AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008988


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008988.t1 MTR_8g066975 97.643 297 7 0 1 297 1 297 0.0 583
MS.gene008988.t1 MTR_5g030530 84.848 297 45 0 1 297 1 297 0.0 520
MS.gene008988.t1 MTR_4g012850 36.332 289 166 6 6 291 14 287 1.90e-46 158
MS.gene008988.t1 MTR_4g088545 34.516 310 181 9 1 297 1 301 4.32e-44 152
MS.gene008988.t1 MTR_2g102010 34.333 300 178 6 1 296 10 294 2.67e-43 150
MS.gene008988.t1 MTR_2g436930 29.781 319 183 9 9 296 16 324 7.38e-35 129
MS.gene008988.t1 MTR_4g088545 34.241 257 150 7 1 245 1 250 2.16e-33 123
MS.gene008988.t1 MTR_4g088545 27.461 193 128 4 106 293 10 195 2.03e-14 72.0
MS.gene008988.t1 MTR_5g009500 31.447 318 182 7 4 297 34 339 4.27e-33 124
MS.gene008988.t1 MTR_5g009500 29.412 204 128 4 100 296 30 224 4.47e-14 72.0
MS.gene008988.t1 MTR_4g119770 27.864 323 190 8 7 296 13 325 2.75e-31 119
MS.gene008988.t1 MTR_8g027975 30.745 322 185 8 2 297 45 354 5.04e-31 119
MS.gene008988.t1 MTR_7g109135 31.769 277 177 6 24 296 38 306 2.53e-29 114
MS.gene008988.t1 MTR_7g109135 32.738 168 106 2 111 276 25 187 4.99e-17 80.1
MS.gene008988.t1 MTR_4g088545 33.636 220 133 6 1 214 1 213 3.30e-28 109
MS.gene008988.t1 MTR_4g088545 27.461 193 128 4 106 293 10 195 8.00e-15 72.8
MS.gene008988.t1 MTR_3g025800 30.000 320 187 12 4 297 24 332 6.43e-28 110
MS.gene008988.t1 MTR_3g025800 27.727 220 121 6 101 295 21 227 1.26e-13 70.9
MS.gene008988.t1 MTR_1g087840 30.686 277 180 6 24 296 35 303 3.36e-27 108
MS.gene008988.t1 MTR_5g055410 30.851 282 173 9 24 296 37 305 4.46e-27 108
MS.gene008988.t1 MTR_5g055410 26.882 186 109 7 23 197 134 303 7.05e-12 65.5
MS.gene008988.t1 MTR_7g109135 32.203 236 148 6 65 296 1 228 1.19e-24 99.8
MS.gene008988.t1 MTR_7g109135 30.325 277 174 6 24 296 38 299 3.84e-24 99.8
MS.gene008988.t1 MTR_7g109135 30.357 168 103 3 111 276 25 180 3.41e-13 69.3
MS.gene008988.t1 MTR_1g090330 27.076 277 191 6 24 297 30 298 7.15e-24 99.0
MS.gene008988.t1 MTR_1g090330 27.128 188 130 3 11 197 114 295 1.22e-15 76.3
MS.gene008988.t1 MTR_3g104600 28.758 306 196 7 6 297 33 330 3.14e-23 97.8
MS.gene008988.t1 MTR_6g034515 30.249 281 168 6 23 296 82 341 3.54e-23 98.2
MS.gene008988.t1 MTR_7g109135 33.019 212 130 6 89 296 4 207 2.16e-21 90.5
MS.gene008988.t1 MTR_2g436930 28.395 243 142 7 76 296 2 234 4.03e-21 90.1
MS.gene008988.t1 MTR_2g436930 26.263 198 123 6 10 193 40 228 6.10e-13 67.4
MS.gene008988.t1 MTR_8g098240 28.866 291 180 8 10 297 322 588 4.13e-21 93.6
MS.gene008988.t1 MTR_5g073040 31.000 300 168 12 8 294 39 312 6.85e-21 91.3
MS.gene008988.t1 MTR_5g073040 27.451 204 127 9 96 297 29 213 3.76e-11 63.2
MS.gene008988.t1 MTR_4g114320 24.232 293 201 4 6 296 121 394 7.23e-21 92.0
MS.gene008988.t1 MTR_6g091800 25.333 300 207 6 5 296 16 306 1.02e-20 90.5
MS.gene008988.t1 MTR_8g076760 26.552 290 172 11 23 290 29 299 1.11e-20 90.5
MS.gene008988.t1 MTR_8g076760 29.648 199 119 7 8 195 113 301 1.57e-15 75.9
MS.gene008988.t1 MTR_8g076760 30.857 175 111 5 124 296 30 196 4.64e-12 65.9
MS.gene008988.t1 MTR_7g084400 27.797 295 185 7 8 296 213 485 1.44e-20 91.7
MS.gene008988.t1 MTR_7g084400 26.633 199 130 2 99 294 204 389 6.43e-11 63.2
MS.gene008988.t1 MTR_4g018750 29.808 208 130 4 1 206 110 303 2.96e-20 89.0
MS.gene008988.t1 MTR_4g018750 28.929 280 173 10 24 293 31 294 3.11e-19 86.3
MS.gene008988.t1 MTR_4g018750 27.861 201 139 3 100 296 7 205 4.07e-16 77.4
MS.gene008988.t1 MTR_1g012030 25.170 294 197 6 6 296 137 410 3.68e-20 90.1
MS.gene008988.t1 MTR_4g057850 28.571 287 178 10 10 286 24 293 6.34e-20 88.2
MS.gene008988.t1 MTR_4g057850 30.556 180 114 4 19 195 128 299 5.55e-15 74.3
MS.gene008988.t1 MTR_3g107510 24.830 294 198 6 6 296 120 393 8.10e-20 89.0
MS.gene008988.t1 MTR_4g119770 26.848 257 155 6 7 240 13 259 1.36e-19 86.7
MS.gene008988.t1 MTR_4g119770 29.688 192 119 6 111 290 17 204 9.00e-13 67.4
MS.gene008988.t1 MTR_3g104500 26.159 302 203 11 2 293 28 319 2.14e-19 87.0
MS.gene008988.t1 MTR_3g462140 29.856 278 174 7 24 293 31 295 2.17e-19 86.7
MS.gene008988.t1 MTR_3g462140 30.601 183 114 2 19 201 131 300 1.25e-18 84.3
MS.gene008988.t1 MTR_3g462140 30.693 202 131 5 101 296 8 206 2.15e-17 80.9
MS.gene008988.t1 MTR_7g066690 29.329 283 168 11 24 293 33 296 3.45e-19 86.3
MS.gene008988.t1 MTR_7g066690 27.835 194 127 2 4 197 117 297 3.72e-18 83.2
MS.gene008988.t1 MTR_7g066690 27.461 193 134 3 108 296 17 207 2.87e-15 75.1
MS.gene008988.t1 MTR_3g098460 27.759 299 189 8 5 296 202 480 3.74e-19 87.8
MS.gene008988.t1 MTR_8g096050 26.370 292 192 6 10 296 229 502 2.77e-17 82.0
MS.gene008988.t1 MTR_8g096050 28.283 198 120 7 8 199 321 502 1.46e-13 71.2
MS.gene008988.t1 MTR_5g081910 25.890 309 194 8 20 297 20 324 3.00e-17 81.3
MS.gene008988.t1 MTR_6g091800 23.457 324 207 6 5 296 16 330 4.54e-17 80.5
MS.gene008988.t1 MTR_4g018750 27.861 201 139 3 100 296 7 205 4.35e-16 77.0
MS.gene008988.t1 MTR_4g018750 30.769 143 97 1 1 141 110 252 2.13e-14 72.4
MS.gene008988.t1 MTR_4g018750 28.279 244 149 10 24 257 31 258 6.42e-13 68.2
MS.gene008988.t1 MTR_6g091800 26.141 241 164 5 5 240 16 247 5.70e-16 76.6
MS.gene008988.t1 MTR_6g091800 26.141 241 164 5 5 240 16 247 8.06e-16 76.3
MS.gene008988.t1 MTR_1g097890 27.341 267 153 8 10 273 53 281 3.96e-15 74.7
MS.gene008988.t1 MTR_1g097890 32.973 185 94 4 109 293 52 206 4.99e-15 74.3
MS.gene008988.t1 MTR_1g097890 32.124 193 112 5 8 200 132 305 1.61e-13 70.1
MS.gene008988.t1 MTR_6g034145 24.506 253 179 5 52 296 4 252 4.15e-15 73.9
MS.gene008988.t1 MTR_8g092080 28.826 281 149 10 3 273 43 282 6.52e-15 74.3
MS.gene008988.t1 MTR_8g092080 31.646 158 96 4 142 293 56 207 1.03e-12 67.8
MS.gene008988.t1 MTR_7g068340 25.448 279 179 8 24 297 103 357 7.29e-15 74.7
MS.gene008988.t1 MTR_1g088995 27.425 299 193 8 4 297 29 308 4.10e-14 71.6
MS.gene008988.t1 MTR_6g091800 23.077 299 189 6 5 271 16 305 4.58e-14 71.6
MS.gene008988.t1 MTR_5g081150 25.325 308 204 6 1 296 28 321 7.12e-14 71.2
MS.gene008988.t1 MTR_5g081150 31.188 202 124 5 3 200 132 322 1.92e-11 63.9
MS.gene008988.t1 MTR_5g081910 28.302 212 128 5 108 297 41 250 8.58e-14 70.1
MS.gene008988.t1 MTR_7g015870 27.241 290 174 13 23 293 40 311 1.34e-13 70.5
MS.gene008988.t1 MTR_7g015870 29.902 204 127 6 92 289 9 202 1.09e-12 67.8
MS.gene008988.t1 MTR_7g064980 27.835 194 129 4 3 196 129 311 2.59e-13 69.7
MS.gene008988.t1 MTR_7g064980 25.243 309 205 9 1 296 19 314 1.78e-12 67.0
MS.gene008988.t1 MTR_7g015870 27.526 287 171 13 23 290 36 304 3.49e-13 69.3
MS.gene008988.t1 MTR_7g015870 30.319 188 115 6 108 289 21 198 9.97e-12 65.1
MS.gene008988.t1 MTR_6g092210 24.096 249 179 5 52 296 4 246 5.71e-13 67.8
MS.gene008988.t1 MTR_3g100570 27.805 205 121 6 4 197 120 308 7.54e-13 68.2
MS.gene008988.t1 MTR_6g015860 24.739 287 185 9 23 293 32 303 1.72e-12 67.0
MS.gene008988.t1 MTR_6g015860 26.842 190 123 5 106 289 15 194 6.09e-11 62.8
MS.gene008988.t1 MTR_6g091800 23.774 265 164 5 5 240 16 271 1.85e-12 66.6
MS.gene008988.t1 MTR_6g091800 23.774 265 164 5 5 240 16 271 2.60e-12 66.6
MS.gene008988.t1 MTR_3g028590 26.316 285 185 9 7 279 92 363 3.19e-12 66.6
MS.gene008988.t1 MTR_3g028590 26.316 285 185 9 7 279 96 367 3.48e-12 66.6
MS.gene008988.t1 MTR_2g032610 25.000 296 194 9 11 291 32 314 3.96e-12 66.2
MS.gene008988.t1 MTR_3g074490 24.051 316 199 10 1 296 109 403 1.08e-11 65.1
MS.gene008988.t1 MTR_8g036880 25.517 290 192 9 2 279 96 373 1.29e-11 65.1
MS.gene008988.t1 MTR_5g032420 27.358 318 189 11 14 296 9 319 1.48e-11 64.3
MS.gene008988.t1 MTR_8g068890 25.962 312 194 9 14 296 9 312 1.65e-11 64.3
MS.gene008988.t1 MTR_3g090820 27.636 275 174 10 43 297 119 388 2.05e-11 64.3
MS.gene008988.t1 MTR_8g090210 25.094 267 167 7 50 296 144 397 5.07e-11 63.2
MS.gene008988.t1 MTR_4g005330 24.581 179 122 2 119 296 121 287 5.11e-11 62.8
MS.gene008988.t1 MTR_4g005330 24.581 179 122 2 119 296 187 353 6.34e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008988.t1 AT5G46800 79.667 300 58 1 1 297 1 300 6.70e-175 485
MS.gene008988.t1 AT5G46800 79.667 300 58 1 1 297 1 300 6.70e-175 485
MS.gene008988.t1 AT5G46800 79.667 300 58 1 1 297 1 300 6.70e-175 485
MS.gene008988.t1 AT2G33820 34.314 306 173 8 6 297 16 307 8.45e-50 167
MS.gene008988.t1 AT2G33820 33.439 314 173 9 6 297 16 315 7.35e-47 160
MS.gene008988.t1 AT1G79900 34.520 281 151 7 22 296 30 283 6.35e-42 146
MS.gene008988.t1 AT2G33820 31.890 254 144 8 6 243 16 256 2.02e-33 124
MS.gene008988.t1 AT2G33820 36.458 192 105 5 115 297 43 226 4.52e-33 121
MS.gene008988.t1 AT5G48970 28.923 325 185 9 7 296 21 334 1.29e-31 120
MS.gene008988.t1 AT4G01100 29.907 321 187 8 3 297 37 345 1.15e-30 118
MS.gene008988.t1 AT4G01100 30.333 300 171 8 24 297 8 295 2.13e-29 114
MS.gene008988.t1 AT4G01100 28.955 335 186 8 3 297 37 359 1.30e-28 113
MS.gene008988.t1 AT1G25380 31.752 274 172 8 24 291 37 301 7.11e-28 110
MS.gene008988.t1 AT1G25380 31.752 274 172 8 24 291 37 301 7.11e-28 110
MS.gene008988.t1 AT3G21390 27.358 318 188 7 7 291 18 325 1.47e-26 107
MS.gene008988.t1 AT3G21390 25.366 205 132 4 10 199 132 330 8.39e-12 65.5
MS.gene008988.t1 AT3G21390 27.358 318 188 7 7 291 40 347 1.83e-26 107
MS.gene008988.t1 AT3G21390 25.366 205 132 4 10 199 154 352 8.84e-12 65.5
MS.gene008988.t1 AT2G47490 30.686 277 179 7 24 296 33 300 2.60e-25 103
MS.gene008988.t1 AT2G47490 33.149 181 108 8 121 297 30 201 1.49e-11 64.3
MS.gene008988.t1 AT5G48970 29.151 271 155 8 52 296 4 263 3.57e-25 101
MS.gene008988.t1 AT5G48970 26.500 200 127 4 8 193 64 257 1.72e-15 75.1
MS.gene008988.t1 AT3G54110 30.961 281 166 10 24 293 31 294 2.47e-23 97.8
MS.gene008988.t1 AT3G54110 31.156 199 123 3 1 197 109 295 3.19e-21 92.0
MS.gene008988.t1 AT3G54110 30.693 202 131 4 100 296 7 204 8.60e-19 85.1
MS.gene008988.t1 AT1G14140 26.812 276 192 6 21 293 29 297 1.65e-21 92.8
MS.gene008988.t1 AT1G14140 28.125 192 126 5 6 196 117 297 3.07e-13 69.3
MS.gene008988.t1 AT2G37890 27.907 301 196 5 6 296 43 332 4.08e-21 92.0
MS.gene008988.t1 AT2G37890 27.041 196 132 4 2 197 146 330 7.06e-13 68.6
MS.gene008988.t1 AT4G11440 27.797 295 184 9 10 297 332 604 6.64e-21 93.2
MS.gene008988.t1 AT4G11440 27.797 295 184 9 10 297 332 604 6.64e-21 93.2
MS.gene008988.t1 AT5G66380 26.000 300 194 9 6 290 8 294 1.42e-20 90.1
MS.gene008988.t1 AT5G66380 30.000 200 121 7 5 195 107 296 7.58e-18 82.4
MS.gene008988.t1 AT5G01340 28.521 284 183 8 10 286 19 289 2.08e-20 89.7
MS.gene008988.t1 AT5G01340 30.000 180 116 4 19 195 123 295 9.36e-14 70.9
MS.gene008988.t1 AT5G58970 30.466 279 176 7 24 296 32 298 4.89e-20 88.6
MS.gene008988.t1 AT5G58970 28.856 201 128 3 1 199 111 298 3.99e-19 85.9
MS.gene008988.t1 AT5G58970 28.780 205 138 4 97 296 5 206 1.49e-17 81.6
MS.gene008988.t1 AT1G74240 29.114 316 186 11 4 294 32 334 2.16e-19 87.4
MS.gene008988.t1 AT5G42130 29.242 277 169 5 24 293 134 390 2.68e-19 87.8
MS.gene008988.t1 AT1G14560 26.298 289 186 8 24 296 43 320 4.91e-19 86.3
MS.gene008988.t1 AT1G74240 29.293 297 172 11 23 294 3 286 9.70e-19 85.1
MS.gene008988.t1 AT4G32400 26.190 294 194 7 6 296 112 385 1.50e-18 85.5
MS.gene008988.t1 AT3G55640 30.570 193 123 4 7 199 144 325 2.28e-18 84.3
MS.gene008988.t1 AT3G55640 25.166 302 197 7 3 290 33 319 3.94e-17 80.9
MS.gene008988.t1 AT3G55640 30.348 201 128 5 100 294 30 224 4.01e-15 75.1
MS.gene008988.t1 AT3G55640 30.570 193 123 4 7 199 144 325 2.28e-18 84.3
MS.gene008988.t1 AT3G55640 25.166 302 197 7 3 290 33 319 3.94e-17 80.9
MS.gene008988.t1 AT3G55640 30.348 201 128 5 100 294 30 224 4.01e-15 75.1
MS.gene008988.t1 AT5G51050 28.425 292 183 9 10 296 225 495 2.74e-18 85.1
MS.gene008988.t1 AT5G51050 26.341 205 124 6 1 199 312 495 3.53e-12 67.0
MS.gene008988.t1 AT2G30160 27.687 307 173 11 8 294 42 319 3.94e-18 83.6
MS.gene008988.t1 AT5G58970 28.922 204 137 4 98 296 6 206 9.44e-18 81.6
MS.gene008988.t1 AT1G07030 28.283 297 181 10 8 294 40 314 1.42e-17 82.0
MS.gene008988.t1 AT5G56450 24.359 312 199 11 6 297 32 326 4.26e-17 80.5
MS.gene008988.t1 AT3G53940 25.581 301 203 5 6 296 71 360 9.42e-17 80.1
MS.gene008988.t1 AT5G61810 27.273 297 185 8 5 296 62 332 1.03e-16 79.7
MS.gene008988.t1 AT5G61810 26.570 207 122 7 1 200 150 333 1.01e-12 68.2
MS.gene008988.t1 AT4G26180 26.316 304 200 10 5 296 18 309 2.39e-16 78.6
MS.gene008988.t1 AT5G61810 27.273 297 185 8 5 296 205 475 5.28e-16 78.6
MS.gene008988.t1 AT5G61810 27.000 200 116 7 8 200 300 476 2.47e-12 67.4
MS.gene008988.t1 AT1G14560 26.136 264 168 8 24 271 43 295 7.43e-16 77.0
MS.gene008988.t1 AT1G34065 34.211 190 106 5 8 197 156 326 1.24e-15 76.6
MS.gene008988.t1 AT1G34065 28.571 224 120 6 78 293 39 230 3.31e-13 69.3
MS.gene008988.t1 AT1G34065 27.407 270 144 11 14 273 78 305 1.01e-11 65.1
MS.gene008988.t1 AT1G34065 34.211 190 106 5 8 197 163 333 1.39e-15 76.6
MS.gene008988.t1 AT1G34065 28.571 224 120 6 78 293 46 237 3.61e-13 69.3
MS.gene008988.t1 AT1G34065 27.407 270 144 11 14 273 85 312 1.01e-11 65.1
MS.gene008988.t1 AT3G55640 30.348 201 128 6 100 294 30 224 1.48e-15 75.1
MS.gene008988.t1 AT3G55640 30.348 201 128 6 100 294 30 224 1.48e-15 75.1
MS.gene008988.t1 AT4G39460 28.826 281 149 10 3 273 49 288 3.01e-15 75.1
MS.gene008988.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.87e-13 69.3
MS.gene008988.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.26e-12 67.0
MS.gene008988.t1 AT4G39460 28.826 281 149 10 3 273 49 288 3.01e-15 75.1
MS.gene008988.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.87e-13 69.3
MS.gene008988.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.26e-12 67.0
MS.gene008988.t1 AT4G39460 28.826 281 149 10 3 273 49 288 3.01e-15 75.1
MS.gene008988.t1 AT4G39460 30.319 188 101 4 103 290 53 210 3.87e-13 69.3
MS.gene008988.t1 AT4G39460 30.052 193 116 4 8 200 139 312 2.26e-12 67.0
MS.gene008988.t1 AT2G39970 25.987 304 184 11 20 290 20 315 7.35e-15 74.3
MS.gene008988.t1 AT3G20240 22.642 318 193 8 5 296 49 339 8.43e-15 74.3
MS.gene008988.t1 AT5G01500 26.619 278 183 7 21 297 132 389 8.69e-15 74.7
MS.gene008988.t1 AT1G14560 28.218 202 128 4 108 296 25 222 2.47e-14 71.2
MS.gene008988.t1 AT4G26180 26.523 279 181 10 5 271 18 284 8.88e-14 70.9
MS.gene008988.t1 AT5G07320 24.460 278 181 8 24 297 225 477 3.26e-13 70.1
MS.gene008988.t1 AT5G07320 24.623 199 123 5 8 200 300 477 1.58e-11 65.1
MS.gene008988.t1 AT3G51870 24.820 278 188 7 21 297 104 361 4.75e-13 69.3
MS.gene008988.t1 AT2G22500 28.723 188 110 8 21 199 136 308 8.29e-13 68.2
MS.gene008988.t1 AT2G22500 25.484 310 188 11 14 293 9 305 6.49e-12 65.5
MS.gene008988.t1 AT5G15640 24.653 288 186 10 23 293 43 316 1.36e-12 67.4
MS.gene008988.t1 AT5G15640 24.653 288 186 10 23 293 36 309 1.67e-12 67.4
MS.gene008988.t1 AT5G64970 26.568 271 158 9 50 296 45 298 1.67e-12 67.0
MS.gene008988.t1 AT5G64970 26.568 271 158 9 50 296 169 422 3.18e-12 67.0
MS.gene008988.t1 AT1G72820 30.256 195 112 5 108 291 31 212 4.33e-12 66.2
MS.gene008988.t1 AT1G72820 30.256 195 112 5 108 291 31 212 4.33e-12 66.2
MS.gene008988.t1 AT5G13490 25.952 289 190 9 3 279 83 359 8.72e-12 65.5
MS.gene008988.t1 AT5G13490 25.952 289 190 9 3 279 83 359 8.72e-12 65.5
MS.gene008988.t1 AT4G24570 25.723 311 194 9 14 296 9 310 2.02e-11 63.9
MS.gene008988.t1 AT3G53940 32.653 147 85 4 157 294 118 259 3.87e-11 63.2
MS.gene008988.t1 AT4G03115 27.368 190 112 6 114 296 41 211 8.27e-11 61.2
MS.gene008988.t1 AT5G09470 23.511 319 192 6 23 296 21 332 8.67e-11 62.4
MS.gene008988.t1 AT4G03115 27.368 190 112 6 114 296 41 211 9.76e-11 61.2

Find 114 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGGCCGGTGCTTCTTTC+TGG -0.061490 8.2:+35425491 MS.gene008988:CDS
CTTGGCCGGTGCTTCTTTCT+GGG 0.241979 8.2:+35425492 MS.gene008988:CDS
GGTCAGCCTCCCAGGTATTC+TGG 0.246669 8.2:+35423654 MS.gene008988:CDS
TGCAAATGCAGCATGCTTCT+TGG 0.250480 8.2:+35425678 MS.gene008988:CDS
TATAAGAACCCTAAGTATTC+TGG 0.276831 8.2:+35425565 MS.gene008988:CDS
ATGCTGTCCTGTTTACAGTT+AGG 0.302096 8.2:+35423772 MS.gene008988:CDS
AAAGGCCTATACAAGGGTTT+TGG 0.323072 8.2:+35425631 MS.gene008988:CDS
GCAGCTGTGGCTGTTAAATA+TGG 0.323087 8.2:+35425268 MS.gene008988:CDS
CAACAGTTTGTTTGTGGAGC+TGG 0.331068 8.2:+35423849 MS.gene008988:CDS
CCAAACATTATCGCGTTTCC+AGG 0.344503 8.2:-35425385 None:intergenic
GCTTTGGAGCTTGACCTTGA+TGG 0.347593 8.2:-35423613 None:intergenic
AAGAAGCATGCTGCATTTGC+AGG 0.353862 8.2:-35425676 None:intergenic
TGCTGTCCTGTTTACAGTTA+GGG 0.360522 8.2:+35423773 MS.gene008988:CDS
CAAGCACAAAGTGCGCTTGC+TGG 0.375899 8.2:+35425235 MS.gene008988:CDS
GTATAAACCCCTTGGACCTT+CGG 0.379175 8.2:-35423709 None:intergenic
CAAGGTTCTCTGATTGTTGC+TGG 0.380140 8.2:+35425466 MS.gene008988:CDS
GGAGTGGTGTAGGTTGGCTT+TGG 0.381162 8.2:-35423629 None:intergenic
GTGAATCAACAGTTTGTTTG+TGG 0.384671 8.2:+35423843 MS.gene008988:CDS
CACTCCCTGGTCAGCCTCCC+AGG 0.390074 8.2:+35423646 MS.gene008988:CDS
CAAAGTGCGCTTGCTGGCAC+TGG 0.391167 8.2:+35425241 MS.gene008988:CDS
GGCTGACCAGGGAGTGGTGT+AGG 0.403164 8.2:-35423639 None:intergenic
CCTGGAAACGCGATAATGTT+TGG 0.416228 8.2:+35425385 MS.gene008988:CDS
GCAATAAAACAACAGTTTGC+AGG 0.420000 8.2:+35425418 MS.gene008988:CDS
ATTGTTGCTGGAGGCTTGGC+CGG 0.422785 8.2:+35425478 MS.gene008988:CDS
GGAACACTTCTGCCCATTGC+AGG 0.423868 8.2:-35425655 None:intergenic
TCTGATTGTTGCTGGAGGCT+TGG 0.427870 8.2:+35425474 MS.gene008988:CDS
GTTTACAGTTAGGGGACAAA+TGG 0.441339 8.2:+35423782 MS.gene008988:CDS
TCAAATGAACCAGAATACTT+AGG 0.441953 8.2:-35425574 None:intergenic
ATCAAATGCACCAGAATACC+TGG 0.442262 8.2:-35423664 None:intergenic
TTCAGTTGGACAAGCAAGAA+AGG 0.442283 8.2:-35423889 None:intergenic
GAATACCTGGGAGGCTGACC+AGG 0.446488 8.2:-35423651 None:intergenic
GAGATGACAAGATCAGCTTT+AGG 0.446594 8.2:+35425706 MS.gene008988:CDS
CCTCTGATCGGAGAACTTGT+CGG 0.450931 8.2:-35425309 None:intergenic
AGGTATCTCGCGTCCCATTG+TGG 0.455702 8.2:-35425365 None:intergenic
CTCTGATCGGAGAACTTGTC+GGG 0.461891 8.2:-35425308 None:intergenic
CAAATGAACCAGAATACTTA+GGG 0.470391 8.2:-35425573 None:intergenic
TTTGTCCCCTAACTGTAAAC+AGG 0.473371 8.2:-35423779 None:intergenic
CAGGACCAAAACCCTTGTAT+AGG 0.476463 8.2:-35425636 None:intergenic
AAGGGGTTTATACAAAGGTA+TGG 0.477080 8.2:+35423719 MS.gene008988:CDS
AAAGGCTTACTTCCCACAAT+GGG 0.478747 8.2:+35425352 MS.gene008988:CDS
CGCAGCCCCTCCAATGGTAC+CGG 0.479760 8.2:-35423562 None:intergenic
CTGGTGCATTTGATGCCGTC+AGG 0.479987 8.2:+35423673 MS.gene008988:CDS
TGTAAACAGGACAGCATTGA+AGG 0.482656 8.2:-35423766 None:intergenic
CTGCATTTGATTAATTCAGT+TGG 0.482770 8.2:-35423903 None:intergenic
GACCTAGCAGCCGGTACCAT+TGG 0.483515 8.2:+35423552 MS.gene008988:CDS
GGTATCTCGCGTCCCATTGT+GGG 0.485877 8.2:-35425364 None:intergenic
CTTGACCTTGATGGTGTCAA+AGG 0.491589 8.2:-35423604 None:intergenic
CTCCAATGGTACCGGCTGCT+AGG 0.495927 8.2:-35423554 None:intergenic
GCAGGCGGCACCGATACCTC+TGG 0.499521 8.2:+35425436 MS.gene008988:CDS
TTGGCTTAGGCCAGAGGTAT+CGG 0.500077 8.2:-35425446 None:intergenic
CGTTAGCGGCCGAAGGTCCA+AGG 0.505132 8.2:+35423700 MS.gene008988:CDS
GACCAGGGAGTGGTGTAGGT+TGG 0.511203 8.2:-35423635 None:intergenic
ATACCTTTGTATAAACCCCT+TGG 0.513759 8.2:-35423717 None:intergenic
TGGCACTGGAACAGCAGCTG+TGG 0.515388 8.2:+35425255 MS.gene008988:CDS
AGGCTGCAACCGTAGCAAGC+GGG 0.515933 8.2:-35423746 None:intergenic
TGCCGTCAGGCAGACGTTAG+CGG 0.518635 8.2:+35423686 MS.gene008988:CDS
TTGGCCGGTGCTTCTTTCTG+GGG 0.522148 8.2:+35425493 MS.gene008988:CDS
GGCTGCAACCGTAGCAAGCG+GGG 0.523372 8.2:-35423745 None:intergenic
TATGGGCGCCCCGCTTGCTA+CGG 0.523381 8.2:+35423737 MS.gene008988:CDS
ACTTGTCGGGCCACATCCAT+TGG 0.524980 8.2:-35425295 None:intergenic
TTTGTTTGTGGAGCTGGAGC+CGG 0.525221 8.2:+35423855 MS.gene008988:CDS
CTAGCAGCCGGTACCATTGG+AGG 0.528586 8.2:+35423555 MS.gene008988:CDS
GGGGCTGCGCAATTGATAGT+TGG 0.530364 8.2:+35423576 MS.gene008988:CDS
CAATCAGAGAACCTTGGCTT+AGG 0.532063 8.2:-35425459 None:intergenic
CGACAAGTTCTCCGATCAGA+GGG 0.540590 8.2:+35425310 MS.gene008988:CDS
ACAATGGGACGCGAGATACC+TGG 0.540792 8.2:+35425367 MS.gene008988:CDS
AGAAAGATTAAAGCCACTGA+GGG 0.552045 8.2:+35425604 MS.gene008988:CDS
CAACTGAATTAATCAAATGC+AGG 0.556324 8.2:+35423904 MS.gene008988:CDS
CTGGGAGGCTGACCAGGGAG+TGG 0.557597 8.2:-35423645 None:intergenic
GATGCCCCAGAAAGAAGCAC+CGG 0.559324 8.2:-35425497 None:intergenic
CAAAGGCTTACTTCCCACAA+TGG 0.559394 8.2:+35425351 MS.gene008988:CDS
GGGATTCAAAGGCCTATACA+AGG 0.561547 8.2:+35425624 MS.gene008988:CDS
AAGAAAGGAAACAGCGACAC+CGG 0.564044 8.2:-35423874 None:intergenic
GGTTCTCTGATTGTTGCTGG+AGG 0.565281 8.2:+35425469 MS.gene008988:CDS
TTCACTGTGAGGTGAGCACC+AGG 0.566575 8.2:-35423825 None:intergenic
GGCCGCTAACGTCTGCCTGA+CGG 0.568359 8.2:-35423688 None:intergenic
TAGCAGCCGGTACCATTGGA+GGG 0.570109 8.2:+35423556 MS.gene008988:CDS
ACATCCCTTTGACACCATCA+AGG 0.573529 8.2:+35423599 MS.gene008988:CDS
ATAGATGGGAGACGTGGCTA+AGG 0.574654 8.2:+35423530 None:intergenic
GTTAGCGGCCGAAGGTCCAA+GGG 0.574705 8.2:+35423701 MS.gene008988:CDS
CCGACAAGTTCTCCGATCAG+AGG 0.577088 8.2:+35425309 MS.gene008988:CDS
CTGTGAGGTGAGCACCAGGA+TGG 0.578425 8.2:-35423821 None:intergenic
AGCAGCCGGTACCATTGGAG+GGG 0.579441 8.2:+35423557 MS.gene008988:CDS
AAAGCCACTGAGGGATTCAA+AGG 0.580482 8.2:+35425613 MS.gene008988:CDS
AGCCAACCTACACCACTCCC+TGG 0.582219 8.2:+35423633 MS.gene008988:CDS
TCATTAGTGAGGTCCCATCC+TGG 0.583140 8.2:+35423807 MS.gene008988:CDS
CAGCAACAATCAGAGAACCT+TGG 0.584834 8.2:-35425465 None:intergenic
AGGCAGACGTTAGCGGCCGA+AGG 0.586497 8.2:+35423693 MS.gene008988:CDS
AGGGGTTTATACAAAGGTAT+GGG 0.586855 8.2:+35423720 MS.gene008988:CDS
CAATTGCGCAGCCCCTCCAA+TGG 0.589387 8.2:-35423568 None:intergenic
AAGGCTGCAACCGTAGCAAG+CGG 0.590188 8.2:-35423747 None:intergenic
ACAAGTTCTCCGATCAGAGG+GGG 0.595172 8.2:+35425312 MS.gene008988:CDS
ATATGGAGGACCAATGGATG+TGG 0.607442 8.2:+35425285 MS.gene008988:CDS
GATACCTCTGGCCTAAGCCA+AGG 0.607559 8.2:+35425448 MS.gene008988:CDS
TTGACCTTGATGGTGTCAAA+GGG 0.607728 8.2:-35423603 None:intergenic
AGAACCTTGGCTTAGGCCAG+AGG 0.608842 8.2:-35425452 None:intergenic
TGTGAGGTGAGCACCAGGAT+GGG 0.609525 8.2:-35423820 None:intergenic
GCTGTCCTGTTTACAGTTAG+GGG 0.610080 8.2:+35423774 MS.gene008988:CDS
GACAAGTTCTCCGATCAGAG+GGG 0.621299 8.2:+35425311 MS.gene008988:CDS
GGTCCAAGGGGTTTATACAA+AGG 0.624894 8.2:+35423714 MS.gene008988:CDS
GTGGCTAAGGACCTAGCAGC+CGG 0.636617 8.2:+35423543 MS.gene008988:CDS
GCTGTGGCTGTTAAATATGG+AGG 0.641249 8.2:+35425271 MS.gene008988:CDS
CAGAAAGATTAAAGCCACTG+AGG 0.646297 8.2:+35425603 MS.gene008988:CDS
TAGGCCTTTGAATCCCTCAG+TGG 0.646577 8.2:-35425617 None:intergenic
AATACCTGGGAGGCTGACCA+GGG 0.652600 8.2:-35423650 None:intergenic
CAAGTTCTCCGATCAGAGGG+GGG 0.661799 8.2:+35425313 MS.gene008988:CDS
TGTTAAATATGGAGGACCAA+TGG 0.664961 8.2:+35425279 MS.gene008988:CDS
GACAAATGGAATCATTAGTG+AGG 0.669383 8.2:+35423796 MS.gene008988:CDS
GGATTCAAAGGCCTATACAA+GGG 0.670176 8.2:+35425625 MS.gene008988:CDS
TCAAATGCACCAGAATACCT+GGG 0.678659 8.2:-35423663 None:intergenic
ATAAAACAACAGTTTGCAGG+CGG 0.699836 8.2:+35425421 MS.gene008988:CDS
TTAGCGGCCGAAGGTCCAAG+GGG 0.724026 8.2:+35423702 MS.gene008988:CDS
CAAACTGTTGATTCACTGTG+AGG 0.745264 8.2:-35423836 None:intergenic
AATGCACCAGAATACCTGGG+AGG 0.779847 8.2:-35423660 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAATGAAAATTTAATAA+AGG - chr8.2:35424005-35424024 None:intergenic 10.0%
!! ATCAATGAAAATTTAATAAA+GGG - chr8.2:35424004-35424023 None:intergenic 10.0%
!! TCAAAATTAAAATAAAAAAG+TGG - chr8.2:35424276-35424295 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr8.2:35424984-35425003 MS.gene008988:intron 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG + chr8.2:35425045-35425064 MS.gene008988:intron 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG + chr8.2:35425046-35425065 MS.gene008988:intron 10.0%
!! AAGCATAAATTAAACAAATT+TGG - chr8.2:35424734-35424753 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr8.2:35425075-35425094 MS.gene008988:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8.2:35425094-35425075 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr8.2:35424853-35424872 None:intergenic 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + chr8.2:35425013-35425032 MS.gene008988:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG - chr8.2:35424818-35424837 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + chr8.2:35425012-35425031 MS.gene008988:intron 15.0%
!! AATGAAAATTTAATAAAGGG+AGG - chr8.2:35424001-35424020 None:intergenic 20.0%
!! TACAAATTGATTGAAAGAAA+AGG - chr8.2:35423954-35423973 None:intergenic 20.0%
!!! ATAAGGGTTAATTATGTTTT+TGG - chr8.2:35425133-35425152 None:intergenic 20.0%
!!! GTTTCATTTTGAATAACATT+AGG + chr8.2:35425209-35425228 MS.gene008988:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr8.2:35424764-35424783 MS.gene008988:intron 20.0%
!!! TAAAGGGTTAATTATGTTTT+TGG + chr8.2:35424604-35424623 MS.gene008988:intron 20.0%
! AAAATACGCCTCATATTTAT+CGG - chr8.2:35424140-35424159 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr8.2:35424723-35424742 None:intergenic 25.0%
! AAGTTTAGGTAAGATTCATT+AGG - chr8.2:35424242-35424261 None:intergenic 25.0%
! AGTTTAGGTAAGATTCATTA+GGG - chr8.2:35424241-35424260 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr8.2:35424788-35424807 MS.gene008988:intron 25.0%
!! AAAACTTGATTTGATAACCA+TGG + chr8.2:35424502-35424521 MS.gene008988:intron 25.0%
!! ATTAACCCTTATTTAAACAC+AGG + chr8.2:35425141-35425160 MS.gene008988:intron 25.0%
!! TCGACTTTGTACTTAATTTT+TGG + chr8.2:35425187-35425206 MS.gene008988:intron 25.0%
!!! TCAAGTTTTATGTTGTGAAT+TGG - chr8.2:35424491-35424510 None:intergenic 25.0%
!!! TCATTGATTTTGATCTCTTT+AGG + chr8.2:35424016-35424035 MS.gene008988:intron 25.0%
AAACCAGATTGTCATAAGAT+TGG + chr8.2:35424101-35424120 MS.gene008988:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr8.2:35425090-35425109 MS.gene008988:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr8.2:35425109-35425090 None:intergenic 30.0%
AGTATCTTCCGATAAATATG+AGG + chr8.2:35424129-35424148 MS.gene008988:intron 30.0%
CAAATGAACCAGAATACTTA+GGG - chr8.2:35425576-35425595 None:intergenic 30.0%
CAACTGAATTAATCAAATGC+AGG + chr8.2:35423904-35423923 MS.gene008988:CDS 30.0%
CTGCATTTGATTAATTCAGT+TGG - chr8.2:35423906-35423925 None:intergenic 30.0%
GAGTACCTGTGTTTAAATAA+GGG - chr8.2:35425149-35425168 None:intergenic 30.0%
TAACCAATCTTATGACAATC+TGG - chr8.2:35424107-35424126 None:intergenic 30.0%
TATAAGAACCCTAAGTATTC+TGG + chr8.2:35425565-35425584 MS.gene008988:CDS 30.0%
TCAAATGAACCAGAATACTT+AGG - chr8.2:35425577-35425596 None:intergenic 30.0%
TCAGTTTATTCTTATGACCA+TGG - chr8.2:35424522-35424541 None:intergenic 30.0%
TGAATTAATCAAATGCAGGT+AGG + chr8.2:35423908-35423927 MS.gene008988:intron 30.0%
! AAGCACACTTTTAACAACAT+CGG - chr8.2:35425533-35425552 None:intergenic 30.0%
! AGAGTACCTGTGTTTAAATA+AGG - chr8.2:35425150-35425169 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr8.2:35424950-35424969 None:intergenic 30.0%
!!! GAGTGCAGAATTTTTTTGTA+GGG - chr8.2:35424691-35424710 None:intergenic 30.0%
!!! TGAGTGCAGAATTTTTTTGT+AGG - chr8.2:35424692-35424711 None:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG - chr8.2:35424815-35424834 None:intergenic 30.0%
AAGGGGTTTATACAAAGGTA+TGG + chr8.2:35423719-35423738 MS.gene008988:CDS 35.0%
AGAAAGATTAAAGCCACTGA+GGG + chr8.2:35425604-35425623 MS.gene008988:CDS 35.0%
ATAAAACAACAGTTTGCAGG+CGG + chr8.2:35425421-35425440 MS.gene008988:CDS 35.0%
ATACCTTTGTATAAACCCCT+TGG - chr8.2:35423720-35423739 None:intergenic 35.0%
GACAAATGGAATCATTAGTG+AGG + chr8.2:35423796-35423815 MS.gene008988:CDS 35.0%
GCAATAAAACAACAGTTTGC+AGG + chr8.2:35425418-35425437 MS.gene008988:CDS 35.0%
TGCAAAATAGATAGACACTG+AGG - chr8.2:35424199-35424218 None:intergenic 35.0%
TGGTTTATGTCAACTATGAG+AGG - chr8.2:35424087-35424106 None:intergenic 35.0%
TGTTAAATATGGAGGACCAA+TGG + chr8.2:35425279-35425298 MS.gene008988:CDS 35.0%
TTATGTCAACTATGAGAGGA+CGG - chr8.2:35424083-35424102 None:intergenic 35.0%
! ACACTTTTAACAACATCGGT+TGG - chr8.2:35425529-35425548 None:intergenic 35.0%
! AGGGGTTTATACAAAGGTAT+GGG + chr8.2:35423720-35423739 MS.gene008988:CDS 35.0%
! GTGAATCAACAGTTTGTTTG+TGG + chr8.2:35423843-35423862 MS.gene008988:CDS 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr8.2:35425106-35425125 MS.gene008988:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr8.2:35425125-35425106 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr8.2:35425105-35425124 MS.gene008988:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr8.2:35425124-35425105 None:intergenic 35.0%
!! ACTGAGGATTTGTATCGATT+GGG - chr8.2:35424183-35424202 None:intergenic 35.0%
!! CACTTTTAACAACATCGGTT+GGG - chr8.2:35425528-35425547 None:intergenic 35.0%
AAAGGCTTACTTCCCACAAT+GGG + chr8.2:35425352-35425371 MS.gene008988:CDS 40.0%
ATCAAATGCACCAGAATACC+TGG - chr8.2:35423667-35423686 None:intergenic 40.0%
ATGCTGTCCTGTTTACAGTT+AGG + chr8.2:35423772-35423791 MS.gene008988:CDS 40.0%
CAGAAAGATTAAAGCCACTG+AGG + chr8.2:35425603-35425622 MS.gene008988:CDS 40.0%
GAGATGACAAGATCAGCTTT+AGG + chr8.2:35425706-35425725 MS.gene008988:CDS 40.0%
GGATTCAAAGGCCTATACAA+GGG + chr8.2:35425625-35425644 MS.gene008988:CDS 40.0%
GTTTACAGTTAGGGGACAAA+TGG + chr8.2:35423782-35423801 MS.gene008988:CDS 40.0%
TCAAATGCACCAGAATACCT+GGG - chr8.2:35423666-35423685 None:intergenic 40.0%
TGCTGTCCTGTTTACAGTTA+GGG + chr8.2:35423773-35423792 MS.gene008988:CDS 40.0%
TGGACGAGTACACTAAGTTT+AGG - chr8.2:35424256-35424275 None:intergenic 40.0%
TTCAGTTGGACAAGCAAGAA+AGG - chr8.2:35423892-35423911 None:intergenic 40.0%
TTTGTCCCCTAACTGTAAAC+AGG - chr8.2:35423782-35423801 None:intergenic 40.0%
! AAAGGCCTATACAAGGGTTT+TGG + chr8.2:35425631-35425650 MS.gene008988:CDS 40.0%
! CACTGAGGATTTGTATCGAT+TGG - chr8.2:35424184-35424203 None:intergenic 40.0%
! TGTAAACAGGACAGCATTGA+AGG - chr8.2:35423769-35423788 None:intergenic 40.0%
!! CAAACTGTTGATTCACTGTG+AGG - chr8.2:35423839-35423858 None:intergenic 40.0%
!! CTGAGGATTTGTATCGATTG+GGG - chr8.2:35424182-35424201 None:intergenic 40.0%
!! TTGACCTTGATGGTGTCAAA+GGG - chr8.2:35423606-35423625 None:intergenic 40.0%
AAAGCCACTGAGGGATTCAA+AGG + chr8.2:35425613-35425632 MS.gene008988:CDS 45.0%
AAGAAAGGAAACAGCGACAC+CGG - chr8.2:35423877-35423896 None:intergenic 45.0%
ACATCCCTTTGACACCATCA+AGG + chr8.2:35423599-35423618 MS.gene008988:CDS 45.0%
ATATGGAGGACCAATGGATG+TGG + chr8.2:35425285-35425304 MS.gene008988:CDS 45.0%
CAAAGGCTTACTTCCCACAA+TGG + chr8.2:35425351-35425370 MS.gene008988:CDS 45.0%
CAAGGTTCTCTGATTGTTGC+TGG + chr8.2:35425466-35425485 MS.gene008988:CDS 45.0%
CAATCAGAGAACCTTGGCTT+AGG - chr8.2:35425462-35425481 None:intergenic 45.0%
CAGCAACAATCAGAGAACCT+TGG - chr8.2:35425468-35425487 None:intergenic 45.0%
CAGGACCAAAACCCTTGTAT+AGG - chr8.2:35425639-35425658 None:intergenic 45.0%
CCAAACATTATCGCGTTTCC+AGG - chr8.2:35425388-35425407 None:intergenic 45.0%
CCTGGAAACGCGATAATGTT+TGG + chr8.2:35425385-35425404 MS.gene008988:CDS 45.0%
GCAGCTGTGGCTGTTAAATA+TGG + chr8.2:35425268-35425287 MS.gene008988:CDS 45.0%
GCTGTCCTGTTTACAGTTAG+GGG + chr8.2:35423774-35423793 MS.gene008988:CDS 45.0%
GCTGTGGCTGTTAAATATGG+AGG + chr8.2:35425271-35425290 MS.gene008988:CDS 45.0%
GGGATTCAAAGGCCTATACA+AGG + chr8.2:35425624-35425643 MS.gene008988:CDS 45.0%
GGTCCAAGGGGTTTATACAA+AGG + chr8.2:35423714-35423733 MS.gene008988:CDS 45.0%
GTATAAACCCCTTGGACCTT+CGG - chr8.2:35423712-35423731 None:intergenic 45.0%
TGCAAATGCAGCATGCTTCT+TGG + chr8.2:35425678-35425697 MS.gene008988:CDS 45.0%
! AAGAAGCATGCTGCATTTGC+AGG - chr8.2:35425679-35425698 None:intergenic 45.0%
! CAACAGTTTGTTTGTGGAGC+TGG + chr8.2:35423849-35423868 MS.gene008988:CDS 45.0%
!! AAGGGTTTTGGTCCTGCAAT+GGG + chr8.2:35425643-35425662 MS.gene008988:CDS 45.0%
!! CTTGACCTTGATGGTGTCAA+AGG - chr8.2:35423607-35423626 None:intergenic 45.0%
!!! ATTTTTCATATATTATTTAA+AGG + chr8.2:35424587-35424606 MS.gene008988:intron 5.0%
!!! TTTTTCATATATTATTTAAA+GGG + chr8.2:35424588-35424607 MS.gene008988:intron 5.0%
AATGCACCAGAATACCTGGG+AGG - chr8.2:35423663-35423682 None:intergenic 50.0%
ACAAGTTCTCCGATCAGAGG+GGG + chr8.2:35425312-35425331 MS.gene008988:CDS 50.0%
CCTCTGATCGGAGAACTTGT+CGG - chr8.2:35425312-35425331 None:intergenic 50.0%
CGACAAGTTCTCCGATCAGA+GGG + chr8.2:35425310-35425329 MS.gene008988:CDS 50.0%
CTCTGATCGGAGAACTTGTC+GGG - chr8.2:35425311-35425330 None:intergenic 50.0%
GACAAGTTCTCCGATCAGAG+GGG + chr8.2:35425311-35425330 MS.gene008988:CDS 50.0%
GGTTCTCTGATTGTTGCTGG+AGG + chr8.2:35425469-35425488 MS.gene008988:CDS 50.0%
TAGGCCTTTGAATCCCTCAG+TGG - chr8.2:35425620-35425639 None:intergenic 50.0%
TCATTAGTGAGGTCCCATCC+TGG + chr8.2:35423807-35423826 MS.gene008988:CDS 50.0%
TCTGATTGTTGCTGGAGGCT+TGG + chr8.2:35425474-35425493 MS.gene008988:CDS 50.0%
TTTGTTTGTGGAGCTGGAGC+CGG + chr8.2:35423855-35423874 MS.gene008988:CDS 50.0%
! GGCGTGAGAGGTCTTTTCAA+AGG + chr8.2:35425334-35425353 MS.gene008988:CDS 50.0%
! TTGGCTTAGGCCAGAGGTAT+CGG - chr8.2:35425449-35425468 None:intergenic 50.0%
!! CAAGGGTTTTGGTCCTGCAA+TGG + chr8.2:35425642-35425661 MS.gene008988:CDS 50.0%
!! GCTTTGGAGCTTGACCTTGA+TGG - chr8.2:35423616-35423635 None:intergenic 50.0%
AAGGCTGCAACCGTAGCAAG+CGG - chr8.2:35423750-35423769 None:intergenic 55.0%
AATACCTGGGAGGCTGACCA+GGG - chr8.2:35423653-35423672 None:intergenic 55.0%
ACAATGGGACGCGAGATACC+TGG + chr8.2:35425367-35425386 MS.gene008988:CDS 55.0%
ACTTGTCGGGCCACATCCAT+TGG - chr8.2:35425298-35425317 None:intergenic 55.0%
AGAACCTTGGCTTAGGCCAG+AGG - chr8.2:35425455-35425474 None:intergenic 55.0%
AGGTATCTCGCGTCCCATTG+TGG - chr8.2:35425368-35425387 None:intergenic 55.0%
ATTGTTGCTGGAGGCTTGGC+CGG + chr8.2:35425478-35425497 MS.gene008988:CDS 55.0%
CAAGCACAAAGTGCGCTTGC+TGG + chr8.2:35425235-35425254 MS.gene008988:CDS 55.0%
CAAGTTCTCCGATCAGAGGG+GGG + chr8.2:35425313-35425332 MS.gene008988:CDS 55.0%
CCGACAAGTTCTCCGATCAG+AGG + chr8.2:35425309-35425328 MS.gene008988:CDS 55.0%
CTGGTGCATTTGATGCCGTC+AGG + chr8.2:35423673-35423692 MS.gene008988:CDS 55.0%
CTTGGCCGGTGCTTCTTTCT+GGG + chr8.2:35425492-35425511 MS.gene008988:CDS 55.0%
GATACCTCTGGCCTAAGCCA+AGG + chr8.2:35425448-35425467 MS.gene008988:CDS 55.0%
GGAACACTTCTGCCCATTGC+AGG - chr8.2:35425658-35425677 None:intergenic 55.0%
GGTATCTCGCGTCCCATTGT+GGG - chr8.2:35425367-35425386 None:intergenic 55.0%
TAGCAGCCGGTACCATTGGA+GGG + chr8.2:35423556-35423575 MS.gene008988:CDS 55.0%
TGTGAGGTGAGCACCAGGAT+GGG - chr8.2:35423823-35423842 None:intergenic 55.0%
TTCACTGTGAGGTGAGCACC+AGG - chr8.2:35423828-35423847 None:intergenic 55.0%
TTGGCCGGTGCTTCTTTCTG+GGG + chr8.2:35425493-35425512 MS.gene008988:CDS 55.0%
! GATGCCCCAGAAAGAAGCAC+CGG - chr8.2:35425500-35425519 None:intergenic 55.0%
! GGGGCTGCGCAATTGATAGT+TGG + chr8.2:35423576-35423595 MS.gene008988:CDS 55.0%
!! GGAGTGGTGTAGGTTGGCTT+TGG - chr8.2:35423632-35423651 None:intergenic 55.0%
AGCAGCCGGTACCATTGGAG+GGG + chr8.2:35423557-35423576 MS.gene008988:CDS 60.0%
AGCCAACCTACACCACTCCC+TGG + chr8.2:35423633-35423652 MS.gene008988:CDS 60.0%
AGGCTGCAACCGTAGCAAGC+GGG - chr8.2:35423749-35423768 None:intergenic 60.0%
CAATTGCGCAGCCCCTCCAA+TGG - chr8.2:35423571-35423590 None:intergenic 60.0%
CTAGCAGCCGGTACCATTGG+AGG + chr8.2:35423555-35423574 MS.gene008988:CDS 60.0%
CTGTGAGGTGAGCACCAGGA+TGG - chr8.2:35423824-35423843 None:intergenic 60.0%
GAATACCTGGGAGGCTGACC+AGG - chr8.2:35423654-35423673 None:intergenic 60.0%
GACCAGGGAGTGGTGTAGGT+TGG - chr8.2:35423638-35423657 None:intergenic 60.0%
GACCTAGCAGCCGGTACCAT+TGG + chr8.2:35423552-35423571 MS.gene008988:CDS 60.0%
GCTTGGCCGGTGCTTCTTTC+TGG + chr8.2:35425491-35425510 MS.gene008988:CDS 60.0%
GGTCAGCCTCCCAGGTATTC+TGG + chr8.2:35423654-35423673 MS.gene008988:CDS 60.0%
GTGGCTAAGGACCTAGCAGC+CGG + chr8.2:35423543-35423562 MS.gene008988:CDS 60.0%
GTTAGCGGCCGAAGGTCCAA+GGG + chr8.2:35423701-35423720 MS.gene008988:CDS 60.0%
TGCCGTCAGGCAGACGTTAG+CGG + chr8.2:35423686-35423705 MS.gene008988:CDS 60.0%
TTAGCGGCCGAAGGTCCAAG+GGG + chr8.2:35423702-35423721 MS.gene008988:CDS 60.0%
! CAAAGTGCGCTTGCTGGCAC+TGG + chr8.2:35425241-35425260 MS.gene008988:CDS 60.0%
! TGGCACTGGAACAGCAGCTG+TGG + chr8.2:35425255-35425274 MS.gene008988:CDS 60.0%
!! CTCCAATGGTACCGGCTGCT+AGG - chr8.2:35423557-35423576 None:intergenic 60.0%
AGGCAGACGTTAGCGGCCGA+AGG + chr8.2:35423693-35423712 MS.gene008988:CDS 65.0%
CGCAGCCCCTCCAATGGTAC+CGG - chr8.2:35423565-35423584 None:intergenic 65.0%
CGTTAGCGGCCGAAGGTCCA+AGG + chr8.2:35423700-35423719 MS.gene008988:CDS 65.0%
CTCTCACGCCCCCCTCTGAT+CGG - chr8.2:35425324-35425343 None:intergenic 65.0%
GGCCGCTAACGTCTGCCTGA+CGG - chr8.2:35423691-35423710 None:intergenic 65.0%
GGCTGACCAGGGAGTGGTGT+AGG - chr8.2:35423642-35423661 None:intergenic 65.0%
GGCTGCAACCGTAGCAAGCG+GGG - chr8.2:35423748-35423767 None:intergenic 65.0%
! TATGGGCGCCCCGCTTGCTA+CGG + chr8.2:35423737-35423756 MS.gene008988:CDS 65.0%
CACTCCCTGGTCAGCCTCCC+AGG + chr8.2:35423646-35423665 MS.gene008988:CDS 70.0%
CTGGGAGGCTGACCAGGGAG+TGG - chr8.2:35423648-35423667 None:intergenic 70.0%
! CGATCAGAGGGGGGCGTGAG+AGG + chr8.2:35425322-35425341 MS.gene008988:CDS 70.0%
!! GCAGGCGGCACCGATACCTC+TGG + chr8.2:35425436-35425455 MS.gene008988:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 35423534 35425732 35423534 ID=MS.gene008988
chr8.2 mRNA 35423534 35425732 35423534 ID=MS.gene008988.t1;Parent=MS.gene008988
chr8.2 exon 35423534 35423925 35423534 ID=MS.gene008988.t1.exon1;Parent=MS.gene008988.t1
chr8.2 CDS 35423534 35423925 35423534 ID=cds.MS.gene008988.t1;Parent=MS.gene008988.t1
chr8.2 exon 35425231 35425732 35425231 ID=MS.gene008988.t1.exon2;Parent=MS.gene008988.t1
chr8.2 CDS 35425231 35425732 35425231 ID=cds.MS.gene008988.t1;Parent=MS.gene008988.t1
Gene Sequence

>MS.gene008988

ATGGGAGACGTGGCTAAGGACCTAGCAGCCGGTACCATTGGAGGGGCTGCGCAATTGATAGTTGGACATCCCTTTGACACCATCAAGGTCAAGCTCCAAAGCCAACCTACACCACTCCCTGGTCAGCCTCCCAGGTATTCTGGTGCATTTGATGCCGTCAGGCAGACGTTAGCGGCCGAAGGTCCAAGGGGTTTATACAAAGGTATGGGCGCCCCGCTTGCTACGGTTGCAGCCTTCAATGCTGTCCTGTTTACAGTTAGGGGACAAATGGAATCATTAGTGAGGTCCCATCCTGGTGCTCACCTCACAGTGAATCAACAGTTTGTTTGTGGAGCTGGAGCCGGTGTCGCTGTTTCCTTTCTTGCTTGTCCAACTGAATTAATCAAATGCAGGTAGGTCAGCTGTTCTAATTTTCTTCCTTTTCTTTCAATCAATTTGTATAGATTTTTAACGTTCTTTATTCTCCTCCCTTTATTAAATTTTCATTGATTTTGATCTCTTTAGGAAAGAATAGAACTTTTTAGTTTTTATTTGTTTCTCTATAAACCGTCCTCTCATAGTTGACATAAACCAGATTGTCATAAGATTGGTTATCAGTATCTTCCGATAAATATGAGGCGTATTTTGATTTGATTAAAAATTGAACCCCAATCGATACAAATCCTCAGTGTCTATCTATTTTGCACATGTATTTCGTCTTGAATCCCTAATGAATCTTACCTAAACTTAGTGTACTCGTCCACTTTTTTATTTTAATTTTGAATAGTCAGTCACTTTTCTTTTGTCATTTGATTCAAAACTTAATTCTTGAATTATTTTGAAATTCATACATGATATATCAGCTCATGATTTTGCTACGTCACTTGTTTTTTTACGTAAAATGTCTTATTTTAATCAGTAATGTATCGTATGATTCATAATAAGATTCGATTCACGTTTCAGAAAATAGTTCTTCCAATTCACAACATAAAACTTGATTTGATAACCATGGTCATAAGAATAAACTGAATGAATTCAGCAGCAGATTAGTCATATGATTAGCTATTGCTTATGATTTTTCATATATTATTTAAAGGGTTAATTATGTTTTTGGTCCCTACAAAATTGCGACCTTGTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTTTAATCCCTACAAAAAAATTCTGCACTCAATATTAGTCCTTACTCAATCCAAATTTGTTTAATTTATGCTTAAACTCTTAAGTTTTTCAACAATTTTTTACAGGCGTGTTAAGAACGTTATTAAAAGGTCCTCCGAAAAAAATATCGCAAAAATTTGATTTCTACGTCCATATTTTTGTTACTTATATCTTAAACTTTTGTCGTTTTAAAAAATTCATATTTAATTTATTTCATGTTAAAAAATTATAGATTTTAGTAAATGAACCTTTCATAGTGTTCTAAACTTGTATAAAAAGAATCGTTAAAAAATTTAAGAGTTTAAGGATAATTAAACAAAATTTATTTTAGCAGGGACTAAAATTATAAGTAAATTTTTTTTTGTAGGGATTAAAAATGCTATTAAAATTAAGTAAGGACTAAACTTACAAGGTCGCAATTTTGTAGGGACCAAAAACATAATTAACCCTTATTTAAACACAGGTACTCTGATACTCAAACTATGTATCGACTTTGTACTTAATTTTTGGTTTCATTTTGAATAACATTAGGTTGCAAGCACAAAGTGCGCTTGCTGGCACTGGAACAGCAGCTGTGGCTGTTAAATATGGAGGACCAATGGATGTGGCCCGACAAGTTCTCCGATCAGAGGGGGGCGTGAGAGGTCTTTTCAAAGGCTTACTTCCCACAATGGGACGCGAGATACCTGGAAACGCGATAATGTTTGGTGTATATGAAGCAATAAAACAACAGTTTGCAGGCGGCACCGATACCTCTGGCCTAAGCCAAGGTTCTCTGATTGTTGCTGGAGGCTTGGCCGGTGCTTCTTTCTGGGGCATCGTTTACCCAACCGATGTTGTTAAAAGTGTGCTTCAAGTAGATGATTATAAGAACCCTAAGTATTCTGGTTCATTTGATGCTTTCAGAAAGATTAAAGCCACTGAGGGATTCAAAGGCCTATACAAGGGTTTTGGTCCTGCAATGGGCAGAAGTGTTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTTTAGGATGA

Protein sequence

>MS.gene008988.t1

MGDVAKDLAAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPRYSGAFDAVRQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRSHPGAHLTVNQQFVCGAGAGVAVSFLACPTELIKCRLQAQSALAGTGTAAVAVKYGGPMDVARQVLRSEGGVRGLFKGLLPTMGREIPGNAIMFGVYEAIKQQFAGGTDTSGLSQGSLIVAGGLAGASFWGIVYPTDVVKSVLQVDDYKNPKYSGSFDAFRKIKATEGFKGLYKGFGPAMGRSVPANAACFLAYEMTRSALG