gene008627:CDS |
| TACGGTGGAAGGAGTGGATA+TGG | 0.352722 | 3.4:+60746539 | MS.gene008627:CDS |
| AAAATCAAATACCTTTCGTT+AGG | 0.358225 | 3.4:-60746845 | None:intergenic |
| GTGATGCACGGAGTGGTGGC+AGG | 0.365974 | 3.4:+60747789 | MS.gene008627:CDS |
| TTCACCGGAGCCGCTGGAGC+TGG | 0.368046 | 3.4:-60747875 | None:intergenic |
| GGTGGTGGTGGTAGAGGAGG+TGG | 0.371502 | 3.4:+60746599 | MS.gene008627:CDS |
| GGTGGAGGTGGTGGCTATGC+TGG | 0.375258 | 3.4:+60746422 | MS.gene008627:CDS |
| GGAAGAGGCGGTGGTGGTGG+TGG | 0.377885 | 3.4:+60746587 | MS.gene008627:CDS |
| TATGGTGGAAGAGGCGGTGG+TGG | 0.379420 | 3.4:+60746581 | MS.gene008627:CDS |
| GCATACCCATGGTTATTTGC+TGG | 0.383632 | 3.4:-60749582 | None:intergenic |
| CACTGCTTCACCGGAGCCGC+TGG | 0.385775 | 3.4:-60747881 | None:intergenic |
| GGTTACGGAGGCGGTGGAGG+TGG | 0.385869 | 3.4:+60746410 | MS.gene008627:CDS |
| CCCTCTGCAGCTCACTCTGC+TGG | 0.387168 | 3.4:+60749392 | MS.gene008627:CDS |
| ACAGGTGGTGGCGGTGGTGG+TGG | 0.390444 | 3.4:+60746740 | MS.gene008627:intron |
| AGTGGTAACCGTGGTGGATT+TGG | 0.398536 | 3.4:+60747836 | MS.gene008627:CDS |
| CGCGGAGGCCGAGGTGGTGG+TGG | 0.399507 | 3.4:+60746779 | MS.gene008627:CDS |
| AGAGGAGGTGGTGGTGGTGG+AGG | 0.402018 | 3.4:+60746611 | MS.gene008627:CDS |
| TGAGCCAGCTCCAGCGGCTC+CGG | 0.402504 | 3.4:+60747871 | MS.gene008627:CDS |
| GGCGGTGGTGGTGGCTTTCA+AGG | 0.402598 | 3.4:+60746749 | MS.gene008627:CDS |
| GGGAATAGGGGTGGCTCATA+TGG | 0.402842 | 3.4:+60747551 | MS.gene008627:CDS |
| TACGGAGGCGGTGGAGGTGG+TGG | 0.410692 | 3.4:+60746413 | MS.gene008627:CDS |
| GGGTATGGTGGAAGAGGCGG+TGG | 0.413274 | 3.4:+60746578 | MS.gene008627:CDS |
| GGCAGGGCTGCGCCTCAAGC+TGG | 0.414310 | 3.4:+60747806 | MS.gene008627:CDS |
| GGTGGTGGTAGAGGAGGTGG+TGG | 0.414314 | 3.4:+60746602 | MS.gene008627:CDS |
| GGCTATGCTGGTGGATATGG+TGG | 0.418256 | 3.4:+60746434 | MS.gene008627:CDS |
| AATGAAAGCGGCGGTGGTTA+CGG | 0.419918 | 3.4:+60746458 | MS.gene008627:CDS |
| GGTGGTGGCCGTGGTGGAAG+TGG | 0.420037 | 3.4:+60746800 | MS.gene008627:CDS |
| CCTGATAGGCGGGATCATTA+TGG | 0.420562 | 3.4:+60749881 | MS.gene008627:CDS |
| GGTAACGATGGTGGAGGTTA+CGG | 0.430518 | 3.4:+60746521 | MS.gene008627:CDS |
| GGCAATAGGGGTGGCTATGG+TGG | 0.434284 | 3.4:+60749833 | MS.gene008627:CDS |
| TAAACAGGTGGTGGCGGTGG+TGG | 0.435666 | 3.4:+60746737 | MS.gene008627:intron |
| GATCGCGGAGGCCGAGGTGG+TGG | 0.437166 | 3.4:+60746776 | MS.gene008627:CDS |
| ATTCATATCCTCCTTCATAT+GGG | 0.437760 | 3.4:+60747741 | MS.gene008627:CDS |
| GGTGGTTACGGAGGCGGTGG+AGG | 0.438292 | 3.4:+60746407 | MS.gene008627:CDS |
| GGAAACGATGGCGGAGGGTA+TGG | 0.438647 | 3.4:+60746563 | MS.gene008627:CDS |
| GGAGGGTATGGTGGAAGAGG+CGG | 0.442381 | 3.4:+60746575 | MS.gene008627:CDS |
| TTCTCATCGCACTGCTTCAC+CGG | 0.442714 | 3.4:-60747890 | None:intergenic |
| TGAGCAGCAGCAGCAGGAGG+AGG | 0.444189 | 3.4:-60747614 | None:intergenic |
| GGAACAATAACTTTGCTAGA+AGG | 0.444355 | 3.4:+60747342 | MS.gene008627:CDS |
| GCTCAGTCTTATGGTGGTGC+TGG | 0.449807 | 3.4:+60747632 | MS.gene008627:CDS |
| GGCCGAGGTGGTGGTGGTGG+TGG | 0.451307 | 3.4:+60746785 | MS.gene008627:CDS |
| GGTAACACGGGTGGTTATGG+TGG | 0.455825 | 3.4:+60747764 | MS.gene008627:CDS |
| GGAGGTAGGTCTGAGAACTA+TGG | 0.457510 | 3.4:+60747470 | MS.gene008627:CDS |
| GATAGGCGCAGAGACAATTC+TGG | 0.458230 | 3.4:+60749857 | MS.gene008627:CDS |
| GGCTCATATGGCGGTAATCA+AGG | 0.459264 | 3.4:+60747563 | MS.gene008627:CDS |
| GGCTCTGTGCCACCTTCCTA+TGG | 0.463627 | 3.4:+60746377 | MS.gene008627:CDS |
| ACCCTAGATCGAATCATGTC+TGG | 0.466378 | 3.4:+60746329 | None:intergenic |
| GGAGGCCGAGGTGGTGGTGG+TGG | 0.467884 | 3.4:+60746782 | MS.gene008627:CDS |
| GGTGGAGATCGCGGAGGCCG+AGG | 0.468310 | 3.4:+60746770 | MS.gene008627:CDS |
| AACGGTGGTGGAAGAGGCTA+TGG | 0.472416 | 3.4:+60746497 | MS.gene008627:CDS |
| AGGGGCAATAGGGGTGGCTA+TGG | 0.473447 | 3.4:+60749830 | MS.gene008627:intron |
| AGCGGAAACGGTGGTGGAAG+AGG | 0.473501 | 3.4:+60746491 | MS.gene008627:CDS |
| AAATCAAATACCTTTCGTTA+GGG | 0.473988 | 3.4:-60746844 | None:intergenic |
| GAGACAATTCTGGTCCTGAT+AGG | 0.475626 | 3.4:+60749867 | MS.gene008627:CDS |
| AGCGGTGGTTACGGAGGCGG+TGG | 0.476801 | 3.4:+60746404 | MS.gene008627:CDS |
| TATGGTGCTAGCGGTGGTTA+CGG | 0.476963 | 3.4:+60746395 | MS.gene008627:CDS |
| GGCGGAGGGTATGGTGGAAG+AGG | 0.479378 | 3.4:+60746572 | MS.gene008627:CDS |
| AATAGAGGAGGAAGTGGTGG+AGG | 0.482009 | 3.4:+60747431 | MS.gene008627:CDS |
| GGTCCACCGGTATAGCTTGT+AGG | 0.482874 | 3.4:-60747716 | None:intergenic |
| GGAAGAAGTGGAGGGAATAG+GGG | 0.485877 | 3.4:+60747539 | MS.gene008627:CDS |
| TTATTTGCTGGAGGAGCCCT+TGG | 0.485958 | 3.4:-60749570 | None:intergenic |
| TCCTGCTGAGCCAGCTCCAG+CGG | 0.489524 | 3.4:+60747865 | MS.gene008627:CDS |
| TGGAAGAATAAAGCAGAAGA+GGG | 0.490876 | 3.4:+60749280 | MS.gene008627:CDS |
| ACCAGCAGAGTGAGCTGCAG+AGG | 0.491814 | 3.4:-60749393 | None:intergenic |
| GCTAGCGGTGGTTACGGAGG+CGG | 0.492927 | 3.4:+60746401 | MS.gene008627:CDS |
| TACGGTCACGATGCCGGAGG+TGG | 0.496771 | 3.4:+60746356 | MS.gene008627:CDS |
| GGTAACGACCGCGGTGGCGG+TGG | 0.498283 | 3.4:+60747404 | MS.gene008627:CDS |
| CGAATCATGTCTGGAGGGTA+CGG | 0.500460 | 3.4:+60746338 | None:intergenic |
| CAGTCTTATGGTGGTGCTGG+TGG | 0.508179 | 3.4:+60747635 | MS.gene008627:CDS |
| GCCACCGCGGTCGTTACCAC+TGG | 0.508578 | 3.4:-60747399 | None:intergenic |
| GGAGGTTACGGTGGAAGGAG+TGG | 0.509529 | 3.4:+60746533 | MS.gene008627:CDS |
| GGTGGTGGTGGTGGCCGTGG+TGG | 0.511700 | 3.4:+60746794 | MS.gene008627:CDS |
| GGAACAAAAGGAAGCGGAAA+CGG | 0.514123 | 3.4:+60746479 | MS.gene008627:CDS |
| GGCAGAGAAGATGGTGGCTA+TGG | 0.517731 | 3.4:+60747584 | MS.gene008627:CDS |
| GGCGGTGGTTACGGAACAAA+AGG | 0.520392 | 3.4:+60746467 | MS.gene008627:CDS |
| CTAATGATTATAACGGTGGA+AGG | 0.521755 | 3.4:+60747501 | MS.gene008627:CDS |
| CAATTCTGGTCCTGATAGGC+GGG | 0.522423 | 3.4:+60749871 | MS.gene008627:CDS |
| AAAGGAAGCGGAAACGGTGG+TGG | 0.522540 | 3.4:+60746485 | MS.gene008627:CDS |
| TATAATAGAGGAGGAAGTGG+TGG | 0.523941 | 3.4:+60747428 | MS.gene008627:CDS |
| GAAGTGGCAGAGATGGAGAT+TGG | 0.524419 | 3.4:+60746816 | MS.gene008627:CDS |
| TAAGACTGAGCAGCAGCAGC+AGG | 0.526338 | 3.4:-60747620 | None:intergenic |
| TTGGAAGAATAAAGCAGAAG+AGG | 0.529281 | 3.4:+60749279 | MS.gene008627:CDS |
| GGAAACTATCCACCTACCTA+TGG | 0.530624 | 3.4:+60747656 | MS.gene008627:CDS |
| AATTCATCAGCAGTCACATC+GGG | 0.530860 | 3.4:-60747962 | None:intergenic |
| AGTGGTAACGACCGCGGTGG+CGG | 0.534789 | 3.4:+60747401 | MS.gene008627:CDS |
| TATGGTGGAAACGATGGCGG+AGG | 0.534802 | 3.4:+60746557 | MS.gene008627:CDS |
| GGTAATCAAGGCAGAGAAGA+TGG | 0.534827 | 3.4:+60747575 | MS.gene008627:CDS |
| GGAGGGTACGGTCACGATGC+CGG | 0.536528 | 3.4:+60746350 | MS.gene008627:CDS |
| GGTGGTGGTGGAGGATATGG+AGG | 0.536529 | 3.4:+60746620 | MS.gene008627:CDS |
| AATAACAATGATGGAAGAAG+TGG | 0.537553 | 3.4:+60747527 | MS.gene008627:CDS |
| GGTGGGAATGAAAGCGGCGG+TGG | 0.537588 | 3.4:+60746452 | MS.gene008627:CDS |
| GGAGGTGATGCACGGAGTGG+TGG | 0.539236 | 3.4:+60747785 | MS.gene008627:CDS |
| AGGTGGCACAGAGCCACCTC+CGG | 0.540379 | 3.4:-60746369 | None:intergenic |
| AATGATTATAACGGTGGAAG+GGG | 0.542304 | 3.4:+60747503 | MS.gene008627:CDS |
| GGAAGGGGTAATAACAATGA+TGG | 0.542527 | 3.4:+60747518 | MS.gene008627:CDS |
| AACAATGATGGAAGAAGTGG+AGG | 0.542762 | 3.4:+60747530 | MS.gene008627:CDS |
| GGTGGAGGATATGGAGGTCG+AGG | 0.544450 | 3.4:+60746626 | MS.gene008627:CDS |
| ATAATTTGCATTCCCACCAT+AGG | 0.545167 | 3.4:-60747672 | None:intergenic |
| GGAGATCGCGGAGGCCGAGG+TGG | 0.545813 | 3.4:+60746773 | MS.gene008627:CDS |
| AACTATCCACCTACCTATGG+TGG | 0.546559 | 3.4:+60747659 | MS.gene008627:CDS |
| GGTAACCGTGGTGGATTTGG+TGG | 0.546944 | 3.4:+60747839 | MS.gene008627:CDS |
| TTCATATCCTCCTTCATATG+GGG | 0.547887 | 3.4:+60747742 | MS.gene008627:CDS |
| GCTATGCTGGTGGATATGGT+GGG | 0.548389 | 3.4:+60746435 | MS.gene008627:CDS |
| CCTCCACCTACAAGCTATAC+CGG | 0.548403 | 3.4:+60747710 | MS.gene008627:CDS |
| AACGATGGCGGAGGGTATGG+TGG | 0.548905 | 3.4:+60746566 | MS.gene008627:CDS |
| AGAGGGGTTATAAAGATCAA+TGG | 0.552074 | 3.4:+60749297 | MS.gene008627:CDS |
| ATGGTGGAGGTTACGGTGGA+AGG | 0.552221 | 3.4:+60746528 | MS.gene008627:CDS |
| GGATATAATAGAGGAGGAAG+TGG | 0.557118 | 3.4:+60747425 | MS.gene008627:CDS |
| GGCTTTCAAGGTGGAGATCG+CGG | 0.561008 | 3.4:+60746761 | MS.gene008627:CDS |
| GGGGTGGCTATGGTGGAGAT+AGG | 0.562476 | 3.4:+60749840 | MS.gene008627:CDS |
| AACACGGGTGGTTATGGTGG+AGG | 0.565229 | 3.4:+60747767 | MS.gene008627:CDS |
| GGCAGAGAAATCTGCACCAA+GGG | 0.566623 | 3.4:+60749554 | MS.gene008627:CDS |
| TCTGCAGCTCACTCTGCTGG+TGG | 0.567434 | 3.4:+60749395 | MS.gene008627:CDS |
| GGTAGAACTAATGATTATAA+CGG | 0.570159 | 3.4:+60747494 | MS.gene008627:CDS |
| GACTGAGCAGCAGCAGCAGG+AGG | 0.572206 | 3.4:-60747617 | None:intergenic |
| GTAACCACCGCTAGCACCAT+AGG | 0.574763 | 3.4:-60746393 | None:intergenic |
| TGATGCACGGAGTGGTGGCA+GGG | 0.575497 | 3.4:+60747790 | MS.gene008627:CDS |
| TAATGATTATAACGGTGGAA+GGG | 0.578394 | 3.4:+60747502 | MS.gene008627:CDS |
| CGTGGTGGAAGTGGCAGAGA+TGG | 0.580429 | 3.4:+60746809 | MS.gene008627:CDS |
| GGAGGTGGTGGCTATGCTGG+TGG | 0.580469 | 3.4:+60746425 | MS.gene008627:CDS |
| GGCTATGGAGGTAACGATGG+TGG | 0.582622 | 3.4:+60746512 | MS.gene008627:CDS |
| CCGGTATAGCTTGTAGGTGG+AGG | 0.590446 | 3.4:-60747710 | None:intergenic |
| CAATTCATCAGCAGTCACAT+CGG | 0.592078 | 3.4:-60747963 | None:intergenic |
| TTACAAAATCAGCGTTGCAA+TGG | 0.592647 | 3.4:+60749533 | MS.gene008627:CDS |
| GGTGGAAGGAGTGGATATGG+TGG | 0.592851 | 3.4:+60746542 | MS.gene008627:CDS |
| ATGGTGGAAACGATGGCGGA+GGG | 0.599478 | 3.4:+60746558 | MS.gene008627:CDS |
| AGGATATGAATGAGGTCCAC+CGG | 0.601187 | 3.4:-60747729 | None:intergenic |
| ACAATTCTGGTCCTGATAGG+CGG | 0.601815 | 3.4:+60749870 | MS.gene008627:CDS |
| GCTGCTGCTCAGTCTTATGG+TGG | 0.602467 | 3.4:+60747626 | MS.gene008627:CDS |
| AGTTCTCAGACCTACCTCCT+CGG | 0.603508 | 3.4:-60747466 | None:intergenic |
| CAGAGGGATCTTCATAAGCA+AGG | 0.603608 | 3.4:-60749376 | None:intergenic |
| GGTGGCGGTGGATATAATAG+AGG | 0.603986 | 3.4:+60747416 | MS.gene008627:CDS |
| TACCCATGGTTATTTGCTGG+AGG | 0.607300 | 3.4:-60749579 | None:intergenic |
| CCTTCCTATGGTGCTAGCGG+TGG | 0.607825 | 3.4:+60746389 | MS.gene008627:CDS |
| CTCCTCCAGCAAATAACCAT+GGG | 0.607908 | 3.4:+60749577 | MS.gene008627:CDS |
| ATAGGCGGGATCATTATGGC+GGG | 0.609988 | 3.4:+60749885 | MS.gene008627:CDS |
| GTTATGGTGGAGGTGATGCA+CGG | 0.610928 | 3.4:+60747777 | MS.gene008627:CDS |
| AAGCAGTGCGATGAGAATTG+TGG | 0.612091 | 3.4:+60747896 | MS.gene008627:CDS |
| CAATGACAAAGCTCTAGTAT+GGG | 0.614329 | 3.4:-60749919 | None:intergenic |
| ATTGGCGTTGCCCTAACGAA+AGG | 0.614670 | 3.4:+60746834 | MS.gene008627:CDS |
| CCAGCAGAGTGAGCTGCAGA+GGG | 0.616910 | 3.4:-60749392 | None:intergenic |
| GGATATGGTGGGAATGAAAG+CGG | 0.617720 | 3.4:+60746446 | MS.gene008627:CDS |
| CTAGATCGAATCATGTCTGG+AGG | 0.618966 | 3.4:+60746332 | None:intergenic |
| GGTGGTGGAAGAGGCTATGG+AGG | 0.620498 | 3.4:+60746500 | MS.gene008627:CDS |
| TTTGCATTCCCACCATAGGT+AGG | 0.621068 | 3.4:-60747668 | None:intergenic |
| GGGTACGGTCACGATGCCGG+AGG | 0.621720 | 3.4:+60746353 | MS.gene008627:CDS |
| AGGAATGAATGTAACAAATG+TGG | 0.621828 | 3.4:+60747362 | MS.gene008627:CDS |
| TATGAAGGAGGATATGAATG+AGG | 0.625021 | 3.4:-60747737 | None:intergenic |
| AGAACTAATGATTATAACGG+TGG | 0.626736 | 3.4:+60747497 | MS.gene008627:CDS |
| AGTGGATATGGTGGAAACGA+TGG | 0.627730 | 3.4:+60746551 | MS.gene008627:CDS |
| ACTATCCACCTACCTATGGT+GGG | 0.629599 | 3.4:+60747660 | MS.gene008627:CDS |
| GCTCCTCCAGCAAATAACCA+TGG | 0.633052 | 3.4:+60749576 | MS.gene008627:CDS |
| GGCGGTGGATATAATAGAGG+AGG | 0.637181 | 3.4:+60747419 | MS.gene008627:CDS |
| GGAAGAATAAAGCAGAAGAG+GGG | 0.637899 | 3.4:+60749281 | MS.gene008627:CDS |
| ACAATGATGGAAGAAGTGGA+GGG | 0.638248 | 3.4:+60747531 | MS.gene008627:CDS |
| TATGGAGGTAACGATGGTGG+AGG | 0.642481 | 3.4:+60746515 | MS.gene008627:CDS |
| AATAGGGGTGGCTCATATGG+CGG | 0.642753 | 3.4:+60747554 | MS.gene008627:CDS |
| TCATCAGCAGTCACATCGGG+TGG | 0.645514 | 3.4:-60747959 | None:intergenic |
| AACGATGGTGGAGGTTACGG+TGG | 0.645624 | 3.4:+60746524 | MS.gene008627:CDS |
| GGTGGTGGTGGCTTTCAAGG+TGG | 0.646259 | 3.4:+60746752 | MS.gene008627:CDS |
| CCACCTTCCTATGGTGCTAG+CGG | 0.648392 | 3.4:+60746386 | MS.gene008627:CDS |
| CCACTGTCATATCCAGCTTG+AGG | 0.648565 | 3.4:-60747818 | None:intergenic |
| GCATTCCCACCATAGGTAGG+TGG | 0.650883 | 3.4:-60747665 | None:intergenic |
| GGTAGGTCTGAGAACTATGG+AGG | 0.651960 | 3.4:+60747473 | MS.gene008627:CDS |
| ATAGCTTGTAGGTGGAGGAA+CGG | 0.652251 | 3.4:-60747705 | None:intergenic |
| TCATATCCTCCTTCATATGG+GGG | 0.652342 | 3.4:+60747743 | MS.gene008627:CDS |
| GGTTACGGAACAAAAGGAAG+CGG | 0.653332 | 3.4:+60746473 | MS.gene008627:CDS |
| GATAGGCGGGATCATTATGG+CGG | 0.653402 | 3.4:+60749884 | MS.gene008627:CDS |
| CCACCGGTATAGCTTGTAGG+TGG | 0.655085 | 3.4:-60747713 | None:intergenic |
| GGTGCTAGCGGTGGTTACGG+AGG | 0.662292 | 3.4:+60746398 | MS.gene008627:CDS |
| AGAAGTGGAGGGAATAGGGG+TGG | 0.662859 | 3.4:+60747542 | MS.gene008627:CDS |
| GGATATGGTGGAAACGATGG+CGG | 0.665261 | 3.4:+60746554 | MS.gene008627:CDS |
| AGAGGCTATGGAGGTAACGA+TGG | 0.666925 | 3.4:+60746509 | MS.gene008627:CDS |
| TAGATCGAATCATGTCTGGA+GGG | 0.672018 | 3.4:+60746333 | None:intergenic |
| TGGCAGAGAAATCTGCACCA+AGG | 0.672792 | 3.4:+60749553 | MS.gene008627:CDS |
| CCACCGCTAGCACCATAGGA+AGG | 0.678251 | 3.4:-60746389 | None:intergenic |
| CCGCTAGCACCATAGGAAGG+TGG | 0.679573 | 3.4:-60746386 | None:intergenic |
| ATGACAGTAACCGAGGAGGT+AGG | 0.680348 | 3.4:+60747456 | MS.gene008627:CDS |
| CATCTCTGCCACTTCCACCA+CGG | 0.681837 | 3.4:-60746808 | None:intergenic |
| GGTGGAGGTGATGCACGGAG+TGG | 0.684645 | 3.4:+60747782 | MS.gene008627:CDS |
| CCACCTACAAGCTATACCGG+TGG | 0.692074 | 3.4:+60747713 | MS.gene008627:CDS |
| ACAAAAGGAAGCGGAAACGG+TGG | 0.693234 | 3.4:+60746482 | MS.gene008627:CDS |
| TATTATATCCACCGCCACCG+CGG | 0.699281 | 3.4:-60747412 | None:intergenic |
| ACCAGTGGTAACGACCGCGG+TGG | 0.699475 | 3.4:+60747398 | MS.gene008627:CDS |
| TCGTTACCACTGGTAGGACA+CGG | 0.701304 | 3.4:-60747389 | None:intergenic |
| GGAGGATATGACAGTAACCG+AGG | 0.705178 | 3.4:+60747449 | MS.gene008627:CDS |
| CCGCGGTCGTTACCACTGGT+AGG | 0.706315 | 3.4:-60747395 | None:intergenic |
| GGTACTCCGTGTCCTACCAG+TGG | 0.710995 | 3.4:+60747383 | MS.gene008627:CDS |
| CCTACCAGTGGTAACGACCG+CGG | 0.714464 | 3.4:+60747395 | MS.gene008627:CDS |
| AATCAAGGCAGAGAAGATGG+TGG | 0.725920 | 3.4:+60747578 | MS.gene008627:CDS |
| CCTCAAGCTGGATATGACAG+TGG | 0.728107 | 3.4:+60747818 | MS.gene008627:CDS |
| TATGACAGTGGTAACCGTGG+TGG | 0.728428 | 3.4:+60747830 | MS.gene008627:CDS |
| TATGGTGGGAATGAAAGCGG+CGG | 0.742368 | 3.4:+60746449 | MS.gene008627:CDS |
| GGATATGACAGTAACCGAGG+AGG | 0.745498 | 3.4:+60747452 | MS.gene008627:CDS |
| TTTCAAGGTGGAGATCGCGG+AGG | 0.746406 | 3.4:+60746764 | MS.gene008627:CDS |
| GAGCTCCACCAAATCCACCA+CGG | 0.765259 | 3.4:-60747844 | None:intergenic |
| GGATATGACAGTGGTAACCG+TGG | 0.777630 | 3.4:+60747827 | MS.gene008627:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAACAAAAAAAAAAAAAAA+AGG | + | chr3.4:60749094-60749113 | MS.gene008627:intron | 10.0% |
| !! | ATATATATATATATAGTTGT+GGG | + | chr3.4:60747321-60747340 | MS.gene008627:intron | 10.0% |
| !! | TATATATATATATATAGTTG+TGG | + | chr3.4:60747320-60747339 | MS.gene008627:intron | 10.0% |
| !! | TTATTATATTTACATAGTTT+AGG | + | chr3.4:60747073-60747092 | MS.gene008627:intron | 10.0% |
| !!! | ATTTTTTTTCTTTGTTTTAT+AGG | + | chr3.4:60749810-60749829 | MS.gene008627:intron | 10.0% |
| !!! | TTTTTTTTCTTTGTTTTATA+GGG | + | chr3.4:60749811-60749830 | MS.gene008627:intron | 10.0% |
| !! | AAGGGAAAAAAAAAAAAAAA+AGG | - | chr3.4:60748396-60748415 | None:intergenic | 15.0% |
| !! | AATAAAAAAGTAATTGCTAT+TGG | - | chr3.4:60748328-60748347 | None:intergenic | 15.0% |
| !! | TTATCACCAAAAAAAAAAAA+AGG | + | chr3.4:60748927-60748946 | MS.gene008627:intron | 15.0% |
| !!! | AATTACTTTTTTATTATTGG+CGG | + | chr3.4:60748333-60748352 | MS.gene008627:intron | 15.0% |
| !!! | AGCAATTACTTTTTTATTAT+TGG | + | chr3.4:60748330-60748349 | MS.gene008627:intron | 15.0% |
| !!! | AGTTTCATATATTATTTTCT+TGG | + | chr3.4:60748479-60748498 | MS.gene008627:intron | 15.0% |
| !!! | TTAGTTAATTTTCATTCTTA+CGG | + | chr3.4:60746683-60746702 | MS.gene008627:intron | 15.0% |
| !!! | TTATTTTTTTCATTCTCTTT+GGG | + | chr3.4:60749198-60749217 | MS.gene008627:intron | 15.0% |
| !!! | TTTATTTTTTTCATTCTCTT+TGG | + | chr3.4:60749197-60749216 | MS.gene008627:intron | 15.0% |
| !!! | TTTTTTTCTTTGTTTTATAG+GGG | + | chr3.4:60749812-60749831 | MS.gene008627:intron | 15.0% |
| !! | AAAATTTACACTGATGAAAA+TGG | + | chr3.4:60749332-60749351 | MS.gene008627:CDS | 20.0% |
| !! | AATTTACGAAACTAAATTGA+TGG | - | chr3.4:60746921-60746940 | None:intergenic | 20.0% |
| !! | ATAAAAATTCCCAGAAAAAA+GGG | - | chr3.4:60748142-60748161 | None:intergenic | 20.0% |
| !! | CATATATAAGTATCATTTAG+CGG | - | chr3.4:60748594-60748613 | None:intergenic | 20.0% |
| !! | GTAATTGGGAAAAATATAAA+AGG | - | chr3.4:60748361-60748380 | None:intergenic | 20.0% |
| !! | TAATATATGAAACTGATATG+TGG | - | chr3.4:60748473-60748492 | None:intergenic | 20.0% |
| !! | TACAACTTATTATGTTTACA+TGG | + | chr3.4:60747129-60747148 | MS.gene008627:intron | 20.0% |
| !! | TAGAAGAATAAAGCAAAAAA+GGG | + | chr3.4:60749167-60749186 | MS.gene008627:intron | 20.0% |
| !! | TTAGAAGAATAAAGCAAAAA+AGG | + | chr3.4:60749166-60749185 | MS.gene008627:intron | 20.0% |
| !! | TTATTATGTTTACATGGTTT+AGG | + | chr3.4:60747135-60747154 | MS.gene008627:intron | 20.0% |
| !! | TTTCTGCAATTAAGATATTA+GGG | + | chr3.4:60746981-60747000 | MS.gene008627:intron | 20.0% |
| !!! | AGGTTTATATTTTCATTAGA+GGG | + | chr3.4:60748781-60748800 | MS.gene008627:intron | 20.0% |
| !!! | ATTTTCAGATTATGATTTGA+GGG | + | chr3.4:60749509-60749528 | MS.gene008627:intron | 20.0% |
| !!! | ATTTTTTTTTTTATCACGAG+TGG | + | chr3.4:60748056-60748075 | MS.gene008627:intron | 20.0% |
| !!! | GAAAAAATTATGATTTTCAG+TGG | + | chr3.4:60746875-60746894 | MS.gene008627:intron | 20.0% |
| !!! | GGGAATTTTTATGAAAAAAA+GGG | + | chr3.4:60748150-60748169 | MS.gene008627:intron | 20.0% |
| !!! | GTGTAAATTTTAATGTTGTA+AGG | - | chr3.4:60749323-60749342 | None:intergenic | 20.0% |
| !!! | TAGGTTTATATTTTCATTAG+AGG | + | chr3.4:60748780-60748799 | MS.gene008627:intron | 20.0% |
| !!! | TGGGAATTTTTATGAAAAAA+AGG | + | chr3.4:60748149-60748168 | MS.gene008627:intron | 20.0% |
| !!! | TTCAAGCCTTTTTTTTTTTT+TGG | - | chr3.4:60748936-60748955 | None:intergenic | 20.0% |
| ! | AAAATCAAATACCTTTCGTT+AGG | - | chr3.4:60746848-60746867 | None:intergenic | 25.0% |
| ! | AAATCAAATACCTTTCGTTA+GGG | - | chr3.4:60746847-60746866 | None:intergenic | 25.0% |
| ! | AATGAAAAGAAGTTGTTAAG+CGG | - | chr3.4:60748425-60748444 | None:intergenic | 25.0% |
| ! | AATTGCAGAAACTAAATAGA+TGG | - | chr3.4:60746972-60746991 | None:intergenic | 25.0% |
| ! | ACAAATGTAACAAAATGTCT+AGG | - | chr3.4:60748815-60748834 | None:intergenic | 25.0% |
| ! | ATATTTCAAGAAAATGGTTG+TGG | - | chr3.4:60748240-60748259 | None:intergenic | 25.0% |
| ! | ATGTTATGATGATTAGAAGA+TGG | - | chr3.4:60749785-60749804 | None:intergenic | 25.0% |
| ! | ATTGCAGAAACTAAATAGAT+GGG | - | chr3.4:60746971-60746990 | None:intergenic | 25.0% |
| ! | CAATGTGTATCTCAAAAATA+TGG | - | chr3.4:60748714-60748733 | None:intergenic | 25.0% |
| ! | CATAAAAATTCCCAGAAAAA+AGG | - | chr3.4:60748143-60748162 | None:intergenic | 25.0% |
| ! | GATGAAAATGGAAAAAACAA+GGG | + | chr3.4:60749344-60749363 | MS.gene008627:CDS | 25.0% |
| ! | GCAACAATATTTCAAGAAAA+TGG | - | chr3.4:60748246-60748265 | None:intergenic | 25.0% |
| ! | GGTAGAACTAATGATTATAA+CGG | + | chr3.4:60747494-60747513 | MS.gene008627:CDS | 25.0% |
| ! | GTTTCTGCAATTAAGATATT+AGG | + | chr3.4:60746980-60746999 | MS.gene008627:intron | 25.0% |
| ! | TAAAGTAGAAAAGAGGTAAT+AGG | + | chr3.4:60749005-60749024 | MS.gene008627:intron | 25.0% |
| ! | TAGATTTGAATCGAAAACAT+GGG | + | chr3.4:60749653-60749672 | MS.gene008627:intron | 25.0% |
| ! | TGATGAAAATGGAAAAAACA+AGG | + | chr3.4:60749343-60749362 | MS.gene008627:CDS | 25.0% |
| ! | TTCTGCAATTAAGATATTAG+GGG | + | chr3.4:60746982-60747001 | MS.gene008627:intron | 25.0% |
| !! | AAAGTAATTGCTATTGGAAA+AGG | - | chr3.4:60748322-60748341 | None:intergenic | 25.0% |
| !! | CATTTTCAGATTATGATTTG+AGG | + | chr3.4:60749508-60749527 | MS.gene008627:intron | 25.0% |
| !! | GACGATTTTTATATAGCTTA+GGG | + | chr3.4:60747045-60747064 | MS.gene008627:intron | 25.0% |
| !! | TTGCTTTATTCTTCTAACTT+AGG | - | chr3.4:60749163-60749182 | None:intergenic | 25.0% |
| !! | TTTTCAGATTATGATTTGAG+GGG | + | chr3.4:60749510-60749529 | MS.gene008627:intron | 25.0% |
| !!! | ACTTGAATTTACTCTGAAAT+TGG | - | chr3.4:60748673-60748692 | None:intergenic | 25.0% |
| !!! | AGATGGGTTTTATATTCTTT+AGG | - | chr3.4:60746955-60746974 | None:intergenic | 25.0% |
| !!! | TTTGTTTTAACTTCCTATGT+TGG | + | chr3.4:60748830-60748849 | MS.gene008627:intron | 25.0% |
| !!! | TTTTTGGTGATAAAATGTTG+AGG | - | chr3.4:60748920-60748939 | None:intergenic | 25.0% |
| AGAACTAATGATTATAACGG+TGG | + | chr3.4:60747497-60747516 | MS.gene008627:CDS | 30.0% | |
| AGGAATGAATGTAACAAATG+TGG | + | chr3.4:60747362-60747381 | MS.gene008627:CDS | 30.0% | |
| ATATAATCCTGTTGTACTTG+TGG | + | chr3.4:60748754-60748773 | MS.gene008627:intron | 30.0% | |
| ATTCATATCCTCCTTCATAT+GGG | + | chr3.4:60747741-60747760 | MS.gene008627:CDS | 30.0% | |
| GGAAGAATAAAGTAGAAAAG+AGG | + | chr3.4:60748998-60749017 | MS.gene008627:intron | 30.0% | |
| GTAGATTTGAATCGAAAACA+TGG | + | chr3.4:60749652-60749671 | MS.gene008627:intron | 30.0% | |
| TAATGATTATAACGGTGGAA+GGG | + | chr3.4:60747502-60747521 | MS.gene008627:CDS | 30.0% | |
| TTAAGCATAAATGTCGTAAG+TGG | + | chr3.4:60749745-60749764 | MS.gene008627:intron | 30.0% | |
| ! | AATAACAATGATGGAAGAAG+TGG | + | chr3.4:60747527-60747546 | MS.gene008627:CDS | 30.0% |
| ! | ACAAAATGTCTAGAATGTTG+AGG | - | chr3.4:60749120-60749139 | None:intergenic | 30.0% |
| ! | GGACGATTTTTATATAGCTT+AGG | + | chr3.4:60747044-60747063 | MS.gene008627:intron | 30.0% |
| ! | GTTTAGGTACTAGATTTTGA+CGG | + | chr3.4:60747089-60747108 | MS.gene008627:intron | 30.0% |
| !! | TGACGGATTTCATAAAGTTT+AGG | + | chr3.4:60747106-60747125 | MS.gene008627:intron | 30.0% |
| !! | TTCTCTTTGAGAAGTATTAG+AGG | + | chr3.4:60748894-60748913 | MS.gene008627:intron | 30.0% |
| !!! | TTTGTTTTATAGGGGCAATA+GGG | + | chr3.4:60749820-60749839 | MS.gene008627:intron | 30.0% |
| AAAATTCCCAGAAAAAAGGG+CGG | - | chr3.4:60748139-60748158 | None:intergenic | 35.0% | |
| AAATCGGAGAGTGATAGTTT+AGG | + | chr3.4:60747162-60747181 | MS.gene008627:intron | 35.0% | |
| AATCGGAGAGTGATAGTTTA+GGG | + | chr3.4:60747163-60747182 | MS.gene008627:intron | 35.0% | |
| AATGATTATAACGGTGGAAG+GGG | + | chr3.4:60747503-60747522 | MS.gene008627:CDS | 35.0% | |
| ACATGGTTTAGGTGCTAAAT+CGG | + | chr3.4:60747146-60747165 | MS.gene008627:intron | 35.0% | |
| AGAGGGGTTATAAAGATCAA+TGG | + | chr3.4:60749297-60749316 | MS.gene008627:CDS | 35.0% | |
| AGGAACTGCTATGTAGTAAT+TGG | - | chr3.4:60748376-60748395 | None:intergenic | 35.0% | |
| ATAAAGCAAAAAAGGGTAGC+AGG | + | chr3.4:60749174-60749193 | MS.gene008627:intron | 35.0% | |
| ATGTAACAGAACGTCTAGAA+TGG | - | chr3.4:60749241-60749260 | None:intergenic | 35.0% | |
| ATGTACAGTTAGAGACTAAG+TGG | + | chr3.4:60747023-60747042 | MS.gene008627:intron | 35.0% | |
| CATTCATATCCTCCTTCATA+TGG | + | chr3.4:60747740-60747759 | MS.gene008627:CDS | 35.0% | |
| CATTGAATTGTGCTTTGTGT+AGG | + | chr3.4:60748729-60748748 | MS.gene008627:intron | 35.0% | |
| CATTTAGCGGAAGTAATCAA+AGG | - | chr3.4:60748581-60748600 | None:intergenic | 35.0% | |
| CTAATGATTATAACGGTGGA+AGG | + | chr3.4:60747501-60747520 | MS.gene008627:CDS | 35.0% | |
| CTACTTTATTCTTCCAACCT+AGG | - | chr3.4:60748993-60749012 | None:intergenic | 35.0% | |
| GATATTAGGGGCTAAAATGA+CGG | + | chr3.4:60746994-60747013 | MS.gene008627:intron | 35.0% | |
| GGAACAATAACTTTGCTAGA+AGG | + | chr3.4:60747342-60747361 | MS.gene008627:CDS | 35.0% | |
| GGAACTGCTATGTAGTAATT+GGG | - | chr3.4:60748375-60748394 | None:intergenic | 35.0% | |
| TACACAATGGATCTATCTGT+TGG | + | chr3.4:60749607-60749626 | MS.gene008627:intron | 35.0% | |
| TATGAAGGAGGATATGAATG+AGG | - | chr3.4:60747740-60747759 | None:intergenic | 35.0% | |
| TGGAAGAATAAAGCAGAAGA+GGG | + | chr3.4:60748850-60748869 | MS.gene008627:intron | 35.0% | |
| TTACAAAATCAGCGTTGCAA+TGG | + | chr3.4:60749533-60749552 | MS.gene008627:CDS | 35.0% | |
| TTCATATCCTCCTTCATATG+GGG | + | chr3.4:60747742-60747761 | MS.gene008627:CDS | 35.0% | |
| TTCTCTTTGCGAAGAATTAG+AGG | + | chr3.4:60749040-60749059 | MS.gene008627:intron | 35.0% | |
| TTGGAAGAATAAAGCAGAAG+AGG | + | chr3.4:60748849-60748868 | MS.gene008627:intron | 35.0% | |
| ! | ATAATTTGCATTCCCACCAT+AGG | - | chr3.4:60747675-60747694 | None:intergenic | 35.0% |
| ! | CTGCTTTATTCTTCCAACAT+AGG | - | chr3.4:60748846-60748865 | None:intergenic | 35.0% |
| ! | GATGAATTGCAGCAACTTTT+TGG | + | chr3.4:60747977-60747996 | MS.gene008627:CDS | 35.0% |
| ! | GGATTGACCTGATTTTAAAC+AGG | + | chr3.4:60746722-60746741 | MS.gene008627:intron | 35.0% |
| ! | TACATGTGTTTTCACTACCT+AGG | + | chr3.4:60749256-60749275 | MS.gene008627:intron | 35.0% |
| ! | TATGGTGGGAATGCAAATTA+TGG | + | chr3.4:60747674-60747693 | MS.gene008627:CDS | 35.0% |
| ! | TTGACCTGATTTTAAACAGG+TGG | + | chr3.4:60746725-60746744 | MS.gene008627:intron | 35.0% |
| !! | GGTGATAGTGGCTTAAAAAA+AGG | - | chr3.4:60748290-60748309 | None:intergenic | 35.0% |
| !! | TTAGGGTTAATCAGGTTGAT+TGG | - | chr3.4:60748114-60748133 | None:intergenic | 35.0% |
| !! | TTGTTTTATAGGGGCAATAG+GGG | + | chr3.4:60749821-60749840 | MS.gene008627:intron | 35.0% |
| !! | TTTTGTTGTGTGTGTGTGTA+GGG | - | chr3.4:60749083-60749102 | None:intergenic | 35.0% |
| !! | TTTTTGTTGTGTGTGTGTGT+AGG | - | chr3.4:60749084-60749103 | None:intergenic | 35.0% |
| !!! | CTTTGTTTTATAGGGGCAAT+AGG | + | chr3.4:60749819-60749838 | MS.gene008627:intron | 35.0% |
| AAATTCCCAGAAAAAAGGGC+GGG | - | chr3.4:60748138-60748157 | None:intergenic | 40.0% | |
| AATTCATCAGCAGTCACATC+GGG | - | chr3.4:60747965-60747984 | None:intergenic | 40.0% | |
| AGTGGTAGAAGTTATGGAAG+TGG | - | chr3.4:60748214-60748233 | None:intergenic | 40.0% | |
| CAATTCATCAGCAGTCACAT+CGG | - | chr3.4:60747966-60747985 | None:intergenic | 40.0% | |
| CATGGGTATGCATTACACAA+TGG | + | chr3.4:60749594-60749613 | MS.gene008627:intron | 40.0% | |
| CATTGTGTAATGCATACCCA+TGG | - | chr3.4:60749596-60749615 | None:intergenic | 40.0% | |
| CCTATTACCACAAGTACAAC+AGG | - | chr3.4:60748764-60748783 | None:intergenic | 40.0% | |
| CCTGTTGTACTTGTGGTAAT+AGG | + | chr3.4:60748761-60748780 | MS.gene008627:intron | 40.0% | |
| CTTCCATAACTTCTACCACT+AGG | + | chr3.4:60748214-60748233 | MS.gene008627:intron | 40.0% | |
| GGAAGAATAAAGCAGAAGAG+GGG | + | chr3.4:60748851-60748870 | MS.gene008627:intron | 40.0% | |
| GGAAGGGGTAATAACAATGA+TGG | + | chr3.4:60747518-60747537 | MS.gene008627:CDS | 40.0% | |
| GGATATAATAGAGGAGGAAG+TGG | + | chr3.4:60747425-60747444 | MS.gene008627:CDS | 40.0% | |
| TAAAGCAGAAGAGGGGAAAT+AGG | + | chr3.4:60748858-60748877 | MS.gene008627:intron | 40.0% | |
| TACGGTGTCTTTAATTGCTG+TGG | + | chr3.4:60746701-60746720 | MS.gene008627:intron | 40.0% | |
| TATAATAGAGGAGGAAGTGG+TGG | + | chr3.4:60747428-60747447 | MS.gene008627:CDS | 40.0% | |
| TATTGGAAAAGGAACCGTCA+AGG | - | chr3.4:60748311-60748330 | None:intergenic | 40.0% | |
| TCATATCCTCCTTCATATGG+GGG | + | chr3.4:60747743-60747762 | MS.gene008627:CDS | 40.0% | |
| TGAAAAAAAGGGTTTGCGCA+AGG | + | chr3.4:60748161-60748180 | MS.gene008627:intron | 40.0% | |
| TTAAGCCACTATCACCTTGA+CGG | + | chr3.4:60748294-60748313 | MS.gene008627:intron | 40.0% | |
| TTAGCGGAAGTAATCAAAGG+TGG | - | chr3.4:60748578-60748597 | None:intergenic | 40.0% | |
| ! | AACAATGATGGAAGAAGTGG+AGG | + | chr3.4:60747530-60747549 | MS.gene008627:CDS | 40.0% |
| ! | ACAATGATGGAAGAAGTGGA+GGG | + | chr3.4:60747531-60747550 | MS.gene008627:CDS | 40.0% |
| ! | ACCTGATTTTAAACAGGTGG+TGG | + | chr3.4:60746728-60746747 | MS.gene008627:intron | 40.0% |
| ! | CTGCTTTATTCTTCCAACCT+AGG | - | chr3.4:60749276-60749295 | None:intergenic | 40.0% |
| ! | GAATTGCAGCAACTTTTTGG+AGG | + | chr3.4:60747980-60747999 | MS.gene008627:CDS | 40.0% |
| ! | TCTGCTGGTGGTTTTTACAA+CGG | + | chr3.4:60749407-60749426 | MS.gene008627:CDS | 40.0% |
| ! | TGTGTTTTCACTACCTAGGT+TGG | + | chr3.4:60749260-60749279 | MS.gene008627:intron | 40.0% |
| ! | TTTGTTGTGTGTGTGTGTAG+GGG | - | chr3.4:60749082-60749101 | None:intergenic | 40.0% |
| !! | TGATTTTAAACAGGTGGTGG+CGG | + | chr3.4:60746731-60746750 | MS.gene008627:intron | 40.0% |
| !! | TTCTCTTTGGGAAGTATCAG+TGG | + | chr3.4:60749210-60749229 | MS.gene008627:intron | 40.0% |
| AACTATCCACCTACCTATGG+TGG | + | chr3.4:60747659-60747678 | MS.gene008627:CDS | 45.0% | |
| AAGCAGTGCGATGAGAATTG+TGG | + | chr3.4:60747896-60747915 | MS.gene008627:CDS | 45.0% | |
| AATCAAGGCAGAGAAGATGG+TGG | + | chr3.4:60747578-60747597 | MS.gene008627:CDS | 45.0% | |
| ACAATTCTGGTCCTGATAGG+CGG | + | chr3.4:60749870-60749889 | MS.gene008627:CDS | 45.0% | |
| ACTATCCACCTACCTATGGT+GGG | + | chr3.4:60747660-60747679 | MS.gene008627:CDS | 45.0% | |
| AGAAAATGGTTGTGGCCTAG+TGG | - | chr3.4:60748232-60748251 | None:intergenic | 45.0% | |
| AGGATATGAATGAGGTCCAC+CGG | - | chr3.4:60747732-60747751 | None:intergenic | 45.0% | |
| AGTTGTTAAGCGGTGACGAA+AGG | - | chr3.4:60748415-60748434 | None:intergenic | 45.0% | |
| ATGGAAGAAGTGGAGGGAAT+AGG | + | chr3.4:60747537-60747556 | MS.gene008627:CDS | 45.0% | |
| CAGAAAAAAGGGCGGGATTA+GGG | - | chr3.4:60748131-60748150 | None:intergenic | 45.0% | |
| CAGAGGGATCTTCATAAGCA+AGG | - | chr3.4:60749379-60749398 | None:intergenic | 45.0% | |
| CTCCTCCAGCAAATAACCAT+GGG | + | chr3.4:60749577-60749596 | MS.gene008627:CDS | 45.0% | |
| GAGACAATTCTGGTCCTGAT+AGG | + | chr3.4:60749867-60749886 | MS.gene008627:CDS | 45.0% | |
| GCATACCCATGGTTATTTGC+TGG | - | chr3.4:60749585-60749604 | None:intergenic | 45.0% | |
| GGAAACTATCCACCTACCTA+TGG | + | chr3.4:60747656-60747675 | MS.gene008627:CDS | 45.0% | |
| GGAACAAAAGGAAGCGGAAA+CGG | + | chr3.4:60746479-60746498 | MS.gene008627:CDS | 45.0% | |
| GGTAATCAAGGCAGAGAAGA+TGG | + | chr3.4:60747575-60747594 | MS.gene008627:CDS | 45.0% | |
| GGTAGAAGTTATGGAAGTGG+TGG | - | chr3.4:60748211-60748230 | None:intergenic | 45.0% | |
| GGTTACGGAACAAAAGGAAG+CGG | + | chr3.4:60746473-60746492 | MS.gene008627:CDS | 45.0% | |
| GTTATGGAAGTGGTGGCATA+TGG | - | chr3.4:60748204-60748223 | None:intergenic | 45.0% | |
| GTTGTTAAGCGGTGACGAAA+GGG | - | chr3.4:60748414-60748433 | None:intergenic | 45.0% | |
| TATAAAACCCGTGCATCGCA+CGG | + | chr3.4:60748620-60748639 | MS.gene008627:intron | 45.0% | |
| TCCTTCATATGGGGGTAACA+CGG | + | chr3.4:60747751-60747770 | MS.gene008627:CDS | 45.0% | |
| TGGAAGAAGTGGAGGGAATA+GGG | + | chr3.4:60747538-60747557 | MS.gene008627:CDS | 45.0% | |
| TGGCCTAGTGGTAGAAGTTA+TGG | - | chr3.4:60748220-60748239 | None:intergenic | 45.0% | |
| TTGTTGTGTGTGTGTGTAGG+GGG | - | chr3.4:60749081-60749100 | None:intergenic | 45.0% | |
| TTTGCATTCCCACCATAGGT+AGG | - | chr3.4:60747671-60747690 | None:intergenic | 45.0% | |
| ! | ACAGAACGTCTAGAATGGTG+AGG | - | chr3.4:60749236-60749255 | None:intergenic | 45.0% |
| ! | AGTGGATATGGTGGAAACGA+TGG | + | chr3.4:60746551-60746570 | MS.gene008627:CDS | 45.0% |
| ! | ATAGCTTGTAGGTGGAGGAA+CGG | - | chr3.4:60747708-60747727 | None:intergenic | 45.0% |
| ! | GCCACCACCTGTTTAAAATC+AGG | - | chr3.4:60746732-60746751 | None:intergenic | 45.0% |
| ! | GGATATGGTGGGAATGAAAG+CGG | + | chr3.4:60746446-60746465 | MS.gene008627:CDS | 45.0% |
| ! | TACCCATGGTTATTTGCTGG+AGG | - | chr3.4:60749582-60749601 | None:intergenic | 45.0% |
| ! | TTTTATAGGGGCAATAGGGG+TGG | + | chr3.4:60749824-60749843 | MS.gene008627:intron | 45.0% |
| !! | CAGCAACTTTTTGGAGGCAT+TGG | + | chr3.4:60747986-60748005 | MS.gene008627:CDS | 45.0% |
| !!! | CTAATCCCGCCCTTTTTTCT+GGG | + | chr3.4:60748130-60748149 | MS.gene008627:intron | 45.0% |
| !!! | TACACGCGTTTTAACTGCCT+AGG | + | chr3.4:60748973-60748992 | MS.gene008627:intron | 45.0% |
| AATAGAGGAGGAAGTGGTGG+AGG | + | chr3.4:60747431-60747450 | MS.gene008627:CDS | 50.0% | |
| AATAGGGGTGGCTCATATGG+CGG | + | chr3.4:60747554-60747573 | MS.gene008627:CDS | 50.0% | |
| AATGAAAGCGGCGGTGGTTA+CGG | + | chr3.4:60746458-60746477 | MS.gene008627:CDS | 50.0% | |
| ACAAAAGGAAGCGGAAACGG+TGG | + | chr3.4:60746482-60746501 | MS.gene008627:CDS | 50.0% | |
| AGAGGCTATGGAGGTAACGA+TGG | + | chr3.4:60746509-60746528 | MS.gene008627:CDS | 50.0% | |
| AGGAACCGTCAAGGTGATAG+TGG | - | chr3.4:60748302-60748321 | None:intergenic | 50.0% | |
| AGTTCTCAGACCTACCTCCT+CGG | - | chr3.4:60747469-60747488 | None:intergenic | 50.0% | |
| ATAAAACCCGTGCATCGCAC+GGG | + | chr3.4:60748621-60748640 | MS.gene008627:intron | 50.0% | |
| ATAGGCGGGATCATTATGGC+GGG | + | chr3.4:60749885-60749904 | MS.gene008627:CDS | 50.0% | |
| ATGACAGTAACCGAGGAGGT+AGG | + | chr3.4:60747456-60747475 | MS.gene008627:CDS | 50.0% | |
| ATGGAAGTGGTGGCATATGG+TGG | - | chr3.4:60748201-60748220 | None:intergenic | 50.0% | |
| ATTGGCGTTGCCCTAACGAA+AGG | + | chr3.4:60746834-60746853 | MS.gene008627:CDS | 50.0% | |
| CAATTCTGGTCCTGATAGGC+GGG | + | chr3.4:60749871-60749890 | MS.gene008627:CDS | 50.0% | |
| CCACTGTCATATCCAGCTTG+AGG | - | chr3.4:60747821-60747840 | None:intergenic | 50.0% | |
| CCAGAAAAAAGGGCGGGATT+AGG | - | chr3.4:60748132-60748151 | None:intergenic | 50.0% | |
| CCATAATGATCCCGCCTATC+AGG | - | chr3.4:60749884-60749903 | None:intergenic | 50.0% | |
| CCTCAAGCTGGATATGACAG+TGG | + | chr3.4:60747818-60747837 | MS.gene008627:CDS | 50.0% | |
| CCTCCACCTACAAGCTATAC+CGG | + | chr3.4:60747710-60747729 | MS.gene008627:CDS | 50.0% | |
| CCTGATAGGCGGGATCATTA+TGG | + | chr3.4:60749881-60749900 | MS.gene008627:CDS | 50.0% | |
| CCTTCATATGGGGGTAACAC+GGG | + | chr3.4:60747752-60747771 | MS.gene008627:CDS | 50.0% | |
| GAAGTGGCAGAGATGGAGAT+TGG | + | chr3.4:60746816-60746835 | MS.gene008627:CDS | 50.0% | |
| GATAGGCGCAGAGACAATTC+TGG | + | chr3.4:60749857-60749876 | MS.gene008627:CDS | 50.0% | |
| GATAGGCGGGATCATTATGG+CGG | + | chr3.4:60749884-60749903 | MS.gene008627:CDS | 50.0% | |
| GCTCCTCCAGCAAATAACCA+TGG | + | chr3.4:60749576-60749595 | MS.gene008627:CDS | 50.0% | |
| GGAAGAAGTGGAGGGAATAG+GGG | + | chr3.4:60747539-60747558 | MS.gene008627:CDS | 50.0% | |
| GGAGGATATGACAGTAACCG+AGG | + | chr3.4:60747449-60747468 | MS.gene008627:CDS | 50.0% | |
| GGAGGTAGGTCTGAGAACTA+TGG | + | chr3.4:60747470-60747489 | MS.gene008627:CDS | 50.0% | |
| GGATATGACAGTAACCGAGG+AGG | + | chr3.4:60747452-60747471 | MS.gene008627:CDS | 50.0% | |
| GGATATGACAGTGGTAACCG+TGG | + | chr3.4:60747827-60747846 | MS.gene008627:CDS | 50.0% | |
| GGCAGAGAAATCTGCACCAA+GGG | + | chr3.4:60749554-60749573 | MS.gene008627:CDS | 50.0% | |
| GGCGGTGGATATAATAGAGG+AGG | + | chr3.4:60747419-60747438 | MS.gene008627:CDS | 50.0% | |
| GGCTCATATGGCGGTAATCA+AGG | + | chr3.4:60747563-60747582 | MS.gene008627:CDS | 50.0% | |
| GGTAGGTCTGAGAACTATGG+AGG | + | chr3.4:60747473-60747492 | MS.gene008627:CDS | 50.0% | |
| GTAGGGGGGATAGAATGTTG+AGG | - | chr3.4:60749066-60749085 | None:intergenic | 50.0% | |
| GTGTTACCCCCATATGAAGG+AGG | - | chr3.4:60747752-60747771 | None:intergenic | 50.0% | |
| TACGGTGGAAGGAGTGGATA+TGG | + | chr3.4:60746539-60746558 | MS.gene008627:CDS | 50.0% | |
| TATGACAGTGGTAACCGTGG+TGG | + | chr3.4:60747830-60747849 | MS.gene008627:CDS | 50.0% | |
| TATTATATCCACCGCCACCG+CGG | - | chr3.4:60747415-60747434 | None:intergenic | 50.0% | |
| TCGTTACCACTGGTAGGACA+CGG | - | chr3.4:60747392-60747411 | None:intergenic | 50.0% | |
| TGGCAGAGAAATCTGCACCA+AGG | + | chr3.4:60749553-60749572 | MS.gene008627:CDS | 50.0% | |
| TGGTGGCATATGGTGGTACT+TGG | - | chr3.4:60748194-60748213 | None:intergenic | 50.0% | |
| TGTTGTGTGTGTGTGTAGGG+GGG | - | chr3.4:60749080-60749099 | None:intergenic | 50.0% | |
| TTCTCATCGCACTGCTTCAC+CGG | - | chr3.4:60747893-60747912 | None:intergenic | 50.0% | |
| ! | GCTATGCTGGTGGATATGGT+GGG | + | chr3.4:60746435-60746454 | MS.gene008627:CDS | 50.0% |
| ! | GGATATGGTGGAAACGATGG+CGG | + | chr3.4:60746554-60746573 | MS.gene008627:CDS | 50.0% |
| ! | GGTGGCGGTGGATATAATAG+AGG | + | chr3.4:60747416-60747435 | MS.gene008627:CDS | 50.0% |
| ! | GTTATGGTGGAGGTGATGCA+CGG | + | chr3.4:60747777-60747796 | MS.gene008627:CDS | 50.0% |
| ! | TATGGAGGTAACGATGGTGG+AGG | + | chr3.4:60746515-60746534 | MS.gene008627:CDS | 50.0% |
| ! | TATGGTGCTAGCGGTGGTTA+CGG | + | chr3.4:60746395-60746414 | MS.gene008627:CDS | 50.0% |
| ! | TATGGTGGGAATGAAAGCGG+CGG | + | chr3.4:60746449-60746468 | MS.gene008627:CDS | 50.0% |
| ! | TTATTTGCTGGAGGAGCCCT+TGG | - | chr3.4:60749573-60749592 | None:intergenic | 50.0% |
| !! | AGTGGTAACCGTGGTGGATT+TGG | + | chr3.4:60747836-60747855 | MS.gene008627:CDS | 50.0% |
| !! | GGTAACGATGGTGGAGGTTA+CGG | + | chr3.4:60746521-60746540 | MS.gene008627:CDS | 50.0% |
| !!! | CCTAATCCCGCCCTTTTTTC+TGG | + | chr3.4:60748129-60748148 | MS.gene008627:intron | 50.0% |
| !!! | CGCGTTTTAACTGCCTAGGT+TGG | + | chr3.4:60748977-60748996 | MS.gene008627:intron | 50.0% |
| !!! | TTTTAAACAGGTGGTGGCGG+TGG | + | chr3.4:60746734-60746753 | MS.gene008627:intron | 50.0% |
| AAAGGAAGCGGAAACGGTGG+TGG | + | chr3.4:60746485-60746504 | MS.gene008627:CDS | 55.0% | |
| AACACGGGTGGTTATGGTGG+AGG | + | chr3.4:60747767-60747786 | MS.gene008627:CDS | 55.0% | |
| ACTCTAACCCGTGCGATGCA+CGG | - | chr3.4:60748631-60748650 | None:intergenic | 55.0% | |
| AGAAGTGGAGGGAATAGGGG+TGG | + | chr3.4:60747542-60747561 | MS.gene008627:CDS | 55.0% | |
| CCACCTACAAGCTATACCGG+TGG | + | chr3.4:60747713-60747732 | MS.gene008627:CDS | 55.0% | |
| CCCGTGTTACCCCCATATGA+AGG | - | chr3.4:60747755-60747774 | None:intergenic | 55.0% | |
| GAGCTCCACCAAATCCACCA+CGG | - | chr3.4:60747847-60747866 | None:intergenic | 55.0% | |
| GCATTCCCACCATAGGTAGG+TGG | - | chr3.4:60747668-60747687 | None:intergenic | 55.0% | |
| GCTGCTGCTGCTCAGTCTTA+TGG | + | chr3.4:60747623-60747642 | MS.gene008627:CDS | 55.0% | |
| GGCGGTGGTTACGGAACAAA+AGG | + | chr3.4:60746467-60746486 | MS.gene008627:CDS | 55.0% | |
| GGCTATGGAGGTAACGATGG+TGG | + | chr3.4:60746512-60746531 | MS.gene008627:CDS | 55.0% | |
| GGCTTTCAAGGTGGAGATCG+CGG | + | chr3.4:60746761-60746780 | MS.gene008627:CDS | 55.0% | |
| GGGAATAGGGGTGGCTCATA+TGG | + | chr3.4:60747551-60747570 | MS.gene008627:CDS | 55.0% | |
| GGGCGGGATTAGGGTTAATC+AGG | - | chr3.4:60748122-60748141 | None:intergenic | 55.0% | |
| GGTAACACGGGTGGTTATGG+TGG | + | chr3.4:60747764-60747783 | MS.gene008627:CDS | 55.0% | |
| GGTGGAAGGAGTGGATATGG+TGG | + | chr3.4:60746542-60746561 | MS.gene008627:CDS | 55.0% | |
| GTAACCACCGCTAGCACCAT+AGG | - | chr3.4:60746396-60746415 | None:intergenic | 55.0% | |
| TAAGACTGAGCAGCAGCAGC+AGG | - | chr3.4:60747623-60747642 | None:intergenic | 55.0% | |
| TCATATGGGGGTAACACGGG+TGG | + | chr3.4:60747755-60747774 | MS.gene008627:CDS | 55.0% | |
| TCATCAGCAGTCACATCGGG+TGG | - | chr3.4:60747962-60747981 | None:intergenic | 55.0% | |
| TTTCAAGGTGGAGATCGCGG+AGG | + | chr3.4:60746764-60746783 | MS.gene008627:CDS | 55.0% | |
| ! | ATGGTGGAGGTTACGGTGGA+AGG | + | chr3.4:60746528-60746547 | MS.gene008627:CDS | 55.0% |
| ! | CAGTCTTATGGTGGTGCTGG+TGG | + | chr3.4:60747635-60747654 | MS.gene008627:CDS | 55.0% |
| ! | CATCTCTGCCACTTCCACCA+CGG | - | chr3.4:60746811-60746830 | None:intergenic | 55.0% |
| ! | CCACCGGTATAGCTTGTAGG+TGG | - | chr3.4:60747716-60747735 | None:intergenic | 55.0% |
| ! | CCACCTTCCTATGGTGCTAG+CGG | + | chr3.4:60746386-60746405 | MS.gene008627:CDS | 55.0% |
| ! | CCGGTATAGCTTGTAGGTGG+AGG | - | chr3.4:60747713-60747732 | None:intergenic | 55.0% |
| ! | GCTCAGTCTTATGGTGGTGC+TGG | + | chr3.4:60747632-60747651 | MS.gene008627:CDS | 55.0% |
| ! | GCTGCTGCTCAGTCTTATGG+TGG | + | chr3.4:60747626-60747645 | MS.gene008627:CDS | 55.0% |
| ! | GGCAGAGAAGATGGTGGCTA+TGG | + | chr3.4:60747584-60747603 | MS.gene008627:CDS | 55.0% |
| ! | GGCTATGCTGGTGGATATGG+TGG | + | chr3.4:60746434-60746453 | MS.gene008627:CDS | 55.0% |
| ! | GGTCCACCGGTATAGCTTGT+AGG | - | chr3.4:60747719-60747738 | None:intergenic | 55.0% |
| ! | GGTGGCTATGCTGGTGGATA+TGG | + | chr3.4:60746431-60746450 | MS.gene008627:CDS | 55.0% |
| ! | TATGGTGGAAACGATGGCGG+AGG | + | chr3.4:60746557-60746576 | MS.gene008627:CDS | 55.0% |
| !! | AACGATGGTGGAGGTTACGG+TGG | + | chr3.4:60746524-60746543 | MS.gene008627:CDS | 55.0% |
| !! | AACGGTGGTGGAAGAGGCTA+TGG | + | chr3.4:60746497-60746516 | MS.gene008627:CDS | 55.0% |
| !! | ATGGTGGAAACGATGGCGGA+GGG | + | chr3.4:60746558-60746577 | MS.gene008627:CDS | 55.0% |
| !! | GGTAACCGTGGTGGATTTGG+TGG | + | chr3.4:60747839-60747858 | MS.gene008627:CDS | 55.0% |
| ACCAGCAGAGTGAGCTGCAG+AGG | - | chr3.4:60749396-60749415 | None:intergenic | 60.0% | |
| AGGGGCAATAGGGGTGGCTA+TGG | + | chr3.4:60749830-60749849 | MS.gene008627:intron | 60.0% | |
| CCACCGCTAGCACCATAGGA+AGG | - | chr3.4:60746392-60746411 | None:intergenic | 60.0% | |
| CCAGCAGAGTGAGCTGCAGA+GGG | - | chr3.4:60749395-60749414 | None:intergenic | 60.0% | |
| CCGCTAGCACCATAGGAAGG+TGG | - | chr3.4:60746389-60746408 | None:intergenic | 60.0% | |
| CTCTAACCCGTGCGATGCAC+GGG | - | chr3.4:60748630-60748649 | None:intergenic | 60.0% | |
| GGAGGTTACGGTGGAAGGAG+TGG | + | chr3.4:60746533-60746552 | MS.gene008627:CDS | 60.0% | |
| GGCAATAGGGGTGGCTATGG+TGG | + | chr3.4:60749833-60749852 | MS.gene008627:CDS | 60.0% | |
| GGCTCTGTGCCACCTTCCTA+TGG | + | chr3.4:60746377-60746396 | MS.gene008627:CDS | 60.0% | |
| GGGGGTAACACGGGTGGTTA+TGG | + | chr3.4:60747761-60747780 | MS.gene008627:CDS | 60.0% | |
| GGTACTCCGTGTCCTACCAG+TGG | + | chr3.4:60747383-60747402 | MS.gene008627:CDS | 60.0% | |
| GGTGGAGGATATGGAGGTCG+AGG | + | chr3.4:60746626-60746645 | MS.gene008627:CDS | 60.0% | |
| TCTGCAGCTCACTCTGCTGG+TGG | + | chr3.4:60749395-60749414 | MS.gene008627:CDS | 60.0% | |
| TGATGCACGGAGTGGTGGCA+GGG | + | chr3.4:60747790-60747809 | MS.gene008627:CDS | 60.0% | |
| ! | CCTACCAGTGGTAACGACCG+CGG | + | chr3.4:60747395-60747414 | MS.gene008627:CDS | 60.0% |
| ! | CCTTCCTATGGTGCTAGCGG+TGG | + | chr3.4:60746389-60746408 | MS.gene008627:CDS | 60.0% |
| ! | CGTGGTGGAAGTGGCAGAGA+TGG | + | chr3.4:60746809-60746828 | MS.gene008627:CDS | 60.0% |
| ! | GGAGGGTATGGTGGAAGAGG+CGG | + | chr3.4:60746575-60746594 | MS.gene008627:CDS | 60.0% |
| ! | GGGGTGGCTATGGTGGAGAT+AGG | + | chr3.4:60749840-60749859 | MS.gene008627:CDS | 60.0% |
| ! | TATGGTGGAAGAGGCGGTGG+TGG | + | chr3.4:60746581-60746600 | MS.gene008627:CDS | 60.0% |
| !! | AACGATGGCGGAGGGTATGG+TGG | + | chr3.4:60746566-60746585 | MS.gene008627:CDS | 60.0% |
| !! | AGCGGAAACGGTGGTGGAAG+AGG | + | chr3.4:60746491-60746510 | MS.gene008627:CDS | 60.0% |
| !! | GGAAACGATGGCGGAGGGTA+TGG | + | chr3.4:60746563-60746582 | MS.gene008627:CDS | 60.0% |
| !! | GGTGGTGGAAGAGGCTATGG+AGG | + | chr3.4:60746500-60746519 | MS.gene008627:CDS | 60.0% |
| !! | GGTGGTGGTGGAGGATATGG+AGG | + | chr3.4:60746620-60746639 | MS.gene008627:CDS | 60.0% |
| !! | GGTGGTGGTGGCTTTCAAGG+TGG | + | chr3.4:60746752-60746771 | MS.gene008627:CDS | 60.0% |
| !! | GGTGGTGGTGGTGGAGGATA+TGG | + | chr3.4:60746617-60746636 | MS.gene008627:CDS | 60.0% |
| !! | TAAACAGGTGGTGGCGGTGG+TGG | + | chr3.4:60746737-60746756 | MS.gene008627:intron | 60.0% |
| AGGTGGCACAGAGCCACCTC+CGG | - | chr3.4:60746372-60746391 | None:intergenic | 65.0% | |
| CCCTCTGCAGCTCACTCTGC+TGG | + | chr3.4:60749392-60749411 | MS.gene008627:CDS | 65.0% | |
| CCGCGGTCGTTACCACTGGT+AGG | - | chr3.4:60747398-60747417 | None:intergenic | 65.0% | |
| GACTGAGCAGCAGCAGCAGG+AGG | - | chr3.4:60747620-60747639 | None:intergenic | 65.0% | |
| GCTAGCGGTGGTTACGGAGG+CGG | + | chr3.4:60746401-60746420 | MS.gene008627:CDS | 65.0% | |
| GGAGGTGATGCACGGAGTGG+TGG | + | chr3.4:60747785-60747804 | MS.gene008627:CDS | 65.0% | |
| GGTGCTAGCGGTGGTTACGG+AGG | + | chr3.4:60746398-60746417 | MS.gene008627:CDS | 65.0% | |
| GGTGGAGGTGATGCACGGAG+TGG | + | chr3.4:60747782-60747801 | MS.gene008627:CDS | 65.0% | |
| GGTGGGAATGAAAGCGGCGG+TGG | + | chr3.4:60746452-60746471 | MS.gene008627:CDS | 65.0% | |
| GTGATGCACGGAGTGGTGGC+AGG | + | chr3.4:60747789-60747808 | MS.gene008627:CDS | 65.0% | |
| TACGGTCACGATGCCGGAGG+TGG | + | chr3.4:60746356-60746375 | MS.gene008627:CDS | 65.0% | |
| TCCTGCTGAGCCAGCTCCAG+CGG | + | chr3.4:60747865-60747884 | MS.gene008627:CDS | 65.0% | |
| TGAGCAGCAGCAGCAGGAGG+AGG | - | chr3.4:60747617-60747636 | None:intergenic | 65.0% | |
| ! | ACCAGTGGTAACGACCGCGG+TGG | + | chr3.4:60747398-60747417 | MS.gene008627:CDS | 65.0% |
| ! | AGTGGTAACGACCGCGGTGG+CGG | + | chr3.4:60747401-60747420 | MS.gene008627:CDS | 65.0% |
| ! | GGAGGGTACGGTCACGATGC+CGG | + | chr3.4:60746350-60746369 | MS.gene008627:CDS | 65.0% |
| ! | GGAGGTGGTGGCTATGCTGG+TGG | + | chr3.4:60746425-60746444 | MS.gene008627:CDS | 65.0% |
| ! | GGCGGAGGGTATGGTGGAAG+AGG | + | chr3.4:60746572-60746591 | MS.gene008627:CDS | 65.0% |
| ! | GGGTATGGTGGAAGAGGCGG+TGG | + | chr3.4:60746578-60746597 | MS.gene008627:CDS | 65.0% |
| ! | GGTGGAGGTGGTGGCTATGC+TGG | + | chr3.4:60746422-60746441 | MS.gene008627:CDS | 65.0% |
| ! | GGTGGTAGAGGAGGTGGTGG+TGG | + | chr3.4:60746605-60746624 | MS.gene008627:CDS | 65.0% |
| ! | GGTGGTGGTAGAGGAGGTGG+TGG | + | chr3.4:60746602-60746621 | MS.gene008627:CDS | 65.0% |
| !! | AGAGGAGGTGGTGGTGGTGG+AGG | + | chr3.4:60746611-60746630 | MS.gene008627:CDS | 65.0% |
| !! | GGCGGTGGTGGTGGCTTTCA+AGG | + | chr3.4:60746749-60746768 | MS.gene008627:CDS | 65.0% |
| !! | GGTAGAGGAGGTGGTGGTGG+TGG | + | chr3.4:60746608-60746627 | MS.gene008627:CDS | 65.0% |
| !! | GGTGGTGGTGGTAGAGGAGG+TGG | + | chr3.4:60746599-60746618 | MS.gene008627:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGTAGAGG+AGG | + | chr3.4:60746596-60746615 | MS.gene008627:CDS | 65.0% |
| AGCGGTGGTTACGGAGGCGG+TGG | + | chr3.4:60746404-60746423 | MS.gene008627:CDS | 70.0% | |
| CACTGCTTCACCGGAGCCGC+TGG | - | chr3.4:60747884-60747903 | None:intergenic | 70.0% | |
| GCCACCGCGGTCGTTACCAC+TGG | - | chr3.4:60747402-60747421 | None:intergenic | 70.0% | |
| GGCCACCACCACCACCACCT+CGG | - | chr3.4:60746790-60746809 | None:intergenic | 70.0% | |
| GGGTACGGTCACGATGCCGG+AGG | + | chr3.4:60746353-60746372 | MS.gene008627:CDS | 70.0% | |
| GGTGGTTACGGAGGCGGTGG+AGG | + | chr3.4:60746407-60746426 | MS.gene008627:CDS | 70.0% | |
| GGTTACGGAGGCGGTGGAGG+TGG | + | chr3.4:60746410-60746429 | MS.gene008627:CDS | 70.0% | |
| TACGGAGGCGGTGGAGGTGG+TGG | + | chr3.4:60746413-60746432 | MS.gene008627:CDS | 70.0% | |
| TGAGCCAGCTCCAGCGGCTC+CGG | + | chr3.4:60747871-60747890 | MS.gene008627:CDS | 70.0% | |
| TTCACCGGAGCCGCTGGAGC+TGG | - | chr3.4:60747878-60747897 | None:intergenic | 70.0% | |
| ! | GGTGGAAGAGGCGGTGGTGG+TGG | + | chr3.4:60746584-60746603 | MS.gene008627:CDS | 70.0% |
| ! | GGTGGTGGCCGTGGTGGAAG+TGG | + | chr3.4:60746800-60746819 | MS.gene008627:CDS | 70.0% |
| !! | ACAGGTGGTGGCGGTGGTGG+TGG | + | chr3.4:60746740-60746759 | MS.gene008627:intron | 70.0% |
| !! | GGAAGAGGCGGTGGTGGTGG+TGG | + | chr3.4:60746587-60746606 | MS.gene008627:CDS | 70.0% |
| !! | GGCGGTGGTGGTGGTGGTAG+AGG | + | chr3.4:60746593-60746612 | MS.gene008627:CDS | 70.0% |
| GATCGCGGAGGCCGAGGTGG+TGG | + | chr3.4:60746776-60746795 | MS.gene008627:CDS | 75.0% | |
| GGAGATCGCGGAGGCCGAGG+TGG | + | chr3.4:60746773-60746792 | MS.gene008627:CDS | 75.0% | |
| GGCAGGGCTGCGCCTCAAGC+TGG | + | chr3.4:60747806-60747825 | MS.gene008627:CDS | 75.0% | |
| GGTGGAGATCGCGGAGGCCG+AGG | + | chr3.4:60746770-60746789 | MS.gene008627:CDS | 75.0% | |
| ! | GCCGCTGGAGCTGGCTCAGC+AGG | - | chr3.4:60747869-60747888 | None:intergenic | 75.0% |
| ! | GGTAACGACCGCGGTGGCGG+TGG | + | chr3.4:60747404-60747423 | MS.gene008627:CDS | 75.0% |
| !! | GGAGGCCGAGGTGGTGGTGG+TGG | + | chr3.4:60746782-60746801 | MS.gene008627:CDS | 75.0% |
| !! | GGCCGAGGTGGTGGTGGTGG+TGG | + | chr3.4:60746785-60746804 | MS.gene008627:CDS | 75.0% |
| !! | GGTGGTGGTGGTGGCCGTGG+TGG | + | chr3.4:60746794-60746813 | MS.gene008627:CDS | 75.0% |
| !! | GGTGGTGGTGGTGGTGGCCG+TGG | + | chr3.4:60746791-60746810 | MS.gene008627:CDS | 75.0% |
| !! | CGCGGAGGCCGAGGTGGTGG+TGG | + | chr3.4:60746779-60746798 | MS.gene008627:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 60746344 | 60749928 | 60746344 | ID=MS.gene008627 |
| chr3.4 | mRNA | 60746344 | 60749928 | 60746344 | ID=MS.gene008627.t1;Parent=MS.gene008627 |
| chr3.4 | exon | 60746344 | 60746647 | 60746344 | ID=MS.gene008627.t1.exon1;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60746344 | 60746647 | 60746344 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| chr3.4 | exon | 60746744 | 60746855 | 60746744 | ID=MS.gene008627.t1.exon2;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60746744 | 60746855 | 60746744 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| chr3.4 | exon | 60747337 | 60748012 | 60747337 | ID=MS.gene008627.t1.exon3;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60747337 | 60748012 | 60747337 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| chr3.4 | exon | 60749278 | 60749428 | 60749278 | ID=MS.gene008627.t1.exon4;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60749278 | 60749428 | 60749278 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| chr3.4 | exon | 60749517 | 60749598 | 60749517 | ID=MS.gene008627.t1.exon5;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60749517 | 60749598 | 60749517 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| chr3.4 | exon | 60749832 | 60749928 | 60749832 | ID=MS.gene008627.t1.exon6;Parent=MS.gene008627.t1 |
| chr3.4 | CDS | 60749832 | 60749928 | 60749832 | ID=cds.MS.gene008627.t1;Parent=MS.gene008627.t1 |
| Gene Sequence |
| Protein sequence |
