Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068250.t1 | XP_003604475.1 | 98.4 | 304 | 5 | 0 | 1 | 304 | 1 | 304 | 3.50E-170 | 607.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068250.t1 | Q9CA93 | 71.8 | 294 | 74 | 4 | 1 | 294 | 1 | 285 | 1.3e-117 | 424.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068250.t1 | G7JJD6 | 98.4 | 304 | 5 | 0 | 1 | 304 | 1 | 304 | 2.5e-170 | 607.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene068250 | 0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene068250 | 0.830113 | 3.53E-55 | -1.69E-46 |
| MS.gene050508 | MS.gene068250 | 0.812852 | 3.44E-51 | -1.69E-46 |
| MS.gene050605 | MS.gene068250 | 0.814363 | 1.60E-51 | -1.69E-46 |
| MS.gene051122 | MS.gene068250 | 0.820617 | 6.24E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene068250 | 0.827883 | 1.22E-54 | -1.69E-46 |
| MS.gene051452 | MS.gene068250 | 0.806656 | 7.40E-50 | -1.69E-46 |
| MS.gene051597 | MS.gene068250 | 0.816838 | 4.50E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene068250 | 0.810814 | 9.56E-51 | -1.69E-46 |
| MS.gene052500 | MS.gene068250 | 0.856468 | 3.15E-62 | -1.69E-46 |
| MS.gene052502 | MS.gene068250 | 0.8527 | 3.89E-61 | -1.69E-46 |
| MS.gene052824 | MS.gene068250 | 0.826064 | 3.33E-54 | -1.69E-46 |
| MS.gene052826 | MS.gene068250 | 0.854364 | 1.29E-61 | -1.69E-46 |
| MS.gene052954 | MS.gene068250 | 0.923095 | 4.17E-89 | -1.69E-46 |
| MS.gene053006 | MS.gene068250 | 0.82633 | 2.88E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene068250 | 0.802635 | 5.11E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene068250 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene068250 | 0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene068250 | 0.826826 | 2.19E-54 | -1.69E-46 |
| MS.gene05510 | MS.gene068250 | 0.804339 | 2.27E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene068250 | 0.807865 | 4.10E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene068250 | 0.819718 | 1.00E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene068250 | 0.830096 | 3.56E-55 | -1.69E-46 |
| MS.gene056506 | MS.gene068250 | 0.832237 | 1.06E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene068250 | 0.832647 | 8.39E-56 | -1.69E-46 |
| MS.gene057392 | MS.gene068250 | 0.829691 | 4.47E-55 | -1.69E-46 |
| MS.gene058008 | MS.gene068250 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene058009 | MS.gene068250 | 0.807069 | 6.05E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene068250 | 0.804096 | 2.54E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene068250 | 0.824003 | 1.02E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene068250 | 0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene059710 | MS.gene068250 | 0.833541 | 5.03E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene068250 | 0.82585 | 3.74E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene068250 | 0.814328 | 1.63E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068250 | MS.gene47475 | PPI |
| MS.gene036285 | MS.gene068250 | PPI |
| MS.gene068250 | MS.gene008988 | PPI |
| MS.gene068250 | MS.gene65990 | PPI |
| MS.gene048432 | MS.gene068250 | PPI |
| MS.gene068250 | MS.gene069192 | PPI |
| MS.gene068250 | MS.gene027875 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068250.t1 | MTR_4g012850 | 98.355 | 304 | 5 | 0 | 1 | 304 | 1 | 304 | 0.0 | 617 |
| MS.gene068250.t1 | MTR_2g102010 | 61.409 | 298 | 111 | 3 | 1 | 295 | 1 | 297 | 2.29e-125 | 360 |
| MS.gene068250.t1 | MTR_8g066975 | 36.207 | 290 | 167 | 6 | 14 | 288 | 6 | 292 | 1.25e-47 | 161 |
| MS.gene068250.t1 | MTR_5g030530 | 33.333 | 294 | 170 | 8 | 14 | 288 | 6 | 292 | 2.90e-41 | 145 |
| MS.gene068250.t1 | MTR_5g030530 | 30.198 | 202 | 117 | 9 | 107 | 292 | 6 | 199 | 1.01e-11 | 64.7 |
| MS.gene068250.t1 | MTR_4g088545 | 27.090 | 299 | 202 | 5 | 8 | 292 | 4 | 300 | 1.67e-31 | 119 |
| MS.gene068250.t1 | MTR_8g096050 | 27.798 | 277 | 191 | 5 | 14 | 286 | 225 | 496 | 5.04e-27 | 110 |
| MS.gene068250.t1 | MTR_8g096050 | 29.592 | 196 | 116 | 8 | 11 | 194 | 317 | 502 | 1.23e-12 | 68.6 |
| MS.gene068250.t1 | MTR_7g084400 | 26.950 | 282 | 184 | 5 | 14 | 286 | 211 | 479 | 2.40e-26 | 108 |
| MS.gene068250.t1 | MTR_3g098460 | 25.784 | 287 | 204 | 4 | 5 | 286 | 192 | 474 | 5.89e-26 | 107 |
| MS.gene068250.t1 | MTR_4g088545 | 27.869 | 244 | 161 | 4 | 8 | 237 | 4 | 246 | 4.39e-25 | 101 |
| MS.gene068250.t1 | MTR_4g088545 | 25.904 | 166 | 117 | 2 | 126 | 286 | 28 | 192 | 1.15e-13 | 70.1 |
| MS.gene068250.t1 | MTR_4g057850 | 33.206 | 262 | 158 | 9 | 17 | 267 | 23 | 278 | 5.74e-25 | 102 |
| MS.gene068250.t1 | MTR_4g057850 | 29.208 | 202 | 112 | 7 | 97 | 284 | 10 | 194 | 1.10e-11 | 64.7 |
| MS.gene068250.t1 | MTR_1g097890 | 29.643 | 280 | 166 | 8 | 17 | 292 | 52 | 304 | 1.06e-24 | 101 |
| MS.gene068250.t1 | MTR_8g092080 | 30.714 | 280 | 156 | 11 | 22 | 292 | 55 | 305 | 8.03e-24 | 99.4 |
| MS.gene068250.t1 | MTR_3g104600 | 28.053 | 303 | 188 | 8 | 14 | 292 | 33 | 329 | 6.12e-23 | 97.4 |
| MS.gene068250.t1 | MTR_8g027975 | 32.212 | 208 | 126 | 6 | 101 | 296 | 37 | 241 | 7.19e-23 | 97.4 |
| MS.gene068250.t1 | MTR_8g027975 | 23.975 | 317 | 209 | 8 | 5 | 292 | 40 | 353 | 3.89e-18 | 84.0 |
| MS.gene068250.t1 | MTR_4g088545 | 27.411 | 197 | 133 | 3 | 8 | 195 | 4 | 199 | 1.02e-22 | 94.7 |
| MS.gene068250.t1 | MTR_4g088545 | 25.904 | 166 | 117 | 2 | 126 | 286 | 28 | 192 | 9.89e-14 | 69.7 |
| MS.gene068250.t1 | MTR_8g098240 | 30.769 | 273 | 172 | 7 | 18 | 286 | 322 | 581 | 4.72e-22 | 96.7 |
| MS.gene068250.t1 | MTR_8g098240 | 27.746 | 173 | 118 | 5 | 22 | 191 | 416 | 584 | 6.50e-12 | 66.2 |
| MS.gene068250.t1 | MTR_6g034515 | 26.950 | 282 | 183 | 7 | 31 | 302 | 82 | 350 | 5.63e-22 | 94.7 |
| MS.gene068250.t1 | MTR_5g009500 | 32.178 | 202 | 122 | 6 | 97 | 286 | 20 | 218 | 6.06e-22 | 94.7 |
| MS.gene068250.t1 | MTR_5g009500 | 25.407 | 307 | 197 | 9 | 14 | 292 | 36 | 338 | 5.56e-18 | 83.6 |
| MS.gene068250.t1 | MTR_7g109135 | 28.231 | 294 | 182 | 10 | 22 | 295 | 25 | 309 | 6.31e-22 | 94.0 |
| MS.gene068250.t1 | MTR_7g109135 | 32.124 | 193 | 122 | 6 | 110 | 297 | 22 | 210 | 8.04e-16 | 77.0 |
| MS.gene068250.t1 | MTR_1g090330 | 26.070 | 257 | 169 | 7 | 31 | 273 | 29 | 278 | 2.18e-19 | 86.7 |
| MS.gene068250.t1 | MTR_1g090330 | 30.114 | 176 | 115 | 2 | 126 | 296 | 30 | 202 | 7.54e-19 | 85.1 |
| MS.gene068250.t1 | MTR_4g114320 | 24.055 | 291 | 212 | 4 | 8 | 296 | 115 | 398 | 3.02e-19 | 87.4 |
| MS.gene068250.t1 | MTR_1g012030 | 25.347 | 288 | 204 | 6 | 8 | 292 | 131 | 410 | 6.38e-19 | 86.7 |
| MS.gene068250.t1 | MTR_1g012030 | 27.835 | 194 | 128 | 4 | 111 | 304 | 140 | 321 | 1.91e-17 | 82.4 |
| MS.gene068250.t1 | MTR_8g086070 | 26.054 | 261 | 176 | 6 | 4 | 259 | 15 | 263 | 8.54e-19 | 85.1 |
| MS.gene068250.t1 | MTR_3g107510 | 26.471 | 204 | 137 | 4 | 104 | 304 | 117 | 310 | 1.48e-18 | 85.5 |
| MS.gene068250.t1 | MTR_3g107510 | 22.759 | 290 | 217 | 4 | 8 | 296 | 114 | 397 | 2.90e-18 | 84.7 |
| MS.gene068250.t1 | MTR_1g087840 | 27.273 | 275 | 180 | 7 | 32 | 292 | 35 | 303 | 9.78e-18 | 82.4 |
| MS.gene068250.t1 | MTR_1g087840 | 31.351 | 185 | 119 | 4 | 123 | 302 | 32 | 213 | 5.68e-14 | 71.6 |
| MS.gene068250.t1 | MTR_7g109135 | 26.871 | 294 | 179 | 10 | 22 | 295 | 25 | 302 | 1.11e-17 | 82.0 |
| MS.gene068250.t1 | MTR_7g109135 | 28.796 | 191 | 124 | 6 | 110 | 297 | 22 | 203 | 6.27e-11 | 62.4 |
| MS.gene068250.t1 | MTR_6g015860 | 24.503 | 302 | 200 | 11 | 25 | 303 | 21 | 317 | 1.96e-17 | 81.6 |
| MS.gene068250.t1 | MTR_6g091800 | 25.397 | 315 | 195 | 9 | 1 | 292 | 9 | 306 | 2.69e-17 | 81.3 |
| MS.gene068250.t1 | MTR_6g091800 | 30.097 | 206 | 121 | 7 | 97 | 286 | 5 | 203 | 1.08e-16 | 79.3 |
| MS.gene068250.t1 | MTR_5g055410 | 25.623 | 281 | 177 | 7 | 32 | 292 | 37 | 305 | 2.75e-17 | 81.6 |
| MS.gene068250.t1 | MTR_5g055410 | 32.065 | 184 | 116 | 5 | 123 | 302 | 34 | 212 | 3.55e-15 | 75.5 |
| MS.gene068250.t1 | MTR_6g091800 | 29.798 | 198 | 117 | 6 | 104 | 286 | 13 | 203 | 4.68e-17 | 79.7 |
| MS.gene068250.t1 | MTR_6g091800 | 27.143 | 280 | 158 | 10 | 1 | 256 | 9 | 266 | 5.22e-17 | 79.7 |
| MS.gene068250.t1 | MTR_6g091800 | 30.097 | 206 | 121 | 7 | 97 | 286 | 5 | 203 | 5.33e-17 | 79.7 |
| MS.gene068250.t1 | MTR_6g091800 | 27.059 | 255 | 149 | 8 | 1 | 235 | 9 | 246 | 8.47e-15 | 73.2 |
| MS.gene068250.t1 | MTR_7g109135 | 27.500 | 240 | 156 | 7 | 65 | 295 | 1 | 231 | 1.84e-16 | 77.4 |
| MS.gene068250.t1 | MTR_7g064980 | 29.825 | 171 | 110 | 3 | 125 | 286 | 40 | 209 | 2.12e-16 | 78.6 |
| MS.gene068250.t1 | MTR_7g064980 | 30.435 | 184 | 122 | 4 | 15 | 194 | 133 | 314 | 9.56e-16 | 76.6 |
| MS.gene068250.t1 | MTR_6g091800 | 30.481 | 187 | 107 | 7 | 97 | 267 | 5 | 184 | 2.30e-16 | 76.3 |
| MS.gene068250.t1 | MTR_5g073040 | 28.829 | 222 | 141 | 5 | 74 | 292 | 5 | 212 | 2.54e-16 | 78.6 |
| MS.gene068250.t1 | MTR_5g073040 | 27.413 | 259 | 169 | 6 | 17 | 266 | 40 | 288 | 1.00e-13 | 70.9 |
| MS.gene068250.t1 | MTR_8g019480 | 24.422 | 303 | 194 | 6 | 31 | 298 | 48 | 350 | 3.14e-16 | 78.6 |
| MS.gene068250.t1 | MTR_7g084400 | 28.571 | 196 | 125 | 6 | 96 | 286 | 194 | 379 | 5.79e-16 | 78.2 |
| MS.gene068250.t1 | MTR_7g084400 | 25.561 | 223 | 147 | 5 | 14 | 227 | 205 | 417 | 3.95e-15 | 75.5 |
| MS.gene068250.t1 | MTR_5g081910 | 26.490 | 302 | 165 | 12 | 31 | 286 | 23 | 313 | 2.72e-15 | 75.5 |
| MS.gene068250.t1 | MTR_3g100570 | 23.151 | 311 | 195 | 9 | 22 | 295 | 9 | 312 | 5.48e-15 | 74.3 |
| MS.gene068250.t1 | MTR_7g109135 | 28.261 | 184 | 115 | 6 | 121 | 295 | 35 | 210 | 5.68e-15 | 73.2 |
| MS.gene068250.t1 | MTR_3g025800 | 27.331 | 311 | 192 | 8 | 14 | 294 | 26 | 332 | 1.17e-14 | 73.9 |
| MS.gene068250.t1 | MTR_4g018750 | 23.826 | 298 | 199 | 8 | 11 | 291 | 10 | 296 | 1.36e-14 | 73.2 |
| MS.gene068250.t1 | MTR_6g091800 | 23.615 | 343 | 190 | 11 | 1 | 292 | 9 | 330 | 2.28e-14 | 72.8 |
| MS.gene068250.t1 | MTR_6g091800 | 24.522 | 314 | 173 | 10 | 1 | 267 | 9 | 305 | 2.35e-14 | 72.8 |
| MS.gene068250.t1 | MTR_7g015870 | 23.077 | 299 | 201 | 10 | 18 | 296 | 29 | 318 | 2.70e-14 | 72.4 |
| MS.gene068250.t1 | MTR_7g015870 | 23.985 | 271 | 177 | 10 | 18 | 268 | 25 | 286 | 3.44e-14 | 72.4 |
| MS.gene068250.t1 | MTR_4g018750 | 28.235 | 170 | 112 | 4 | 126 | 286 | 31 | 199 | 3.96e-14 | 71.6 |
| MS.gene068250.t1 | MTR_4g018750 | 24.906 | 265 | 171 | 8 | 11 | 258 | 10 | 263 | 2.97e-13 | 69.3 |
| MS.gene068250.t1 | MTR_8g076760 | 34.659 | 176 | 89 | 8 | 124 | 286 | 28 | 190 | 4.47e-14 | 71.6 |
| MS.gene068250.t1 | MTR_8g076760 | 25.887 | 282 | 184 | 9 | 31 | 292 | 29 | 305 | 2.07e-13 | 69.7 |
| MS.gene068250.t1 | MTR_7g066690 | 28.235 | 170 | 112 | 4 | 126 | 286 | 33 | 201 | 5.06e-14 | 71.6 |
| MS.gene068250.t1 | MTR_7g066690 | 22.924 | 301 | 200 | 7 | 16 | 297 | 17 | 304 | 2.16e-13 | 69.7 |
| MS.gene068250.t1 | MTR_6g034145 | 31.757 | 148 | 82 | 4 | 154 | 286 | 6 | 149 | 5.78e-14 | 70.9 |
| MS.gene068250.t1 | MTR_6g034145 | 24.615 | 260 | 164 | 7 | 53 | 292 | 5 | 252 | 1.69e-12 | 66.6 |
| MS.gene068250.t1 | MTR_4g005330 | 23.000 | 300 | 204 | 5 | 6 | 286 | 56 | 347 | 5.79e-14 | 72.0 |
| MS.gene068250.t1 | MTR_1g088995 | 28.740 | 254 | 157 | 9 | 31 | 273 | 48 | 288 | 8.16e-14 | 71.2 |
| MS.gene068250.t1 | MTR_5g032420 | 23.175 | 315 | 194 | 8 | 22 | 292 | 9 | 319 | 1.18e-13 | 70.9 |
| MS.gene068250.t1 | MTR_2g436930 | 23.404 | 329 | 200 | 8 | 4 | 292 | 8 | 324 | 1.54e-13 | 70.5 |
| MS.gene068250.t1 | MTR_2g098070 | 29.927 | 137 | 92 | 2 | 150 | 286 | 214 | 346 | 2.08e-13 | 70.1 |
| MS.gene068250.t1 | MTR_8g068890 | 22.654 | 309 | 196 | 7 | 22 | 292 | 9 | 312 | 2.56e-13 | 69.7 |
| MS.gene068250.t1 | MTR_8g068890 | 27.317 | 205 | 116 | 5 | 113 | 286 | 5 | 207 | 9.66e-12 | 65.1 |
| MS.gene068250.t1 | MTR_3g462140 | 30.409 | 171 | 108 | 4 | 126 | 286 | 31 | 200 | 3.70e-13 | 68.9 |
| MS.gene068250.t1 | MTR_3g462140 | 22.337 | 291 | 197 | 8 | 14 | 286 | 13 | 292 | 6.69e-11 | 62.4 |
| MS.gene068250.t1 | MTR_2g032610 | 23.827 | 277 | 185 | 7 | 31 | 287 | 44 | 314 | 1.12e-12 | 67.8 |
| MS.gene068250.t1 | MTR_4g119770 | 25.381 | 197 | 127 | 4 | 112 | 291 | 16 | 209 | 1.71e-12 | 66.6 |
| MS.gene068250.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 2.69e-12 | 65.9 |
| MS.gene068250.t1 | MTR_4g119770 | 22.956 | 318 | 189 | 8 | 24 | 292 | 15 | 325 | 2.96e-12 | 66.6 |
| MS.gene068250.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 4.76e-12 | 65.5 |
| MS.gene068250.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 5.91e-12 | 65.9 |
| MS.gene068250.t1 | MTR_5g081150 | 31.720 | 186 | 117 | 5 | 15 | 194 | 140 | 321 | 1.37e-11 | 64.7 |
| MS.gene068250.t1 | MTR_8g036880 | 29.927 | 137 | 92 | 2 | 150 | 286 | 251 | 383 | 8.64e-12 | 65.5 |
| MS.gene068250.t1 | MTR_3g028590 | 27.673 | 159 | 106 | 3 | 133 | 286 | 223 | 377 | 1.25e-11 | 65.1 |
| MS.gene068250.t1 | MTR_8g107270 | 24.390 | 246 | 166 | 6 | 51 | 286 | 63 | 298 | 1.26e-11 | 64.7 |
| MS.gene068250.t1 | MTR_3g028590 | 27.673 | 159 | 106 | 3 | 133 | 286 | 219 | 373 | 1.30e-11 | 65.1 |
| MS.gene068250.t1 | MTR_1g095780 | 26.299 | 308 | 182 | 13 | 6 | 299 | 515 | 791 | 2.59e-11 | 64.7 |
| MS.gene068250.t1 | MTR_2g436930 | 25.806 | 155 | 98 | 3 | 155 | 292 | 80 | 234 | 2.85e-11 | 62.8 |
| MS.gene068250.t1 | MTR_3g104810 | 23.776 | 286 | 181 | 7 | 18 | 268 | 36 | 319 | 4.61e-11 | 63.2 |
| MS.gene068250.t1 | MTR_4g005330 | 22.628 | 274 | 185 | 5 | 32 | 286 | 16 | 281 | 6.78e-11 | 62.4 |
| MS.gene068250.t1 | MTR_8g086070 | 25.654 | 191 | 131 | 4 | 4 | 192 | 15 | 196 | 7.93e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068250.t1 | AT1G79900 | 70.847 | 295 | 77 | 3 | 1 | 295 | 1 | 286 | 7.37e-142 | 402 |
| MS.gene068250.t1 | AT5G46800 | 34.237 | 295 | 169 | 7 | 14 | 288 | 6 | 295 | 1.21e-42 | 149 |
| MS.gene068250.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 2.19e-11 | 63.9 |
| MS.gene068250.t1 | AT5G46800 | 34.237 | 295 | 169 | 7 | 14 | 288 | 6 | 295 | 1.21e-42 | 149 |
| MS.gene068250.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 2.19e-11 | 63.9 |
| MS.gene068250.t1 | AT5G46800 | 34.237 | 295 | 169 | 7 | 14 | 288 | 6 | 295 | 1.21e-42 | 149 |
| MS.gene068250.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 2.19e-11 | 63.9 |
| MS.gene068250.t1 | AT2G33820 | 26.962 | 293 | 198 | 5 | 14 | 292 | 16 | 306 | 7.88e-36 | 131 |
| MS.gene068250.t1 | AT2G33820 | 26.578 | 301 | 197 | 7 | 14 | 292 | 16 | 314 | 1.21e-33 | 125 |
| MS.gene068250.t1 | AT1G34065 | 29.329 | 283 | 169 | 7 | 14 | 292 | 73 | 328 | 3.99e-26 | 105 |
| MS.gene068250.t1 | AT1G34065 | 28.421 | 285 | 169 | 7 | 14 | 292 | 80 | 335 | 5.17e-26 | 105 |
| MS.gene068250.t1 | AT4G11440 | 32.384 | 281 | 171 | 9 | 14 | 286 | 328 | 597 | 7.42e-26 | 107 |
| MS.gene068250.t1 | AT4G11440 | 32.384 | 281 | 171 | 9 | 14 | 286 | 328 | 597 | 7.42e-26 | 107 |
| MS.gene068250.t1 | AT2G33820 | 26.667 | 225 | 155 | 4 | 76 | 292 | 3 | 225 | 1.52e-25 | 102 |
| MS.gene068250.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.18e-24 | 101 |
| MS.gene068250.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.18e-24 | 101 |
| MS.gene068250.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.18e-24 | 101 |
| MS.gene068250.t1 | AT5G19760 | 26.667 | 300 | 192 | 7 | 14 | 304 | 16 | 296 | 2.28e-24 | 100 |
| MS.gene068250.t1 | AT5G01340 | 30.976 | 297 | 178 | 11 | 17 | 294 | 18 | 306 | 2.76e-24 | 100 |
| MS.gene068250.t1 | AT5G01340 | 29.767 | 215 | 120 | 7 | 97 | 297 | 5 | 202 | 1.95e-12 | 67.0 |
| MS.gene068250.t1 | AT2G33820 | 25.641 | 234 | 157 | 5 | 14 | 231 | 16 | 248 | 1.74e-23 | 97.4 |
| MS.gene068250.t1 | AT4G01100 | 32.889 | 225 | 132 | 8 | 88 | 297 | 12 | 232 | 1.23e-22 | 96.7 |
| MS.gene068250.t1 | AT4G01100 | 23.899 | 318 | 208 | 8 | 5 | 292 | 31 | 344 | 2.83e-19 | 87.0 |
| MS.gene068250.t1 | AT1G25380 | 28.058 | 278 | 175 | 7 | 32 | 292 | 37 | 306 | 2.12e-22 | 96.3 |
| MS.gene068250.t1 | AT1G25380 | 28.058 | 278 | 175 | 7 | 32 | 292 | 37 | 306 | 2.12e-22 | 96.3 |
| MS.gene068250.t1 | AT4G01100 | 30.962 | 239 | 132 | 8 | 88 | 297 | 12 | 246 | 4.61e-22 | 95.1 |
| MS.gene068250.t1 | AT4G01100 | 22.936 | 327 | 204 | 8 | 5 | 287 | 31 | 353 | 9.83e-19 | 85.9 |
| MS.gene068250.t1 | AT5G42130 | 27.719 | 285 | 176 | 10 | 32 | 302 | 134 | 402 | 7.07e-21 | 92.4 |
| MS.gene068250.t1 | AT3G20240 | 25.246 | 305 | 191 | 5 | 6 | 286 | 42 | 333 | 7.82e-21 | 91.7 |
| MS.gene068250.t1 | AT2G47490 | 29.577 | 284 | 167 | 11 | 32 | 295 | 33 | 303 | 1.23e-20 | 90.5 |
| MS.gene068250.t1 | AT4G01100 | 34.444 | 180 | 109 | 5 | 124 | 297 | 6 | 182 | 1.23e-20 | 90.5 |
| MS.gene068250.t1 | AT4G01100 | 24.904 | 261 | 166 | 7 | 53 | 287 | 33 | 289 | 1.61e-17 | 81.6 |
| MS.gene068250.t1 | AT4G32400 | 23.793 | 290 | 214 | 4 | 8 | 296 | 106 | 389 | 1.56e-20 | 91.3 |
| MS.gene068250.t1 | AT1G74240 | 28.803 | 309 | 186 | 8 | 14 | 295 | 34 | 335 | 4.35e-20 | 89.7 |
| MS.gene068250.t1 | AT1G14140 | 25.098 | 255 | 175 | 6 | 31 | 273 | 31 | 281 | 5.62e-20 | 88.6 |
| MS.gene068250.t1 | AT1G14140 | 27.830 | 212 | 141 | 6 | 94 | 296 | 1 | 209 | 3.02e-15 | 75.1 |
| MS.gene068250.t1 | AT5G51050 | 25.175 | 286 | 204 | 6 | 5 | 286 | 210 | 489 | 1.05e-19 | 89.4 |
| MS.gene068250.t1 | AT5G61810 | 26.199 | 271 | 177 | 8 | 5 | 267 | 52 | 307 | 8.95e-19 | 85.5 |
| MS.gene068250.t1 | AT5G61810 | 28.796 | 191 | 119 | 7 | 11 | 194 | 152 | 332 | 2.45e-11 | 63.9 |
| MS.gene068250.t1 | AT4G26180 | 25.510 | 294 | 193 | 9 | 13 | 287 | 18 | 304 | 1.55e-18 | 84.7 |
| MS.gene068250.t1 | AT4G26180 | 29.744 | 195 | 121 | 4 | 104 | 286 | 15 | 205 | 4.21e-16 | 77.8 |
| MS.gene068250.t1 | AT4G26180 | 26.374 | 273 | 175 | 9 | 14 | 267 | 19 | 284 | 1.99e-18 | 84.0 |
| MS.gene068250.t1 | AT4G26180 | 29.744 | 195 | 121 | 4 | 104 | 286 | 15 | 205 | 2.18e-16 | 78.2 |
| MS.gene068250.t1 | AT5G61810 | 26.199 | 271 | 177 | 8 | 5 | 267 | 195 | 450 | 4.32e-18 | 84.7 |
| MS.gene068250.t1 | AT5G61810 | 28.796 | 191 | 119 | 7 | 11 | 194 | 295 | 475 | 3.08e-11 | 64.3 |
| MS.gene068250.t1 | AT4G03115 | 28.395 | 243 | 155 | 8 | 31 | 266 | 53 | 283 | 5.07e-18 | 83.2 |
| MS.gene068250.t1 | AT4G03115 | 27.500 | 200 | 132 | 6 | 103 | 299 | 29 | 218 | 9.48e-13 | 68.2 |
| MS.gene068250.t1 | AT4G03115 | 28.395 | 243 | 155 | 8 | 31 | 266 | 85 | 315 | 8.10e-18 | 83.2 |
| MS.gene068250.t1 | AT4G03115 | 27.500 | 200 | 132 | 6 | 103 | 299 | 61 | 250 | 1.27e-12 | 67.8 |
| MS.gene068250.t1 | AT1G72820 | 24.127 | 315 | 204 | 7 | 16 | 297 | 31 | 343 | 2.30e-17 | 81.6 |
| MS.gene068250.t1 | AT1G72820 | 24.127 | 315 | 204 | 7 | 16 | 297 | 31 | 343 | 2.30e-17 | 81.6 |
| MS.gene068250.t1 | AT1G74240 | 28.082 | 292 | 176 | 8 | 31 | 295 | 3 | 287 | 3.85e-17 | 80.9 |
| MS.gene068250.t1 | AT3G54110 | 25.185 | 270 | 176 | 8 | 14 | 267 | 13 | 272 | 1.19e-16 | 79.3 |
| MS.gene068250.t1 | AT3G54110 | 30.319 | 188 | 108 | 5 | 126 | 304 | 31 | 204 | 8.55e-15 | 73.9 |
| MS.gene068250.t1 | AT2G37890 | 29.082 | 196 | 130 | 5 | 6 | 194 | 139 | 332 | 1.88e-16 | 79.0 |
| MS.gene068250.t1 | AT2G37890 | 25.497 | 302 | 190 | 9 | 14 | 292 | 43 | 332 | 1.86e-15 | 76.3 |
| MS.gene068250.t1 | AT2G37890 | 31.250 | 192 | 117 | 8 | 105 | 286 | 41 | 227 | 6.90e-15 | 74.3 |
| MS.gene068250.t1 | AT1G14560 | 25.180 | 278 | 179 | 8 | 32 | 286 | 43 | 314 | 2.75e-16 | 78.6 |
| MS.gene068250.t1 | AT1G14560 | 27.684 | 177 | 110 | 4 | 124 | 286 | 41 | 213 | 2.97e-11 | 63.5 |
| MS.gene068250.t1 | AT1G14560 | 25.869 | 259 | 163 | 8 | 32 | 267 | 43 | 295 | 3.84e-16 | 77.8 |
| MS.gene068250.t1 | AT5G58970 | 24.342 | 304 | 197 | 9 | 2 | 286 | 3 | 292 | 5.71e-16 | 77.4 |
| MS.gene068250.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 7.44e-16 | 76.3 |
| MS.gene068250.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 7.44e-16 | 76.3 |
| MS.gene068250.t1 | AT5G66380 | 26.689 | 296 | 189 | 10 | 18 | 292 | 12 | 300 | 8.43e-16 | 76.6 |
| MS.gene068250.t1 | AT3G55640 | 30.769 | 195 | 129 | 4 | 1 | 191 | 130 | 322 | 1.22e-15 | 76.6 |
| MS.gene068250.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 2.41e-15 | 75.9 |
| MS.gene068250.t1 | AT3G55640 | 30.769 | 195 | 129 | 4 | 1 | 191 | 130 | 322 | 1.22e-15 | 76.6 |
| MS.gene068250.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 2.41e-15 | 75.9 |
| MS.gene068250.t1 | AT4G03115 | 28.139 | 231 | 149 | 7 | 41 | 266 | 2 | 220 | 1.57e-15 | 75.1 |
| MS.gene068250.t1 | AT3G53940 | 29.787 | 188 | 114 | 4 | 111 | 286 | 74 | 255 | 1.72e-15 | 75.5 |
| MS.gene068250.t1 | AT3G53940 | 29.570 | 186 | 121 | 5 | 15 | 194 | 179 | 360 | 1.85e-15 | 76.3 |
| MS.gene068250.t1 | AT3G53940 | 29.787 | 188 | 114 | 4 | 111 | 286 | 74 | 255 | 3.83e-15 | 75.5 |
| MS.gene068250.t1 | AT4G03115 | 28.111 | 217 | 142 | 6 | 52 | 266 | 8 | 212 | 2.40e-15 | 74.7 |
| MS.gene068250.t1 | AT4G24570 | 24.916 | 297 | 177 | 8 | 14 | 273 | 4 | 291 | 5.42e-15 | 74.7 |
| MS.gene068250.t1 | AT4G24570 | 27.805 | 205 | 110 | 6 | 117 | 286 | 9 | 210 | 2.33e-12 | 67.0 |
| MS.gene068250.t1 | AT5G07320 | 24.364 | 275 | 195 | 5 | 14 | 286 | 207 | 470 | 4.88e-14 | 72.8 |
| MS.gene068250.t1 | AT5G07320 | 26.178 | 191 | 124 | 5 | 11 | 194 | 296 | 476 | 8.98e-13 | 68.9 |
| MS.gene068250.t1 | AT5G07320 | 29.167 | 168 | 109 | 4 | 125 | 292 | 224 | 381 | 1.22e-12 | 68.6 |
| MS.gene068250.t1 | AT1G07030 | 27.962 | 211 | 140 | 5 | 94 | 302 | 25 | 225 | 5.48e-14 | 71.6 |
| MS.gene068250.t1 | AT1G07030 | 26.148 | 283 | 175 | 9 | 2 | 266 | 24 | 290 | 2.50e-11 | 63.9 |
| MS.gene068250.t1 | AT5G58970 | 28.723 | 188 | 112 | 5 | 126 | 304 | 32 | 206 | 8.02e-14 | 70.5 |
| MS.gene068250.t1 | AT1G14560 | 26.667 | 195 | 120 | 5 | 111 | 286 | 26 | 216 | 1.58e-13 | 69.3 |
| MS.gene068250.t1 | AT5G13490 | 29.375 | 160 | 103 | 3 | 133 | 286 | 214 | 369 | 1.82e-13 | 70.5 |
| MS.gene068250.t1 | AT5G13490 | 29.375 | 160 | 103 | 3 | 133 | 286 | 214 | 369 | 1.82e-13 | 70.5 |
| MS.gene068250.t1 | AT5G09470 | 28.662 | 157 | 106 | 2 | 134 | 286 | 77 | 231 | 2.91e-13 | 69.7 |
| MS.gene068250.t1 | AT5G09470 | 24.891 | 229 | 163 | 5 | 48 | 273 | 91 | 313 | 1.44e-11 | 64.7 |
| MS.gene068250.t1 | AT4G03115 | 27.500 | 200 | 132 | 6 | 103 | 299 | 29 | 218 | 3.66e-13 | 68.2 |
| MS.gene068250.t1 | AT4G03115 | 27.500 | 200 | 132 | 6 | 103 | 299 | 29 | 218 | 3.90e-13 | 68.2 |
| MS.gene068250.t1 | AT2G39970 | 24.242 | 297 | 180 | 9 | 31 | 286 | 23 | 315 | 4.67e-13 | 68.9 |
| MS.gene068250.t1 | AT5G15640 | 23.297 | 279 | 182 | 9 | 14 | 268 | 18 | 288 | 5.20e-13 | 68.9 |
| MS.gene068250.t1 | AT5G15640 | 23.297 | 279 | 182 | 9 | 14 | 268 | 25 | 295 | 5.46e-13 | 68.9 |
| MS.gene068250.t1 | AT2G46320 | 25.000 | 228 | 124 | 6 | 110 | 290 | 25 | 252 | 2.00e-12 | 67.4 |
| MS.gene068250.t1 | AT2G30160 | 27.473 | 182 | 123 | 3 | 111 | 292 | 43 | 215 | 2.18e-12 | 67.0 |
| MS.gene068250.t1 | AT2G46320 | 29.452 | 146 | 95 | 3 | 153 | 290 | 8 | 153 | 2.27e-12 | 65.9 |
| MS.gene068250.t1 | AT2G46320 | 29.452 | 146 | 95 | 3 | 153 | 290 | 8 | 153 | 3.25e-12 | 65.9 |
| MS.gene068250.t1 | AT2G46320 | 29.452 | 146 | 95 | 3 | 153 | 290 | 8 | 153 | 3.25e-12 | 65.9 |
| MS.gene068250.t1 | AT2G46320 | 29.452 | 146 | 95 | 3 | 153 | 290 | 8 | 153 | 3.25e-12 | 65.9 |
| MS.gene068250.t1 | AT5G48970 | 25.238 | 210 | 139 | 4 | 110 | 304 | 22 | 228 | 4.38e-12 | 66.2 |
| MS.gene068250.t1 | AT5G48970 | 23.913 | 322 | 184 | 9 | 23 | 292 | 22 | 334 | 1.61e-11 | 64.7 |
| MS.gene068250.t1 | AT5G56450 | 23.000 | 200 | 140 | 5 | 111 | 297 | 35 | 233 | 1.35e-11 | 64.7 |
| MS.gene068250.t1 | AT3G21390 | 23.676 | 321 | 189 | 10 | 14 | 287 | 14 | 325 | 1.55e-11 | 64.7 |
| MS.gene068250.t1 | AT3G21390 | 26.882 | 186 | 124 | 4 | 117 | 291 | 26 | 210 | 1.75e-11 | 64.3 |
| MS.gene068250.t1 | AT3G21390 | 23.676 | 321 | 189 | 10 | 14 | 287 | 36 | 347 | 1.78e-11 | 64.7 |
| MS.gene068250.t1 | AT3G21390 | 26.882 | 186 | 124 | 4 | 117 | 291 | 48 | 232 | 2.35e-11 | 64.3 |
| MS.gene068250.t1 | AT3G51870 | 23.792 | 269 | 184 | 7 | 36 | 302 | 120 | 369 | 1.92e-11 | 64.7 |
| MS.gene068250.t1 | AT2G22500 | 22.727 | 308 | 198 | 8 | 22 | 295 | 9 | 310 | 3.13e-11 | 63.5 |
| MS.gene068250.t1 | AT5G64970 | 27.222 | 180 | 107 | 5 | 32 | 191 | 120 | 295 | 3.22e-11 | 63.5 |
| MS.gene068250.t1 | AT5G64970 | 27.222 | 180 | 107 | 5 | 32 | 191 | 244 | 419 | 9.57e-11 | 62.8 |
Find 67 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAAAAGCAGAACCATTT+TGG | 0.220455 | 4.4:+87394267 | None:intergenic |
| GGCACTGCTGGTATAATTTC+TGG | 0.229075 | 4.4:-87394332 | MS.gene068250:CDS |
| GTAAGGATAGAATGGATTTC+TGG | 0.274280 | 4.4:-87394409 | None:intergenic |
| GAATTTGTGGCTGGTGGATT+TGG | 0.305163 | 4.4:-87394356 | MS.gene068250:CDS |
| CTTTAGACAACATTTGTCTA+AGG | 0.317894 | 4.4:+87394243 | None:intergenic |
| TATAATTTCTGGTTATCCTT+TGG | 0.324296 | 4.4:-87394321 | MS.gene068250:CDS |
| CAACAAAGTGGTGGCCAAAA+TGG | 0.330381 | 4.4:-87394281 | MS.gene068250:CDS |
| GAGTTTCTTGCAAGTAGTTC+AGG | 0.334182 | 4.4:-87394383 | MS.gene068250:CDS |
| CCTGTGTTGTGGCGCGGTTT+AGG | 0.358076 | 4.4:-87392288 | MS.gene068250:CDS |
| CTCGTCTTCACAACATCAAA+AGG | 0.383330 | 4.4:+87392393 | None:intergenic |
| ACCTAATGCAACACTCTTGT+AGG | 0.402333 | 4.4:+87392755 | None:intergenic |
| GGTGGATTTGGAGGCACTGC+TGG | 0.406098 | 4.4:-87394344 | MS.gene068250:CDS |
| GCCAGAGCATTTGTTGTGAA+TGG | 0.409963 | 4.4:-87392255 | MS.gene068250:CDS |
| ACAAACCAGTCAAAAGAATC+TGG | 0.411503 | 4.4:-87392654 | MS.gene068250:CDS |
| AGACAAATGTTGTCTAAAGA+AGG | 0.414361 | 4.4:-87394239 | MS.gene068250:CDS |
| TTGGTGTCTGGAGGATTAGC+GGG | 0.424572 | 4.4:-87392441 | MS.gene068250:CDS |
| CGCGGCATATATCGAGGACT+TGG | 0.435598 | 4.4:-87392582 | MS.gene068250:CDS |
| GAGTGTTGCATTAGGTGGAA+TGG | 0.441365 | 4.4:-87392748 | MS.gene068250:CDS |
| TTGTTCTTTGTACCGTGGCA+TGG | 0.446647 | 4.4:-87394213 | MS.gene068250:CDS |
| TTGAATACTATGTTGGTGTC+TGG | 0.453435 | 4.4:-87392453 | MS.gene068250:CDS |
| TAGTTCAGGTAGAGAATTTG+TGG | 0.458521 | 4.4:-87394369 | MS.gene068250:CDS |
| CCGTGGCATGGGTGCACCAT+TGG | 0.479864 | 4.4:-87394201 | MS.gene068250:CDS |
| CAATGAAAACGTTCAAATGC+AGG | 0.490208 | 4.4:-87392187 | MS.gene068250:CDS |
| AGTGTTGCATTAGGTGGAAT+GGG | 0.491775 | 4.4:-87392747 | MS.gene068250:CDS |
| TCCTACAAGAGTGTTGCATT+AGG | 0.492774 | 4.4:-87392756 | MS.gene068250:CDS |
| ACGAAAAGCGTTAGAGAAGA+AGG | 0.501977 | 4.4:-87392315 | MS.gene068250:CDS |
| TGTTCTTTGTACCGTGGCAT+GGG | 0.502148 | 4.4:-87394212 | MS.gene068250:CDS |
| GGTAGAGAATTTGTGGCTGG+TGG | 0.502758 | 4.4:-87394362 | MS.gene068250:CDS |
| AGAAAGTTTGAATACTATGT+TGG | 0.504957 | 4.4:-87392460 | MS.gene068250:CDS |
| GTTGGTGTCTGGAGGATTAG+CGG | 0.505819 | 4.4:-87392442 | MS.gene068250:CDS |
| AAACATATGCAGTTCTCTCA+AGG | 0.505854 | 4.4:-87392815 | MS.gene068250:CDS |
| AAGTTTATTGCTTTCACCAG+TGG | 0.509839 | 4.4:-87392709 | MS.gene068250:CDS |
| ACCATTCACAACAAATGCTC+TGG | 0.512219 | 4.4:+87392254 | None:intergenic |
| CCTAAACCGCGCCACAACAC+AGG | 0.527341 | 4.4:+87392288 | None:intergenic |
| GAACTACTTGCAAGAAACTC+TGG | 0.529528 | 4.4:+87394386 | None:intergenic |
| GGATCTTTAGCAGAATCAGA+TGG | 0.534644 | 4.4:+87392783 | None:intergenic |
| TACAAGAGTGTTGCATTAGG+TGG | 0.540128 | 4.4:-87392753 | MS.gene068250:CDS |
| TTTGTGGCTGGTGGATTTGG+AGG | 0.542646 | 4.4:-87394353 | MS.gene068250:CDS |
| TCAGGTAGAGAATTTGTGGC+TGG | 0.550186 | 4.4:-87394365 | MS.gene068250:CDS |
| GCATTAGGTGGAATGGGCAC+AGG | 0.562056 | 4.4:-87392741 | MS.gene068250:CDS |
| ATGAGGGATATACCTTCTCA+TGG | 0.567380 | 4.4:-87392549 | MS.gene068250:CDS |
| GACTTGGCATCACTATAATG+AGG | 0.581438 | 4.4:-87392566 | MS.gene068250:CDS |
| CTAAACCGCGCCACAACACA+GGG | 0.586443 | 4.4:+87392289 | None:intergenic |
| AACATATGCAGTTCTCTCAA+GGG | 0.587290 | 4.4:-87392814 | MS.gene068250:CDS |
| TCGTCTTCACAACATCAAAA+GGG | 0.593439 | 4.4:+87392394 | None:intergenic |
| CCTTCTGCTATAAAATACAA+AGG | 0.598476 | 4.4:-87392354 | MS.gene068250:CDS |
| AATGCAACACTCTTGTAGGA+TGG | 0.603898 | 4.4:+87392759 | None:intergenic |
| GGATACCCTGTGTTGTGGCG+CGG | 0.610153 | 4.4:-87392294 | MS.gene068250:CDS |
| TGGTGTCTGGAGGATTAGCG+GGG | 0.610871 | 4.4:-87392440 | MS.gene068250:CDS |
| CCAATGGTGCACCCATGCCA+CGG | 0.611076 | 4.4:+87394201 | None:intergenic |
| GATCTTTAGCAGAATCAGAT+GGG | 0.611273 | 4.4:+87392784 | None:intergenic |
| AATACTATGTTGGTGTCTGG+AGG | 0.616080 | 4.4:-87392450 | MS.gene068250:CDS |
| AAGAAGGATACCCTGTGTTG+TGG | 0.621789 | 4.4:-87392299 | MS.gene068250:CDS |
| TTAGGTGGAATGGGCACAGG+AGG | 0.622016 | 4.4:-87392738 | MS.gene068250:CDS |
| TCTGGACATATGAATACATG+AGG | 0.629048 | 4.4:-87392518 | MS.gene068250:CDS |
| GCAACACTCTTGTAGGATGG+AGG | 0.631532 | 4.4:+87392762 | None:intergenic |
| ACTTGGCATCACTATAATGA+GGG | 0.646915 | 4.4:-87392565 | MS.gene068250:CDS |
| CTTAGAATCAGACAACAAAG+TGG | 0.668062 | 4.4:-87394293 | MS.gene068250:CDS |
| TGGAGAAAAGAGGGTTTGCG+CGG | 0.668379 | 4.4:-87392600 | MS.gene068250:CDS |
| AGAATCAGACAACAAAGTGG+TGG | 0.674748 | 4.4:-87394290 | MS.gene068250:CDS |
| CTGATTCTAAGAGTATCCAA+AGG | 0.682126 | 4.4:+87394305 | None:intergenic |
| GGTTTGCGCGGCATATATCG+AGG | 0.692095 | 4.4:-87392588 | MS.gene068250:CDS |
| CTGGACATATGAATACATGA+GGG | 0.692763 | 4.4:-87392517 | MS.gene068250:CDS |
| TGAAAAGTAACTGATGCCAA+TGG | 0.710784 | 4.4:+87394185 | None:intergenic |
| GTGGCGCGGTTTAGGAACTG+CGG | 0.716540 | 4.4:-87392280 | MS.gene068250:CDS |
| GGTGTCTGGAGGATTAGCGG+GGG | 0.720060 | 4.4:-87392439 | MS.gene068250:CDS |
| CTGCTTATGAGATTACACTG+AGG | 0.757246 | 4.4:-87392221 | MS.gene068250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATATTTATAATTACCT+AGG | - | chr4.4:87393250-87393269 | MS.gene068250:intron | 15.0% |
| !! | ATGATATGATTTATTGTTTA+TGG | - | chr4.4:87392483-87392502 | MS.gene068250:CDS | 15.0% |
| !! | TAATTATAAATATTCTTTGC+TGG | + | chr4.4:87393247-87393266 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATCTTCGTTTTT+CGG | - | chr4.4:87393714-87393733 | MS.gene068250:intron | 15.0% |
| !! | AAGAAAAGAAAAGAAAAAAG+TGG | - | chr4.4:87392789-87392808 | MS.gene068250:CDS | 20.0% |
| !! | ACGAAAATTGTCTAAATATT+TGG | - | chr4.4:87393558-87393577 | MS.gene068250:intron | 20.0% |
| !! | ATATTTAATATTGCTTGAGT+TGG | + | chr4.4:87393032-87393051 | None:intergenic | 20.0% |
| !! | ATATTTGTGTAAACTCATAT+TGG | - | chr4.4:87392929-87392948 | MS.gene068250:intron | 20.0% |
| !! | ATTAGGATTAGATTAAGATT+AGG | - | chr4.4:87392981-87393000 | MS.gene068250:intron | 20.0% |
| !! | ATTTGTTTAGATAAAGGATT+AGG | - | chr4.4:87392964-87392983 | MS.gene068250:intron | 20.0% |
| !! | TAAAAGTAGCTAAAAACATA+TGG | - | chr4.4:87393954-87393973 | MS.gene068250:intron | 20.0% |
| !!! | AAATATTTAGACAATTTTCG+TGG | + | chr4.4:87393559-87393578 | None:intergenic | 20.0% |
| !!! | CTTTTGATTTGTTTAGATAA+AGG | - | chr4.4:87392958-87392977 | MS.gene068250:intron | 20.0% |
| ! | AAAAACATATGGAGAAAAGA+GGG | - | chr4.4:87393965-87393984 | MS.gene068250:intron | 25.0% |
| ! | AGAAAGTTTGAATACTATGT+TGG | - | chr4.4:87394114-87394133 | MS.gene068250:intron | 25.0% |
| ! | CACTTTAATATCTCATATGA+AGG | + | chr4.4:87393663-87393682 | None:intergenic | 25.0% |
| ! | TAAAAACATATGGAGAAAAG+AGG | - | chr4.4:87393964-87393983 | MS.gene068250:intron | 25.0% |
| ! | TATCTACATATGAAGTTTGT+GGG | - | chr4.4:87393422-87393441 | MS.gene068250:intron | 25.0% |
| ! | TCTCATATGAAGGAATAATA+TGG | + | chr4.4:87393653-87393672 | None:intergenic | 25.0% |
| ! | TGAAATAGAATTGATCTATG+TGG | + | chr4.4:87393593-87393612 | None:intergenic | 25.0% |
| ! | TTATCTACATATGAAGTTTG+TGG | - | chr4.4:87393421-87393440 | MS.gene068250:intron | 25.0% |
| !!! | ATGTTTTTAGCTACTTTTAC+AGG | + | chr4.4:87393953-87393972 | None:intergenic | 25.0% |
| !!! | TATAATTTCTGGTTATCCTT+TGG | - | chr4.4:87392253-87392272 | MS.gene068250:CDS | 25.0% |
| AAAAAAGTGGCTGATATGAT+AGG | - | chr4.4:87392802-87392821 | MS.gene068250:CDS | 30.0% | |
| AGACAAATGTTGTCTAAAGA+AGG | - | chr4.4:87392335-87392354 | MS.gene068250:CDS | 30.0% | |
| ATCATCACAAATTGCAGTAT+AGG | - | chr4.4:87392597-87392616 | MS.gene068250:CDS | 30.0% | |
| CCTTCTGCTATAAAATACAA+AGG | - | chr4.4:87394220-87394239 | MS.gene068250:CDS | 30.0% | |
| CTTTAGACAACATTTGTCTA+AGG | + | chr4.4:87392334-87392353 | None:intergenic | 30.0% | |
| TATTGCAACAATCAAAGAAG+TGG | - | chr4.4:87393484-87393503 | MS.gene068250:intron | 30.0% | |
| TGATGCATCATCTAATTGAA+TGG | + | chr4.4:87393280-87393299 | None:intergenic | 30.0% | |
| ! | AACAGTGCTTTTGTATATTC+TGG | - | chr4.4:87393343-87393362 | MS.gene068250:intron | 30.0% |
| ! | ACAGTGCTTTTGTATATTCT+GGG | - | chr4.4:87393344-87393363 | MS.gene068250:intron | 30.0% |
| ! | ATAGGAATCGTTTGTGATTT+TGG | - | chr4.4:87392820-87392839 | MS.gene068250:CDS | 30.0% |
| ! | CCTTTGTATTTTATAGCAGA+AGG | + | chr4.4:87394223-87394242 | None:intergenic | 30.0% |
| ! | GAACGTTTTCATTGTTAAAC+AGG | + | chr4.4:87394381-87394400 | None:intergenic | 30.0% |
| ! | TAGGAATCGTTTGTGATTTT+GGG | - | chr4.4:87392821-87392840 | MS.gene068250:CDS | 30.0% |
| ! | TGTTAAAAGCAGAACCATTT+TGG | + | chr4.4:87392310-87392329 | None:intergenic | 30.0% |
| !! | ATATTGCTTGAGTTGGAAAA+AGG | + | chr4.4:87393025-87393044 | None:intergenic | 30.0% |
| !! | TTTTTATCTTCGTTTTTCGG+TGG | - | chr4.4:87393717-87393736 | MS.gene068250:intron | 30.0% |
| AAAACATCCTTTGCCATCTT+TGG | - | chr4.4:87392712-87392731 | MS.gene068250:CDS | 35.0% | |
| AAAACTGTACGACTGTTACA+TGG | - | chr4.4:87393123-87393142 | MS.gene068250:intron | 35.0% | |
| AAACATATGCAGTTCTCTCA+AGG | - | chr4.4:87393759-87393778 | MS.gene068250:intron | 35.0% | |
| AAACTGTACGACTGTTACAT+GGG | - | chr4.4:87393124-87393143 | MS.gene068250:intron | 35.0% | |
| AACATATGCAGTTCTCTCAA+GGG | - | chr4.4:87393760-87393779 | MS.gene068250:intron | 35.0% | |
| AAGTTTATTGCTTTCACCAG+TGG | - | chr4.4:87393865-87393884 | MS.gene068250:intron | 35.0% | |
| AATAGCCTTTGAATGCCTTA+TGG | + | chr4.4:87393468-87393487 | None:intergenic | 35.0% | |
| ACAAACCAGTCAAAAGAATC+TGG | - | chr4.4:87393920-87393939 | MS.gene068250:intron | 35.0% | |
| ACTGTATCCATACCATAGTA+GGG | + | chr4.4:87393087-87393106 | None:intergenic | 35.0% | |
| ACTTGGCATCACTATAATGA+GGG | - | chr4.4:87394009-87394028 | MS.gene068250:intron | 35.0% | |
| ATCCGGCATAAATCATCAAT+TGG | - | chr4.4:87392525-87392544 | MS.gene068250:CDS | 35.0% | |
| CAATGAAAACGTTCAAATGC+AGG | - | chr4.4:87394387-87394406 | MS.gene068250:CDS | 35.0% | |
| CACTGTTCATGTCATTGTAT+TGG | + | chr4.4:87393330-87393349 | None:intergenic | 35.0% | |
| CAGAAGTAAAAACCATGAGA+AGG | + | chr4.4:87394040-87394059 | None:intergenic | 35.0% | |
| CTGGACATATGAATACATGA+GGG | - | chr4.4:87394057-87394076 | MS.gene068250:intron | 35.0% | |
| CTTAGAATCAGACAACAAAG+TGG | - | chr4.4:87392281-87392300 | MS.gene068250:CDS | 35.0% | |
| GAACATCAAGAATCCAAAGA+TGG | + | chr4.4:87392728-87392747 | None:intergenic | 35.0% | |
| GATCTTTAGCAGAATCAGAT+GGG | + | chr4.4:87393793-87393812 | None:intergenic | 35.0% | |
| GATGTTCTTTGAATCTCTGA+TGG | - | chr4.4:87392741-87392760 | MS.gene068250:CDS | 35.0% | |
| TACTGTATCCATACCATAGT+AGG | + | chr4.4:87393088-87393107 | None:intergenic | 35.0% | |
| TAGTTCAGGTAGAGAATTTG+TGG | - | chr4.4:87392205-87392224 | MS.gene068250:CDS | 35.0% | |
| TCCGGCATAAATCATCAATT+GGG | - | chr4.4:87392526-87392545 | MS.gene068250:CDS | 35.0% | |
| TCGTCTTCACAACATCAAAA+GGG | + | chr4.4:87394183-87394202 | None:intergenic | 35.0% | |
| TCTAATTGAATGGACATCCT+AGG | + | chr4.4:87393270-87393289 | None:intergenic | 35.0% | |
| TCTGGACATATGAATACATG+AGG | - | chr4.4:87394056-87394075 | MS.gene068250:intron | 35.0% | |
| TGAAAAGTAACTGATGCCAA+TGG | + | chr4.4:87392392-87392411 | None:intergenic | 35.0% | |
| ! | ACCCAATTGATGATTTATGC+CGG | + | chr4.4:87392530-87392549 | None:intergenic | 35.0% |
| ! | AGGAATCGTTTGTGATTTTG+GGG | - | chr4.4:87392822-87392841 | MS.gene068250:CDS | 35.0% |
| ! | ATGTCATTGTATTGGTAGGT+GGG | + | chr4.4:87393322-87393341 | None:intergenic | 35.0% |
| ! | CTTCTCATGGTTTTTACTTC+TGG | - | chr4.4:87394038-87394057 | MS.gene068250:intron | 35.0% |
| ! | GCTTTTGTATATTCTGGGTA+TGG | - | chr4.4:87393349-87393368 | MS.gene068250:intron | 35.0% |
| ! | GTTCATGTCATTGTATTGGT+AGG | + | chr4.4:87393326-87393345 | None:intergenic | 35.0% |
| ! | TATAGCCATAAGGCATTCAA+AGG | - | chr4.4:87393460-87393479 | MS.gene068250:intron | 35.0% |
| ! | TTGAATACTATGTTGGTGTC+TGG | - | chr4.4:87394121-87394140 | MS.gene068250:intron | 35.0% |
| ! | TTGTTCCAGATTCTTTTGAC+TGG | + | chr4.4:87393928-87393947 | None:intergenic | 35.0% |
| !! | CTGATTCTAAGAGTATCCAA+AGG | + | chr4.4:87392272-87392291 | None:intergenic | 35.0% |
| !!! | ATTGGCATCAGTTACTTTTC+AGG | - | chr4.4:87392391-87392410 | MS.gene068250:CDS | 35.0% |
| AATGCAACACTCTTGTAGGA+TGG | + | chr4.4:87393818-87393837 | None:intergenic | 40.0% | |
| ACCATTCACAACAAATGCTC+TGG | + | chr4.4:87394323-87394342 | None:intergenic | 40.0% | |
| ACCTAATGCAACACTCTTGT+AGG | + | chr4.4:87393822-87393841 | None:intergenic | 40.0% | |
| AGAATCAGACAACAAAGTGG+TGG | - | chr4.4:87392284-87392303 | MS.gene068250:CDS | 40.0% | |
| AGTGTTGCATTAGGTGGAAT+GGG | - | chr4.4:87393827-87393846 | MS.gene068250:intron | 40.0% | |
| ATGAGGGAAAAATTGCATCC+AGG | - | chr4.4:87394073-87394092 | MS.gene068250:intron | 40.0% | |
| ATGAGGGATATACCTTCTCA+TGG | - | chr4.4:87394025-87394044 | MS.gene068250:intron | 40.0% | |
| CAAGAATCCAAAGATGGCAA+AGG | + | chr4.4:87392722-87392741 | None:intergenic | 40.0% | |
| CATCCAGGTTGTAGAAAAAG+TGG | - | chr4.4:87394088-87394107 | MS.gene068250:intron | 40.0% | |
| CTCGTCTTCACAACATCAAA+AGG | + | chr4.4:87394184-87394203 | None:intergenic | 40.0% | |
| CTGCTTATGAGATTACACTG+AGG | - | chr4.4:87394353-87394372 | MS.gene068250:CDS | 40.0% | |
| CTGGGTTATGTATAGCCATA+AGG | - | chr4.4:87393450-87393469 | MS.gene068250:intron | 40.0% | |
| CTGTATCCATACCATAGTAG+GGG | + | chr4.4:87393086-87393105 | None:intergenic | 40.0% | |
| GAACTACTTGCAAGAAACTC+TGG | + | chr4.4:87392191-87392210 | None:intergenic | 40.0% | |
| GAATCACATTCACATCACAC+AGG | + | chr4.4:87393150-87393169 | None:intergenic | 40.0% | |
| GACTTGGCATCACTATAATG+AGG | - | chr4.4:87394008-87394027 | MS.gene068250:intron | 40.0% | |
| GAGTTTCTTGCAAGTAGTTC+AGG | - | chr4.4:87392191-87392210 | MS.gene068250:CDS | 40.0% | |
| GGATCTTTAGCAGAATCAGA+TGG | + | chr4.4:87393794-87393813 | None:intergenic | 40.0% | |
| TATGGCTATACATAACCCAG+TGG | + | chr4.4:87393450-87393469 | None:intergenic | 40.0% | |
| TCAACATGATGTTGCATGTG+TGG | - | chr4.4:87392679-87392698 | MS.gene068250:CDS | 40.0% | |
| ! | AATACTATGTTGGTGTCTGG+AGG | - | chr4.4:87394124-87394143 | MS.gene068250:intron | 40.0% |
| ! | AATCTCTGATGGATGCGATT+TGG | - | chr4.4:87392752-87392771 | MS.gene068250:CDS | 40.0% |
| ! | CATGTCATTGTATTGGTAGG+TGG | + | chr4.4:87393323-87393342 | None:intergenic | 40.0% |
| ! | GGTTTTTGTTCTTTGTACCG+TGG | - | chr4.4:87392356-87392375 | MS.gene068250:CDS | 40.0% |
| ! | GTTGATAAGATCCTTCGATC+CGG | - | chr4.4:87392508-87392527 | MS.gene068250:CDS | 40.0% |
| ! | TATTTTCACATGAGCCAGTG+AGG | - | chr4.4:87393049-87393068 | MS.gene068250:intron | 40.0% |
| !! | ACGAAAAGCGTTAGAGAAGA+AGG | - | chr4.4:87394259-87394278 | MS.gene068250:CDS | 40.0% |
| !! | CGAATTTTGATCAACTCCAC+TGG | + | chr4.4:87393884-87393903 | None:intergenic | 40.0% |
| !! | TACAAGAGTGTTGCATTAGG+TGG | - | chr4.4:87393821-87393840 | MS.gene068250:intron | 40.0% |
| !! | TCCTACAAGAGTGTTGCATT+AGG | - | chr4.4:87393818-87393837 | MS.gene068250:intron | 40.0% |
| !!! | TGACCACTTTTTCTACAACC+TGG | + | chr4.4:87394094-87394113 | None:intergenic | 40.0% |
| AAGAAGGATACCCTGTGTTG+TGG | - | chr4.4:87394275-87394294 | MS.gene068250:CDS | 45.0% | |
| CAACAAAGTGGTGGCCAAAA+TGG | - | chr4.4:87392293-87392312 | MS.gene068250:CDS | 45.0% | |
| CTGAATCCCCTACTATGGTA+TGG | - | chr4.4:87393077-87393096 | MS.gene068250:intron | 45.0% | |
| GATGATTTATGCCGGATCGA+AGG | + | chr4.4:87392522-87392541 | None:intergenic | 45.0% | |
| GGCACTGCTGGTATAATTTC+TGG | - | chr4.4:87392242-87392261 | MS.gene068250:CDS | 45.0% | |
| TCAGGTAGAGAATTTGTGGC+TGG | - | chr4.4:87392209-87392228 | MS.gene068250:CDS | 45.0% | |
| TGGATCTGAATCCCCTACTA+TGG | - | chr4.4:87393072-87393091 | MS.gene068250:intron | 45.0% | |
| TGTTCTTTGTACCGTGGCAT+GGG | - | chr4.4:87392362-87392381 | MS.gene068250:CDS | 45.0% | |
| TTGTTCTTTGTACCGTGGCA+TGG | - | chr4.4:87392361-87392380 | MS.gene068250:CDS | 45.0% | |
| ! | GAGTGTTGCATTAGGTGGAA+TGG | - | chr4.4:87393826-87393845 | MS.gene068250:intron | 45.0% |
| !! | GAATTTGTGGCTGGTGGATT+TGG | - | chr4.4:87392218-87392237 | MS.gene068250:CDS | 45.0% |
| !! | GCCAGAGCATTTGTTGTGAA+TGG | - | chr4.4:87394319-87394338 | MS.gene068250:CDS | 45.0% |
| !! | ACAAATATAAAATTAATAAA+AGG | + | chr4.4:87392917-87392936 | None:intergenic | 5.0% |
| !!! | TAATATTAATTTTTTAGATA+TGG | - | chr4.4:87392636-87392655 | MS.gene068250:CDS | 5.0% |
| !!! | TAATTATTGTTTTTTTTAAT+TGG | - | chr4.4:87392862-87392881 | MS.gene068250:intron | 5.0% |
| GCAACACTCTTGTAGGATGG+AGG | + | chr4.4:87393815-87393834 | None:intergenic | 50.0% | |
| GGTAGAGAATTTGTGGCTGG+TGG | - | chr4.4:87392212-87392231 | MS.gene068250:CDS | 50.0% | |
| TGGAGAAAAGAGGGTTTGCG+CGG | - | chr4.4:87393974-87393993 | MS.gene068250:intron | 50.0% | |
| TTTCACATGAGCCAGTGAGG+TGG | - | chr4.4:87393052-87393071 | MS.gene068250:intron | 50.0% | |
| ! | ATGAAGTTTGTGGGTGCCAC+TGG | - | chr4.4:87393431-87393450 | MS.gene068250:intron | 50.0% |
| ! | GTTGGTGTCTGGAGGATTAG+CGG | - | chr4.4:87394132-87394151 | MS.gene068250:intron | 50.0% |
| ! | TTGGTGTCTGGAGGATTAGC+GGG | - | chr4.4:87394133-87394152 | MS.gene068250:intron | 50.0% |
| ! | TTTTCGGTGGCAGAATGCTG+TGG | - | chr4.4:87393730-87393749 | MS.gene068250:intron | 50.0% |
| !! | TGAAGTTTGTGGGTGCCACT+GGG | - | chr4.4:87393432-87393451 | MS.gene068250:intron | 50.0% |
| !! | TTTGTGGCTGGTGGATTTGG+AGG | - | chr4.4:87392221-87392240 | MS.gene068250:CDS | 50.0% |
| CGCGGCATATATCGAGGACT+TGG | - | chr4.4:87393992-87394011 | MS.gene068250:intron | 55.0% | |
| CTAAACCGCGCCACAACACA+GGG | + | chr4.4:87394288-87394307 | None:intergenic | 55.0% | |
| GCATTAGGTGGAATGGGCAC+AGG | - | chr4.4:87393833-87393852 | MS.gene068250:intron | 55.0% | |
| GGGATTCAGATCCACCTCAC+TGG | + | chr4.4:87393066-87393085 | None:intergenic | 55.0% | |
| GGTTTGCGCGGCATATATCG+AGG | - | chr4.4:87393986-87394005 | MS.gene068250:intron | 55.0% | |
| TTAGGTGGAATGGGCACAGG+AGG | - | chr4.4:87393836-87393855 | MS.gene068250:intron | 55.0% | |
| ! | TGGTGTCTGGAGGATTAGCG+GGG | - | chr4.4:87394134-87394153 | MS.gene068250:intron | 55.0% |
| ATTAGCGGGGGTAGCGAGCT+GGG | - | chr4.4:87394147-87394166 | MS.gene068250:intron | 60.0% | |
| CCAATGGTGCACCCATGCCA+CGG | + | chr4.4:87392376-87392395 | None:intergenic | 60.0% | |
| CCTAAACCGCGCCACAACAC+AGG | + | chr4.4:87394289-87394308 | None:intergenic | 60.0% | |
| CCTGTGTTGTGGCGCGGTTT+AGG | - | chr4.4:87394286-87394305 | MS.gene068250:CDS | 60.0% | |
| GGATACCCTGTGTTGTGGCG+CGG | - | chr4.4:87394280-87394299 | MS.gene068250:CDS | 60.0% | |
| GTGGCGCGGTTTAGGAACTG+CGG | - | chr4.4:87394294-87394313 | MS.gene068250:CDS | 60.0% | |
| ! | GGTGTCTGGAGGATTAGCGG+GGG | - | chr4.4:87394135-87394154 | MS.gene068250:intron | 60.0% |
| !! | GGTGGATTTGGAGGCACTGC+TGG | - | chr4.4:87392230-87392249 | MS.gene068250:CDS | 60.0% |
| CCGTGGCATGGGTGCACCAT+TGG | - | chr4.4:87392373-87392392 | MS.gene068250:CDS | 65.0% | |
| GATTAGCGGGGGTAGCGAGC+TGG | - | chr4.4:87394146-87394165 | MS.gene068250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 87392176 | 87394420 | 87392176 | ID=MS.gene068250 |
| chr4.4 | mRNA | 87392176 | 87394420 | 87392176 | ID=MS.gene068250.t1;Parent=MS.gene068250 |
| chr4.4 | exon | 87394184 | 87394420 | 87394184 | ID=MS.gene068250.t1.exon1;Parent=MS.gene068250.t1 |
| chr4.4 | CDS | 87394184 | 87394420 | 87394184 | ID=cds.MS.gene068250.t1;Parent=MS.gene068250.t1 |
| chr4.4 | exon | 87392176 | 87392853 | 87392176 | ID=MS.gene068250.t1.exon2;Parent=MS.gene068250.t1 |
| chr4.4 | CDS | 87392176 | 87392853 | 87392176 | ID=cds.MS.gene068250.t1;Parent=MS.gene068250.t1 |
| Gene Sequence |
| Protein sequence |
