Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045227.t1 | XP_003601832.1 | 100 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.10E-110 | 408.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045227.t1 | Q9LU93 | 88.0 | 208 | 24 | 1 | 1 | 207 | 1 | 208 | 2.5e-99 | 362.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045227.t1 | G7J2H6 | 100.0 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 1.5e-110 | 408.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045227.t1 | MTR_3g085940 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 7.78e-155 | 427 |
| MS.gene045227.t1 | MTR_3g085940 | 100.000 | 155 | 0 | 0 | 53 | 207 | 1 | 155 | 1.41e-113 | 320 |
| MS.gene045227.t1 | MTR_3g085940 | 96.753 | 154 | 5 | 0 | 1 | 154 | 1 | 154 | 7.38e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045227.t1 | AT3G25980 | 87.981 | 208 | 24 | 1 | 1 | 207 | 1 | 208 | 1.41e-136 | 381 |
| MS.gene045227.t1 | AT3G25980 | 85.577 | 208 | 25 | 2 | 1 | 207 | 1 | 204 | 1.48e-130 | 365 |
| MS.gene045227.t1 | AT3G25980 | 87.742 | 155 | 19 | 0 | 53 | 207 | 1 | 155 | 2.29e-101 | 290 |
| MS.gene045227.t1 | AT3G25980 | 87.742 | 155 | 19 | 0 | 53 | 207 | 1 | 155 | 2.29e-101 | 290 |
Find 49 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTAACCGCTCAGCTTTC+TGG | 0.243002 | 3.3:+71679232 | MS.gene045227:CDS |
| ACGAAGAGTGATTATGTCTT+TGG | 0.305082 | 3.3:-71678836 | None:intergenic |
| AGCGGTTAAATTGGTTATAA+AGG | 0.310452 | 3.3:-71679221 | None:intergenic |
| AGAAAGCTGAGCGGTTAAAT+TGG | 0.334716 | 3.3:-71679230 | None:intergenic |
| TGCTGAAATTCCACCTTTCA+AGG | 0.344954 | 3.3:-71680056 | None:intergenic |
| AACCAGGATATGCTGCTAAC+AGG | 0.352861 | 3.3:+71678983 | MS.gene045227:intron |
| ACCTTCACAAAGCTTTCTTC+TGG | 0.383617 | 3.3:-71679148 | None:intergenic |
| TTCAGGTGTGTTTGATGTGT+TGG | 0.386152 | 3.3:+71680307 | MS.gene045227:intron |
| GAATGCAGTTTCACCATTTG+TGG | 0.390803 | 3.3:-71680398 | None:intergenic |
| TGTGGATTAGCAATCAGCTT+TGG | 0.412638 | 3.3:-71680380 | None:intergenic |
| CGAAGCAATCTGCCTCATAA+TGG | 0.420953 | 3.3:-71680157 | None:intergenic |
| TTCATCCAAGCATGGCAAAT+AGG | 0.430316 | 3.3:-71680187 | None:intergenic |
| ACTGCATTCCTTTGATACTA+AGG | 0.432948 | 3.3:+71680412 | MS.gene045227:CDS |
| TTTGTGAAGGTGAAGAAATA+TGG | 0.439428 | 3.3:+71679160 | MS.gene045227:CDS |
| TATCACCTATTTGCCATGCT+TGG | 0.458416 | 3.3:+71680182 | MS.gene045227:CDS |
| GCAATCGTTAGCGAGTTCTT+CGG | 0.465376 | 3.3:+71678868 | MS.gene045227:CDS |
| GGAAATCATGAGAGAGATAC+AGG | 0.478386 | 3.3:+71680134 | MS.gene045227:CDS |
| GCTGATTGCTAATCCACAAA+TGG | 0.506949 | 3.3:+71680385 | MS.gene045227:CDS |
| TCACTCTCAGTCCAAGTGAA+TGG | 0.507147 | 3.3:-71680356 | None:intergenic |
| AAAGACATAATCACTCTTCG+TGG | 0.509870 | 3.3:+71678838 | MS.gene045227:CDS |
| TGTCGAGAAGGGCGAGTCAA+GGG | 0.513652 | 3.3:+71680098 | MS.gene045227:CDS |
| GATAAACACCTCGATTGTAA+AGG | 0.522252 | 3.3:-71679126 | None:intergenic |
| GAGAGATACAGGCCATTATG+AGG | 0.523727 | 3.3:+71680145 | MS.gene045227:CDS |
| ATCATACAAGAACGACGAAT+GGG | 0.527471 | 3.3:+71680544 | MS.gene045227:CDS |
| TCCAGAAGAAAGCTTTGTGA+AGG | 0.536393 | 3.3:+71679147 | MS.gene045227:CDS |
| TTGTCGAGAAGGGCGAGTCA+AGG | 0.542198 | 3.3:+71680097 | MS.gene045227:CDS |
| TGATAACGAGGTTGTCGAGA+AGG | 0.548204 | 3.3:+71680086 | MS.gene045227:CDS |
| TTCAGCATCCTTTACAATCG+AGG | 0.552090 | 3.3:+71679118 | MS.gene045227:intron |
| TGAAAAGAATGGCTTGAAGC+TGG | 0.556155 | 3.3:+71679982 | MS.gene045227:intron |
| ATGTGGAAGTTCCATTCACT+TGG | 0.563681 | 3.3:+71680345 | MS.gene045227:CDS |
| AAATTGCACCTTAGTATCAA+AGG | 0.565710 | 3.3:-71680420 | None:intergenic |
| GATAACGAGGTTGTCGAGAA+GGG | 0.569913 | 3.3:+71680087 | MS.gene045227:CDS |
| GTTATAATGAGCAAGTCCAC+TGG | 0.576805 | 3.3:+71680027 | MS.gene045227:CDS |
| TATCATACAAGAACGACGAA+TGG | 0.597347 | 3.3:+71680543 | MS.gene045227:CDS |
| CCACTGGTGAAGTCCTTGAA+AGG | 0.598488 | 3.3:+71680043 | MS.gene045227:CDS |
| CAGCATTGAGACTGATAACG+AGG | 0.605364 | 3.3:+71680074 | MS.gene045227:CDS |
| CCTTTCAAGGACTTCACCAG+TGG | 0.608166 | 3.3:-71680043 | None:intergenic |
| CTGGTGAAGTCCTTGAAAGG+TGG | 0.608400 | 3.3:+71680046 | MS.gene045227:CDS |
| TTTGGTTATGCAGATTCACA+AGG | 0.610649 | 3.3:+71680508 | MS.gene045227:intron |
| CTTCAGTAAGCAACATCGGA+AGG | 0.612019 | 3.3:-71679183 | None:intergenic |
| TTGAAGCTGGCAAGTTACAG+AGG | 0.628270 | 3.3:+71679995 | MS.gene045227:CDS |
| GATGTTGCTTACTGAAGATG+AGG | 0.636613 | 3.3:+71679189 | MS.gene045227:CDS |
| GGCATATACTAACACAGATG+TGG | 0.641456 | 3.3:+71680328 | MS.gene045227:CDS |
| TCATCTTCAGTAAGCAACAT+CGG | 0.643466 | 3.3:-71679187 | None:intergenic |
| ATACAAGGTTCATCCAAGCA+TGG | 0.651912 | 3.3:-71680195 | None:intergenic |
| GTCAAGGGAGAAGAGTGACA+AGG | 0.685729 | 3.3:+71680113 | MS.gene045227:CDS |
| TGGACTTGCTCATTATAACA+AGG | 0.691125 | 3.3:-71680023 | None:intergenic |
| ATGTTGCTTACTGAAGATGA+GGG | 0.718973 | 3.3:+71679190 | MS.gene045227:CDS |
| TTAGTTACCAGAAAGCTGAG+CGG | 0.758740 | 3.3:-71679239 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAATCTCAATATTA+TGG | - | chr3.3:71679860-71679879 | None:intergenic | 10.0% |
| !! | AATTGATAAAATTTAAGTGT+TGG | + | chr3.3:71679337-71679356 | MS.gene045227:intron | 15.0% |
| !! | ATTGATAAAATTTAAGTGTT+GGG | + | chr3.3:71679338-71679357 | MS.gene045227:intron | 15.0% |
| !!! | ATTTTAATAATGTTCTGTTA+TGG | + | chr3.3:71679870-71679889 | MS.gene045227:intron | 15.0% |
| !!! | TTTTTTTGTGATATCATTTT+AGG | + | chr3.3:71679667-71679686 | MS.gene045227:intron | 15.0% |
| !! | ACAAAGTAAATTGGTTATAA+AGG | - | chr3.3:71679310-71679329 | None:intergenic | 20.0% |
| !! | CAAAGTAAATTGGTTATAAA+GGG | - | chr3.3:71679309-71679328 | None:intergenic | 20.0% |
| !! | TTATAGAAAGAAACAAAGTA+GGG | - | chr3.3:71679274-71679293 | None:intergenic | 20.0% |
| !! | TTTCTCTAAACAAAGTAAAT+TGG | - | chr3.3:71679319-71679338 | None:intergenic | 20.0% |
| !!! | AAGGGTTTTGTTTATTTTAT+TGG | + | chr3.3:71679088-71679107 | MS.gene045227:intron | 20.0% |
| !!! | ACATGTATACTTTTTTGTTA+TGG | + | chr3.3:71679559-71679578 | MS.gene045227:intron | 20.0% |
| !!! | AGGGTTTTGTTTATTTTATT+GGG | + | chr3.3:71679089-71679108 | MS.gene045227:intron | 20.0% |
| !!! | GCTATAAGTAATACTTATTT+TGG | + | chr3.3:71680490-71680509 | MS.gene045227:intron | 20.0% |
| !!! | TTGCTTATACTATTTTGTTA+TGG | + | chr3.3:71679775-71679794 | MS.gene045227:intron | 20.0% |
| !!! | TTGTTTATACTATTTTGTTG+TGG | + | chr3.3:71679722-71679741 | MS.gene045227:intron | 20.0% |
| !!! | TTTGTGATATTGATTAACAA+GGG | + | chr3.3:71679070-71679089 | MS.gene045227:intron | 20.0% |
| !!! | TTTTGTGATATTGATTAACA+AGG | + | chr3.3:71679069-71679088 | MS.gene045227:intron | 20.0% |
| ! | ATTCAAACAGTTTAATCATC+AGG | - | chr3.3:71679960-71679979 | None:intergenic | 25.0% |
| ! | CAGTCGATAAATAACAAAAT+TGG | - | chr3.3:71680453-71680472 | None:intergenic | 25.0% |
| ! | CATTTCATTTGACAAAATCA+CGG | + | chr3.3:71679388-71679407 | MS.gene045227:intron | 25.0% |
| ! | GTAGAAAAATGAGTGAAATT+GGG | - | chr3.3:71678921-71678940 | None:intergenic | 25.0% |
| ! | GTTATAAAGGGTTGTTAAAT+TGG | - | chr3.3:71679297-71679316 | None:intergenic | 25.0% |
| ! | GTTATAGAAAGAAACAAAGT+AGG | - | chr3.3:71679275-71679294 | None:intergenic | 25.0% |
| ! | TAAGTATTACTTATAGCCAA+AGG | - | chr3.3:71680487-71680506 | None:intergenic | 25.0% |
| ! | TAGAAAAATGAGTGAAATTG+GGG | - | chr3.3:71678920-71678939 | None:intergenic | 25.0% |
| ! | TAGCACAAAAAAATAATCAG+TGG | - | chr3.3:71678957-71678976 | None:intergenic | 25.0% |
| ! | TGTAGAAAAATGAGTGAAAT+TGG | - | chr3.3:71678922-71678941 | None:intergenic | 25.0% |
| ! | TGTTTGAATGTTGAAAAGAA+TGG | + | chr3.3:71679971-71679990 | MS.gene045227:intron | 25.0% |
| !! | GTTTGATTCTCTTTGTTTAA+GGG | + | chr3.3:71679005-71679024 | MS.gene045227:intron | 25.0% |
| !! | TTTTATCTCCTAGTTGAATT+TGG | + | chr3.3:71680276-71680295 | MS.gene045227:intron | 25.0% |
| !!! | GTTTTTTTGTGATATCATTG+TGG | + | chr3.3:71679928-71679947 | MS.gene045227:intron | 25.0% |
| AAAGAAACAAAGTAGGGTTA+GGG | - | chr3.3:71679268-71679287 | None:intergenic | 30.0% | |
| AAATTGCACCTTAGTATCAA+AGG | - | chr3.3:71680423-71680442 | None:intergenic | 30.0% | |
| AACAGTTTAATCATCAGGAA+CGG | - | chr3.3:71679955-71679974 | None:intergenic | 30.0% | |
| ACAAATAGCCAAATTCAACT+AGG | - | chr3.3:71680287-71680306 | None:intergenic | 30.0% | |
| ACTCACTCTCAAATTCAATT+AGG | - | chr3.3:71679907-71679926 | None:intergenic | 30.0% | |
| AGAAAAATGAGTGAAATTGG+GGG | - | chr3.3:71678919-71678938 | None:intergenic | 30.0% | |
| AGCGGTTAAATTGGTTATAA+AGG | - | chr3.3:71679224-71679243 | None:intergenic | 30.0% | |
| CTCAATATTATGGTTCACAA+TGG | - | chr3.3:71679850-71679869 | None:intergenic | 30.0% | |
| TAATTGAATTTGAGAGTGAG+TGG | + | chr3.3:71679906-71679925 | MS.gene045227:intron | 30.0% | |
| TGAATTTGGCTATTTGTTTC+AGG | + | chr3.3:71680290-71680309 | MS.gene045227:intron | 30.0% | |
| TTTGATACTAAGGTGCAATT+TGG | + | chr3.3:71680422-71680441 | MS.gene045227:intron | 30.0% | |
| TTTGTGAAGGTGAAGAAATA+TGG | + | chr3.3:71679160-71679179 | MS.gene045227:CDS | 30.0% | |
| ! | GGTTTGATTCTCTTTGTTTA+AGG | + | chr3.3:71679004-71679023 | MS.gene045227:intron | 30.0% |
| ! | GTTGACTCAATAATTTGAGT+AGG | - | chr3.3:71679645-71679664 | None:intergenic | 30.0% |
| ! | TAGATTTTGCAAAGTCAATC+TGG | + | chr3.3:71679443-71679462 | MS.gene045227:intron | 30.0% |
| !! | TTGTTATTTATCGACTGACA+TGG | + | chr3.3:71680456-71680475 | MS.gene045227:intron | 30.0% |
| AAAGACATAATCACTCTTCG+TGG | + | chr3.3:71678838-71678857 | MS.gene045227:CDS | 35.0% | |
| ACGAAGAGTGATTATGTCTT+TGG | - | chr3.3:71678839-71678858 | None:intergenic | 35.0% | |
| ACTGCATTCCTTTGATACTA+AGG | + | chr3.3:71680412-71680431 | MS.gene045227:CDS | 35.0% | |
| ATCATACAAGAACGACGAAT+GGG | + | chr3.3:71680544-71680563 | MS.gene045227:CDS | 35.0% | |
| GAAAGAAACAAAGTAGGGTT+AGG | - | chr3.3:71679269-71679288 | None:intergenic | 35.0% | |
| GATAAACACCTCGATTGTAA+AGG | - | chr3.3:71679129-71679148 | None:intergenic | 35.0% | |
| GCAAAAGTGAACATGTTTAC+AGG | - | chr3.3:71679759-71679778 | None:intergenic | 35.0% | |
| GTTTGTCAGAATCAGAATCA+CGG | - | chr3.3:71679473-71679492 | None:intergenic | 35.0% | |
| TAACCCAACTTACATGGATA+AGG | - | chr3.3:71679608-71679627 | None:intergenic | 35.0% | |
| TATCATACAAGAACGACGAA+TGG | + | chr3.3:71680543-71680562 | MS.gene045227:CDS | 35.0% | |
| TCATCTTCAGTAAGCAACAT+CGG | - | chr3.3:71679190-71679209 | None:intergenic | 35.0% | |
| TCTACATAACCCAACTTACA+TGG | - | chr3.3:71679614-71679633 | None:intergenic | 35.0% | |
| TTTGGTTATGCAGATTCACA+AGG | + | chr3.3:71680508-71680527 | MS.gene045227:intron | 35.0% | |
| ! | AAGCCTTATCCATGTAAGTT+GGG | + | chr3.3:71679602-71679621 | MS.gene045227:intron | 35.0% |
| ! | ATGTTGCTTACTGAAGATGA+GGG | + | chr3.3:71679190-71679209 | MS.gene045227:CDS | 35.0% |
| ! | GAACTTTTAAGCCCATGATT+GGG | - | chr3.3:71679506-71679525 | None:intergenic | 35.0% |
| ! | TGAACTTTTAAGCCCATGAT+TGG | - | chr3.3:71679507-71679526 | None:intergenic | 35.0% |
| ! | TGGACTTGCTCATTATAACA+AGG | - | chr3.3:71680026-71680045 | None:intergenic | 35.0% |
| !!! | TTTTGTGCTATTTTCGAACC+AGG | + | chr3.3:71678967-71678986 | MS.gene045227:intron | 35.0% |
| AATTTAACCGCTCAGCTTTC+TGG | + | chr3.3:71679232-71679251 | MS.gene045227:CDS | 40.0% | |
| ACCTTCACAAAGCTTTCTTC+TGG | - | chr3.3:71679151-71679170 | None:intergenic | 40.0% | |
| ACTCATAGTGAACCCAATCA+TGG | + | chr3.3:71679491-71679510 | MS.gene045227:intron | 40.0% | |
| AGAAAGCTGAGCGGTTAAAT+TGG | - | chr3.3:71679233-71679252 | None:intergenic | 40.0% | |
| ATACAAGGTTCATCCAAGCA+TGG | - | chr3.3:71680198-71680217 | None:intergenic | 40.0% | |
| ATGTGGAAGTTCCATTCACT+TGG | + | chr3.3:71680345-71680364 | MS.gene045227:CDS | 40.0% | |
| CATGGATAAGGCTTGATTGT+TGG | - | chr3.3:71679596-71679615 | None:intergenic | 40.0% | |
| CTCATAGTGAACCCAATCAT+GGG | + | chr3.3:71679492-71679511 | MS.gene045227:intron | 40.0% | |
| GAATGCAGTTTCACCATTTG+TGG | - | chr3.3:71680401-71680420 | None:intergenic | 40.0% | |
| GACTGACATGGTTTATCCTT+TGG | + | chr3.3:71680468-71680487 | MS.gene045227:intron | 40.0% | |
| GCTGATTGCTAATCCACAAA+TGG | + | chr3.3:71680385-71680404 | MS.gene045227:CDS | 40.0% | |
| GGAAATCATGAGAGAGATAC+AGG | + | chr3.3:71680134-71680153 | MS.gene045227:CDS | 40.0% | |
| GGCATATACTAACACAGATG+TGG | + | chr3.3:71680328-71680347 | MS.gene045227:CDS | 40.0% | |
| GTTATAATGAGCAAGTCCAC+TGG | + | chr3.3:71680027-71680046 | MS.gene045227:CDS | 40.0% | |
| TATCACCTATTTGCCATGCT+TGG | + | chr3.3:71680182-71680201 | MS.gene045227:CDS | 40.0% | |
| TCAAAGAGTGACAGCATACA+AGG | - | chr3.3:71680213-71680232 | None:intergenic | 40.0% | |
| TGAAAAGAATGGCTTGAAGC+TGG | + | chr3.3:71679982-71680001 | MS.gene045227:intron | 40.0% | |
| TGCTGAAATTCCACCTTTCA+AGG | - | chr3.3:71680059-71680078 | None:intergenic | 40.0% | |
| TTAGTTACCAGAAAGCTGAG+CGG | - | chr3.3:71679242-71679261 | None:intergenic | 40.0% | |
| TTCAGCATCCTTTACAATCG+AGG | + | chr3.3:71679118-71679137 | MS.gene045227:intron | 40.0% | |
| TTCAGGTGTGTTTGATGTGT+TGG | + | chr3.3:71680307-71680326 | MS.gene045227:intron | 40.0% | |
| TTCATCCAAGCATGGCAAAT+AGG | - | chr3.3:71680190-71680209 | None:intergenic | 40.0% | |
| ! | CAAGCCTTATCCATGTAAGT+TGG | + | chr3.3:71679601-71679620 | MS.gene045227:intron | 40.0% |
| ! | GAGAGTGAGTGATTTTTCTG+AGG | + | chr3.3:71679822-71679841 | MS.gene045227:intron | 40.0% |
| ! | GATGTTGCTTACTGAAGATG+AGG | + | chr3.3:71679189-71679208 | MS.gene045227:CDS | 40.0% |
| ! | TCCAGAAGAAAGCTTTGTGA+AGG | + | chr3.3:71679147-71679166 | MS.gene045227:CDS | 40.0% |
| !! | TGTGGATTAGCAATCAGCTT+TGG | - | chr3.3:71680383-71680402 | None:intergenic | 40.0% |
| AACCAGGATATGCTGCTAAC+AGG | + | chr3.3:71678983-71679002 | MS.gene045227:intron | 45.0% | |
| AACCTGTTAGCAGCATATCC+TGG | - | chr3.3:71678988-71679007 | None:intergenic | 45.0% | |
| CGAAGCAATCTGCCTCATAA+TGG | - | chr3.3:71680160-71680179 | None:intergenic | 45.0% | |
| CTTCAGTAAGCAACATCGGA+AGG | - | chr3.3:71679186-71679205 | None:intergenic | 45.0% | |
| GAGAGATACAGGCCATTATG+AGG | + | chr3.3:71680145-71680164 | MS.gene045227:CDS | 45.0% | |
| GATAACGAGGTTGTCGAGAA+GGG | + | chr3.3:71680087-71680106 | MS.gene045227:CDS | 45.0% | |
| GCAATCGTTAGCGAGTTCTT+CGG | + | chr3.3:71678868-71678887 | MS.gene045227:CDS | 45.0% | |
| TCACTCTCAGTCCAAGTGAA+TGG | - | chr3.3:71680359-71680378 | None:intergenic | 45.0% | |
| TTGAAGCTGGCAAGTTACAG+AGG | + | chr3.3:71679995-71680014 | MS.gene045227:CDS | 45.0% | |
| ! | CAGCATTGAGACTGATAACG+AGG | + | chr3.3:71680074-71680093 | MS.gene045227:CDS | 45.0% |
| ! | TGATAACGAGGTTGTCGAGA+AGG | + | chr3.3:71680086-71680105 | MS.gene045227:CDS | 45.0% |
| CCACTGGTGAAGTCCTTGAA+AGG | + | chr3.3:71680043-71680062 | MS.gene045227:CDS | 50.0% | |
| CCTTTCAAGGACTTCACCAG+TGG | - | chr3.3:71680046-71680065 | None:intergenic | 50.0% | |
| CTGGTGAAGTCCTTGAAAGG+TGG | + | chr3.3:71680046-71680065 | MS.gene045227:CDS | 50.0% | |
| GTCAAGGGAGAAGAGTGACA+AGG | + | chr3.3:71680113-71680132 | MS.gene045227:CDS | 50.0% | |
| TGTCGAGAAGGGCGAGTCAA+GGG | + | chr3.3:71680098-71680117 | MS.gene045227:CDS | 55.0% | |
| TTGTCGAGAAGGGCGAGTCA+AGG | + | chr3.3:71680097-71680116 | MS.gene045227:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 71678817 | 71680577 | 71678817 | ID=MS.gene045227 |
| chr3.3 | mRNA | 71678817 | 71680577 | 71678817 | ID=MS.gene045227.t1;Parent=MS.gene045227 |
| chr3.3 | exon | 71678817 | 71678889 | 71678817 | ID=MS.gene045227.t1.exon1;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71678817 | 71678889 | 71678817 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| chr3.3 | exon | 71678989 | 71679004 | 71678989 | ID=MS.gene045227.t1.exon2;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71678989 | 71679004 | 71678989 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| chr3.3 | exon | 71679123 | 71679253 | 71679123 | ID=MS.gene045227.t1.exon3;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71679123 | 71679253 | 71679123 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| chr3.3 | exon | 71679989 | 71680213 | 71679989 | ID=MS.gene045227.t1.exon4;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71679989 | 71680213 | 71679989 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| chr3.3 | exon | 71680312 | 71680433 | 71680312 | ID=MS.gene045227.t1.exon5;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71680312 | 71680433 | 71680312 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| chr3.3 | exon | 71680521 | 71680577 | 71680521 | ID=MS.gene045227.t1.exon6;Parent=MS.gene045227.t1 |
| chr3.3 | CDS | 71680521 | 71680577 | 71680521 | ID=cds.MS.gene045227.t1;Parent=MS.gene045227.t1 |
| Gene Sequence |
| Protein sequence |
