Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75567.t1 | XP_003601832.1 | 100 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.10E-110 | 408.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75567.t1 | Q9LU93 | 88.0 | 208 | 24 | 1 | 1 | 207 | 1 | 208 | 2.5e-99 | 362.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75567.t1 | G7J2H6 | 100.0 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 1.5e-110 | 408.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene75567 | 0.80492 | 1.71E-49 | -1.69E-46 |
| MS.gene049596 | MS.gene75567 | 0.814195 | 1.74E-51 | -1.69E-46 |
| MS.gene049622 | MS.gene75567 | 0.805367 | 1.38E-49 | -1.69E-46 |
| MS.gene04985 | MS.gene75567 | 0.851447 | 8.82E-61 | -1.69E-46 |
| MS.gene049989 | MS.gene75567 | 0.8811 | 3.18E-70 | -1.69E-46 |
| MS.gene050297 | MS.gene75567 | 0.878913 | 1.91E-69 | -1.69E-46 |
| MS.gene050310 | MS.gene75567 | 0.805866 | 1.09E-49 | -1.69E-46 |
| MS.gene050648 | MS.gene75567 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene05124 | MS.gene75567 | 0.812567 | 3.97E-51 | -1.69E-46 |
| MS.gene051263 | MS.gene75567 | 0.856503 | 3.08E-62 | -1.69E-46 |
| MS.gene051423 | MS.gene75567 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene75567 | 0.834779 | 2.46E-56 | -1.69E-46 |
| MS.gene051629 | MS.gene75567 | 0.817888 | 2.61E-52 | -1.69E-46 |
| MS.gene051955 | MS.gene75567 | 0.82505 | 5.79E-54 | -1.69E-46 |
| MS.gene052143 | MS.gene75567 | 0.838729 | 2.42E-57 | -1.69E-46 |
| MS.gene052308 | MS.gene75567 | 0.822551 | 2.23E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene75567 | 0.890675 | 7.95E-74 | -1.69E-46 |
| MS.gene053173 | MS.gene75567 | 0.867508 | 1.30E-65 | -1.69E-46 |
| MS.gene053348 | MS.gene75567 | 0.820051 | 8.41E-53 | -1.69E-46 |
| MS.gene053416 | MS.gene75567 | 0.855034 | 8.27E-62 | -1.69E-46 |
| MS.gene053417 | MS.gene75567 | 0.859178 | 4.95E-63 | -1.69E-46 |
| MS.gene054551 | MS.gene75567 | 0.868741 | 5.21E-66 | -1.69E-46 |
| MS.gene054593 | MS.gene75567 | 0.827967 | 1.17E-54 | -1.69E-46 |
| MS.gene054643 | MS.gene75567 | 0.861536 | 9.58E-64 | -1.69E-46 |
| MS.gene055308 | MS.gene75567 | 0.862124 | 6.33E-64 | -1.69E-46 |
| MS.gene055411 | MS.gene75567 | 0.807283 | 5.45E-50 | -1.69E-46 |
| MS.gene055578 | MS.gene75567 | 0.850811 | 1.33E-60 | -1.69E-46 |
| MS.gene055957 | MS.gene75567 | 0.88516 | 1.03E-71 | -1.69E-46 |
| MS.gene056041 | MS.gene75567 | 0.889388 | 2.53E-73 | -1.69E-46 |
| MS.gene056042 | MS.gene75567 | 0.840827 | 6.88E-58 | -1.69E-46 |
| MS.gene05640 | MS.gene75567 | 0.81518 | 1.06E-51 | -1.69E-46 |
| MS.gene056526 | MS.gene75567 | 0.807469 | 4.98E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene75567 | 0.842524 | 2.45E-58 | -1.69E-46 |
| MS.gene057483 | MS.gene75567 | 0.854361 | 1.30E-61 | -1.69E-46 |
| MS.gene058196 | MS.gene75567 | 0.806985 | 6.30E-50 | -1.69E-46 |
| MS.gene058197 | MS.gene75567 | 0.814488 | 1.50E-51 | -1.69E-46 |
| MS.gene058198 | MS.gene75567 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene058818 | MS.gene75567 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene058844 | MS.gene75567 | 0.828421 | 9.08E-55 | -1.69E-46 |
| MS.gene058853 | MS.gene75567 | 0.823927 | 1.06E-53 | -1.69E-46 |
| MS.gene059300 | MS.gene75567 | 0.853044 | 3.10E-61 | -1.69E-46 |
| MS.gene059553 | MS.gene75567 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene75567 | 0.860095 | 2.62E-63 | -1.69E-46 |
| MS.gene060565 | MS.gene75567 | 0.857245 | 1.86E-62 | -1.69E-46 |
| MS.gene06057 | MS.gene75567 | 0.88229 | 1.18E-70 | -1.69E-46 |
| MS.gene060825 | MS.gene75567 | 0.803859 | 2.85E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene75567 | 0.853116 | 2.96E-61 | -1.69E-46 |
| MS.gene061099 | MS.gene75567 | 0.838415 | 2.91E-57 | -1.69E-46 |
| MS.gene061260 | MS.gene75567 | 0.867186 | 1.65E-65 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75567.t1 | MTR_3g085940 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 7.78e-155 | 427 |
| MS.gene75567.t1 | MTR_3g085940 | 100.000 | 155 | 0 | 0 | 53 | 207 | 1 | 155 | 1.41e-113 | 320 |
| MS.gene75567.t1 | MTR_3g085940 | 96.753 | 154 | 5 | 0 | 1 | 154 | 1 | 154 | 7.38e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75567.t1 | AT3G25980 | 87.981 | 208 | 24 | 1 | 1 | 207 | 1 | 208 | 1.41e-136 | 381 |
| MS.gene75567.t1 | AT3G25980 | 85.577 | 208 | 25 | 2 | 1 | 207 | 1 | 204 | 1.48e-130 | 365 |
| MS.gene75567.t1 | AT3G25980 | 87.742 | 155 | 19 | 0 | 53 | 207 | 1 | 155 | 2.29e-101 | 290 |
| MS.gene75567.t1 | AT3G25980 | 87.742 | 155 | 19 | 0 | 53 | 207 | 1 | 155 | 2.29e-101 | 290 |
Find 49 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTAACCGCTCAGCTTTC+TGG | 0.243002 | 3.2:+73766597 | MS.gene75567:CDS |
| ACGAAGAGTGATTATGTCTT+TGG | 0.305082 | 3.2:-73766204 | None:intergenic |
| AGCGGTTAAATTGGTTATAA+AGG | 0.310452 | 3.2:-73766586 | None:intergenic |
| AGAAAGCTGAGCGGTTAAAT+TGG | 0.334716 | 3.2:-73766595 | None:intergenic |
| TGCTGAAATTCCACCTTTCA+AGG | 0.344954 | 3.2:-73767421 | None:intergenic |
| AACCAGGATATGCTGCTAAC+AGG | 0.352861 | 3.2:+73766348 | MS.gene75567:intron |
| ACCTTCACAAAGCTTTCTTC+TGG | 0.383617 | 3.2:-73766513 | None:intergenic |
| TTCAGGTGTGTTTGATGTGT+TGG | 0.386152 | 3.2:+73767671 | MS.gene75567:intron |
| GAATGCAGTTTCACCATTTG+TGG | 0.390803 | 3.2:-73767762 | None:intergenic |
| TGTGGATTAGCAATCAGCTT+TGG | 0.412638 | 3.2:-73767744 | None:intergenic |
| CGAAGCAATCTGCCTCATAA+TGG | 0.420953 | 3.2:-73767522 | None:intergenic |
| TTCATCCAAGCATGGCAAAT+AGG | 0.430316 | 3.2:-73767552 | None:intergenic |
| TTTGTGAAGGTGAAGAAATA+TGG | 0.439428 | 3.2:+73766525 | MS.gene75567:CDS |
| TATCACCTATTTGCCATGCT+TGG | 0.458416 | 3.2:+73767547 | MS.gene75567:CDS |
| GCAATCGTTAGCGAGTTCTT+CGG | 0.465376 | 3.2:+73766236 | MS.gene75567:CDS |
| GGAAATCATGAGAGAGATAC+AGG | 0.478386 | 3.2:+73767499 | MS.gene75567:CDS |
| GCTGATTGCTAATCCACAAA+TGG | 0.506949 | 3.2:+73767749 | MS.gene75567:CDS |
| TCACTCTCAGTCCAAGTGAA+TGG | 0.507147 | 3.2:-73767720 | None:intergenic |
| AAAGACATAATCACTCTTCG+TGG | 0.509870 | 3.2:+73766206 | MS.gene75567:CDS |
| TGTCGAGAAGGGCGAGTCAA+GGG | 0.513652 | 3.2:+73767463 | MS.gene75567:CDS |
| GATAAACACCTCGATTGTAA+AGG | 0.522252 | 3.2:-73766491 | None:intergenic |
| GAGAGATACAGGCCATTATG+AGG | 0.523727 | 3.2:+73767510 | MS.gene75567:CDS |
| ATCATACAAGAACGACGAAT+GGG | 0.527471 | 3.2:+73767908 | MS.gene75567:CDS |
| TCCAGAAGAAAGCTTTGTGA+AGG | 0.536393 | 3.2:+73766512 | MS.gene75567:CDS |
| TTGTCGAGAAGGGCGAGTCA+AGG | 0.542198 | 3.2:+73767462 | MS.gene75567:CDS |
| TGATAACGAGGTTGTCGAGA+AGG | 0.548204 | 3.2:+73767451 | MS.gene75567:CDS |
| TTCAGCATCCTTTACAATCG+AGG | 0.552090 | 3.2:+73766483 | MS.gene75567:intron |
| AAATTGCACCTTGGTATCAA+AGG | 0.555107 | 3.2:-73767784 | None:intergenic |
| TGAAAAGAATGGCTTGAAGC+TGG | 0.556155 | 3.2:+73767347 | MS.gene75567:intron |
| ATGTGGAAGTTCCATTCACT+TGG | 0.563681 | 3.2:+73767709 | MS.gene75567:CDS |
| GATAACGAGGTTGTCGAGAA+GGG | 0.569913 | 3.2:+73767452 | MS.gene75567:CDS |
| GTTATAATGAGCAAGTCCAC+TGG | 0.576805 | 3.2:+73767392 | MS.gene75567:CDS |
| TATCATACAAGAACGACGAA+TGG | 0.597347 | 3.2:+73767907 | MS.gene75567:CDS |
| CCACTGGTGAAGTCCTTGAA+AGG | 0.598488 | 3.2:+73767408 | MS.gene75567:CDS |
| CAGCATTGAGACTGATAACG+AGG | 0.605364 | 3.2:+73767439 | MS.gene75567:CDS |
| CCTTTCAAGGACTTCACCAG+TGG | 0.608166 | 3.2:-73767408 | None:intergenic |
| CTGGTGAAGTCCTTGAAAGG+TGG | 0.608400 | 3.2:+73767411 | MS.gene75567:CDS |
| TTTGGTTATGCAGATTCACA+AGG | 0.610649 | 3.2:+73767872 | MS.gene75567:intron |
| CTTCAGTAAGCAACATCGGA+AGG | 0.612019 | 3.2:-73766548 | None:intergenic |
| ACTGCATTCCTTTGATACCA+AGG | 0.620090 | 3.2:+73767776 | MS.gene75567:CDS |
| TTGAAGCTGGCAAGTTACAG+AGG | 0.628270 | 3.2:+73767360 | MS.gene75567:CDS |
| GATGTTGCTTACTGAAGATG+AGG | 0.636613 | 3.2:+73766554 | MS.gene75567:CDS |
| GGCATATACTAACACAGATG+TGG | 0.641456 | 3.2:+73767692 | MS.gene75567:CDS |
| TCATCTTCAGTAAGCAACAT+CGG | 0.643466 | 3.2:-73766552 | None:intergenic |
| ATACAAGGTTCATCCAAGCA+TGG | 0.651912 | 3.2:-73767560 | None:intergenic |
| GTCAAGGGAGAAGAGTGACA+AGG | 0.685729 | 3.2:+73767478 | MS.gene75567:CDS |
| TGGACTTGCTCATTATAACA+AGG | 0.691125 | 3.2:-73767388 | None:intergenic |
| ATGTTGCTTACTGAAGATGA+GGG | 0.718973 | 3.2:+73766555 | MS.gene75567:CDS |
| TTAGTTACCAGAAAGCTGAG+CGG | 0.758740 | 3.2:-73766604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAATCTCAATATTA+TGG | - | chr3.2:73767225-73767244 | None:intergenic | 10.0% |
| !! | AATTGATAAAATTTAAGTGT+TGG | + | chr3.2:73766702-73766721 | MS.gene75567:intron | 15.0% |
| !! | ATTGATAAAATTTAAGTGTT+GGG | + | chr3.2:73766703-73766722 | MS.gene75567:intron | 15.0% |
| !!! | ATTTTAATAATGTTCTGTTA+TGG | + | chr3.2:73767235-73767254 | MS.gene75567:intron | 15.0% |
| !!! | TTTTTTTGTGATATCATTTT+AGG | + | chr3.2:73767032-73767051 | MS.gene75567:intron | 15.0% |
| !! | ACAAAGTAAATTGGTTATAA+AGG | - | chr3.2:73766675-73766694 | None:intergenic | 20.0% |
| !! | CAAAGTAAATTGGTTATAAA+GGG | - | chr3.2:73766674-73766693 | None:intergenic | 20.0% |
| !! | TAGCATAAAAAAATAATCAG+TGG | - | chr3.2:73766322-73766341 | None:intergenic | 20.0% |
| !! | TTATAGAAAGAAACAAAGTA+GGG | - | chr3.2:73766639-73766658 | None:intergenic | 20.0% |
| !! | TTTCTCTAAACAAAGTAAAT+TGG | - | chr3.2:73766684-73766703 | None:intergenic | 20.0% |
| !!! | AAGGGTTTTGTTTATTTTAT+TGG | + | chr3.2:73766453-73766472 | MS.gene75567:intron | 20.0% |
| !!! | ACATGTATACTTTTTTGTTA+TGG | + | chr3.2:73766924-73766943 | MS.gene75567:intron | 20.0% |
| !!! | AGGGTTTTGTTTATTTTATT+GGG | + | chr3.2:73766454-73766473 | MS.gene75567:intron | 20.0% |
| !!! | GCTATAAGTAATACTTATTT+TGG | + | chr3.2:73767854-73767873 | MS.gene75567:intron | 20.0% |
| !!! | TTGCTTATACTATTTTGTTA+TGG | + | chr3.2:73767140-73767159 | MS.gene75567:intron | 20.0% |
| !!! | TTGTTTATACTATTTTGTTG+TGG | + | chr3.2:73767087-73767106 | MS.gene75567:intron | 20.0% |
| !!! | TTTGTGATATTGATTAACAA+GGG | + | chr3.2:73766435-73766454 | MS.gene75567:intron | 20.0% |
| !!! | TTTTGTGATATTGATTAACA+AGG | + | chr3.2:73766434-73766453 | MS.gene75567:intron | 20.0% |
| ! | ATTCAAACAGTTTAATCATC+AGG | - | chr3.2:73767325-73767344 | None:intergenic | 25.0% |
| ! | CAGTCGATAAATAACAAAAT+TGG | - | chr3.2:73767817-73767836 | None:intergenic | 25.0% |
| ! | CATTTCATTTGACAAAATCA+CGG | + | chr3.2:73766753-73766772 | MS.gene75567:intron | 25.0% |
| ! | GTAGAAAAATGAGTGAAATT+GGG | - | chr3.2:73766286-73766305 | None:intergenic | 25.0% |
| ! | GTTATAAAGGGTTGTTAAAT+TGG | - | chr3.2:73766662-73766681 | None:intergenic | 25.0% |
| ! | GTTATAGAAAGAAACAAAGT+AGG | - | chr3.2:73766640-73766659 | None:intergenic | 25.0% |
| ! | TAAGTATTACTTATAGCCAA+AGG | - | chr3.2:73767851-73767870 | None:intergenic | 25.0% |
| ! | TAGAAAAATGAGTGAAATTG+GGG | - | chr3.2:73766285-73766304 | None:intergenic | 25.0% |
| ! | TGTAGAAAAATGAGTGAAAT+TGG | - | chr3.2:73766287-73766306 | None:intergenic | 25.0% |
| ! | TGTTTGAATGTTGAAAAGAA+TGG | + | chr3.2:73767336-73767355 | MS.gene75567:intron | 25.0% |
| !! | GTTTGATTCTCTTTGTTTAA+GGG | + | chr3.2:73766370-73766389 | MS.gene75567:intron | 25.0% |
| !! | TTTTATCTCCTAGTTGAATT+TGG | + | chr3.2:73767640-73767659 | MS.gene75567:intron | 25.0% |
| !!! | GTTTTTTTGTGATATCATTG+TGG | + | chr3.2:73767293-73767312 | MS.gene75567:intron | 25.0% |
| AAAGAAACAAAGTAGGGTTA+GGG | - | chr3.2:73766633-73766652 | None:intergenic | 30.0% | |
| AACAGTTTAATCATCAGGAA+CGG | - | chr3.2:73767320-73767339 | None:intergenic | 30.0% | |
| ACAAATAGCCAAATTCAACT+AGG | - | chr3.2:73767651-73767670 | None:intergenic | 30.0% | |
| ACTCACTCTCAAATTCAATT+AGG | - | chr3.2:73767272-73767291 | None:intergenic | 30.0% | |
| AGAAAAATGAGTGAAATTGG+GGG | - | chr3.2:73766284-73766303 | None:intergenic | 30.0% | |
| AGCGGTTAAATTGGTTATAA+AGG | - | chr3.2:73766589-73766608 | None:intergenic | 30.0% | |
| CTCAATATTATGGTTCACAA+TGG | - | chr3.2:73767215-73767234 | None:intergenic | 30.0% | |
| TAATTGAATTTGAGAGTGAG+TGG | + | chr3.2:73767271-73767290 | MS.gene75567:intron | 30.0% | |
| TGAATTTGGCTATTTGTTTC+AGG | + | chr3.2:73767654-73767673 | MS.gene75567:intron | 30.0% | |
| TTTGTGAAGGTGAAGAAATA+TGG | + | chr3.2:73766525-73766544 | MS.gene75567:CDS | 30.0% | |
| ! | GGTTTGATTCTCTTTGTTTA+AGG | + | chr3.2:73766369-73766388 | MS.gene75567:intron | 30.0% |
| ! | GTTGACTCAATAATTTGAGT+AGG | - | chr3.2:73767010-73767029 | None:intergenic | 30.0% |
| ! | TAGATTTTGCAAAGTCAATC+TGG | + | chr3.2:73766808-73766827 | MS.gene75567:intron | 30.0% |
| !! | TTGTTATTTATCGACTGACA+TGG | + | chr3.2:73767820-73767839 | MS.gene75567:intron | 30.0% |
| !!! | TTTTATGCTATTTTCGAACC+AGG | + | chr3.2:73766332-73766351 | MS.gene75567:intron | 30.0% |
| AAAGACATAATCACTCTTCG+TGG | + | chr3.2:73766206-73766225 | MS.gene75567:CDS | 35.0% | |
| AAATTGCACCTTGGTATCAA+AGG | - | chr3.2:73767787-73767806 | None:intergenic | 35.0% | |
| ACGAAGAGTGATTATGTCTT+TGG | - | chr3.2:73766207-73766226 | None:intergenic | 35.0% | |
| ATCATACAAGAACGACGAAT+GGG | + | chr3.2:73767908-73767927 | MS.gene75567:CDS | 35.0% | |
| GAAAGAAACAAAGTAGGGTT+AGG | - | chr3.2:73766634-73766653 | None:intergenic | 35.0% | |
| GATAAACACCTCGATTGTAA+AGG | - | chr3.2:73766494-73766513 | None:intergenic | 35.0% | |
| GCAAAAGTGAACATGTTTAC+AGG | - | chr3.2:73767124-73767143 | None:intergenic | 35.0% | |
| GTTTGTCAGAATCAGAATCA+CGG | - | chr3.2:73766838-73766857 | None:intergenic | 35.0% | |
| TAACCCAACTTACATGGATA+AGG | - | chr3.2:73766973-73766992 | None:intergenic | 35.0% | |
| TATCATACAAGAACGACGAA+TGG | + | chr3.2:73767907-73767926 | MS.gene75567:CDS | 35.0% | |
| TCATCTTCAGTAAGCAACAT+CGG | - | chr3.2:73766555-73766574 | None:intergenic | 35.0% | |
| TCTACATAACCCAACTTACA+TGG | - | chr3.2:73766979-73766998 | None:intergenic | 35.0% | |
| TTTGATACCAAGGTGCAATT+TGG | + | chr3.2:73767786-73767805 | MS.gene75567:intron | 35.0% | |
| TTTGGTTATGCAGATTCACA+AGG | + | chr3.2:73767872-73767891 | MS.gene75567:intron | 35.0% | |
| ! | AAGCCTTATCCATGTAAGTT+GGG | + | chr3.2:73766967-73766986 | MS.gene75567:intron | 35.0% |
| ! | ATGTTGCTTACTGAAGATGA+GGG | + | chr3.2:73766555-73766574 | MS.gene75567:CDS | 35.0% |
| ! | GAACTTTTAAGCCCATGATT+GGG | - | chr3.2:73766871-73766890 | None:intergenic | 35.0% |
| ! | TGAACTTTTAAGCCCATGAT+TGG | - | chr3.2:73766872-73766891 | None:intergenic | 35.0% |
| ! | TGGACTTGCTCATTATAACA+AGG | - | chr3.2:73767391-73767410 | None:intergenic | 35.0% |
| AATTTAACCGCTCAGCTTTC+TGG | + | chr3.2:73766597-73766616 | MS.gene75567:CDS | 40.0% | |
| ACCTTCACAAAGCTTTCTTC+TGG | - | chr3.2:73766516-73766535 | None:intergenic | 40.0% | |
| ACTCATAGTGAACCCAATCA+TGG | + | chr3.2:73766856-73766875 | MS.gene75567:intron | 40.0% | |
| ACTGCATTCCTTTGATACCA+AGG | + | chr3.2:73767776-73767795 | MS.gene75567:CDS | 40.0% | |
| AGAAAGCTGAGCGGTTAAAT+TGG | - | chr3.2:73766598-73766617 | None:intergenic | 40.0% | |
| ATACAAGGTTCATCCAAGCA+TGG | - | chr3.2:73767563-73767582 | None:intergenic | 40.0% | |
| ATCAAGAGTGACAGCATACA+AGG | - | chr3.2:73767578-73767597 | None:intergenic | 40.0% | |
| ATGTGGAAGTTCCATTCACT+TGG | + | chr3.2:73767709-73767728 | MS.gene75567:CDS | 40.0% | |
| CATGGATAAGGCTTGATTGT+TGG | - | chr3.2:73766961-73766980 | None:intergenic | 40.0% | |
| CTCATAGTGAACCCAATCAT+GGG | + | chr3.2:73766857-73766876 | MS.gene75567:intron | 40.0% | |
| GAATGCAGTTTCACCATTTG+TGG | - | chr3.2:73767765-73767784 | None:intergenic | 40.0% | |
| GACTGACATGGTTTATCCTT+TGG | + | chr3.2:73767832-73767851 | MS.gene75567:intron | 40.0% | |
| GCTGATTGCTAATCCACAAA+TGG | + | chr3.2:73767749-73767768 | MS.gene75567:CDS | 40.0% | |
| GGAAATCATGAGAGAGATAC+AGG | + | chr3.2:73767499-73767518 | MS.gene75567:CDS | 40.0% | |
| GGCATATACTAACACAGATG+TGG | + | chr3.2:73767692-73767711 | MS.gene75567:CDS | 40.0% | |
| GTTATAATGAGCAAGTCCAC+TGG | + | chr3.2:73767392-73767411 | MS.gene75567:CDS | 40.0% | |
| TATCACCTATTTGCCATGCT+TGG | + | chr3.2:73767547-73767566 | MS.gene75567:CDS | 40.0% | |
| TGAAAAGAATGGCTTGAAGC+TGG | + | chr3.2:73767347-73767366 | MS.gene75567:intron | 40.0% | |
| TGCTGAAATTCCACCTTTCA+AGG | - | chr3.2:73767424-73767443 | None:intergenic | 40.0% | |
| TTAGTTACCAGAAAGCTGAG+CGG | - | chr3.2:73766607-73766626 | None:intergenic | 40.0% | |
| TTCAGCATCCTTTACAATCG+AGG | + | chr3.2:73766483-73766502 | MS.gene75567:intron | 40.0% | |
| TTCAGGTGTGTTTGATGTGT+TGG | + | chr3.2:73767671-73767690 | MS.gene75567:intron | 40.0% | |
| TTCATCCAAGCATGGCAAAT+AGG | - | chr3.2:73767555-73767574 | None:intergenic | 40.0% | |
| ! | CAAGCCTTATCCATGTAAGT+TGG | + | chr3.2:73766966-73766985 | MS.gene75567:intron | 40.0% |
| ! | GAGAGTGAGTGATTTTTCTG+AGG | + | chr3.2:73767187-73767206 | MS.gene75567:intron | 40.0% |
| ! | GATGTTGCTTACTGAAGATG+AGG | + | chr3.2:73766554-73766573 | MS.gene75567:CDS | 40.0% |
| ! | TCCAGAAGAAAGCTTTGTGA+AGG | + | chr3.2:73766512-73766531 | MS.gene75567:CDS | 40.0% |
| !! | TGTGGATTAGCAATCAGCTT+TGG | - | chr3.2:73767747-73767766 | None:intergenic | 40.0% |
| AACCAGGATATGCTGCTAAC+AGG | + | chr3.2:73766348-73766367 | MS.gene75567:intron | 45.0% | |
| AACCTGTTAGCAGCATATCC+TGG | - | chr3.2:73766353-73766372 | None:intergenic | 45.0% | |
| CGAAGCAATCTGCCTCATAA+TGG | - | chr3.2:73767525-73767544 | None:intergenic | 45.0% | |
| CTTCAGTAAGCAACATCGGA+AGG | - | chr3.2:73766551-73766570 | None:intergenic | 45.0% | |
| GAGAGATACAGGCCATTATG+AGG | + | chr3.2:73767510-73767529 | MS.gene75567:CDS | 45.0% | |
| GATAACGAGGTTGTCGAGAA+GGG | + | chr3.2:73767452-73767471 | MS.gene75567:CDS | 45.0% | |
| GCAATCGTTAGCGAGTTCTT+CGG | + | chr3.2:73766236-73766255 | MS.gene75567:CDS | 45.0% | |
| GGTAAGTCCAAATTGCACCT+TGG | - | chr3.2:73767796-73767815 | None:intergenic | 45.0% | |
| TCACTCTCAGTCCAAGTGAA+TGG | - | chr3.2:73767723-73767742 | None:intergenic | 45.0% | |
| TTGAAGCTGGCAAGTTACAG+AGG | + | chr3.2:73767360-73767379 | MS.gene75567:CDS | 45.0% | |
| ! | CAGCATTGAGACTGATAACG+AGG | + | chr3.2:73767439-73767458 | MS.gene75567:CDS | 45.0% |
| ! | TGATAACGAGGTTGTCGAGA+AGG | + | chr3.2:73767451-73767470 | MS.gene75567:CDS | 45.0% |
| CCACTGGTGAAGTCCTTGAA+AGG | + | chr3.2:73767408-73767427 | MS.gene75567:CDS | 50.0% | |
| CCTTTCAAGGACTTCACCAG+TGG | - | chr3.2:73767411-73767430 | None:intergenic | 50.0% | |
| CTGGTGAAGTCCTTGAAAGG+TGG | + | chr3.2:73767411-73767430 | MS.gene75567:CDS | 50.0% | |
| GTCAAGGGAGAAGAGTGACA+AGG | + | chr3.2:73767478-73767497 | MS.gene75567:CDS | 50.0% | |
| TGTCGAGAAGGGCGAGTCAA+GGG | + | chr3.2:73767463-73767482 | MS.gene75567:CDS | 55.0% | |
| TTGTCGAGAAGGGCGAGTCA+AGG | + | chr3.2:73767462-73767481 | MS.gene75567:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 73766185 | 73767941 | 73766185 | ID=MS.gene75567 |
| chr3.2 | mRNA | 73766185 | 73767941 | 73766185 | ID=MS.gene75567.t1;Parent=MS.gene75567 |
| chr3.2 | exon | 73766185 | 73766257 | 73766185 | ID=MS.gene75567.t1.exon1;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73766185 | 73766257 | 73766185 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| chr3.2 | exon | 73766354 | 73766369 | 73766354 | ID=MS.gene75567.t1.exon2;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73766354 | 73766369 | 73766354 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| chr3.2 | exon | 73766488 | 73766618 | 73766488 | ID=MS.gene75567.t1.exon3;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73766488 | 73766618 | 73766488 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| chr3.2 | exon | 73767354 | 73767578 | 73767354 | ID=MS.gene75567.t1.exon4;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73767354 | 73767578 | 73767354 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| chr3.2 | exon | 73767676 | 73767797 | 73767676 | ID=MS.gene75567.t1.exon5;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73767676 | 73767797 | 73767676 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| chr3.2 | exon | 73767885 | 73767941 | 73767885 | ID=MS.gene75567.t1.exon6;Parent=MS.gene75567.t1 |
| chr3.2 | CDS | 73767885 | 73767941 | 73767885 | ID=cds.MS.gene75567.t1;Parent=MS.gene75567.t1 |
| Gene Sequence |
| Protein sequence |
